Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0006223

Physical Location & Seq

Genomic Coordinates Reverse (-)

1094758 .. 1099653

Gene Structure 4896 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000005715

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1446 bp

ATGAAAAACAATAAAAGGAAGAAGAGCAAAATCTCAGACGGAGGAGCAGAAGAAGCAAAACCCGTCGCCAAAGTCCCCAAAACGAGCAAGCCGGAGATGGAGGCGGGGTCAGCCGAGGAGCAGCAGAGCATGGTGGCTCTGTTTATGGAGATCGCCGCTGGCCAGACCGACGAGACCGCCCGGCGGTTTTTGCAGGCTACGGGTTGGAACCTAGAGGAAGCACTTCAGCTGTTTTATGTGGGTAATGAAGCGGGGGCTGTGCCTCCGCCGCAGCCACCGGCTGAGAATGCTAGTAATTTGGCTGAACAGAGTTCTGGGGTGAATGAGAATGTGGCACAATATGGTGAGGATGAAGTGCGTGCCCCGATGCCGGTTATAAGGGACGTCCTGTATGATGATGTTGCACTCTATGGGGCTGGGTTGCTTTCATCTACATCACCAATGACAAGACTTCCAGTAAGCGAATCGGGTGTGATTGCATTCCGCAACTTTAATGAGGAATTGAAACATCCTGGAGTATGGGAATCAAATGAAGGTGCTACATCCGCGACAGATAGCTCTCGAGATAATCTCGCTTCCTTGTATCGTCCTCCCTTTCAGCTACTGTTCCAGGGTTCTTTTGAAAAGGCAAAGAGTGCTGCTTCCGTCCAGGACAAATGGCTCATGGTGAACTTGCAATCCAATTCGGAGTTCAGCTCCCATATGCTTAATCGAGACACCTGGGCTAATGAAGCTGTTTCTCAAACCATTATCACTAATTTTATCTTCTGGCAGACATATGATGATACAACTGAAGGCAGGAAGGTTTGTACGTACTACAAATTGGAATCTATGCCTGTTGTTCTCATCATTGACCCCATCACTGGGCAGAAAATGCGTTCATGGAATGGAATGGTTCAACCGGAACGTTTGCTGGAGGATCTATTACCCTTCATGGATAGTGGTCCCAGGGATCATCATTTAGCTTTATCCAACAAGCGGCCTAGGGAAAGTTCTCTGCCTCAGCCACAGAATACAAATGAACAAGCTAATGAACAAGATGAGGAAGTGCAACGTGCATTAGCAGCTTCAATGGGGAGCATGAAGGAGACAAGTGGAACCATTTCGAAAGATGAAGAAGAGATCATTACTGACAAGGAAGAAGAAACATCCTTACCAAAAGTGCCTACATATCCACCTTTGCCTGAAGAACCCAAGGGTGATAAGAGCCTCATTTGCAGAGTTGGAGTCCGTCTTCCAGATGGGCGCAGGGCCCAGCGCAATTTTCTACGTATTGATCCTATTCAGCTCTTGTGGTCGTTCTGCTATTCACAGTTGAAGGAAGAAAGGCCCATTCGACTGACTCATGCAGTCCCTGGAGCTACAAAGTGTCTGGATTATGATTGTGAATCTACATTTGAAGAGTCTGGTCTCCCCAACACTATGGTCTCAGTCACTTGGGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0019538 GO:0019941 GO:0030163 GO:0030674 GO:0032182 GO:0043130 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044464 GO:0051603 GO:0060090 GO:0071704 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Thioredoxin_7 UBA_4 UBX

Protein Analysis

482

Amino Acids

53.68

Weight (kDa)

4.85

Isoelectric Point (pI)

