Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0006223

Physical Location & Seq

Genomic Coordinates Forward (+)

65141023 .. 65154626

Gene Structure 13604 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00386190.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1695 bp

ATGAACCAGGCCACGACGTGGAGCAGTTCGAAGCGGCTGGACTCGTCGACAAAGGGTTCGAAGTCGAGCTCAATGGGTTTCCATGGTTTCCGGCGAGCTCGCCGCACACCGCTGAGTTTCCGATCACCTTTACCTTCGCCGCTTGATCGAGGCCGTCCGGGATGTCCAGAGGGTGCGTCTAGCACCTACAGCGTAGTGATCGCCGCCTTCTCAACGCCGGAGGAGGGCGTCCGCTCTTTTTCTGGGTTGCGGACGTCGGCTCCATATCTGTCATGCAATCTAGGGTTTTGCATAAACTTTTCGCGCATTGGTGCGGCAGCTGTGGAGAGCTTAGATACATTACTAATCAAAGATCCATGGATCATCGACAGCATTTCACCCATGAGCAAGCCGGAGATGGAGTCGGGGTCAGCCGAGGAGCAGCAGAGCATGGTGGCTCTGTTTATGGAGATCGCCGCCGGCCAGACCGACGAGACCGCCCGGCGGTTTTTGCAGGCTACGGGTTGGAACCTAGAGGAAGCACTTCAGCTGTTTTATGTGGGTAATGAAGCGGGGGCGATGGCTCCGCCGCAGCCGCCGGCTGAGAATGCTAGTAATTTGGCTGAACAGAGTTCTGGGGTGAATGAGAATGTGGCACAATATGGTGAGGATGAAGTGCGTGCCCCGATGCCGGTTATAAGGGACGTCCTGTATGATGATGTTGCACTCTATGGGGCTGGGTTGCTTTCATCTACATCACCAATGACAAGACTTCCAGTAAGCGAATCGGGTGTGATTGCATTCCGCAACTTTAATGAGGAATTGAAACATCCTGGAGTATGGGAATCAAATGAAGGTGCTACATCCGCGACAGATAGCTCTCGAGATAATCTCGCTTCCTTGTATCGTCCTCCCTTTCAGCTACTGTTCCAGGGTTCTTTTGAAAAGGCAAAGAGTGCTGCTTCCGTCCAGGACAAATGGCTCATGGTGAACTTGCAATCCAATTCGGAGTTCAGCTCCCATATGACATATGATGATACAACTGAAGGCAGGAAGGTTTGTACGTACTACAAATTGGAATCTATGCCTGTTGTTCTCATCATTGACCCCATCACTGGGCAGAAAATGCGGTCATGGAATGGAATGGTTCAACCGGAACGTTTGCTGGAGGATCTATTACCCTTCATGGATAGTGGTCCCAGGGATCATCATTTAGCTTTATCCAACAAGCGGCCTAGGGAAAGTTCTCTGCCTCAGCCACAGAATACAAATGATGGTTTGGTTGTTGCAGAACAAGCTAATGAAGAAGATGAGGAAGTGCAACGTGCATTAGCAGCTTCAATGGGGAGCATGAAGGAGACAAGTAGAACCGTTTCGAAAGATGAAGAAGAGATCATTACTGACAAGGAAGAAGAAACATCCTTACCTAAAGTGCCGACATATCCACCTTTGCCTGAAGAACCCAAGGGTGATAAGAGTCTCATTTGCAGAGTTGGAGTCCGTCTTCCAGATGGGCGCAGGGCCCAGCGCAATTTTCTACGGATTGATCCTATTCAGCTCTTGTGGTCATTCTGCTATTCGCAGTTGAAGGAAGAAAGGCCCATTCGACTGACTCATGCAGTCCCTGGAGCTACAAAGTGTCTGGATTATGATTGTGAATCTACATTTGAAGAGTCTGGTCTCCCCAACACTATGGTCTCAGTCACTTGGGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0019538 GO:0019941 GO:0030163 GO:0030674 GO:0032182 GO:0043130 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044464 GO:0051603 GO:0060090 GO:0071704 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Thioredoxin_7 UBA_4 UBX

Protein Analysis

564

Amino Acids

62.33

Weight (kDa)

4.92

Isoelectric Point (pI)

