RLG00000000081

NADH dehydrogenase (quinone) activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Unknown
OG0015812
Physical Location & Seq
Forward (+)
434473 .. 438152
3680 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000000081

Sequence Viewer

Length: 2043 bp
ATGGCTTTTTGGTCCCTTTCGTCCAGTGGTAAGGACATCGTCTTTTCATGTCGAAGACACGGGTTCGATTCCCGGAAACCGTATCCAAGCTCCGTGGCAAGTCTGCGCTCTTTGGACTTTTCAAACTGGGCTAATGTTTCTGTGCGGGGGAACAATACCCGGAGCAACGACCCCAACAGTTTGGAAGAGATTTTGAGAAAAGGTTTTAGTACCGGTGTATCCTATATGTACTCTAGTTTATTCGAAGTGGCAAAATGGTGTAACGTCGTCGACTTATTGGGAAAAGGGAAGAAATTATTGGGAAAAGGGAAGAAAATGCGCTGGGACTACTCCAGTTTATTTGAAGTCGCAAAATGGTGTAACGCCATTTTCCGGCGCTTTATCTTCCTTTCTTTCCTCGCAAAGGGGCTGTGTGCCCTTTTCTCGACTTTTTTTTGCCTTCTTTTGTCGCCGGAATGGAGCGGGTGGGAACTCATTCCGGCGGCCGTGCACCCACCTCTCTATCTTTCAATCGGCCCGGGATTGGGTCCGGACGCCCCCCCAGCGCCGGCCCCGGCGGTTATTCCCGATTTGAACGGGGCTCCGCCGCCGCTCATTCCGGATCTCAATGCCCCGGATCAGGCGGGGCTTGCGGAAGAGATAGAGGCAACCTGGGCGGCGCTCAGAGACACCCAGGAAGCGTTGGAGCGCCAGGAGGCGGAACTGAGCGCTTTCAAAGCTCAGCTCAATCATGAACGGCAACAAAGCGCAAAAATGGAACGTGAGTTCCGGGCTCTCACGGCCCGGATCGAATGGCAAGAGGAAAGGCAAGCTTTGTTGCTGCAGCAGCTAGCTCAGGCTAGTGGGGGCGCGCTTAGCGAAACGGTTTCCCCAGAGATCTTTATCATTAATGCAACCTTCATTTTGCTCATTCATGGAGTTGTATTTAGTACCTCTAAGAAATATGATTATCCACCGTTAGTCAGTAATGTGGGTTGGCTTGGATTACTTAGTGTTGCGCGCCTAGGAGGGCAGCGCGCTTTGGGATGCGGAGTAGCTATTATCGCCCAGCTCCCTAACCTAATGCGGCACCGGGTTCGGACCGCAGGGAACCGTAGCATGGGGGGGGCATCTAATCCTTTTGCCGCCGCAAGGCTGGCTAATCGTGAGGCGTCGGTCGGTCCTAGAAACGGCGGCAACGGCGCGAGGACCGGGAGGAAAGAAAGGGCGGTAGATGATAATGAAAAAGGGCGTCGTGTCGGCAGAATGGATGCGCGAAAGGCAATTGAGCTAGCCTATTCGTTATGGGGAATCGATGCTCCGGGCCGAATAGCGCTTACCTCCGGCACCTGGCTTTCTCCGGGCTTAGCTGCGCTTAATAGGCTGGTTTGGCTTCCTCTCTGGCGGCTTCCTTACCTTACCCACGCTACACTCCCACTCCAAGCTACGCCTGCTGAGAAAGATGCATTGCGATTTCCTCTTCTGTGGACGTACCGGAATATGATCCGGGACGGAAAGAGAAAGACTTTTTTCTCCGGCGGGCTTTCTCTCGTAAAGCCAAAGACGCCCCAAGACAAGGTTCCGCTAGTTCACGCAAATCCGAAGAAGTTATCACGGACGAGCCACATGCTAGGAAACTTGCACGTGTGGTTCTGGCCGGGCTTTCCTGAGGAGGGACAATTTTACATATTTCTGCCAAATCCTTCTATTATTAAGTACGGCTGGTACCATTTCGATGTGTTTCGATTCTTCCGAACAAGAGAGGGCGATCGATCTACATCTTTCCCCATAGCCCTGGGGCTGTGTCTCGATCTCCTACGTGCGAAATCCGAGGGACTAGTTCCTATGGGGATTCCCATTGGTCTAATTCCGCGCCTTATGACGAAAGGTGAGTCGGCGTGGCGTAAAGTGAAGATTGAGGGAAGTAGAGAAAAATTCCCTTCTGGGGTATTCCGAAGGTCCGAAGGGATCCAGTGCCCAACTACCGACTCCTCCCGGAATTGCGTTATCGGAGCCGAGCCAGGAATGGCCGTTAGTGGACACCCACCACTTTTCACCGGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Proton_antipo_M

Protein Analysis

681

Amino Acids

75.24

Weight (kDa)

9.8

Isoelectric Point (pI)

44.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015812)

Species Orthologous Gene IDs
arabidopsis_thaliana ATMG00285
fragaria_vesca FvH4_c1g00520
rosa_chinensis RchiOBHm_MTg0499211
rosa_laevigata RLG00000000016 RLG00000000081 RLG00000000123 RLG00000000367 RLG00000017272
rosa_multiflora Rmu_sc0000486.1_g000004
rosa_roxburghii Rroxscaffold_2G00119530 Rroxscaffold_2G00119540 Rroxscaffold_6G00392870
rosa_samantha Rh2BG107500 Rh2CG109300
rosa_wichuraiana Rw3G029490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1704
AccB1I GGYRCC 3 cut(s) 1068, 1325, 1704
AccBSI CCGCTC 2 cut(s) 462, 592
AccI GTMKAC 1 cut(s) 270
AccII CGCG 6 cut(s) 851, 1000, 1017, 1184, 1255, 1852
AccIII TCCGGA 2 cut(s) 529, 598
AclWI GGATC 6 cut(s) 609, 624, 794, 1477, 1942, 1955
AcoI YGGCCR 3 cut(s) 483, 1634, 2007
AcsI RAATTY 1 cut(s) 1913
AcvI CACGTG 1 cut(s) 1624
AcyI GRCGYC 4 cut(s) 534, 1151, 1231, 1544
AfaI GTAC 6 cut(s) 211, 230, 931, 1472, 1697, 1706
AfeI AGCGCT 2 cut(s) 709, 1314
AflIII ACRYGT 1 cut(s) 1623
AgeI ACCGGT 2 cut(s) 212, 2036
AgsI TTSAA 5 cut(s) 123, 344, 510, 574, 715
AhlI ACTAGT 1 cut(s) 1816
AjnI CCWGG 6 cut(s) 650, 672, 690, 1328, 1773, 1999
AjuI GAANNNNNNNTTGG 4 cut(s) 281, 313, 1542, 1574
AloI GAACNNNNNNTCC 4 cut(s) 749, 750, 781, 782
Alw21I GWGCWC 1 cut(s) 492
Alw26I GTCTC 2 cut(s) 660, 1790
Alw44I GTGCAC 1 cut(s) 488
AlwI GGATC 6 cut(s) 609, 624, 794, 1477, 1942, 1955
Ama87I CYCGRG 1 cut(s) 517
Aor13HI TCCGGA 2 cut(s) 529, 598
Aor51HI AGCGCT 2 cut(s) 709, 1314
AoxI GGCC 7 cut(s) 483, 514, 549, 780, 1303, 1634, 2007
ApaLI GTGCAC 1 cut(s) 488
ApeKI GCWGC 5 cut(s) 820, 823, 826, 1012, 1349
