RLG00000000123

NADH dehydrogenase (quinone) activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Unknown
OG0015812
Physical Location & Seq
Reverse (-)
614171 .. 617606
3436 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000000123

Sequence Viewer

Length: 2163 bp
ATGCTTTCCGTTGGGCAACACCCAACTACACCTCTCTATAGTTCTTCACTACTCGTACGGGAAGGTAAGAGGAACTTGCTTTTCTGGAGGGAATTATTGTTTGTCAATCAAGAATGCCTCAACTGGATAAATTCACTTATTTCACACAATTCTTCTGGTCATAGCCTTTTCCTCTTTACTTTCTATATTCCCATATGCAATGATGGAGATGGATTCCTTGGGATCAGCAGAATTCTAAAACTACGGAACCGACTGGTTTCACAGCGGGGGAACAATACCCGGAGCAACGACCCCAACAGTTTGGAAGAGATTTTGAGAAAAGGTTTTAGTACCGGTGTATCCTATATGTACTCTAGTTTATTCGAAGTGGCAAAATGGTGTAACGTCGTCGACTTATTGGGAAAAGGGAAGAAATTATTGGGAAAAGGGAAGAAAATGCGCTGGGACTACTCCAGTTTATTTGAAGTCGCAAAATGGTGTAACGCCATTTTCCGGCGCTTTATCTTCCTTTCTTTCCTCGCAAAGGGGCTGTGTGCCCTTTTCTCGACTTTTTTTTGCCTTCTTTTGTCGCCGGAATGGAGCGGGTGGGAACTCATTCCGGCGGCCGTGCACCCACCTCTCTATCTTTCAATCGGCCCGGGATTGGGTCCGGACGCCCCCCCAGCGCCGGCCCCGGCGGTTATTCCCGATTTGAACGGGGCTCCGCCGCCGCTCATTCCGGATCTCAATGCCCCGGATCAGGCGGGGCTTGCGGAAGAGATAGAGGCAACCTGGGCGGCGCTCAGAGACACCCAGGAAGCGTTGGAGCGCCAGGAGGCGGAACTGAGCGCTTTCAAAGCTCAGCTCAATCATGAACGGCAACAAAGCGCAAAAATGGAACGTGAGTTCCGGGCTCTCACGGCCCGGATCGAATGGCAAGAGGAAAGGCAAGCTTTGTTGCTGCAGCAGCTAGCTCAGGCTAGTGGGGGCGCGCTTAGCGAAACGGTTTCCCCAGAGATCTTTATCATTAATGCAACCTTCATTTTGCTCATTCATGGAGTTGTATTTAGTACCTCTAAGAAATATGATTATCCACCGTTAGTCAGTAATGTGGGTTGGCTTGGATTACTTAGTGTTGCGCGCCTAGGAGGGCAGCGCGCTTTGGGATGCGGAGTAGCTATTATCGCCCAGCTCCCTAACCTAATGCGGCACCGGGTTCGGACCGCAGGGAACCGTAGCATGGGGGGGGCATCTAATCCTTTTGCCGCCGCAAGGCTGGCTAATCGTGAGGCGTCGGTCGGTCCTAGAAACGGCGGCAACGGCGCGAGGACCGGGAGGAAAGAAAGGGCGGTAGATGATAATGAAAAAGGGCGTCGTGTCGGCAGAATGGATGCGCGAAAGGCAATTGAGCTAGCCTATTCGTTATGGGGAATCGATGCTCCGGGCCGAATAGCGCTTACCTCCGGCACCTGGCTTTCTCCGGGCTTAGCTGCGCTTAATAGGCTGGTTTGGCTTCCTCTCTGGCGGCTTCCTTACCTTACCCACGCTACACTCCCACTCCAAGCTACGCCTGCTGAGAAAGATGCATTGCGATTTCCTCTTCTGTGGACGTACCGGAATATGATCCGGGACGGAAAGAGAAAGACTTTTTTCTCCGGCGGGCTTTCTCTCGTAAAGCCAAAGACGCCCCAAGACAAGGTTCCGCTAGTTCACGCAAATCCGAAGAAGTTATCACGGACGAGCCACATGCTAGGAAACTTGCACGTGTGGTTCTGGCCGGGCTTTCCTGAGGAGGGACAATTTTACATATTTCTGCCAAATCCTTCTATTATTAAGTACGGCTGGTACCATTTCGATGTGTTTCGATTCTTCCGAACAAGAGAGGGCGATCGATCTACATCTTTCCCCATAGCCCTGGGGCTGTGTCTCGATCTCCTACGTGCGAAATCCGAGGGACTAGTTCCTATGGGGATTCCCATTGGTCTAATTCCGCGCCTTATGACGAAAGGTGAGTCGGCGTGGCGTAAAGTGAAGATTGAGGGAAGTAGAGAAAAATTCCCTTCTGGGGTATTCCGAAGGTCCGAAGGGATCCAGTGCCCAACTACCGACTCCTCCCGGAATTGCGTTATCGGAGCCGAGCCAGGAATGGCCGTTAGTGGACACCCACCACTTTTCACCGGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Proton_antipo_M

