Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0006223

Physical Location & Seq

Genomic Coordinates Forward (+)

68610522 .. 68615847

Gene Structure 5326 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG452900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1350 bp

ATGGAGGCGGGGTCAGCCGAGGAGCAGCAGAGCATGGTGGCTCTGTTTATGGAGATCGCCGCCGGCCAGACCGACGAGACCGCCCGGCGGTTTTTGCAGGCTACGGGTTGGAACCTAGAGGAAGCACTTCAGCTGTTTTATGTGGGTAATGAAGCGGGGGCGATGGCTCCGCCGCAGCTGCCAGCTGAGAATGCTAGTAATTTGGCTGAACAGAGTTCTGGGGTGAATGAGAATGTGGCACAATATGGTGAGGATGAAGTGCGTGCCCCGATGCCGGTTATAAGGGACGTCCTGTATGATGATGTTGCGCTCTATGGGGCTGGGTTGCTTTCATCTACATCACCAATGACAAGACTTCCAGTAAACGAATCGGGTGTGATTGCATTCCGCAACTTTAATGAGGAATTGAAACATCCTGGAGTATGGGAATCAAATGAAGGTGCTTCATCCGCAACAGATAGCTCTCGAGATAATCTTGCTTCCTTGTATCGTCCTCCCTTTCAGCTACTGTTCCAGGGTTCTTTTGAAAAGGCAAAGAGTGCTGCTTCCGTCCAGGACAAATGGCTCATGGTGAACTTGCAATCCAATTCGGAGTTCAGCTCCCATATGCTTAATCGAGACACCTGGGCTAATGAAGCTGTTTCTCAAACCATTATCACTAATTTTATCTTCTGGCAGACATATGATGATACAACTGAAGGCAGGAAGGTTTGTACGTACTACAAATTGGAATCTATGCCTGTTGTTCTCATCATTGACCCCATCACTGGGCAGAAAATGCGTTCATGGAATGGAATGGTTCAACCAGAACGTTTGCTGGAGGATCTATTACCCTTCATGGATAGTGGTCCCAGGGATCATCATTTAGCTTTATCCAACAAGCGGCCTAGGGAAAGTTCTCTGCCTCAGCCACAGAATACAAATGAACAAGCTAATGAAGAAGATGAGGAAGTGCAACGTGCATTAGCAGCTTCAATGGGGAGCATGAAGGAGACAAGTGGAACCATTTCGAAAGATGAAGAAGAGATCATTACTGACAAGGAAGAAAAAACATCCTTACCTAAAGTGCCTACATATCCACCTTTGCCTGAAGAACCCAAGGGTGATAAGAGCCTTATTTGCAGAGTTGGAGTCCGTCTTCCAGATGGGCGCAGGGCCCAGCGCAATTTTCTACGGATTGATCCTATTCAGCTTTTGTGGTCATTCTGCTATTCGCAGTTGAAGGAAGAAAGGCCCATTCGACTGACTCATGCAGTCCCCGGAGCTACAAAGTGTCTGGATTATGATTGTGAATCTACATTTGAAGAGTCTGGTCTCCCCAACACTATGGTTTCAGTCACTTGGGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0019538 GO:0019941 GO:0030163 GO:0030674 GO:0032182 GO:0043130 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044464 GO:0051603 GO:0060090 GO:0071704 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Thioredoxin_7 UBA_4 UBX

Protein Analysis

449

Amino Acids

50.25

Weight (kDa)

4.66

Isoelectric Point (pI)