55.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UBA_8	PF22566	40 - 82	1e-06	UBA-like domain
UBA_4	PF14555	43 - 80	1.3e-11	UBA-like domain
Thioredoxin_7	PF13899	206 - 286	7.5e-13	Thioredoxin-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006223)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14570 AT1G14570 AT1G14570 AT1G14570
fragaria_vesca	FvH4_4g36080 FvH4_4g36080 FvH4_4g36080 FvH4_4g36080
malus_domestica	MD13G1012500.v1.1 MD16G1009200.v1.1
prunus_persica	Prupe.1G341400_v2.0.a1 Prupe.1G341400_v2.0.a1 Prupe.1G341400_v2.0.a1
pyrus_communis	pycom13g01000 pycom16g00890
rosa_chinensis	RchiOBHm_Chr4g0445701
rosa_laevigata	RLG00000005715
rosa_multiflora	Rmu_sc0000961.1_g000019 Rmu_sc0002957.1_g000001 Rmu_sc0003637.1_g000013
rosa_roxburghii	Rroxscaffold_5G00386190
rosa_rugosa	Rorug03G0328200 Rorug04G0365000
rosa_samantha	Rh4AG425900 Rh4CG452900 Rh4DG434100
rosa_wichuraiana	Rw4G036480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	377
AatII	GACGTC	1 cut(s)	387
AccII	CGCG	1 cut(s)	548
AclI	AACGTT	1 cut(s)	907
AclWI	GGATC	3 cut(s)	927, 960, 1271
AcoI	YGGCCR	1 cut(s)	160
AcuI	CTGAAG	3 cut(s)	209, 813, 1206
AcyI	GRCGYC	1 cut(s)	384
AfaI	GTAC	2 cut(s)	811, 815
AfiI	CCNNNNNNNGG	5 cut(s)	183, 370, 863, 864, 978
AgsI	TTSAA	6 cut(s)	505, 623, 899, 1071, 1318, 1400
AjnI	CCWGG	6 cut(s)	511, 609, 648, 719, 947, 1354
AjuI	GAANNNNNNNTTGG	2 cut(s)	674, 706
AloI	GAACNNNNNNTCC	2 cut(s)	662, 694
Alw26I	GTCTC	5 cut(s)	167, 708, 1082, 1415, 1432
AlwI	GGATC	3 cut(s)	927, 960, 1271
AlwNI	CAGNNNCTG	2 cut(s)	604, 1355
Ama87I	CYCGRG	1 cut(s)	561
AoxI	GGCC	4 cut(s)	160, 980, 1251, 1328
ApaI	GGGCCC	1 cut(s)	1255
ApeKI	GCWGC	4 cut(s)	121, 271, 638, 1064
Asp700I	GAANNNNTTC	2 cut(s)	222, 1102
AspA2I	CCTAGG	1 cut(s)	983
AspLEI	GCGC	2 cut(s)	1248, 1260
AspS9I	GGNCC	4 cut(s)	944, 1251, 1252, 1329
AsuC2I	CCSGG	1 cut(s)	181
AsuHPI	GGTGA	5 cut(s)	331, 356, 429, 679, 1211
AsuII	TTCGAA	1 cut(s)	1106
AvaI	CYCGRG	1 cut(s)	561
AvaII	GGWCC	1 cut(s)	944
AvrII	CCTAGG	1 cut(s)	983
BaeGI	GKGCMC	2 cut(s)	364, 1255
BalI	TGGCCA	1 cut(s)	162
BanII	GRGCYC	1 cut(s)	1255
BbsI	GAAGAC	1 cut(s)	1226
BbvCI	CCTCAGC	1 cut(s)	1002
BbvI	GCAGC	4 cut(s)	133, 283, 625, 1076
BccI	CCATC	3 cut(s)	91, 866, 1235
BciT130I	CCWGG	6 cut(s)	513, 611, 650, 721, 949, 1356
BcnI	CCSGG	1 cut(s)	181
BcoDI	GTCTC	5 cut(s)	167, 708, 1082, 1415, 1432
BfaI	CTAG	3 cut(s)	212, 291, 984
BisI	GCNGC	7 cut(s)	122, 156, 269, 272, 639, 980, 1065