ApoI RAATTY 1 cut(s) 1913
ArsI GACNNNNNNTTYG 2 cut(s) 1856, 1888
AseI ATTAAT 1 cut(s) 888
AsiGI ACCGGT 2 cut(s) 212, 2036
Asp700I GAANNNNTTC 1 cut(s) 474
Asp718I GGTACC 1 cut(s) 1704
AspA2I CCTAGG 1 cut(s) 1003
AsuHPI GGTGA 2 cut(s) 1880, 2026
AsuII TTCGAA 1 cut(s) 243
AsuNHI GCTAGC 2 cut(s) 829, 1270
AvaI CYCGRG 1 cut(s) 517
AvaII GGWCC 6 cut(s) 12, 527, 1080, 1160, 1188, 1938
AxyI CCTNAGG 1 cut(s) 1647
BaeGI GKGCMC 3 cut(s) 418, 492, 1958
BaeI ACNNNNGTAYC 2 cut(s) 201, 234
BamHI GGATCC 1 cut(s) 1947
BanI GGYRCC 3 cut(s) 1068, 1325, 1704
BanII GRGCYC 2 cut(s) 583, 775
BbrPI CACGTG 1 cut(s) 1624
BbsI GAAGAC 1 cut(s) 61
Bbv12I GWGCWC 1 cut(s) 492
BbvI GCAGC 5 cut(s) 807, 835, 838, 1024, 1336
BceAI ACGGC 7 cut(s) 470, 752, 795, 1186, 1195, 1714, 1994
BcgI CGANNNNNNTGC 4 cut(s) 1058, 1092, 1588, 1622
BciT130I CCWGG 6 cut(s) 652, 674, 692, 1330, 1775, 2001
BciVI GTATCC 2 cut(s) 93, 229
BcoDI GTCTC 2 cut(s) 660, 1790
BcuI ACTAGT 1 cut(s) 1816
BfaI CTAG 9 cut(s) 234, 830, 840, 1004, 1164, 1271, 1565, 1610, 1817
BfmI CTRYAG 1 cut(s) 821
BfoI RGCGCY 6 cut(s) 379, 548, 662, 691, 711, 1316
BfuI GTATCC 2 cut(s) 93, 229
BglII AGATCT 1 cut(s) 876
BlnI CCTAGG 1 cut(s) 1003
BlpI GCTNAGC 3 cut(s) 720, 854, 1345
Bme18I GGWCC 6 cut(s) 12, 527, 1080, 1160, 1188, 1938
BmeT110I CYCGRG 1 cut(s) 517
BmrI ACTGGG 1 cut(s) 136
BmsI GCATC 5 cut(s) 1016, 1118, 1240, 1285, 1432
BmtI GCTAGC 2 cut(s) 833, 1274
BmuI ACTGGG 1 cut(s) 136
BpiI GAAGAC 1 cut(s) 61
BpmI CTGGAG 1 cut(s) 316
Bpu10I CCTNAGC 1 cut(s) 834
Bpu1102I GCTNAGC 3 cut(s) 720, 854, 1345
Bpu14I TTCGAA 1 cut(s) 243
Bsa29I ATCGAT 2 cut(s) 1293, 1750
BsaAI YACGTR 2 cut(s) 1624, 1799
BsaBI GATNNNNATC 2 cut(s) 881, 1756
BsaHI GRCGYC 4 cut(s) 534, 1151, 1231, 1544
BsaWI WCCGGW 5 cut(s) 212, 529, 598, 1473, 2036
BsaXI ACNNNNNCTCC 2 cut(s) 1401, 1431
Bse118I RCCGGY 3 cut(s) 212, 547, 2036
Bse1I ACTGG 4 cut(s) 24, 131, 333, 1951
Bse21I CCTNAGG 1 cut(s) 1647
Bse3DI GCAATG 1 cut(s) 1445
Bse8I GATNNNNATC 2 cut(s) 881, 1756
BseAI TCCGGA 2 cut(s) 529, 598
BseBI CCWGG 6 cut(s) 652, 674, 692, 1330, 1775, 2001