54.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UBA_8	PF22566	8 - 50	9.4e-07	UBA-like domain
UBA_4	PF14555	11 - 48	1.2e-11	UBA-like domain
Thioredoxin_7	PF13899	174 - 254	6.7e-13	Thioredoxin-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006223)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14570 AT1G14570 AT1G14570 AT1G14570
fragaria_vesca	FvH4_4g36080 FvH4_4g36080 FvH4_4g36080 FvH4_4g36080
malus_domestica	MD13G1012500.v1.1 MD16G1009200.v1.1
prunus_persica	Prupe.1G341400_v2.0.a1 Prupe.1G341400_v2.0.a1 Prupe.1G341400_v2.0.a1
pyrus_communis	pycom13g01000 pycom16g00890
rosa_chinensis	RchiOBHm_Chr4g0445701
rosa_laevigata	RLG00000005715
rosa_multiflora	Rmu_sc0000961.1_g000019 Rmu_sc0002957.1_g000001 Rmu_sc0003637.1_g000013
rosa_roxburghii	Rroxscaffold_5G00386190
rosa_rugosa	Rorug03G0328200 Rorug04G0365000
rosa_samantha	Rh4AG425900 Rh4CG452900 Rh4DG434100
rosa_wichuraiana	Rw4G036480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	281
AatII	GACGTC	1 cut(s)	291
AclI	AACGTT	1 cut(s)	811
AclWI	GGATC	3 cut(s)	831, 864, 1175
AcoI	YGGCCR	1 cut(s)	64
AcuI	CTGAAG	3 cut(s)	113, 717, 1110
AcyI	GRCGYC	1 cut(s)	288
AfaI	GTAC	2 cut(s)	715, 719
AfiI	CCNNNNNNNGG	5 cut(s)	87, 274, 767, 768, 882
AgsI	TTSAA	6 cut(s)	409, 527, 803, 975, 1222, 1304
AjnI	CCWGG	5 cut(s)	415, 513, 552, 623, 851
AjuI	GAANNNNNNNTTGG	2 cut(s)	578, 610
AloI	GAACNNNNNNTCC	2 cut(s)	566, 598
Alw26I	GTCTC	4 cut(s)	71, 612, 986, 1319
AlwI	GGATC	3 cut(s)	831, 864, 1175
AlwNI	CAGNNNCTG	1 cut(s)	508
Ama87I	CYCGRG	1 cut(s)	465
AoxI	GGCC	4 cut(s)	64, 884, 1155, 1232
ApaI	GGGCCC	1 cut(s)	1159
ApeKI	GCWGC	5 cut(s)	25, 175, 178, 542, 968
Asp700I	GAANNNNTTC	2 cut(s)	126, 1006
AspA2I	CCTAGG	1 cut(s)	887
AspLEI	GCGC	3 cut(s)	310, 1152, 1164
AspS9I	GGNCC	4 cut(s)	848, 1155, 1156, 1233
AsuC2I	CCSGG	2 cut(s)	85, 1260
AsuHPI	GGTGA	5 cut(s)	235, 260, 333, 583, 1115
AsuII	TTCGAA	1 cut(s)	1010
AvaI	CYCGRG	1 cut(s)	465
AvaII	GGWCC	1 cut(s)	848
AvrII	CCTAGG	1 cut(s)	887
BaeGI	GKGCMC	2 cut(s)	268, 1159
BanII	GRGCYC	1 cut(s)	1159
BbsI	GAAGAC	1 cut(s)	1130
BbvCI	CCTCAGC	1 cut(s)	906
BbvI	GCAGC	5 cut(s)	37, 165, 187, 529, 980
BccI	CCATC	3 cut(s)	157, 770, 1139
BciT130I	CCWGG	5 cut(s)	417, 515, 554, 625, 853
BcnI	CCSGG	2 cut(s)	85, 1260
BcoDI	GTCTC	4 cut(s)	71, 612, 986, 1319
BfaI	CTAG	3 cut(s)	116, 195, 888