BlnI	CCTAGG	1 cut(s)	983
BlsI	GCNGC	7 cut(s)	123, 157, 270, 273, 640, 981, 1066
Bme1390I	CCNGG	7 cut(s)	181, 513, 611, 650, 721, 949, 1356
Bme18I	GGWCC	1 cut(s)	944
BmeT110I	CYCGRG	1 cut(s)	561
BmgT120I	GGNCC	4 cut(s)	944, 1251, 1252, 1329
BmiI	GGNNCC	4 cut(s)	209, 946, 1099, 1253
BmrFI	CCNGG	7 cut(s)	181, 513, 611, 650, 721, 949, 1356
BmrI	ACTGGG	1 cut(s)	873
BmsI	GCATC	1 cut(s)	357
BmuI	ACTGGG	1 cut(s)	873
BpiI	GAAGAC	1 cut(s)	1226
BplI	GAGNNNNNCTC	4 cut(s)	555, 587, 680, 712
BpmI	CTGGAG	3 cut(s)	534, 935, 1377
Bpu10I	CCTNAGC	1 cut(s)	1002
Bpu14I	TTCGAA	1 cut(s)	1106
BpuMI	CCSGG	1 cut(s)	181
BsaAI	YACGTR	2 cut(s)	813, 1271
BsaHI	GRCGYC	1 cut(s)	384
BsaI	GGTCTC	3 cut(s)	167, 1415, 1432
BsaJI	CCNNGG	8 cut(s)	114, 610, 720, 947, 948, 983, 1194, 1354
BsaWI	WCCGGW	1 cut(s)	901
BsaXI	ACNNNNNCTCC	2 cut(s)	92, 122
Bsc4I	CCNNNNNNNGG	5 cut(s)	183, 370, 863, 864, 978
Bse118I	RCCGGY	2 cut(s)	277, 370
Bse1I	ACTGG	2 cut(s)	455, 868
BseBI	CCWGG	6 cut(s)	513, 611, 650, 721, 949, 1356
BseDI	CCNNGG	8 cut(s)	114, 610, 720, 947, 948, 983, 1194, 1354
BseGI	GGATG	4 cut(s)	355, 508, 542, 1148
BseLI	CCNNNNNNNGG	5 cut(s)	183, 370, 863, 864, 978
BseMII	CTCAG	4 cut(s)	48, 273, 1016, 1443
BseNI	ACTGG	2 cut(s)	455, 868
BseRI	GAGGAG	2 cut(s)	57, 131
BseSI	GKGCMC	2 cut(s)	364, 1255
BseXI	GCAGC	4 cut(s)	133, 283, 625, 1076
BseYI	CCCAGC	2 cut(s)	416, 1254
Bsh1236I	CGCG	1 cut(s)	548
BshFI	GGCC	4 cut(s)	162, 982, 1253, 1330
BsiHKCI	CYCGRG	1 cut(s)	561
BsiSI	CCGG	5 cut(s)	92, 181, 278, 371, 902
BslFI	GGGAC	4 cut(s)	59, 395, 930, 1337
BslI	CCNNNNNNNGG	5 cut(s)	183, 370, 863, 864, 978
BsmAI	GTCTC	5 cut(s)	167, 708, 1082, 1415, 1432
BsmFI	GGGAC	4 cut(s)	59, 395, 930, 1337
BsmI	GAATGC	2 cut(s)	292, 479
BsnI	GGCC	4 cut(s)	162, 982, 1253, 1330
Bso31I	GGTCTC	3 cut(s)	167, 1415, 1432
BsoBI	CYCGRG	1 cut(s)	561
Bsp119I	TTCGAA	1 cut(s)	1106
Bsp120I	GGGCCC	1 cut(s)	1251
Bsp1286I	GDGCHC	2 cut(s)	364, 1255
Bsp143I	GATC	5 cut(s)	150, 919, 952, 1122, 1276
BspANI	GGCC	4 cut(s)	162, 982, 1253, 1330
BspCNI	CTCAG	4 cut(s)	47, 274, 1015, 1442
BspFNI	CGCG	1 cut(s)	548
BspLI	GGNNCC	4 cut(s)	209, 946, 1099, 1253
BspPI	GGATC	3 cut(s)	927, 960, 1271
BspQI	GCTCTTC	1 cut(s)	17
BspT104I	TTCGAA	1 cut(s)	1106
BspTNI	GGTCTC	3 cut(s)	167, 1415, 1432
BsrFI	RCCGGY	2 cut(s)	277, 370
BsrI	ACTGG	2 cut(s)	455, 868
BssAI	RCCGGY	2 cut(s)	277, 370
BssECI	CCNNGG	8 cut(s)	114, 610, 720, 947, 948, 983, 1194, 1354