BseCI ATCGAT 2 cut(s) 1293, 1750
BseGI GGATG 2 cut(s) 1031, 1255
BseJI GATNNNNATC 2 cut(s) 881, 1756
BseMI GCAATG 1 cut(s) 1445
BseMII CTCAG 6 cut(s) 676, 695, 734, 848, 1425, 1638
BseNI ACTGG 4 cut(s) 24, 131, 333, 1951
BsePI GCGCGC 3 cut(s) 849, 998, 1015
BseRI GAGGAG 2 cut(s) 1664, 1960
BseSI GKGCMC 3 cut(s) 418, 492, 1958
BseX3I CGGCCG 1 cut(s) 483
BseXI GCAGC 5 cut(s) 807, 835, 838, 1024, 1336
BseYI CCCAGC 3 cut(s) 321, 541, 1047
Bsh1236I CGCG 6 cut(s) 851, 1000, 1017, 1184, 1255, 1852
Bsh1285I CGRYCG 3 cut(s) 486, 1158, 1750
BshFI GGCC 7 cut(s) 485, 516, 551, 782, 1305, 1636, 2009
BshNI GGYRCC 3 cut(s) 1068, 1325, 1704
BshTI ACCGGT 2 cut(s) 212, 2036
BshVI ATCGAT 2 cut(s) 1293, 1750
BsiEI CGRYCG 3 cut(s) 486, 1158, 1750
BsiHKAI GWGCWC 1 cut(s) 492
BsiHKCI CYCGRG 1 cut(s) 517
BslFI GGGAC 4 cut(s) 338, 1502, 1668, 1827
BsmAI GTCTC 2 cut(s) 660, 1790
BsmFI GGGAC 4 cut(s) 338, 1502, 1668, 1827
BsnI GGCC 7 cut(s) 485, 516, 551, 782, 1305, 1636, 2009
BsoBI CYCGRG 1 cut(s) 517
Bsp119I TTCGAA 1 cut(s) 243
Bsp1286I GDGCHC 5 cut(s) 418, 492, 583, 775, 1958
Bsp13I TCCGGA 2 cut(s) 529, 598
Bsp143I GATC 9 cut(s) 601, 616, 786, 876, 1482, 1747, 1751, 1789, 1947
Bsp1720I GCTNAGC 3 cut(s) 720, 854, 1345
BspANI GGCC 7 cut(s) 485, 516, 551, 782, 1305, 1636, 2009
BspCNI CTCAG 6 cut(s) 675, 696, 733, 847, 1426, 1639
BspDI ATCGAT 2 cut(s) 1293, 1750
BspEI TCCGGA 2 cut(s) 529, 598
BspFNI CGCG 6 cut(s) 851, 1000, 1017, 1184, 1255, 1852
BspHI TCATGA 1 cut(s) 730
BspMAI CTGCAG 1 cut(s) 825
BspOI GCTAGC 2 cut(s) 833, 1274
BspPI GGATC 6 cut(s) 609, 624, 794, 1477, 1942, 1955
BspT104I TTCGAA 1 cut(s) 243
BspT107I GGYRCC 3 cut(s) 1068, 1325, 1704
BsrBI CCGCTC 2 cut(s) 462, 592
BsrDI GCAATG 1 cut(s) 1445
BsrFI RCCGGY 3 cut(s) 212, 547, 2036
BsrI ACTGG 4 cut(s) 24, 131, 333, 1951
BssAI RCCGGY 3 cut(s) 212, 547, 2036
BssHII GCGCGC 3 cut(s) 849, 998, 1015
BssMI GATC 9 cut(s) 601, 616, 786, 876, 1482, 1747, 1751, 1789, 1947
BssNI GRCGYC 4 cut(s) 534, 1151, 1231, 1544
BssT1I CCWWGG 1 cut(s) 1003