BisI	GCNGC	8 cut(s)	26, 60, 173, 176, 179, 543, 884, 969
BlnI	CCTAGG	1 cut(s)	887
BlsI	GCNGC	8 cut(s)	27, 61, 174, 177, 180, 544, 885, 970
Bme1390I	CCNGG	7 cut(s)	85, 417, 515, 554, 625, 853, 1260
Bme18I	GGWCC	1 cut(s)	848
BmeT110I	CYCGRG	1 cut(s)	465
BmgT120I	GGNCC	4 cut(s)	848, 1155, 1156, 1233
BmiI	GGNNCC	5 cut(s)	113, 168, 850, 1003, 1157
BmrFI	CCNGG	7 cut(s)	85, 417, 515, 554, 625, 853, 1260
BmrI	ACTGGG	1 cut(s)	777
BmsI	GCATC	1 cut(s)	261
BmuI	ACTGGG	1 cut(s)	777
BpiI	GAAGAC	1 cut(s)	1130
BplI	GAGNNNNNCTC	2 cut(s)	584, 616
BpmI	CTGGAG	2 cut(s)	438, 839
Bpu10I	CCTNAGC	1 cut(s)	906
Bpu14I	TTCGAA	1 cut(s)	1010
BpuMI	CCSGG	2 cut(s)	85, 1260
BsaAI	YACGTR	1 cut(s)	717
BsaHI	GRCGYC	1 cut(s)	288
BsaI	GGTCTC	2 cut(s)	71, 1319
BsaJI	CCNNGG	8 cut(s)	18, 514, 624, 851, 852, 887, 1098, 1258
BsaXI	ACNNNNNCTCC	1 cut(s)	26
Bsc4I	CCNNNNNNNGG	5 cut(s)	87, 274, 767, 768, 882
Bse118I	RCCGGY	2 cut(s)	62, 274
Bse1I	ACTGG	2 cut(s)	359, 772
BseBI	CCWGG	5 cut(s)	417, 515, 554, 625, 853
BseDI	CCNNGG	8 cut(s)	18, 514, 624, 851, 852, 887, 1098, 1258
BseGI	GGATG	4 cut(s)	259, 412, 446, 1052
BseLI	CCNNNNNNNGG	5 cut(s)	87, 274, 767, 768, 882
BseMII	CTCAG	2 cut(s)	177, 920
BseNI	ACTGG	2 cut(s)	359, 772
BseRI	GAGGAG	1 cut(s)	35
BseSI	GKGCMC	2 cut(s)	268, 1159
BseXI	GCAGC	5 cut(s)	37, 165, 187, 529, 980
BseYI	CCCAGC	2 cut(s)	320, 1158
BshFI	GGCC	4 cut(s)	66, 886, 1157, 1234
BsiHKCI	CYCGRG	1 cut(s)	465
BsiSI	CCGG	4 cut(s)	63, 85, 275, 1260
BslFI	GGGAC	3 cut(s)	299, 834, 1241
BslI	CCNNNNNNNGG	5 cut(s)	87, 274, 767, 768, 882
BsmAI	GTCTC	4 cut(s)	71, 612, 986, 1319
BsmFI	GGGAC	3 cut(s)	299, 834, 1241
BsmI	GAATGC	2 cut(s)	196, 383
BsnI	GGCC	4 cut(s)	66, 886, 1157, 1234
Bso31I	GGTCTC	2 cut(s)	71, 1319
BsoBI	CYCGRG	1 cut(s)	465
Bsp119I	TTCGAA	1 cut(s)	1010
Bsp120I	GGGCCC	1 cut(s)	1155
Bsp1286I	GDGCHC	2 cut(s)	268, 1159
Bsp143I	GATC	5 cut(s)	54, 823, 856, 1026, 1180
BspANI	GGCC	4 cut(s)	66, 886, 1157, 1234
BspCNI	CTCAG	2 cut(s)	178, 919
BspLI	GGNNCC	5 cut(s)	113, 168, 850, 1003, 1157
BspPI	GGATC	3 cut(s)	831, 864, 1175
BspT104I	TTCGAA	1 cut(s)	1010
BspTNI	GGTCTC	2 cut(s)	71, 1319
BsrFI	RCCGGY	2 cut(s)	62, 274
BsrI	ACTGG	2 cut(s)	359, 772
BssAI	RCCGGY	2 cut(s)	62, 274
BssECI	CCNNGG	8 cut(s)	18, 514, 624, 851, 852, 887, 1098, 1258
BssMI	GATC	5 cut(s)	54, 823, 856, 1026, 1180