60.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UBA_8	PF22566	140 - 182	1.3e-06	UBA-like domain
UBA_4	PF14555	143 - 180	1.6e-11	UBA-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006223)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14570 AT1G14570 AT1G14570 AT1G14570
fragaria_vesca	FvH4_4g36080 FvH4_4g36080 FvH4_4g36080 FvH4_4g36080
malus_domestica	MD13G1012500.v1.1 MD16G1009200.v1.1
prunus_persica	Prupe.1G341400_v2.0.a1 Prupe.1G341400_v2.0.a1 Prupe.1G341400_v2.0.a1
pyrus_communis	pycom13g01000 pycom16g00890
rosa_chinensis	RchiOBHm_Chr4g0445701
rosa_laevigata	RLG00000005715
rosa_multiflora	Rmu_sc0000961.1_g000019 Rmu_sc0002957.1_g000001 Rmu_sc0003637.1_g000013
rosa_roxburghii	Rroxscaffold_5G00386190
rosa_rugosa	Rorug03G0328200 Rorug04G0365000
rosa_samantha	Rh4AG425900 Rh4CG452900 Rh4DG434100
rosa_wichuraiana	Rw4G036480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	677
AatII	GACGTC	2 cut(s)	257, 687
AccB7I	CCANNNNNTGG	1 cut(s)	18
AccBSI	CCGCTC	1 cut(s)	234
AccI	GTMKAC	1 cut(s)	47
AccII	CGCG	2 cut(s)	304, 848
AclI	AACGTT	1 cut(s)	1138
AclWI	GGATC	5 cut(s)	347, 368, 1158, 1191, 1520
AcoI	YGGCCR	1 cut(s)	460
AcuI	CTGAAG	3 cut(s)	509, 1044, 1455
AcyI	GRCGYC	3 cut(s)	228, 254, 684
AdeI	CACNNNGTG	1 cut(s)	18
AfaI	GTAC	2 cut(s)	1042, 1046
AfiI	CCNNNNNNNGG	7 cut(s)	18, 224, 483, 670, 1094, 1095, 1209
AgsI	TTSAA	6 cut(s)	805, 923, 1130, 1320, 1567, 1649
AjiI	CACGTC	1 cut(s)	18
AjnI	CCWGG	6 cut(s)	6, 811, 909, 948, 1178, 1603
AjuI	GAANNNNNNNTTGG	2 cut(s)	974, 1006
AloI	GAACNNNNNNTCC	2 cut(s)	962, 994
Alw21I	GWGCWC	2 cut(s)	71, 100
Alw26I	GTCTC	5 cut(s)	467, 1331, 1463, 1664, 1681
AlwI	GGATC	5 cut(s)	347, 368, 1158, 1191, 1520
AlwNI	CAGNNNCTG	2 cut(s)	904, 1604
Ama87I	CYCGRG	1 cut(s)	861
AoxI	GGCC	6 cut(s)	9, 151, 460, 1211, 1500, 1577
ApaI	GGGCCC	1 cut(s)	1504
ApeKI	GCWGC	5 cut(s)	317, 421, 571, 938, 1313
ArsI	GACNNNNNNTTYG	2 cut(s)	40, 72
Asp700I	GAANNNNTTC	2 cut(s)	522, 1351
AspA2I	CCTAGG	1 cut(s)	1214
AspLEI	GCGC	3 cut(s)	306, 1497, 1509
AspS9I	GGNCC	4 cut(s)	1175, 1500, 1501, 1578
AsuC2I	CCSGG	2 cut(s)	159, 481
AsuHPI	GGTGA	7 cut(s)	117, 369, 631, 656, 729, 979, 1460
AsuII	TTCGAA	3 cut(s)	29, 59, 1355
AvaI	CYCGRG	1 cut(s)	861
AvaII	GGWCC	1 cut(s)	1175
AvrII	CCTAGG	1 cut(s)	1214