Bst2UI CCWGG 6 cut(s) 652, 674, 692, 1330, 1775, 2001
Bst4CI ACNGT 5 cut(s) 81, 179, 865, 957, 1094
Bst6I CTCTTC 3 cut(s) 180, 630, 1464
BstACI GRCGYC 4 cut(s) 534, 1151, 1231, 1544
BstBAI YACGTR 2 cut(s) 1624, 1799
BstBI TTCGAA 1 cut(s) 243
BstDSI CCRYGG 1 cut(s) 93
BstENI CCTNNNNNAGG 1 cut(s) 401
BstF5I GGATG 2 cut(s) 1031, 1255
BstFNI CGCG 6 cut(s) 851, 1000, 1017, 1184, 1255, 1852
BstH2I RGCGCY 6 cut(s) 379, 548, 662, 691, 711, 1316
BstKTI GATC 9 cut(s) 604, 619, 789, 879, 1485, 1750, 1754, 1792, 1950
BstMAI GTCTC 2 cut(s) 660, 1790
BstMBI GATC 9 cut(s) 601, 616, 786, 876, 1482, 1747, 1751, 1789, 1947
BstMCI CGRYCG 3 cut(s) 486, 1158, 1750
BstNI CCWGG 6 cut(s) 652, 674, 692, 1330, 1775, 2001
BstNSI RCATGY 1 cut(s) 1609
BstSFI CTRYAG 1 cut(s) 821
BstSLI GKGCMC 3 cut(s) 418, 492, 1958
BstUI CGCG 6 cut(s) 851, 1000, 1017, 1184, 1255, 1852
BstV1I GCAGC 5 cut(s) 807, 835, 838, 1024, 1336
BstV2I GAAGAC 1 cut(s) 61
BstX2I RGATCY 3 cut(s) 601, 876, 1947
BstXI CCANNNNNNTGG 2 cut(s) 181, 1774
BstYI RGATCY 3 cut(s) 601, 876, 1947
BstZI CGGCCG 1 cut(s) 483
Bsu15I ATCGAT 2 cut(s) 1293, 1750
Bsu36I CCTNAGG 1 cut(s) 1647
BsuI GTATCC 2 cut(s) 93, 229
BsuRI GGCC 7 cut(s) 485, 516, 551, 782, 1305, 1636, 2009
BsuTUI ATCGAT 2 cut(s) 1293, 1750
BtgI CCRYGG 1 cut(s) 93
BtsCI GGATG 2 cut(s) 1031, 1255
BtsIMutI CAGTG 2 cut(s) 31, 1958
CciI TCATGA 1 cut(s) 730
Cfr10I RCCGGY 3 cut(s) 212, 547, 2036
Cfr9I CCCGGG 1 cut(s) 517
ClaI ATCGAT 2 cut(s) 1293, 1750
CpoI CGGWCCG 1 cut(s) 1080
CseI GACGC 4 cut(s) 542, 1140, 1220, 1552
Csp6I GTAC 6 cut(s) 210, 229, 930, 1471, 1696, 1705
CspAI ACCGGT 2 cut(s) 212, 2036
CspCI CAANNNNNGTGG 2 cut(s) 75, 110
CspI CGGWCCG 1 cut(s) 1080
CviAII CATG 5 cut(s) 48, 731, 914, 1099, 1606
CviQI GTAC 6 cut(s) 210, 229, 930, 1471, 1696, 1705
DpnI GATC 9 cut(s) 603, 618, 788, 878, 1484, 1749, 1753, 1791, 1949
DpnII GATC 9 cut(s) 601, 616, 786, 876, 1482, 1747, 1751, 1789, 1947
EaeI YGGCCR 3 cut(s) 483, 1634, 2007
EagI CGGCCG 1 cut(s) 483
Eam1104I CTCTTC 3 cut(s) 180, 630, 1464
EarI CTCTTC 3 cut(s) 180, 630, 1464
EciI GGCGGA 2 cut(s) 573, 713