BssNI	GRCGYC	1 cut(s)	288
BssT1I	CCWWGG	2 cut(s)	887, 1098
Bst2UI	CCWGG	5 cut(s)	417, 515, 554, 625, 853
Bst4CI	ACNGT	1 cut(s)	510
Bst6I	CTCTTC	2 cut(s)	1017, 1299
BstACI	GRCGYC	1 cut(s)	288
BstAPI	GCANNNNNTGC	2 cut(s)	539, 778
BstBAI	YACGTR	1 cut(s)	717
BstBI	TTCGAA	1 cut(s)	1010
BstC8I	GCNNGC	4 cut(s)	64, 99, 183, 264
BstDEI	CTNAG	2 cut(s)	186, 906
BstF5I	GGATG	4 cut(s)	259, 412, 446, 1052
BstHHI	GCGC	3 cut(s)	310, 1152, 1164
BstKTI	GATC	5 cut(s)	57, 826, 859, 1029, 1183
BstMAI	GTCTC	4 cut(s)	71, 612, 986, 1319
BstMBI	GATC	5 cut(s)	54, 823, 856, 1026, 1180
BstNI	CCWGG	5 cut(s)	417, 515, 554, 625, 853
BstSCI	CCNGG	7 cut(s)	83, 415, 513, 552, 623, 851, 1258
BstSLI	GKGCMC	2 cut(s)	268, 1159
BstSNI	TACGTA	1 cut(s)	717
BstV1I	GCAGC	5 cut(s)	37, 165, 187, 529, 980
BstV2I	GAAGAC	1 cut(s)	1130
BstX2I	RGATCY	1 cut(s)	823
BstXI	CCANNNNNNTGG	1 cut(s)	1327
BstYI	RGATCY	1 cut(s)	823
BsuRI	GGCC	4 cut(s)	66, 886, 1157, 1234
BtgZI	GCGATG	1 cut(s)	176
BtsCI	GGATG	4 cut(s)	259, 412, 446, 1052
BtsIMutI	CAGTG	1 cut(s)	765
Cac8I	GCNNGC	4 cut(s)	64, 99, 183, 264
CaiI	CAGNNNCTG	1 cut(s)	508
CfoI	GCGC	3 cut(s)	310, 1152, 1164
Cfr10I	RCCGGY	2 cut(s)	62, 274
Cfr13I	GGNCC	4 cut(s)	848, 1155, 1156, 1233
Csp6I	GTAC	2 cut(s)	714, 718
CviAII	CATG	6 cut(s)	34, 568, 786, 838, 985, 1250
CviQI	GTAC	2 cut(s)	714, 718
DdeI	CTNAG	2 cut(s)	186, 906
DpnI	GATC	5 cut(s)	56, 825, 858, 1028, 1182
DpnII	GATC	5 cut(s)	54, 823, 856, 1026, 1180
EaeI	YGGCCR	1 cut(s)	64
Eam1104I	CTCTTC	2 cut(s)	1017, 1299
EarI	CTCTTC	2 cut(s)	1017, 1299
EciI	GGCGGA	1 cut(s)	159
Eco105I	TACGTA	1 cut(s)	717
Eco130I	CCWWGG	2 cut(s)	887, 1098
Eco24I	GRGCYC	1 cut(s)	1159
Eco31I	GGTCTC	2 cut(s)	71, 1319
Eco47I	GGWCC	1 cut(s)	848
Eco57I	CTGAAG	3 cut(s)	113, 717, 1110
Eco88I	CYCGRG	1 cut(s)	465
EcoO109I	RGGNCCY	1 cut(s)	1155
EcoRII	CCWGG	5 cut(s)	415, 513, 552, 623, 851
EcoT14I	CCWWGG	2 cut(s)	887, 1098
EcoT38I	GRGCYC	1 cut(s)	1159
ErhI	CCWWGG	2 cut(s)	887, 1098
FaeI	CATG	6 cut(s)	37, 571, 789, 841, 988, 1253
FaqI	GGGAC	3 cut(s)	299, 834, 1241
FatI	CATG	6 cut(s)	33, 567, 785, 837, 984, 1249
FauI	CCCGC	1 cut(s)	148
FauNDI	CATATG	2 cut(s)	606, 682
Fnu4HI	GCNGC	8 cut(s)	26, 60, 173, 176, 179, 543, 884, 969
FokI	GGATG	4 cut(s)	266, 399, 433, 1039
FriOI	GRGCYC	1 cut(s)	1159
Fsp4HI	GCNGC	8 cut(s)	26, 60, 173, 176, 179, 543, 884, 969