Protein Analysis

721

Amino Acids

79.98

Weight (kDa)

9.76

Isoelectric Point (pI)

42.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
YMF19 PF02326 56 - 120 1.9e-06 Plant ATP synthase F0
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015812)

Species Orthologous Gene IDs
arabidopsis_thaliana ATMG00285
fragaria_vesca FvH4_c1g00520
rosa_chinensis RchiOBHm_MTg0499211
rosa_laevigata RLG00000000016 RLG00000000081 RLG00000000123 RLG00000000367 RLG00000017272
rosa_multiflora Rmu_sc0000486.1_g000004
rosa_roxburghii Rroxscaffold_2G00119530 Rroxscaffold_2G00119540 Rroxscaffold_6G00392870
rosa_samantha Rh2BG107500 Rh2CG109300
rosa_wichuraiana Rw3G029490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1824
AccB1I GGYRCC 3 cut(s) 1188, 1445, 1824
AccBSI CCGCTC 2 cut(s) 582, 712
AccI GTMKAC 1 cut(s) 390
AccII CGCG 6 cut(s) 971, 1120, 1137, 1304, 1375, 1972
AccIII TCCGGA 2 cut(s) 649, 718
AclWI GGATC 7 cut(s) 230, 729, 744, 914, 1597, 2062, 2075
AcoI YGGCCR 3 cut(s) 603, 1754, 2127
AcsI RAATTY 3 cut(s) 130, 231, 2033
AcvI CACGTG 1 cut(s) 1744
AcyI GRCGYC 4 cut(s) 654, 1271, 1351, 1664
AfaI GTAC 7 cut(s) 57, 331, 350, 1051, 1592, 1817, 1826
AfeI AGCGCT 2 cut(s) 829, 1434
AflIII ACRYGT 1 cut(s) 1743
AgeI ACCGGT 2 cut(s) 332, 2156
AgsI TTSAA 4 cut(s) 464, 630, 694, 835
AhlI ACTAGT 1 cut(s) 1936
AjnI CCWGG 6 cut(s) 770, 792, 810, 1448, 1893, 2119
AjuI GAANNNNNNNTTGG 4 cut(s) 401, 433, 1662, 1694
AloI GAACNNNNNNTCC 4 cut(s) 869, 870, 901, 902
Alw21I GWGCWC 1 cut(s) 612
Alw26I GTCTC 2 cut(s) 780, 1910
Alw44I GTGCAC 1 cut(s) 608
AlwI GGATC 7 cut(s) 230, 729, 744, 914, 1597, 2062, 2075
Ama87I CYCGRG 1 cut(s) 637
Aor13HI TCCGGA 2 cut(s) 649, 718
Aor51HI AGCGCT 2 cut(s) 829, 1434
AoxI GGCC 7 cut(s) 603, 634, 669, 900, 1423, 1754, 2127
ApaLI GTGCAC 1 cut(s) 608
ApeKI GCWGC 5 cut(s) 940, 943, 946, 1132, 1469
ApoI RAATTY 3 cut(s) 130, 231, 2033
ArsI GACNNNNNNTTYG 2 cut(s) 1976, 2008
AseI ATTAAT 1 cut(s) 1008
AsiGI ACCGGT 2 cut(s) 332, 2156
Asp700I GAANNNNTTC 1 cut(s) 594
Asp718I GGTACC 1 cut(s) 1824
AspA2I CCTAGG 1 cut(s) 1123
AspS9I GGNCC 9 cut(s) 635, 647, 670, 901, 1200, 1280, 1308, 1423, 2058
