Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0095201 RchiOBHm_Chr6g0285881 |
| rosa_laevigata | RLG00000000751 RLG00000002295 RLG00000010237 RLG00000025502 |
| rosa_multiflora | Rmu_sc0002129.1_g000014 |
| rosa_roxburghii | Rroxscaffold_1G00028370 Rroxscaffold_5G00349650 |
| rosa_rugosa | Rorug02G0529200 |
| rosa_samantha | Rh1DG087100 Rh2AG140000 Rh2BG143400 Rh2DG097800 Rh3CG363800 Rh3DG316300 Rh4AG097200 Rh4CG106500 Rh6CG292100 Rh6DG284200 Rh7CG172400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 52 |
| AhlI | ACTAGT | 1 cut(s) | 179 |
| AjnI | CCWGG | 1 cut(s) | 99 |
| AluBI | AGCT | 1 cut(s) | 121 |
| AluI | AGCT | 1 cut(s) | 121 |
| Ama87I | CYCGRG | 1 cut(s) | 125 |
| AoxI | GGCC | 1 cut(s) | 244 |
| ApoI | RAATTY | 1 cut(s) | 52 |
| AsuHPI | GGTGA | 1 cut(s) | 155 |
| AvaI | CYCGRG | 1 cut(s) | 125 |
| BccI | CCATC | 1 cut(s) | 284 |
| BciT130I | CCWGG | 1 cut(s) | 101 |
| BcuI | ACTAGT | 1 cut(s) | 179 |
| BfaI | CTAG | 1 cut(s) | 180 |
| Bme1390I | CCNGG | 1 cut(s) | 101 |
| BmeT110I | CYCGRG | 1 cut(s) | 125 |
| BmrFI | CCNGG | 1 cut(s) | 101 |
| BmsI | GCATC | 3 cut(s) | 7, 100, 123 |
| BpmI | CTGGAG | 1 cut(s) | 126 |
| BpuEI | CTTGAG | 2 cut(s) | 65, 256 |
| BsaAI | YACGTR | 1 cut(s) | 23 |
| BsaJI | CCNNGG | 2 cut(s) | 195, 247 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 264, 294 |
| Bse3DI | GCAATG | 2 cut(s) | 96, 101 |
| BseBI | CCWGG | 1 cut(s) | 101 |
| BseDI | CCNNGG | 2 cut(s) | 195, 247 |
| BseGI | GGATG | 1 cut(s) | 22 |
| BseMI | GCAATG | 2 cut(s) | 96, 101 |
| BseMII | CTCAG | 2 cut(s) | 198, 251 |
| BseRI | GAGGAG | 2 cut(s) | 161, 290 |
| BshFI | GGCC | 1 cut(s) | 246 |
| BsiHKCI | CYCGRG | 1 cut(s) | 125 |
| BsmI | GAATGC | 2 cut(s) | 45, 196 |
| BsnI | GGCC | 1 cut(s) | 246 |
| BsoBI | CYCGRG | 1 cut(s) | 125 |
| Bsp143I | GATC | 1 cut(s) | 256 |
| BspANI | GGCC | 1 cut(s) | 246 |
| BspCNI | CTCAG | 2 cut(s) | 199, 252 |
| BsrDI | GCAATG | 2 cut(s) | 96, 101 |
| BssECI | CCNNGG | 2 cut(s) | 195, 247 |
| BssMI | GATC | 1 cut(s) | 256 |
| BssT1I | CCWWGG | 2 cut(s) | 195, 247 |
| Bst2UI | CCWGG | 1 cut(s) | 101 |
| BstBAI | YACGTR | 1 cut(s) | 23 |
| BstDEI | CTNAG | 2 cut(s) | 207, 260 |
| BstF5I | GGATG | 1 cut(s) | 22 |
| BstKTI | GATC | 1 cut(s) | 259 |
| BstMBI | GATC | 1 cut(s) | 256 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 110 |
