Rh2BG107500

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Forward (+)
9099680 .. 9100761
1082 bp
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UTR
Exon/CDS
Intron
Rh2BG107500.1

Sequence Viewer

Length: 204 bp
ATGTTTGACATAGCTCTTCAGCGCTTCCAAACCGGGCATGGAAAAGGATTTCCAACTCATTTCTCCCAGATAGGGGCTCCTGACTTCTATACCATTCAAAGGCCGACAAGCCAACTTCAAGGATGCTATAAACATAGACATGCCAAAATACTGCAACCATCAAGTAAAGATGCGGCCTCAAGTAAGGCCTTGATTAGAATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

67

Amino Acids

7.53

Weight (kDa)

10.13

Isoelectric Point (pI)

49.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015812)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 173
AcsI RAATTY 1 cut(s) 198
AfeI AGCGCT 1 cut(s) 23
AfiI CCNNNNNNNGG 3 cut(s) 72, 73, 99
AgsI TTSAA 2 cut(s) 98, 119
AluBI AGCT 1 cut(s) 14
AluI AGCT 1 cut(s) 14
Aor51HI AGCGCT 1 cut(s) 23
AoxI GGCC 3 cut(s) 101, 174, 186
ApoI RAATTY 1 cut(s) 198
AspLEI GCGC 1 cut(s) 24
AsuC2I CCSGG 1 cut(s) 34
BanII GRGCYC 1 cut(s) 79
BccI CCATC 1 cut(s) 166
BcnI CCSGG 1 cut(s) 34
BfoI RGCGCY 1 cut(s) 25
BisI GCNGC 1 cut(s) 174
BlsI GCNGC 1 cut(s) 175
Bme1390I CCNGG 1 cut(s) 34
BmiI GGNNCC 1 cut(s) 78
BmrFI CCNGG 1 cut(s) 34
BmsI GCATC 2 cut(s) 113, 160
BpuEI CTTGAG 1 cut(s) 163
BpuMI CCSGG 1 cut(s) 34
Bsc4I CCNNNNNNNGG 3 cut(s) 72, 73, 99
BseGI GGATG 1 cut(s) 128
BseLI CCNNNNNNNGG 3 cut(s) 72, 73, 99
BshFI GGCC 3 cut(s) 103, 176, 188
BsiSI CCGG 1 cut(s) 33
BslI CCNNNNNNNGG 3 cut(s) 72, 73, 99
BsnI GGCC 3 cut(s) 103, 176, 188
Bsp1286I GDGCHC 1 cut(s) 79
BspACI CCGC 1 cut(s) 173
BspANI GGCC 3 cut(s) 103, 176, 188
BspLI GGNNCC 1 cut(s) 78
BspQI GCTCTTC 1 cut(s) 21
Bst6I CTCTTC 1 cut(s) 21
BstF5I GGATG 1 cut(s) 128
BstH2I RGCGCY 1 cut(s) 25
BstHHI GCGC 1 cut(s) 24
BstNSI RCATGY 1 cut(s) 143
BstSCI CCNGG 1 cut(s) 32
BsuRI GGCC 3 cut(s) 103, 176, 188
BtsCI GGATG 1 cut(s) 128
CfoI GCGC 1 cut(s) 24
CviAII CATG 2 cut(s) 38, 140
CviJI RGCY 6 cut(s) 14, 77, 103, 111, 176, 188
CviKI_1 RGCY 6 cut(s) 14, 77, 103, 111, 176, 188
Eam1104I CTCTTC 1 cut(s) 21
EarI CTCTTC 1 cut(s) 21
Eco147I AGGCCT 1 cut(s) 188
Eco24I GRGCYC 1 cut(s) 79
Eco47III AGCGCT 1 cut(s) 23
EcoT38I GRGCYC 1 cut(s) 79
FaeI CATG 2 cut(s) 41, 143
FaiI YATR 6 cut(s) 11, 39, 90, 129, 135, 141
FatI CATG 2 cut(s) 37, 139
Fnu4HI GCNGC 1 cut(s) 174
FokI GGATG 1 cut(s) 135
FriOI GRGCYC 1 cut(s) 79
Fsp4HI GCNGC 1 cut(s) 174
GlaI GCGC 1 cut(s) 23
GluI GCNGC 1 cut(s) 174
HaeII RGCGCY 1 cut(s) 25
HaeIII GGCC 3 cut(s) 103, 176, 188
HapII CCGG 1 cut(s) 33
HhaI GCGC 1 cut(s) 24
Hin1II CATG 2 cut(s) 41, 143
Hin6I GCGC 1 cut(s) 22
HinP1I GCGC 1 cut(s) 22
HpaII CCGG 1 cut(s) 33
Hpy188III TCNNGA 1 cut(s) 80
HpyCH4V TGCA 1 cut(s) 154
Hsp92II CATG 2 cut(s) 41, 143
HspAI GCGC 1 cut(s) 22
LguI GCTCTTC 1 cut(s) 21
LmnI GCTCC 1 cut(s) 82
LpnPI CCDG 3 cut(s) 46, 80, 93
LweI GCATC 2 cut(s) 113, 160
MboII GAAGA 1 cut(s) 8
MhlI GDGCHC 1 cut(s) 79
MluCI AATT 1 cut(s) 198
MmeI TCCRAC 1 cut(s) 77
MnlI CCTC 1 cut(s) 187
MslI CAYNNNNRTG 1 cut(s) 138
MspI CCGG 1 cut(s) 33
MspR9I CCNGG 1 cut(s) 34
NciI CCSGG 1 cut(s) 34
NlaIII CATG 2 cut(s) 41, 143
NlaIV GGNNCC 1 cut(s) 78
NspI RCATGY 1 cut(s) 143
PceI AGGCCT 1 cut(s) 188
PciSI GCTCTTC 1 cut(s) 21
PkrI GCNGC 1 cut(s) 175
PspN4I GGNNCC 1 cut(s) 78
RseI CAYNNNNRTG 1 cut(s) 138
SapI GCTCTTC 1 cut(s) 21
SatI GCNGC 1 cut(s) 174
ScrFI CCNGG 1 cut(s) 34
SduI GDGCHC 1 cut(s) 79
SetI ASST 1 cut(s) 16
SfaNI GCATC 2 cut(s) 113, 160
SmiMI CAYNNNNRTG 1 cut(s) 138
SmlI CTYRAG 1 cut(s) 178
SmoI CTYRAG 1 cut(s) 178
Sse9I AATT 1 cut(s) 198
SseBI AGGCCT 1 cut(s) 188
SsiI CCGC 1 cut(s) 173
StuI AGGCCT 1 cut(s) 188
StyD4I CCNGG 1 cut(s) 32
TasI AATT 1 cut(s) 198
TauI GCSGC 1 cut(s) 176
XapI RAATTY 1 cut(s) 198
XceI RCATGY 1 cut(s) 143
XcmI CCANNNNNNNNNTGG 1 cut(s) 35
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.