AsuHPI GGTGA 2 cut(s) 2000, 2146
AsuII TTCGAA 1 cut(s) 363
AsuNHI GCTAGC 2 cut(s) 949, 1390
AvaI CYCGRG 1 cut(s) 637
AvaII GGWCC 5 cut(s) 647, 1200, 1280, 1308, 2058
AvrII CCTAGG 1 cut(s) 1123
AxyI CCTNAGG 1 cut(s) 1767
BaeGI GKGCMC 3 cut(s) 538, 612, 2078
BaeI ACNNNNGTAYC 2 cut(s) 321, 354
BamHI GGATCC 1 cut(s) 2067
BanI GGYRCC 3 cut(s) 1188, 1445, 1824
BanII GRGCYC 2 cut(s) 703, 895
BbrPI CACGTG 1 cut(s) 1744
Bbv12I GWGCWC 1 cut(s) 612
BbvI GCAGC 5 cut(s) 927, 955, 958, 1144, 1456
BccI CCATC 2 cut(s) 197, 203
BceAI ACGGC 7 cut(s) 590, 872, 915, 1306, 1315, 1834, 2114
BcgI CGANNNNNNTGC 4 cut(s) 1178, 1212, 1708, 1742
BciT130I CCWGG 6 cut(s) 772, 794, 812, 1450, 1895, 2121
BciVI GTATCC 1 cut(s) 349
BcoDI GTCTC 2 cut(s) 780, 1910
BcuI ACTAGT 1 cut(s) 1936
BfaI CTAG 9 cut(s) 354, 950, 960, 1124, 1284, 1391, 1685, 1730, 1937
BfmI CTRYAG 2 cut(s) 37, 941
BfoI RGCGCY 6 cut(s) 499, 668, 782, 811, 831, 1436
BfuI GTATCC 1 cut(s) 349
BglII AGATCT 1 cut(s) 996
BlnI CCTAGG 1 cut(s) 1123
BlpI GCTNAGC 3 cut(s) 840, 974, 1465
Bme18I GGWCC 5 cut(s) 647, 1200, 1280, 1308, 2058
BmeT110I CYCGRG 1 cut(s) 637
BmgT120I GGNCC 9 cut(s) 635, 647, 670, 901, 1200, 1280, 1308, 1423, 2058
BmsI GCATC 5 cut(s) 1136, 1238, 1360, 1405, 1552
BmtI GCTAGC 2 cut(s) 953, 1394
BpmI CTGGAG 2 cut(s) 106, 436
Bpu10I CCTNAGC 1 cut(s) 954
Bpu1102I GCTNAGC 3 cut(s) 840, 974, 1465
Bpu14I TTCGAA 1 cut(s) 363
Bsa29I ATCGAT 2 cut(s) 1413, 1870
BsaAI YACGTR 2 cut(s) 1744, 1919
BsaBI GATNNNNATC 2 cut(s) 1001, 1876
BsaHI GRCGYC 4 cut(s) 654, 1271, 1351, 1664
BsaWI WCCGGW 5 cut(s) 332, 649, 718, 1593, 2156
BsaXI ACNNNNNCTCC 2 cut(s) 1521, 1551
Bse118I RCCGGY 3 cut(s) 332, 667, 2156
Bse1I ACTGG 4 cut(s) 128, 258, 453, 2071
Bse21I CCTNAGG 1 cut(s) 1767
Bse3DI GCAATG 2 cut(s) 205, 1565
Bse8I GATNNNNATC 2 cut(s) 1001, 1876
BseAI TCCGGA 2 cut(s) 649, 718
BseBI CCWGG 6 cut(s) 772, 794, 812, 1450, 1895, 2121
BseCI ATCGAT 2 cut(s) 1413, 1870
BseGI GGATG 2 cut(s) 1151, 1375
BseJI GATNNNNATC 2 cut(s) 1001, 1876
BseMI GCAATG 2 cut(s) 205, 1565
BseMII CTCAG 6 cut(s) 796, 815, 854, 968, 1545, 1758
BseNI ACTGG 4 cut(s) 128, 258, 453, 2071
BsePI GCGCGC 3 cut(s) 969, 1118, 1135
BseRI GAGGAG 2 cut(s) 1784, 2080
BseSI GKGCMC 3 cut(s) 538, 612, 2078
BseX3I CGGCCG 1 cut(s) 603
BseXI GCAGC 5 cut(s) 927, 955, 958, 1144, 1456