BaeGI	GKGCMC	2 cut(s)	664, 1504
BanII	GRGCYC	3 cut(s)	71, 100, 1504
BbsI	GAAGAC	1 cut(s)	1475
Bbv12I	GWGCWC	2 cut(s)	71, 100
BbvCI	CCTCAGC	1 cut(s)	1233
BbvI	GCAGC	5 cut(s)	329, 433, 583, 925, 1325
BccI	CCATC	5 cut(s)	391, 553, 1097, 1247, 1484
BceAI	ACGGC	1 cut(s)	138
BciT130I	CCWGG	6 cut(s)	8, 813, 911, 950, 1180, 1605
BcnI	CCSGG	2 cut(s)	159, 481
BcoDI	GTCTC	5 cut(s)	467, 1331, 1463, 1664, 1681
BfaI	CTAG	5 cut(s)	180, 281, 512, 591, 1215
BfmI	CTRYAG	1 cut(s)	187
BlnI	CCTAGG	1 cut(s)	1214
Bme1390I	CCNGG	8 cut(s)	8, 159, 481, 813, 911, 950, 1180, 1605
Bme18I	GGWCC	1 cut(s)	1175
BmeT110I	CYCGRG	1 cut(s)	861
BmgBI	CACGTC	1 cut(s)	18
BmgT120I	GGNCC	4 cut(s)	1175, 1500, 1501, 1578
BmiI	GGNNCC	5 cut(s)	261, 509, 564, 1177, 1502
BmrFI	CCNGG	8 cut(s)	8, 159, 481, 813, 911, 950, 1180, 1605
BmrI	ACTGGG	1 cut(s)	1104
BmsI	GCATC	1 cut(s)	657
BmuI	ACTGGG	1 cut(s)	1104
BpiI	GAAGAC	1 cut(s)	1475
BplI	GAGNNNNNCTC	4 cut(s)	855, 887, 980, 1012
BpmI	CTGGAG	3 cut(s)	834, 1166, 1626
Bpu10I	CCTNAGC	1 cut(s)	1233
Bpu14I	TTCGAA	3 cut(s)	29, 59, 1355
BpuMI	CCSGG	2 cut(s)	159, 481
BsaAI	YACGTR	1 cut(s)	1044
BsaHI	GRCGYC	3 cut(s)	228, 254, 684
BsaI	GGTCTC	3 cut(s)	467, 1664, 1681
BsaJI	CCNNGG	9 cut(s)	82, 356, 414, 910, 1178, 1179, 1214, 1443, 1603
BsaWI	WCCGGW	1 cut(s)	1132
BsaXI	ACNNNNNCTCC	6 cut(s)	244, 274, 386, 392, 416, 422
Bsc4I	CCNNNNNNNGG	7 cut(s)	18, 224, 483, 670, 1094, 1095, 1209
Bse118I	RCCGGY	3 cut(s)	458, 577, 670
Bse1I	ACTGG	2 cut(s)	755, 1099
BseBI	CCWGG	6 cut(s)	8, 813, 911, 950, 1180, 1605
BseDI	CCNNGG	9 cut(s)	82, 356, 414, 910, 1178, 1179, 1214, 1443, 1603
BseGI	GGATG	5 cut(s)	167, 655, 808, 842, 1397
BseLI	CCNNNNNNNGG	7 cut(s)	18, 224, 483, 670, 1094, 1095, 1209
BseMII	CTCAG	4 cut(s)	104, 573, 1247, 1692
BseNI	ACTGG	2 cut(s)	755, 1099
BseRI	GAGGAG	2 cut(s)	236, 431
BseSI	GKGCMC	2 cut(s)	664, 1504
BseXI	GCAGC	5 cut(s)	329, 433, 583, 925, 1325
BseYI	CCCAGC	2 cut(s)	716, 1503
Bsh1236I	CGCG	2 cut(s)	304, 848
BshFI	GGCC	6 cut(s)	11, 153, 462, 1213, 1502, 1579
BsiHKAI	GWGCWC	2 cut(s)	71, 100
BsiHKCI	CYCGRG	1 cut(s)	861
BsiSI	CCGG	9 cut(s)	91, 158, 218, 392, 459, 481, 578, 671, 1133
BslFI	GGGAC	3 cut(s)	695, 1161, 1586
BslI	CCNNNNNNNGG	7 cut(s)	18, 224, 483, 670, 1094, 1095, 1209
BsmAI	GTCTC	5 cut(s)	467, 1331, 1463, 1664, 1681