EclXI CGGCCG 1 cut(s) 483
Eco130I CCWWGG 1 cut(s) 1003
Eco24I GRGCYC 2 cut(s) 583, 775
Eco47I GGWCC 6 cut(s) 12, 527, 1080, 1160, 1188, 1938
Eco47III AGCGCT 2 cut(s) 709, 1314
Eco52I CGGCCG 1 cut(s) 483
Eco72I CACGTG 1 cut(s) 1624
Eco81I CCTNAGG 1 cut(s) 1647
Eco88I CYCGRG 1 cut(s) 517
EcoNI CCTNNNNNAGG 1 cut(s) 401
EcoRII CCWGG 6 cut(s) 650, 672, 690, 1328, 1773, 1999
EcoT14I CCWWGG 1 cut(s) 1003
EcoT22I ATGCAT 1 cut(s) 1447
EcoT38I GRGCYC 2 cut(s) 583, 775
ErhI CCWWGG 1 cut(s) 1003
FaeI CATG 5 cut(s) 51, 734, 917, 1102, 1609
FalI AAGNNNNNCTT 2 cut(s) 796, 828
FaqI GGGAC 4 cut(s) 338, 1502, 1668, 1827
FatI CATG 5 cut(s) 47, 730, 913, 1098, 1605
FauI CCCGC 4 cut(s) 138, 455, 616, 1511
FblI GTMKAC 1 cut(s) 270
FokI GGATG 2 cut(s) 1038, 1262
FriOI GRGCYC 2 cut(s) 583, 775
FspBI CTAG 9 cut(s) 234, 830, 840, 1004, 1164, 1271, 1565, 1610, 1817
GsaI CCCAGC 3 cut(s) 325, 545, 1051
GsuI CTGGAG 1 cut(s) 316
HaeII RGCGCY 6 cut(s) 379, 548, 662, 691, 711, 1316
HaeIII GGCC 7 cut(s) 485, 516, 551, 782, 1305, 1636, 2009
HgaI GACGC 4 cut(s) 542, 1140, 1220, 1552
Hin1I GRCGYC 4 cut(s) 534, 1151, 1231, 1544
Hin1II CATG 5 cut(s) 51, 734, 917, 1102, 1609
HincII GTYRAC 1 cut(s) 271
HindII GTYRAC 1 cut(s) 271
HindIII AAGCTT 1 cut(s) 810
HinfI GANTC 6 cut(s) 68, 1290, 1725, 1831, 1871, 1967
HphI GGTGA 2 cut(s) 1880, 2026
Hpy166II GTNNAC 5 cut(s) 271, 490, 1467, 1570, 2018
Hpy188I TCNGA 8 cut(s) 665, 1080, 1581, 1733, 1810, 1934, 1942, 1991
Hpy188III TCNNGA 8 cut(s) 424, 530, 566, 599, 731, 1145, 1646, 1787
Hpy8I GTNNAC 5 cut(s) 271, 490, 1467, 1570, 2018
Hpy99I CGWCG 4 cut(s) 269, 272, 1156, 1236
HpyAV CCTTC 6 cut(s) 449, 907, 1692, 1929, 1929, 1937
HpyCH4III ACNGT 5 cut(s) 81, 179, 865, 957, 1094
HpyCH4IV ACGT 5 cut(s) 264, 760, 1469, 1623, 1798
HpyCH4V TGCA 5 cut(s) 490, 823, 893, 1445, 1621
HpySE526I ACGT 5 cut(s) 264, 760, 1469, 1623, 1798
Hsp92I GRCGYC 4 cut(s) 534, 1151, 1231, 1544
Hsp92II CATG 5 cut(s) 51, 734, 917, 1102, 1609
Kpn2I TCCGGA 2 cut(s) 529, 598
KpnI GGTACC 1 cut(s) 1708
KroI GCCGGC 1 cut(s) 547