BseYI CCCAGC 3 cut(s) 441, 661, 1167
Bsh1236I CGCG 6 cut(s) 971, 1120, 1137, 1304, 1375, 1972
Bsh1285I CGRYCG 3 cut(s) 606, 1278, 1870
BshFI GGCC 7 cut(s) 605, 636, 671, 902, 1425, 1756, 2129
BshNI GGYRCC 3 cut(s) 1188, 1445, 1824
BshTI ACCGGT 2 cut(s) 332, 2156
BshVI ATCGAT 2 cut(s) 1413, 1870
BsiEI CGRYCG 3 cut(s) 606, 1278, 1870
BsiHKAI GWGCWC 1 cut(s) 612
BsiHKCI CYCGRG 1 cut(s) 637
BsiWI CGTACG 1 cut(s) 55
BslFI GGGAC 4 cut(s) 458, 1622, 1788, 1947
BsmAI GTCTC 2 cut(s) 780, 1910
BsmFI GGGAC 4 cut(s) 458, 1622, 1788, 1947
BsmI GAATGC 1 cut(s) 119
BsnI GGCC 7 cut(s) 605, 636, 671, 902, 1425, 1756, 2129
BsoBI CYCGRG 1 cut(s) 637
Bsp119I TTCGAA 1 cut(s) 363
Bsp1286I GDGCHC 5 cut(s) 538, 612, 703, 895, 2078
Bsp13I TCCGGA 2 cut(s) 649, 718
Bsp1720I GCTNAGC 3 cut(s) 840, 974, 1465
BspANI GGCC 7 cut(s) 605, 636, 671, 902, 1425, 1756, 2129
BspCNI CTCAG 6 cut(s) 795, 816, 853, 967, 1546, 1759
BspDI ATCGAT 2 cut(s) 1413, 1870
BspEI TCCGGA 2 cut(s) 649, 718
BspFNI CGCG 6 cut(s) 971, 1120, 1137, 1304, 1375, 1972
BspHI TCATGA 1 cut(s) 850
BspMAI CTGCAG 1 cut(s) 945
BspOI GCTAGC 2 cut(s) 953, 1394
BspPI GGATC 7 cut(s) 230, 729, 744, 914, 1597, 2062, 2075
BspT104I TTCGAA 1 cut(s) 363
BspT107I GGYRCC 3 cut(s) 1188, 1445, 1824
BsrBI CCGCTC 2 cut(s) 582, 712
BsrDI GCAATG 2 cut(s) 205, 1565
BsrFI RCCGGY 3 cut(s) 332, 667, 2156
BsrI ACTGG 4 cut(s) 128, 258, 453, 2071
BssAI RCCGGY 3 cut(s) 332, 667, 2156
BssHII GCGCGC 3 cut(s) 969, 1118, 1135
BssNI GRCGYC 4 cut(s) 654, 1271, 1351, 1664
BssT1I CCWWGG 2 cut(s) 217, 1123
Bst2UI CCWGG 6 cut(s) 772, 794, 812, 1450, 1895, 2121
Bst4CI ACNGT 4 cut(s) 299, 985, 1077, 1214
Bst6I CTCTTC 3 cut(s) 300, 750, 1584
BstACI GRCGYC 4 cut(s) 654, 1271, 1351, 1664
BstBAI YACGTR 2 cut(s) 1744, 1919
BstBI TTCGAA 1 cut(s) 363
BstENI CCTNNNNNAGG 1 cut(s) 521
BstF5I GGATG 2 cut(s) 1151, 1375
BstFNI CGCG 6 cut(s) 971, 1120, 1137, 1304, 1375, 1972
BstH2I RGCGCY 6 cut(s) 499, 668, 782, 811, 831, 1436
BstMAI GTCTC 2 cut(s) 780, 1910
BstMCI CGRYCG 3 cut(s) 606, 1278, 1870
BstNI CCWGG 6 cut(s) 772, 794, 812, 1450, 1895, 2121
BstNSI RCATGY 1 cut(s) 1729
BstSFI CTRYAG 2 cut(s) 37, 941
BstSLI GKGCMC 3 cut(s) 538, 612, 2078
BstUI CGCG 6 cut(s) 971, 1120, 1137, 1304, 1375, 1972
BstV1I GCAGC 5 cut(s) 927, 955, 958, 1144, 1456
BstX2I RGATCY 3 cut(s) 721, 996, 2067