| BstNI | CCWGG | 1 cut(s) | 101 |
| BstSCI | CCNGG | 1 cut(s) | 99 |
| BsuRI | GGCC | 1 cut(s) | 246 |
| BtsCI | GGATG | 1 cut(s) | 22 |
| CviJI | RGCY | 5 cut(s) | 68, 104, 121, 200, 246 |
| CviKI_1 | RGCY | 5 cut(s) | 68, 104, 121, 200, 246 |
| DdeI | CTNAG | 2 cut(s) | 207, 260 |
| DpnI | GATC | 1 cut(s) | 258 |
| DpnII | GATC | 1 cut(s) | 256 |
| Eco130I | CCWWGG | 2 cut(s) | 195, 247 |
| Eco88I | CYCGRG | 1 cut(s) | 125 |
| EcoRI | GAATTC | 1 cut(s) | 52 |
| EcoRII | CCWGG | 1 cut(s) | 99 |
| EcoT14I | CCWWGG | 2 cut(s) | 195, 247 |
| ErhI | CCWWGG | 2 cut(s) | 195, 247 |
| FaiI | YATR | 3 cut(s) | 74, 81, 87 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 218, 250 |
| FokI | GGATG | 1 cut(s) | 29 |
| FspBI | CTAG | 1 cut(s) | 180 |
| GsuI | CTGGAG | 1 cut(s) | 126 |
| HaeIII | GGCC | 1 cut(s) | 246 |
| HphI | GGTGA | 1 cut(s) | 155 |
| Hpy188I | TCNGA | 1 cut(s) | 261 |
| Hpy188III | TCNNGA | 1 cut(s) | 206 |
| HpyCH4IV | ACGT | 1 cut(s) | 22 |
| HpyCH4V | TGCA | 3 cut(s) | 20, 89, 94 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 110 |
| HpyF3I | CTNAG | 2 cut(s) | 207, 260 |
| HpySE526I | ACGT | 1 cut(s) | 22 |
| Kzo9I | GATC | 1 cut(s) | 256 |
| LpnPI | CCDG | 4 cut(s) | 86, 90, 113, 219 |
| LweI | GCATC | 3 cut(s) | 7, 100, 123 |
| MaeI | CTAG | 1 cut(s) | 180 |
| MaeII | ACGT | 1 cut(s) | 22 |
| MalI | GATC | 1 cut(s) | 258 |
| MboI | GATC | 1 cut(s) | 256 |
| MluCI | AATT | 2 cut(s) | 52, 306 |
| MspR9I | CCNGG | 1 cut(s) | 101 |
| Mva1269I | GAATGC | 2 cut(s) | 45, 196 |
| MvaI | CCWGG | 1 cut(s) | 101 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 110 |
| NdeII | GATC | 1 cut(s) | 256 |
| PctI | GAATGC | 2 cut(s) | 45, 196 |
| Ppu21I | YACGTR | 1 cut(s) | 23 |
| Psp6I | CCWGG | 1 cut(s) | 99 |
| PspGI | CCWGG | 1 cut(s) | 99 |
| Sau3AI | GATC | 1 cut(s) | 256 |
| ScrFI | CCNGG | 1 cut(s) | 101 |
| SetI | ASST | 6 cut(s) | 25, 30, 123, 145, 253, 282 |
| SfaNI | GCATC | 3 cut(s) | 7, 100, 123 |
| SmlI | CTYRAG | 2 cut(s) | 44, 235 |
| SmoI | CTYRAG | 2 cut(s) | 44, 235 |
| SpeI | ACTAGT | 1 cut(s) | 179 |
| Sse9I | AATT | 2 cut(s) | 52, 306 |
| SspMI | CTAG | 1 cut(s) | 180 |
| StyD4I | CCNGG | 1 cut(s) | 99 |
| StyI | CCWWGG | 2 cut(s) | 195, 247 |
| TaiI | ACGT | 1 cut(s) | 25 |
| TasI | AATT | 2 cut(s) | 52, 306 |
| XapI | RAATTY | 1 cut(s) | 52 |
| XspI | CTAG | 1 cut(s) | 180 |