BssMI	GATC	5 cut(s)	150, 919, 952, 1122, 1276
BssNI	GRCGYC	1 cut(s)	384
BssT1I	CCWWGG	2 cut(s)	983, 1194
Bst2UI	CCWGG	6 cut(s)	513, 611, 650, 721, 949, 1356
Bst4CI	ACNGT	2 cut(s)	606, 1314
Bst6I	CTCTTC	3 cut(s)	17, 1113, 1395
BstACI	GRCGYC	1 cut(s)	384
BstAPI	GCANNNNNTGC	2 cut(s)	635, 874
BstBAI	YACGTR	2 cut(s)	813, 1271
BstBI	TTCGAA	1 cut(s)	1106
BstC8I	GCNNGC	4 cut(s)	89, 160, 195, 360
BstDEI	CTNAG	4 cut(s)	34, 282, 1002, 1429
BstF5I	GGATG	4 cut(s)	355, 508, 542, 1148
BstFNI	CGCG	1 cut(s)	548
BstHHI	GCGC	2 cut(s)	1248, 1260
BstKTI	GATC	5 cut(s)	153, 922, 955, 1125, 1279
BstMAI	GTCTC	5 cut(s)	167, 708, 1082, 1415, 1432
BstMBI	GATC	5 cut(s)	150, 919, 952, 1122, 1276
BstNI	CCWGG	6 cut(s)	513, 611, 650, 721, 949, 1356
BstSCI	CCNGG	7 cut(s)	179, 511, 609, 648, 719, 947, 1354
BstSLI	GKGCMC	2 cut(s)	364, 1255
BstSNI	TACGTA	2 cut(s)	813, 1271
BstUI	CGCG	1 cut(s)	548
BstV1I	GCAGC	4 cut(s)	133, 283, 625, 1076
BstV2I	GAAGAC	1 cut(s)	1226
BstX2I	RGATCY	1 cut(s)	919
BstXI	CCANNNNNNTGG	1 cut(s)	1423
BstYI	RGATCY	1 cut(s)	919
BsuRI	GGCC	4 cut(s)	162, 982, 1253, 1330
BtsCI	GGATG	4 cut(s)	355, 508, 542, 1148
BtsIMutI	CAGTG	1 cut(s)	861
Cac8I	GCNNGC	4 cut(s)	89, 160, 195, 360
CaiI	CAGNNNCTG	2 cut(s)	604, 1355
CfoI	GCGC	2 cut(s)	1248, 1260
Cfr10I	RCCGGY	2 cut(s)	277, 370
Cfr13I	GGNCC	4 cut(s)	944, 1251, 1252, 1329
Csp6I	GTAC	2 cut(s)	810, 814
CviAII	CATG	6 cut(s)	130, 664, 882, 934, 1081, 1346
CviQI	GTAC	2 cut(s)	810, 814
DdeI	CTNAG	4 cut(s)	34, 282, 1002, 1429
DpnI	GATC	5 cut(s)	152, 921, 954, 1124, 1278
DpnII	GATC	5 cut(s)	150, 919, 952, 1122, 1276
EaeI	YGGCCR	1 cut(s)	160
Eam1104I	CTCTTC	3 cut(s)	17, 1113, 1395
EarI	CTCTTC	3 cut(s)	17, 1113, 1395
EciI	GGCGGA	1 cut(s)	255
Eco105I	TACGTA	2 cut(s)	813, 1271
Eco130I	CCWWGG	2 cut(s)	983, 1194
Eco24I	GRGCYC	1 cut(s)	1255
Eco31I	GGTCTC	3 cut(s)	167, 1415, 1432
Eco47I	GGWCC	1 cut(s)	944
Eco57I	CTGAAG	3 cut(s)	209, 813, 1206
Eco88I	CYCGRG	1 cut(s)	561
EcoO109I	RGGNCCY	1 cut(s)	1251
EcoRII	CCWGG	6 cut(s)	511, 609, 648, 719, 947, 1354
EcoT14I	CCWWGG	2 cut(s)	983, 1194
EcoT38I	GRGCYC	1 cut(s)	1255
ErhI	CCWWGG	2 cut(s)	983, 1194
FaeI	CATG	6 cut(s)	133, 667, 885, 937, 1084, 1349
FaqI	GGGAC	4 cut(s)	59, 395, 930, 1337
FatI	CATG	6 cut(s)	129, 663, 881, 933, 1080, 1345
FauI	CCCGC	2 cut(s)	97, 244
FauNDI	CATATG	2 cut(s)	702, 778
Fnu4HI	GCNGC	7 cut(s)	122, 156, 269, 272, 639, 980, 1065
FokI	GGATG	4 cut(s)	362, 495, 529, 1135