KroNI GCCGGC 1 cut(s) 549
Kzo9I GATC 9 cut(s) 601, 616, 786, 876, 1482, 1747, 1751, 1789, 1947
LmnI GCTCC 8 cut(s) 95, 162, 459, 586, 685, 1056, 1303, 1991
Lsp1109I GCAGC 5 cut(s) 807, 835, 838, 1024, 1336
LweI GCATC 5 cut(s) 1016, 1118, 1240, 1285, 1432
MaeI CTAG 9 cut(s) 234, 830, 840, 1004, 1164, 1271, 1565, 1610, 1817
MaeII ACGT 5 cut(s) 264, 760, 1469, 1623, 1798
MaeIII GTNAC 2 cut(s) 260, 359
MalI GATC 9 cut(s) 603, 618, 788, 878, 1484, 1749, 1753, 1791, 1949
MbiI CCGCTC 2 cut(s) 462, 592
MboI GATC 9 cut(s) 601, 616, 786, 876, 1482, 1747, 1751, 1789, 1947
MfeI CAATTG 1 cut(s) 1263
MflI RGATCY 3 cut(s) 601, 876, 1947
MhlI GDGCHC 5 cut(s) 418, 492, 583, 775, 1958
MluCI AATT 6 cut(s) 293, 1263, 1658, 1845, 1913, 1978
MlyI GAGTC 2 cut(s) 1880, 1961
MmeI TCCRAC 1 cut(s) 663
Mph1103I ATGCAT 1 cut(s) 1447
MroI TCCGGA 2 cut(s) 529, 598
MroNI GCCGGC 1 cut(s) 547
MroXI GAANNNNTTC 1 cut(s) 474
MseI TTAA 3 cut(s) 888, 1356, 1692
MslI CAYNNNNRTG 1 cut(s) 1713
MunI CAATTG 1 cut(s) 1263
MvaI CCWGG 6 cut(s) 652, 674, 692, 1330, 1775, 2001
MvnI CGCG 6 cut(s) 851, 1000, 1017, 1184, 1255, 1852
NaeI GCCGGC 1 cut(s) 549
NdeII GATC 9 cut(s) 601, 616, 786, 876, 1482, 1747, 1751, 1789, 1947
NgoMIV GCCGGC 1 cut(s) 547
NheI GCTAGC 2 cut(s) 829, 1270
NlaIII CATG 5 cut(s) 51, 734, 917, 1102, 1609
NmeAIII GCCGAG 1 cut(s) 2020
NsiI ATGCAT 1 cut(s) 1447
NspI RCATGY 1 cut(s) 1609
NspV TTCGAA 1 cut(s) 243
PagI TCATGA 1 cut(s) 730
PasI CCCWGGG 1 cut(s) 1774
PauI GCGCGC 3 cut(s) 849, 998, 1015
PcsI WCGNNNNNNNCGW 1 cut(s) 1729
PdiI GCCGGC 1 cut(s) 549
PdmI GAANNNNTTC 1 cut(s) 474
PfeI GAWTC 4 cut(s) 68, 1290, 1725, 1831
PflFI GACNNNGTC 1 cut(s) 38
PfoI TCCNGGA 3 cut(s) 71, 1485, 1973
PinAI ACCGGT 2 cut(s) 212, 2036
Ple19I CGATCG 1 cut(s) 1750
PleI GAGTC 2 cut(s) 1879, 1961
PmaCI CACGTG 1 cut(s) 1624
PmlI CACGTG 1 cut(s) 1624
PpsI GAGTC 2 cut(s) 1879, 1961
Ppu21I YACGTR 2 cut(s) 1624, 1799
PshBI ATTAAT 1 cut(s) 888
Psp6I CCWGG 6 cut(s) 650, 672, 690, 1328, 1773, 1999
PspCI CACGTG 1 cut(s) 1624
PspFI CCCAGC 3 cut(s) 321, 541, 1047