BstXI CCANNNNNNTGG 2 cut(s) 301, 1894
BstYI RGATCY 3 cut(s) 721, 996, 2067
BstZI CGGCCG 1 cut(s) 603
Bsu15I ATCGAT 2 cut(s) 1413, 1870
Bsu36I CCTNAGG 1 cut(s) 1767
BsuI GTATCC 1 cut(s) 349
BsuRI GGCC 7 cut(s) 605, 636, 671, 902, 1425, 1756, 2129
BsuTUI ATCGAT 2 cut(s) 1413, 1870
BtsCI GGATG 2 cut(s) 1151, 1375
BtsIMutI CAGTG 1 cut(s) 2078
CciI TCATGA 1 cut(s) 850
Cfr10I RCCGGY 3 cut(s) 332, 667, 2156
Cfr13I GGNCC 9 cut(s) 635, 647, 670, 901, 1200, 1280, 1308, 1423, 2058
Cfr9I CCCGGG 1 cut(s) 637
ClaI ATCGAT 2 cut(s) 1413, 1870
CpoI CGGWCCG 1 cut(s) 1200
CseI GACGC 4 cut(s) 662, 1260, 1340, 1672
Csp6I GTAC 7 cut(s) 56, 330, 349, 1050, 1591, 1816, 1825
CspAI ACCGGT 2 cut(s) 332, 2156
CspI CGGWCCG 1 cut(s) 1200
CviAII CATG 4 cut(s) 851, 1034, 1219, 1726
CviQI GTAC 7 cut(s) 56, 330, 349, 1050, 1591, 1816, 1825
EaeI YGGCCR 3 cut(s) 603, 1754, 2127
EagI CGGCCG 1 cut(s) 603
Eam1104I CTCTTC 3 cut(s) 300, 750, 1584
EarI CTCTTC 3 cut(s) 300, 750, 1584
EciI GGCGGA 2 cut(s) 693, 833
EclXI CGGCCG 1 cut(s) 603
Eco130I CCWWGG 2 cut(s) 217, 1123
Eco24I GRGCYC 2 cut(s) 703, 895
Eco47I GGWCC 5 cut(s) 647, 1200, 1280, 1308, 2058
Eco47III AGCGCT 2 cut(s) 829, 1434
Eco52I CGGCCG 1 cut(s) 603
Eco72I CACGTG 1 cut(s) 1744
Eco81I CCTNAGG 1 cut(s) 1767
Eco88I CYCGRG 1 cut(s) 637
EcoNI CCTNNNNNAGG 1 cut(s) 521
EcoRI GAATTC 1 cut(s) 231
EcoRII CCWGG 6 cut(s) 770, 792, 810, 1448, 1893, 2119
EcoT14I CCWWGG 2 cut(s) 217, 1123
EcoT22I ATGCAT 1 cut(s) 1567
EcoT38I GRGCYC 2 cut(s) 703, 895
ErhI CCWWGG 2 cut(s) 217, 1123
FaeI CATG 4 cut(s) 854, 1037, 1222, 1729
FalI AAGNNNNNCTT 4 cut(s) 59, 91, 916, 948
FaqI GGGAC 4 cut(s) 458, 1622, 1788, 1947
FatI CATG 4 cut(s) 850, 1033, 1218, 1725
FauI CCCGC 4 cut(s) 258, 575, 736, 1631
FauNDI CATATG 1 cut(s) 194
FblI GTMKAC 1 cut(s) 390
FokI GGATG 2 cut(s) 1158, 1382
FriOI GRGCYC 2 cut(s) 703, 895
FspBI CTAG 9 cut(s) 354, 950, 960, 1124, 1284, 1391, 1685, 1730, 1937
GsaI CCCAGC 3 cut(s) 445, 665, 1171
GsuI CTGGAG 2 cut(s) 106, 436
HaeII RGCGCY 6 cut(s) 499, 668, 782, 811, 831, 1436
HaeIII GGCC 7 cut(s) 605, 636, 671, 902, 1425, 1756, 2129
HgaI GACGC 4 cut(s) 662, 1260, 1340, 1672
Hin1I GRCGYC 4 cut(s) 654, 1271, 1351, 1664
Hin1II CATG 4 cut(s) 854, 1037, 1222, 1729
HincII GTYRAC 1 cut(s) 391
HindII GTYRAC 1 cut(s) 391
HindIII AAGCTT 1 cut(s) 930