BsmFI	GGGAC	3 cut(s)	695, 1161, 1586
BsmI	GAATGC	2 cut(s)	592, 779
BsnI	GGCC	6 cut(s)	11, 153, 462, 1213, 1502, 1579
Bso31I	GGTCTC	3 cut(s)	467, 1664, 1681
BsoBI	CYCGRG	1 cut(s)	861
Bsp119I	TTCGAA	3 cut(s)	29, 59, 1355
Bsp120I	GGGCCC	1 cut(s)	1500
Bsp1286I	GDGCHC	4 cut(s)	71, 100, 664, 1504
Bsp19I	CCATGG	2 cut(s)	82, 356
BspANI	GGCC	6 cut(s)	11, 153, 462, 1213, 1502, 1579
BspCNI	CTCAG	4 cut(s)	105, 574, 1246, 1691
BspFNI	CGCG	2 cut(s)	304, 848
BspLI	GGNNCC	5 cut(s)	261, 509, 564, 1177, 1502
BspPI	GGATC	5 cut(s)	347, 368, 1158, 1191, 1520
BspT104I	TTCGAA	3 cut(s)	29, 59, 1355
BspTNI	GGTCTC	3 cut(s)	467, 1664, 1681
BsrBI	CCGCTC	1 cut(s)	234
BsrFI	RCCGGY	3 cut(s)	458, 577, 670
BsrI	ACTGG	2 cut(s)	755, 1099
BssAI	RCCGGY	3 cut(s)	458, 577, 670
BssECI	CCNNGG	9 cut(s)	82, 356, 414, 910, 1178, 1179, 1214, 1443, 1603
BssNI	GRCGYC	3 cut(s)	228, 254, 684
BssT1I	CCWWGG	4 cut(s)	82, 356, 1214, 1443
Bst2UI	CCWGG	6 cut(s)	8, 813, 911, 950, 1180, 1605
Bst4CI	ACNGT	2 cut(s)	906, 1351
Bst6I	CTCTTC	2 cut(s)	1362, 1644
BstACI	GRCGYC	3 cut(s)	228, 254, 684
BstAPI	GCANNNNNTGC	2 cut(s)	935, 1105
BstBAI	YACGTR	1 cut(s)	1044
BstBI	TTCGAA	3 cut(s)	29, 59, 1355
BstC8I	GCNNGC	7 cut(s)	96, 100, 389, 460, 495, 579, 660
BstDEI	CTNAG	5 cut(s)	113, 331, 582, 1233, 1678
BstDSI	CCRYGG	2 cut(s)	82, 356
BstF5I	GGATG	5 cut(s)	167, 655, 808, 842, 1397
BstFNI	CGCG	2 cut(s)	304, 848
BstHHI	GCGC	3 cut(s)	306, 1497, 1509
BstMAI	GTCTC	5 cut(s)	467, 1331, 1463, 1664, 1681
BstMWI	GCNNNNNNNGC	9 cut(s)	189, 490, 574, 587, 845, 935, 1105, 1274, 1313
BstNI	CCWGG	6 cut(s)	8, 813, 911, 950, 1180, 1605
BstSCI	CCNGG	8 cut(s)	6, 157, 479, 811, 909, 948, 1178, 1603
BstSFI	CTRYAG	1 cut(s)	187
BstSLI	GKGCMC	2 cut(s)	664, 1504
BstSNI	TACGTA	1 cut(s)	1044
BstUI	CGCG	2 cut(s)	304, 848
BstV1I	GCAGC	5 cut(s)	329, 433, 583, 925, 1325
BstV2I	GAAGAC	1 cut(s)	1475
BstX2I	RGATCY	2 cut(s)	352, 1150
BstXI	CCANNNNNNTGG	1 cut(s)	1672
BstYI	RGATCY	2 cut(s)	352, 1150
BsuRI	GGCC	6 cut(s)	11, 153, 462, 1213, 1502, 1579
BtgI	CCRYGG	2 cut(s)	82, 356
BtgZI	GCGATG	1 cut(s)	572
BtrI	CACGTC	1 cut(s)	18
BtsCI	GGATG	5 cut(s)	167, 655, 808, 842, 1397
BtsIMutI	CAGTG	1 cut(s)	1092
Cac8I	GCNNGC	7 cut(s)	96, 100, 389, 460, 495, 579, 660
CaiI	CAGNNNCTG	2 cut(s)	904, 1604
CfoI	GCGC	3 cut(s)	306, 1497, 1509