PspGI CCWGG 6 cut(s) 650, 672, 690, 1328, 1773, 1999
PstI CTGCAG 1 cut(s) 825
PsuI RGATCY 3 cut(s) 601, 876, 1947
PsyI GACNNNGTC 1 cut(s) 38
PteI GCGCGC 3 cut(s) 849, 998, 1015
PvuI CGATCG 1 cut(s) 1750
RsaI GTAC 6 cut(s) 211, 230, 931, 1472, 1697, 1706
RsaNI GTAC 6 cut(s) 210, 229, 930, 1471, 1696, 1705
RseI CAYNNNNRTG 1 cut(s) 1713
Rsr2I CGGWCCG 1 cut(s) 1080
RsrII CGGWCCG 1 cut(s) 1080
SalI GTCGAC 1 cut(s) 269
SaqAI TTAA 3 cut(s) 888, 1356, 1692
Sau3AI GATC 9 cut(s) 601, 616, 786, 876, 1482, 1747, 1751, 1789, 1947
SchI GAGTC 2 cut(s) 1880, 1961
SduI GDGCHC 5 cut(s) 418, 492, 583, 775, 1958
SfaNI GCATC 5 cut(s) 1016, 1118, 1240, 1285, 1432
SfcI CTRYAG 1 cut(s) 821
SfuI TTCGAA 1 cut(s) 243
SinI GGWCC 6 cut(s) 12, 527, 1080, 1160, 1188, 1938
SmaI CCCGGG 1 cut(s) 519
SmiMI CAYNNNNRTG 1 cut(s) 1713
SpeI ACTAGT 1 cut(s) 1816
Sse9I AATT 6 cut(s) 293, 1263, 1658, 1845, 1913, 1978
SspMI CTAG 9 cut(s) 234, 830, 840, 1004, 1164, 1271, 1565, 1610, 1817
StyI CCWWGG 1 cut(s) 1003
TaaI ACNGT 5 cut(s) 81, 179, 865, 957, 1094
TaiI ACGT 5 cut(s) 267, 763, 1472, 1626, 1801
TaqII GACCGA 2 cut(s) 1144, 1148
TasI AATT 6 cut(s) 293, 1263, 1658, 1845, 1913, 1978
TatI WGTACW 1 cut(s) 228
TauI GCSGC 9 cut(s) 485, 589, 592, 659, 1069, 1127, 1130, 1176, 1387
TfiI GAWTC 4 cut(s) 68, 1290, 1725, 1831
Tru1I TTAA 3 cut(s) 888, 1356, 1692
Tru9I TTAA 3 cut(s) 888, 1356, 1692
TscAI CASTG 2 cut(s) 31, 1958
TseI GCWGC 5 cut(s) 820, 823, 826, 1012, 1349
TspDTI ATGAA 5 cut(s) 36, 747, 889, 902, 1236
TspGWI ACGGA 3 cut(s) 82, 1506, 1609
TspMI CCCGGG 1 cut(s) 517
TspRI CASTG 2 cut(s) 31, 1958
Tth111I GACNNNGTC 1 cut(s) 38
VneI GTGCAC 1 cut(s) 488
VpaK11BI GGWCC 6 cut(s) 12, 527, 1080, 1160, 1188, 1938
VspI ATTAAT 1 cut(s) 888
XagI CCTNNNNNAGG 1 cut(s) 401
XapI RAATTY 1 cut(s) 1913
XceI RCATGY 1 cut(s) 1609
XmaI CCCGGG 1 cut(s) 517
XmaJI CCTAGG 1 cut(s) 1003
XmiI GTMKAC 1 cut(s) 270
XmnI GAANNNNTTC 1 cut(s) 474
XspI CTAG 9 cut(s) 234, 830, 840, 1004, 1164, 1271, 1565, 1610, 1817
Zsp2I ATGCAT 1 cut(s) 1447
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.