HinfI GANTC 6 cut(s) 213, 1410, 1845, 1951, 1991, 2087
HphI GGTGA 2 cut(s) 2000, 2146
Hpy166II GTNNAC 5 cut(s) 391, 610, 1587, 1690, 2138
Hpy188I TCNGA 8 cut(s) 785, 1200, 1701, 1853, 1930, 2054, 2062, 2111
Hpy8I GTNNAC 5 cut(s) 391, 610, 1587, 1690, 2138
Hpy99I CGWCG 4 cut(s) 389, 392, 1276, 1356
HpyAV CCTTC 7 cut(s) 56, 569, 1027, 1812, 2049, 2049, 2057
HpyCH4III ACNGT 4 cut(s) 299, 985, 1077, 1214
HpyCH4IV ACGT 5 cut(s) 384, 880, 1589, 1743, 1918
HpyCH4V TGCA 6 cut(s) 198, 610, 943, 1013, 1565, 1741
HpySE526I ACGT 5 cut(s) 384, 880, 1589, 1743, 1918
Hsp92I GRCGYC 4 cut(s) 654, 1271, 1351, 1664
Hsp92II CATG 4 cut(s) 854, 1037, 1222, 1729
Kpn2I TCCGGA 2 cut(s) 649, 718
KpnI GGTACC 1 cut(s) 1828
KroI GCCGGC 1 cut(s) 667
KroNI GCCGGC 1 cut(s) 669
LmnI GCTCC 7 cut(s) 282, 579, 706, 805, 1176, 1423, 2111
Lsp1109I GCAGC 5 cut(s) 927, 955, 958, 1144, 1456
LweI GCATC 5 cut(s) 1136, 1238, 1360, 1405, 1552
MaeI CTAG 9 cut(s) 354, 950, 960, 1124, 1284, 1391, 1685, 1730, 1937
MaeII ACGT 5 cut(s) 384, 880, 1589, 1743, 1918
MaeIII GTNAC 2 cut(s) 380, 479
MbiI CCGCTC 2 cut(s) 582, 712
MfeI CAATTG 1 cut(s) 1383
MflI RGATCY 3 cut(s) 721, 996, 2067
MhlI GDGCHC 5 cut(s) 538, 612, 703, 895, 2078
MlyI GAGTC 2 cut(s) 2000, 2081
MmeI TCCRAC 1 cut(s) 783
Mph1103I ATGCAT 1 cut(s) 1567
MroI TCCGGA 2 cut(s) 649, 718
MroNI GCCGGC 1 cut(s) 667
MroXI GAANNNNTTC 1 cut(s) 594
MseI TTAA 3 cut(s) 1008, 1476, 1812
MslI CAYNNNNRTG 1 cut(s) 1833
MspA1I CMGCKG 1 cut(s) 265
MunI CAATTG 1 cut(s) 1383
Mva1269I GAATGC 1 cut(s) 119
MvaI CCWGG 6 cut(s) 772, 794, 812, 1450, 1895, 2121
MvnI CGCG 6 cut(s) 971, 1120, 1137, 1304, 1375, 1972
NaeI GCCGGC 1 cut(s) 669
NdeI CATATG 1 cut(s) 194
NgoMIV GCCGGC 1 cut(s) 667
NheI GCTAGC 2 cut(s) 949, 1390
NlaIII CATG 4 cut(s) 854, 1037, 1222, 1729
NmeAIII GCCGAG 1 cut(s) 2140
NsiI ATGCAT 1 cut(s) 1567
NspI RCATGY 1 cut(s) 1729
NspV TTCGAA 1 cut(s) 363
PagI TCATGA 1 cut(s) 850
PasI CCCWGGG 1 cut(s) 1894
PauI GCGCGC 3 cut(s) 969, 1118, 1135
PcsI WCGNNNNNNNCGW 1 cut(s) 1849
PctI GAATGC 1 cut(s) 119
PdiI GCCGGC 1 cut(s) 669
PdmI GAANNNNTTC 1 cut(s) 594
PfeI GAWTC 4 cut(s) 213, 1410, 1845, 1951
Pfl23II CGTACG 1 cut(s) 55
PfoI TCCNGGA 2 cut(s) 1605, 2093
PinAI ACCGGT 2 cut(s) 332, 2156
Ple19I CGATCG 1 cut(s) 1870
PleI GAGTC 2 cut(s) 1999, 2081
PmaCI CACGTG 1 cut(s) 1744
