Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0095201 RchiOBHm_Chr6g0285881 |
| rosa_laevigata | RLG00000000751 RLG00000002295 RLG00000010237 RLG00000025502 |
| rosa_multiflora | Rmu_sc0002129.1_g000014 |
| rosa_roxburghii | Rroxscaffold_1G00028370 Rroxscaffold_5G00349650 |
| rosa_rugosa | Rorug02G0529200 |
| rosa_samantha | Rh1DG087100 Rh2AG140000 Rh2BG143400 Rh2DG097800 Rh3CG363800 Rh3DG316300 Rh4AG097200 Rh4CG106500 Rh6CG292100 Rh6DG284200 Rh7CG172400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AhlI | ACTAGT | 1 cut(s) | 89 |
| AluBI | AGCT | 2 cut(s) | 31, 180 |
| AluI | AGCT | 2 cut(s) | 31, 180 |
| Alw21I | GWGCWC | 1 cut(s) | 182 |
| Ama87I | CYCGRG | 1 cut(s) | 35 |
| AoxI | GGCC | 1 cut(s) | 189 |
| AsuHPI | GGTGA | 1 cut(s) | 65 |
| AvaI | CYCGRG | 1 cut(s) | 35 |
| BanII | GRGCYC | 1 cut(s) | 182 |
| Bbv12I | GWGCWC | 1 cut(s) | 182 |
| BcuI | ACTAGT | 1 cut(s) | 89 |
| BfaI | CTAG | 1 cut(s) | 90 |
| BmeT110I | CYCGRG | 1 cut(s) | 35 |
| BmsI | GCATC | 2 cut(s) | 10, 33 |
| BpmI | CTGGAG | 1 cut(s) | 36 |
| BpuEI | CTTGAG | 1 cut(s) | 166 |
| BsaJI | CCNNGG | 3 cut(s) | 105, 171, 192 |
| BseDI | CCNNGG | 3 cut(s) | 105, 171, 192 |
| BseMII | CTCAG | 1 cut(s) | 108 |
| BseRI | GAGGAG | 1 cut(s) | 175 |
| BshFI | GGCC | 1 cut(s) | 191 |
| BsiHKAI | GWGCWC | 1 cut(s) | 182 |
| BsiHKCI | CYCGRG | 1 cut(s) | 35 |
| BsnI | GGCC | 1 cut(s) | 191 |
| BsoBI | CYCGRG | 1 cut(s) | 35 |
| Bsp1286I | GDGCHC | 1 cut(s) | 182 |
| Bsp143I | GATC | 1 cut(s) | 201 |
| BspANI | GGCC | 1 cut(s) | 191 |
| BspCNI | CTCAG | 1 cut(s) | 109 |
| BssECI | CCNNGG | 3 cut(s) | 105, 171, 192 |
| BssMI | GATC | 1 cut(s) | 201 |
| BssT1I | CCWWGG | 3 cut(s) | 105, 171, 192 |
| BstDEI | CTNAG | 1 cut(s) | 117 |
| BstKTI | GATC | 1 cut(s) | 204 |
| BstMBI | GATC | 1 cut(s) | 201 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 20 |
| BsuRI | GGCC | 1 cut(s) | 191 |
| CviJI | RGCY | 5 cut(s) | 14, 31, 110, 180, 191 |
| CviKI_1 | RGCY | 5 cut(s) | 14, 31, 110, 180, 191 |
| DdeI | CTNAG | 1 cut(s) | 117 |
| DpnI | GATC | 1 cut(s) | 203 |
| DpnII | GATC | 1 cut(s) | 201 |
| Ecl136II | GAGCTC | 1 cut(s) | 180 |
| Eco130I | CCWWGG | 3 cut(s) | 105, 171, 192 |
| Eco24I | GRGCYC | 1 cut(s) | 182 |
| Eco53kI | GAGCTC | 1 cut(s) | 180 |
| Eco88I | CYCGRG | 1 cut(s) | 35 |
| EcoICRI | GAGCTC | 1 cut(s) | 180 |
| EcoT14I | CCWWGG | 3 cut(s) | 105, 171, 192 |
| EcoT38I | GRGCYC | 1 cut(s) | 182 |
| ErhI | CCWWGG | 3 cut(s) | 105, 171, 192 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 128, 160 |
| FriOI | GRGCYC | 1 cut(s) | 182 |
| FspBI | CTAG | 1 cut(s) | 90 |
| GsuI | CTGGAG | 1 cut(s) | 36 |
| HaeIII | GGCC | 1 cut(s) | 191 |
| HphI | GGTGA | 1 cut(s) | 65 |
| Hpy188I | TCNGA | 1 cut(s) | 206 |
| Hpy188III | TCNNGA | 1 cut(s) | 116 |
| HpyCH4V | TGCA | 1 cut(s) | 4 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 20 |
| HpyF3I | CTNAG | 1 cut(s) | 117 |
| Kzo9I | GATC | 1 cut(s) | 201 |
| LmnI | GCTCC | 1 cut(s) | 28 |
| LpnPI | CCDG | 2 cut(s) | 129, 168 |
| LweI | GCATC | 2 cut(s) | 10, 33 |
| MaeI | CTAG | 1 cut(s) | 90 |
| MalI | GATC | 1 cut(s) | 203 |
| MboI | GATC | 1 cut(s) | 201 |
| MhlI | GDGCHC | 1 cut(s) | 182 |
| MmeI | TCCRAC | 1 cut(s) | 6 |
| MnlI | CCTC | 6 cut(s) | 44, 49, 58, 141, 146, 153 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 20 |
| NdeII | GATC | 1 cut(s) | 201 |
| Psp124BI | GAGCTC | 1 cut(s) | 182 |
| SacI | GAGCTC | 1 cut(s) | 182 |
| Sau3AI | GATC | 1 cut(s) | 201 |
| SduI | GDGCHC | 1 cut(s) | 182 |
| SetI | ASST | 6 cut(s) | 33, 55, 157, 173, 182, 198 |
| SfaNI | GCATC | 2 cut(s) | 10, 33 |
| SmlI | CTYRAG | 1 cut(s) | 145 |
| SmoI | CTYRAG | 1 cut(s) | 145 |
| SpeI | ACTAGT | 1 cut(s) | 89 |
| SspMI | CTAG | 1 cut(s) | 90 |
| SstI | GAGCTC | 1 cut(s) | 182 |
| StyI | CCWWGG | 3 cut(s) | 105, 171, 192 |
| XspI | CTAG | 1 cut(s) | 90 |