FriOI	GRGCYC	1 cut(s)	1255
Fsp4HI	GCNGC	7 cut(s)	122, 156, 269, 272, 639, 980, 1065
FspBI	CTAG	3 cut(s)	212, 291, 984
GlaI	GCGC	2 cut(s)	1247, 1259
GluI	GCNGC	7 cut(s)	122, 156, 269, 272, 639, 980, 1065
GsaI	CCCAGC	2 cut(s)	420, 1258
GsuI	CTGGAG	3 cut(s)	534, 935, 1377
HaeIII	GGCC	4 cut(s)	162, 982, 1253, 1330
HapII	CCGG	5 cut(s)	92, 181, 278, 371, 902
HhaI	GCGC	2 cut(s)	1248, 1260
Hin1I	GRCGYC	1 cut(s)	384
Hin1II	CATG	6 cut(s)	133, 667, 885, 937, 1084, 1349
Hin6I	GCGC	2 cut(s)	1246, 1258
HinP1I	GCGC	2 cut(s)	1246, 1258
HinfI	GANTC	7 cut(s)	464, 524, 827, 1227, 1342, 1388, 1403
HpaII	CCGG	5 cut(s)	92, 181, 278, 371, 902
HphI	GGTGA	5 cut(s)	331, 356, 429, 679, 1211
Hpy166II	GTNNAC	1 cut(s)	670
Hpy188I	TCNGA	2 cut(s)	37, 688
Hpy188III	TCNNGA	5 cut(s)	561, 563, 713, 1238, 1373
Hpy8I	GTNNAC	1 cut(s)	670
Hpy99I	CGWCG	2 cut(s)	68, 173
HpyAV	CCTTC	6 cut(s)	527, 788, 796, 940, 1078, 1312
HpyCH4III	ACNGT	2 cut(s)	606, 1314
HpyCH4IV	ACGT	5 cut(s)	384, 812, 907, 1054, 1270
HpyCH4V	TGCA	8 cut(s)	193, 404, 479, 676, 1051, 1058, 1218, 1349
HpyF3I	CTNAG	4 cut(s)	34, 282, 1002, 1429
HpySE526I	ACGT	5 cut(s)	384, 812, 907, 1054, 1270
Hsp92I	GRCGYC	1 cut(s)	384
Hsp92II	CATG	6 cut(s)	133, 667, 885, 937, 1084, 1349
HspAI	GCGC	2 cut(s)	1246, 1258
Kzo9I	GATC	5 cut(s)	150, 919, 952, 1122, 1276
LguI	GCTCTTC	1 cut(s)	17
LmnI	GCTCC	5 cut(s)	44, 118, 701, 1077, 1358
Lsp1109I	GCAGC	4 cut(s)	133, 283, 625, 1076
LweI	GCATC	1 cut(s)	357
MaeI	CTAG	3 cut(s)	212, 291, 984
MaeII	ACGT	5 cut(s)	384, 812, 907, 1054, 1270
MaeIII	GTNAC	1 cut(s)	1432
MalI	GATC	5 cut(s)	152, 921, 954, 1124, 1278
MboI	GATC	5 cut(s)	150, 919, 952, 1122, 1276
MflI	RGATCY	1 cut(s)	919
MhlI	GDGCHC	2 cut(s)	364, 1255
MlsI	TGGCCA	1 cut(s)	162
MluCI	AATT	6 cut(s)	295, 500, 682, 757, 821, 1261
MluNI	TGGCCA	1 cut(s)	162
MlyI	GAGTC	3 cut(s)	1236, 1336, 1412
MmeI	TCCRAC	3 cut(s)	185, 996, 1204
Mox20I	TGGCCA	1 cut(s)	162
MroXI	GAANNNNTTC	2 cut(s)	222, 1102
MscI	TGGCCA	1 cut(s)	162
MseI	TTAA	2 cut(s)	492, 708
Msp20I	TGGCCA	1 cut(s)	162
MspA1I	CMGCKG	2 cut(s)	158, 229
MspI	CCGG	5 cut(s)	92, 181, 278, 371, 902
MspR9I	CCNGG	7 cut(s)	181, 513, 611, 650, 721, 949, 1356
Mva1269I	GAATGC	2 cut(s)	292, 479
MvaI	CCWGG	6 cut(s)	513, 611, 650, 721, 949, 1356
MvnI	CGCG	1 cut(s)	548
NciI	CCSGG	1 cut(s)	181
NdeI	CATATG	2 cut(s)	702, 778
NdeII	GATC	5 cut(s)	150, 919, 952, 1122, 1276
NlaIII	CATG	6 cut(s)	133, 667, 885, 937, 1084, 1349