PmlI CACGTG 1 cut(s) 1744
PpsI GAGTC 2 cut(s) 1999, 2081
Ppu21I YACGTR 2 cut(s) 1744, 1919
PshBI ATTAAT 1 cut(s) 1008
Psp6I CCWGG 6 cut(s) 770, 792, 810, 1448, 1893, 2119
PspCI CACGTG 1 cut(s) 1744
PspFI CCCAGC 3 cut(s) 441, 661, 1167
PspGI CCWGG 6 cut(s) 770, 792, 810, 1448, 1893, 2119
PspLI CGTACG 1 cut(s) 55
PspPI GGNCC 9 cut(s) 635, 647, 670, 901, 1200, 1280, 1308, 1423, 2058
PstI CTGCAG 1 cut(s) 945
PsuI RGATCY 3 cut(s) 721, 996, 2067
PteI GCGCGC 3 cut(s) 969, 1118, 1135
PvuI CGATCG 1 cut(s) 1870
RsaI GTAC 7 cut(s) 57, 331, 350, 1051, 1592, 1817, 1826
RsaNI GTAC 7 cut(s) 56, 330, 349, 1050, 1591, 1816, 1825
RseI CAYNNNNRTG 1 cut(s) 1833
Rsr2I CGGWCCG 1 cut(s) 1200
RsrII CGGWCCG 1 cut(s) 1200
SalI GTCGAC 1 cut(s) 389
SaqAI TTAA 3 cut(s) 1008, 1476, 1812
Sau96I GGNCC 9 cut(s) 635, 647, 670, 901, 1200, 1280, 1308, 1423, 2058
SchI GAGTC 2 cut(s) 2000, 2081
SduI GDGCHC 5 cut(s) 538, 612, 703, 895, 2078
SfaNI GCATC 5 cut(s) 1136, 1238, 1360, 1405, 1552
SfcI CTRYAG 2 cut(s) 37, 941
SfuI TTCGAA 1 cut(s) 363
SinI GGWCC 5 cut(s) 647, 1200, 1280, 1308, 2058
SmaI CCCGGG 1 cut(s) 639
SmiMI CAYNNNNRTG 1 cut(s) 1833
SpeI ACTAGT 1 cut(s) 1936
SspMI CTAG 9 cut(s) 354, 950, 960, 1124, 1284, 1391, 1685, 1730, 1937
StyI CCWWGG 2 cut(s) 217, 1123
TaaI ACNGT 4 cut(s) 299, 985, 1077, 1214
TaiI ACGT 5 cut(s) 387, 883, 1592, 1746, 1921
TaqI TCGA 9 cut(s) 363, 390, 545, 909, 1413, 1833, 1843, 1870, 1908
TaqII GACCGA 2 cut(s) 1264, 1268
TatI WGTACW 1 cut(s) 348
TauI GCSGC 9 cut(s) 605, 709, 712, 779, 1189, 1247, 1250, 1296, 1507
TfiI GAWTC 4 cut(s) 213, 1410, 1845, 1951
Tru1I TTAA 3 cut(s) 1008, 1476, 1812
Tru9I TTAA 3 cut(s) 1008, 1476, 1812
TscAI CASTG 1 cut(s) 2078
TseI GCWGC 5 cut(s) 940, 943, 946, 1132, 1469
TspDTI ATGAA 4 cut(s) 867, 1009, 1022, 1356
TspGWI ACGGA 3 cut(s) 259, 1626, 1729
TspMI CCCGGG 1 cut(s) 637
TspRI CASTG 1 cut(s) 2078
VneI GTGCAC 1 cut(s) 608
VpaK11BI GGWCC 5 cut(s) 647, 1200, 1280, 1308, 2058
VspI ATTAAT 1 cut(s) 1008
XagI CCTNNNNNAGG 1 cut(s) 521
XapI RAATTY 3 cut(s) 130, 231, 2033
XceI RCATGY 1 cut(s) 1729
XmaI CCCGGG 1 cut(s) 637
XmaJI CCTAGG 1 cut(s) 1123
XmiI GTMKAC 1 cut(s) 390
XmnI GAANNNNTTC 1 cut(s) 594
XspI CTAG 9 cut(s) 354, 950, 960, 1124, 1284, 1391, 1685, 1730, 1937
Zsp2I ATGCAT 1 cut(s) 1567
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.