Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0095201 RchiOBHm_Chr6g0285881 |
| rosa_laevigata | RLG00000000751 RLG00000002295 RLG00000010237 RLG00000025502 |
| rosa_multiflora | Rmu_sc0002129.1_g000014 |
| rosa_roxburghii | Rroxscaffold_1G00028370 Rroxscaffold_5G00349650 |
| rosa_rugosa | Rorug02G0529200 |
| rosa_samantha | Rh1DG087100 Rh2AG140000 Rh2BG143400 Rh2DG097800 Rh3CG363800 Rh3DG316300 Rh4AG097200 Rh4CG106500 Rh6CG292100 Rh6DG284200 Rh7CG172400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 11 |
| AcsI | RAATTY | 2 cut(s) | 52, 235 |
| AfaI | GTAC | 1 cut(s) | 259 |
| AluBI | AGCT | 4 cut(s) | 104, 121, 268, 303 |
| AluI | AGCT | 4 cut(s) | 104, 121, 268, 303 |
| Alw26I | GTCTC | 1 cut(s) | 209 |
| ApoI | RAATTY | 2 cut(s) | 52, 235 |
| AsuHPI | GGTGA | 1 cut(s) | 155 |
| BcoDI | GTCTC | 1 cut(s) | 209 |
| BfaI | CTAG | 1 cut(s) | 101 |
| BmsI | GCATC | 3 cut(s) | 7, 123, 271 |
| BpmI | CTGGAG | 1 cut(s) | 126 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 181, 211 |
| Bse3DI | GCAATG | 1 cut(s) | 96 |
| BseGI | GGATG | 1 cut(s) | 22 |
| BseMI | GCAATG | 1 cut(s) | 96 |
| BseRI | GAGGAG | 1 cut(s) | 161 |
| BsmAI | GTCTC | 1 cut(s) | 209 |
| BsmI | GAATGC | 1 cut(s) | 45 |
| BspACI | CCGC | 1 cut(s) | 11 |
| BsrDI | GCAATG | 1 cut(s) | 96 |
| Bst4CI | ACNGT | 1 cut(s) | 73 |
| BstDEI | CTNAG | 2 cut(s) | 45, 125 |
| BstF5I | GGATG | 1 cut(s) | 22 |
| BstMAI | GTCTC | 1 cut(s) | 209 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 17 |
| BstNSI | RCATGY | 1 cut(s) | 24 |
| BtsCI | GGATG | 1 cut(s) | 22 |
| Csp6I | GTAC | 1 cut(s) | 258 |
| CviAII | CATG | 2 cut(s) | 21, 212 |
| CviJI | RGCY | 6 cut(s) | 68, 104, 121, 250, 268, 303 |
| CviKI_1 | RGCY | 6 cut(s) | 68, 104, 121, 250, 268, 303 |
| CviQI | GTAC | 1 cut(s) | 258 |
| DdeI | CTNAG | 2 cut(s) | 45, 125 |
| EcoRI | GAATTC | 1 cut(s) | 52 |
| EcoT22I | ATGCAT | 1 cut(s) | 22 |
| FaeI | CATG | 2 cut(s) | 24, 215 |
| FaiI | YATR | 5 cut(s) | 22, 87, 213, 241, 256 |
| FatI | CATG | 2 cut(s) | 20, 211 |
| FauI | CCCGC | 1 cut(s) | 4 |
| FokI | GGATG | 1 cut(s) | 29 |
| FspBI | CTAG | 1 cut(s) | 101 |
| GsuI | CTGGAG | 1 cut(s) | 126 |
| Hin1II | CATG | 2 cut(s) | 24, 215 |
| HphI | GGTGA | 1 cut(s) | 155 |
| HpyCH4III | ACNGT | 1 cut(s) | 73 |
| HpyCH4V | TGCA | 4 cut(s) | 20, 89, 94, 284 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 17 |
| HpyF3I | CTNAG | 2 cut(s) | 45, 125 |
| Hsp92II | CATG | 2 cut(s) | 24, 215 |
| LmnI | GCTCC | 1 cut(s) | 300 |
| LpnPI | CCDG | 3 cut(s) | 66, 90, 213 |
| LweI | GCATC | 3 cut(s) | 7, 123, 271 |
| MaeI | CTAG | 1 cut(s) | 101 |
| MaeIII | GTNAC | 1 cut(s) | 289 |
| MluCI | AATT | 2 cut(s) | 52, 235 |
| MnlI | CCTC | 5 cut(s) | 42, 134, 139, 148, 207 |
| Mph1103I | ATGCAT | 1 cut(s) | 22 |
| Mva1269I | GAATGC | 1 cut(s) | 45 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 17 |
| NlaIII | CATG | 2 cut(s) | 24, 215 |
| NmuCI | GTSAC | 1 cut(s) | 289 |
| NsiI | ATGCAT | 1 cut(s) | 22 |
| NspI | RCATGY | 1 cut(s) | 24 |
| PctI | GAATGC | 1 cut(s) | 45 |
| RsaI | GTAC | 1 cut(s) | 259 |
| RsaNI | GTAC | 1 cut(s) | 258 |
| SetI | ASST | 8 cut(s) | 30, 106, 123, 131, 145, 199, 270, 305 |
| SfaNI | GCATC | 3 cut(s) | 7, 123, 271 |
| Sse9I | AATT | 2 cut(s) | 52, 235 |
| SsiI | CCGC | 1 cut(s) | 11 |
| SspMI | CTAG | 1 cut(s) | 101 |
| TaaI | ACNGT | 1 cut(s) | 73 |
| TasI | AATT | 2 cut(s) | 52, 235 |
| TseFI | GTSAC | 1 cut(s) | 289 |
| Tsp45I | GTSAC | 1 cut(s) | 289 |
| XapI | RAATTY | 2 cut(s) | 52, 235 |
| XceI | RCATGY | 1 cut(s) | 24 |
| XspI | CTAG | 1 cut(s) | 101 |
| Zsp2I | ATGCAT | 1 cut(s) | 22 |