FspBI	CTAG	3 cut(s)	116, 195, 888
GlaI	GCGC	3 cut(s)	309, 1151, 1163
GluI	GCNGC	8 cut(s)	26, 60, 173, 176, 179, 543, 884, 969
GsaI	CCCAGC	2 cut(s)	324, 1162
GsuI	CTGGAG	2 cut(s)	438, 839
HaeIII	GGCC	4 cut(s)	66, 886, 1157, 1234
HapII	CCGG	4 cut(s)	63, 85, 275, 1260
HhaI	GCGC	3 cut(s)	310, 1152, 1164
Hin1I	GRCGYC	1 cut(s)	288
Hin1II	CATG	6 cut(s)	37, 571, 789, 841, 988, 1253
Hin6I	GCGC	3 cut(s)	308, 1150, 1162
HinP1I	GCGC	3 cut(s)	308, 1150, 1162
HinfI	GANTC	7 cut(s)	368, 428, 731, 1131, 1246, 1292, 1307
HpaII	CCGG	4 cut(s)	63, 85, 275, 1260
HphI	GGTGA	5 cut(s)	235, 260, 333, 583, 1115
Hpy166II	GTNNAC	2 cut(s)	364, 574
Hpy188I	TCNGA	1 cut(s)	592
Hpy188III	TCNNGA	5 cut(s)	465, 467, 617, 1142, 1277
Hpy8I	GTNNAC	2 cut(s)	364, 574
Hpy99I	CGWCG	1 cut(s)	77
HpyAV	CCTTC	6 cut(s)	431, 692, 700, 844, 982, 1216
HpyCH4III	ACNGT	1 cut(s)	510
HpyCH4IV	ACGT	4 cut(s)	288, 716, 811, 958
HpyCH4V	TGCA	7 cut(s)	97, 383, 580, 955, 962, 1122, 1253
HpyF3I	CTNAG	2 cut(s)	186, 906
HpySE526I	ACGT	4 cut(s)	288, 716, 811, 958
Hsp92I	GRCGYC	1 cut(s)	288
Hsp92II	CATG	6 cut(s)	37, 571, 789, 841, 988, 1253
HspAI	GCGC	3 cut(s)	308, 1150, 1162
KroI	GCCGGC	1 cut(s)	62
KroNI	GCCGGC	1 cut(s)	64
Kzo9I	GATC	5 cut(s)	54, 823, 856, 1026, 1180
LmnI	GCTCC	5 cut(s)	22, 172, 605, 981, 1262
Lsp1109I	GCAGC	5 cut(s)	37, 165, 187, 529, 980
LweI	GCATC	1 cut(s)	261
MaeI	CTAG	3 cut(s)	116, 195, 888
MaeII	ACGT	4 cut(s)	288, 716, 811, 958
MaeIII	GTNAC	1 cut(s)	1336
MalI	GATC	5 cut(s)	56, 825, 858, 1028, 1182
MboI	GATC	5 cut(s)	54, 823, 856, 1026, 1180
MflI	RGATCY	1 cut(s)	823
MhlI	GDGCHC	2 cut(s)	268, 1159
MluCI	AATT	6 cut(s)	199, 404, 586, 661, 725, 1165
MlyI	GAGTC	3 cut(s)	1140, 1240, 1316
MmeI	TCCRAC	3 cut(s)	89, 900, 1108
MnlI	CCTC	8 cut(s)	13, 112, 244, 394, 504, 814, 915, 940
MroNI	GCCGGC	1 cut(s)	62
MroXI	GAANNNNTTC	2 cut(s)	126, 1006
MseI	TTAA	2 cut(s)	396, 612
MspA1I	CMGCKG	3 cut(s)	133, 178, 185
MspI	CCGG	4 cut(s)	63, 85, 275, 1260
MspR9I	CCNGG	7 cut(s)	85, 417, 515, 554, 625, 853, 1260
Mva1269I	GAATGC	2 cut(s)	196, 383
MvaI	CCWGG	5 cut(s)	417, 515, 554, 625, 853
NaeI	GCCGGC	1 cut(s)	64
NciI	CCSGG	2 cut(s)	85, 1260
NdeI	CATATG	2 cut(s)	606, 682
NdeII	GATC	5 cut(s)	54, 823, 856, 1026, 1180
NgoMIV	GCCGGC	1 cut(s)	62
NlaIII	CATG	6 cut(s)	37, 571, 789, 841, 988, 1253
NlaIV	GGNNCC	5 cut(s)	113, 168, 850, 1003, 1157