NlaIV	GGNNCC	4 cut(s)	209, 946, 1099, 1253
NmeAIII	GCCGAG	1 cut(s)	139
NmuCI	GTSAC	1 cut(s)	1432
NspV	TTCGAA	1 cut(s)	1106
PaeR7I	CTCGAG	1 cut(s)	561
PasI	CCCWGGG	1 cut(s)	948
PciSI	GCTCTTC	1 cut(s)	17
PctI	GAATGC	2 cut(s)	292, 479
PdmI	GAANNNNTTC	2 cut(s)	222, 1102
PfeI	GAWTC	4 cut(s)	464, 524, 827, 1388
PfoI	TCCNGGA	2 cut(s)	511, 648
PkrI	GCNGC	7 cut(s)	123, 157, 270, 273, 640, 981, 1066
PleI	GAGTC	3 cut(s)	1235, 1336, 1411
PpsI	GAGTC	3 cut(s)	1235, 1336, 1411
Ppu21I	YACGTR	2 cut(s)	813, 1271
PsiI	TTATAA	1 cut(s)	377
Psp1406I	AACGTT	1 cut(s)	907
Psp6I	CCWGG	6 cut(s)	511, 609, 648, 719, 947, 1354
PspFI	CCCAGC	2 cut(s)	416, 1254
PspGI	CCWGG	6 cut(s)	511, 609, 648, 719, 947, 1354
PspN4I	GGNNCC	4 cut(s)	209, 946, 1099, 1253
PspOMI	GGGCCC	1 cut(s)	1251
PspPI	GGNCC	4 cut(s)	944, 1251, 1252, 1329
PstNI	CAGNNNCTG	2 cut(s)	604, 1355
PsuI	RGATCY	1 cut(s)	919
PvuII	CAGCTG	1 cut(s)	229
RsaI	GTAC	2 cut(s)	811, 815
RsaNI	GTAC	2 cut(s)	810, 814
SapI	GCTCTTC	1 cut(s)	17
SaqAI	TTAA	2 cut(s)	492, 708
SatI	GCNGC	7 cut(s)	122, 156, 269, 272, 639, 980, 1065
Sau3AI	GATC	5 cut(s)	150, 919, 952, 1122, 1276
Sau96I	GGNCC	4 cut(s)	944, 1251, 1252, 1329
SchI	GAGTC	3 cut(s)	1236, 1336, 1412
ScrFI	CCNGG	7 cut(s)	181, 513, 611, 650, 721, 949, 1356
SduI	GDGCHC	2 cut(s)	364, 1255
SfaNI	GCATC	1 cut(s)	357
Sfr274I	CTCGAG	1 cut(s)	561
SfuI	TTCGAA	1 cut(s)	1106
SinI	GGWCC	1 cut(s)	944
SlaI	CTCGAG	1 cut(s)	561
SmlI	CTYRAG	1 cut(s)	561
SmoI	CTYRAG	1 cut(s)	561
SnaBI	TACGTA	2 cut(s)	813, 1271
Sse9I	AATT	6 cut(s)	295, 500, 682, 757, 821, 1261
SspMI	CTAG	3 cut(s)	212, 291, 984
StyD4I	CCNGG	7 cut(s)	179, 511, 609, 648, 719, 947, 1354
StyI	CCWWGG	2 cut(s)	983, 1194
TaaI	ACNGT	2 cut(s)	606, 1314
TaiI	ACGT	5 cut(s)	387, 815, 910, 1057, 1273
TaqI	TCGA	4 cut(s)	562, 712, 1106, 1336
TaqII	GACCGA	1 cut(s)	182
TasI	AATT	6 cut(s)	295, 500, 682, 757, 821, 1261
TauI	GCSGC	3 cut(s)	158, 271, 982
TfiI	GAWTC	4 cut(s)	464, 524, 827, 1388
Tru1I	TTAA	2 cut(s)	492, 708
Tru9I	TTAA	2 cut(s)	492, 708
TscAI	CASTG	1 cut(s)	868
TseFI	GTSAC	1 cut(s)	1432
TseI	GCWGC	4 cut(s)	121, 271, 638, 1064
Tsp45I	GTSAC	1 cut(s)	1432
TspGWI	ACGGA	3 cut(s)	54, 634, 1220
TspRI	CASTG	1 cut(s)	868
VpaK11BI	GGWCC	1 cut(s)	944
XhoI	CTCGAG	1 cut(s)	561
XmaJI	CCTAGG	1 cut(s)	983
XmnI	GAANNNNTTC	2 cut(s)	222, 1102
XspI	CTAG	3 cut(s)	212, 291, 984
ZraI	GACGTC	1 cut(s)	385

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.