NmeAIII	GCCGAG	1 cut(s)	43
NmuCI	GTSAC	1 cut(s)	1336
NspV	TTCGAA	1 cut(s)	1010
PaeR7I	CTCGAG	1 cut(s)	465
PasI	CCCWGGG	1 cut(s)	852
PctI	GAATGC	2 cut(s)	196, 383
PdiI	GCCGGC	1 cut(s)	64
PdmI	GAANNNNTTC	2 cut(s)	126, 1006
PfeI	GAWTC	4 cut(s)	368, 428, 731, 1292
PfoI	TCCNGGA	2 cut(s)	415, 552
PkrI	GCNGC	8 cut(s)	27, 61, 174, 177, 180, 544, 885, 970
PleI	GAGTC	3 cut(s)	1139, 1240, 1315
PpsI	GAGTC	3 cut(s)	1139, 1240, 1315
Ppu21I	YACGTR	1 cut(s)	717
PsiI	TTATAA	1 cut(s)	281
Psp1406I	AACGTT	1 cut(s)	811
Psp6I	CCWGG	5 cut(s)	415, 513, 552, 623, 851
PspFI	CCCAGC	2 cut(s)	320, 1158
PspGI	CCWGG	5 cut(s)	415, 513, 552, 623, 851
PspN4I	GGNNCC	5 cut(s)	113, 168, 850, 1003, 1157
PspOMI	GGGCCC	1 cut(s)	1155
PspPI	GGNCC	4 cut(s)	848, 1155, 1156, 1233
PstNI	CAGNNNCTG	1 cut(s)	508
PsuI	RGATCY	1 cut(s)	823
PvuII	CAGCTG	3 cut(s)	133, 178, 185
RsaI	GTAC	2 cut(s)	715, 719
RsaNI	GTAC	2 cut(s)	714, 718
SaqAI	TTAA	2 cut(s)	396, 612
SatI	GCNGC	8 cut(s)	26, 60, 173, 176, 179, 543, 884, 969
Sau3AI	GATC	5 cut(s)	54, 823, 856, 1026, 1180
Sau96I	GGNCC	4 cut(s)	848, 1155, 1156, 1233
SchI	GAGTC	3 cut(s)	1140, 1240, 1316
ScrFI	CCNGG	7 cut(s)	85, 417, 515, 554, 625, 853, 1260
SduI	GDGCHC	2 cut(s)	268, 1159
SfaNI	GCATC	1 cut(s)	261
Sfr274I	CTCGAG	1 cut(s)	465
SfuI	TTCGAA	1 cut(s)	1010
SinI	GGWCC	1 cut(s)	848
SlaI	CTCGAG	1 cut(s)	465
SmlI	CTYRAG	1 cut(s)	465
SmoI	CTYRAG	1 cut(s)	465
SnaBI	TACGTA	1 cut(s)	717
Sse9I	AATT	6 cut(s)	199, 404, 586, 661, 725, 1165
SspMI	CTAG	3 cut(s)	116, 195, 888
StyD4I	CCNGG	7 cut(s)	83, 415, 513, 552, 623, 851, 1258
StyI	CCWWGG	2 cut(s)	887, 1098
TaaI	ACNGT	1 cut(s)	510
TaiI	ACGT	4 cut(s)	291, 719, 814, 961
TaqI	TCGA	4 cut(s)	466, 616, 1010, 1240
TaqII	GACCGA	1 cut(s)	86
TasI	AATT	6 cut(s)	199, 404, 586, 661, 725, 1165
TauI	GCSGC	3 cut(s)	62, 175, 886
TfiI	GAWTC	4 cut(s)	368, 428, 731, 1292
Tru1I	TTAA	2 cut(s)	396, 612
Tru9I	TTAA	2 cut(s)	396, 612
TscAI	CASTG	1 cut(s)	772
TseFI	GTSAC	1 cut(s)	1336
TseI	GCWGC	5 cut(s)	25, 175, 178, 542, 968
Tsp45I	GTSAC	1 cut(s)	1336
TspGWI	ACGGA	3 cut(s)	538, 1124, 1189
TspRI	CASTG	1 cut(s)	772
VpaK11BI	GGWCC	1 cut(s)	848
XhoI	CTCGAG	1 cut(s)	465
XmaJI	CCTAGG	1 cut(s)	887
XmnI	GAANNNNTTC	2 cut(s)	126, 1006
XspI	CTAG	3 cut(s)	116, 195, 888
ZraI	GACGTC	1 cut(s)	289

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.