Cfr10I	RCCGGY	3 cut(s)	458, 577, 670
Cfr13I	GGNCC	4 cut(s)	1175, 1500, 1501, 1578
CseI	GACGC	2 cut(s)	165, 217
Csp6I	GTAC	2 cut(s)	1041, 1045
CviQI	GTAC	2 cut(s)	1041, 1045
DdeI	CTNAG	5 cut(s)	113, 331, 582, 1233, 1678
DraIII	CACNNNGTG	1 cut(s)	18
EaeI	YGGCCR	1 cut(s)	460
Eam1104I	CTCTTC	2 cut(s)	1362, 1644
EarI	CTCTTC	2 cut(s)	1362, 1644
EciI	GGCGGA	1 cut(s)	555
Ecl136II	GAGCTC	2 cut(s)	69, 98
Eco105I	TACGTA	1 cut(s)	1044
Eco130I	CCWWGG	4 cut(s)	82, 356, 1214, 1443
Eco24I	GRGCYC	3 cut(s)	71, 100, 1504
Eco31I	GGTCTC	3 cut(s)	467, 1664, 1681
Eco47I	GGWCC	1 cut(s)	1175
Eco53kI	GAGCTC	2 cut(s)	69, 98
Eco57I	CTGAAG	3 cut(s)	509, 1044, 1455
Eco88I	CYCGRG	1 cut(s)	861
EcoICRI	GAGCTC	2 cut(s)	69, 98
EcoO109I	RGGNCCY	1 cut(s)	1500
EcoRII	CCWGG	6 cut(s)	6, 811, 909, 948, 1178, 1603
EcoT14I	CCWWGG	4 cut(s)	82, 356, 1214, 1443
EcoT38I	GRGCYC	3 cut(s)	71, 100, 1504
ErhI	CCWWGG	4 cut(s)	82, 356, 1214, 1443
FaqI	GGGAC	3 cut(s)	695, 1161, 1586
FauI	CCCGC	1 cut(s)	544
FauNDI	CATATG	2 cut(s)	1002, 1009
FblI	GTMKAC	1 cut(s)	47
FokI	GGATG	5 cut(s)	174, 662, 795, 829, 1384
FriOI	GRGCYC	3 cut(s)	71, 100, 1504
FspBI	CTAG	5 cut(s)	180, 281, 512, 591, 1215
GlaI	GCGC	3 cut(s)	305, 1496, 1508
GsaI	CCCAGC	2 cut(s)	720, 1507
GsuI	CTGGAG	3 cut(s)	834, 1166, 1626
HaeIII	GGCC	6 cut(s)	11, 153, 462, 1213, 1502, 1579
HapII	CCGG	9 cut(s)	91, 158, 218, 392, 459, 481, 578, 671, 1133
HgaI	GACGC	2 cut(s)	165, 217
HhaI	GCGC	3 cut(s)	306, 1497, 1509
Hin1I	GRCGYC	3 cut(s)	228, 254, 684
Hin6I	GCGC	3 cut(s)	304, 1495, 1507
HinP1I	GCGC	3 cut(s)	304, 1495, 1507
HincII	GTYRAC	1 cut(s)	48
HindII	GTYRAC	1 cut(s)	48
HpaII	CCGG	9 cut(s)	91, 158, 218, 392, 459, 481, 578, 671, 1133
HphI	GGTGA	7 cut(s)	117, 369, 631, 656, 729, 979, 1460
Hpy166II	GTNNAC	2 cut(s)	48, 970
Hpy188I	TCNGA	2 cut(s)	122, 988
Hpy188III	TCNNGA	5 cut(s)	167, 861, 863, 1487, 1622
Hpy8I	GTNNAC	2 cut(s)	48, 970
Hpy99I	CGWCG	4 cut(s)	19, 49, 259, 473
HpyAV	CCTTC	8 cut(s)	144, 217, 827, 1019, 1027, 1171, 1327, 1561
HpyCH4III	ACNGT	2 cut(s)	906, 1351
HpyCH4IV	ACGT	6 cut(s)	17, 254, 684, 1043, 1138, 1303
HpyF10VI	GCNNNNNNNGC	9 cut(s)	189, 490, 574, 587, 845, 935, 1105, 1274, 1313
HpyF3I	CTNAG	5 cut(s)	113, 331, 582, 1233, 1678
HpySE526I	ACGT	6 cut(s)	17, 254, 684, 1043, 1138, 1303
Hsp92I	GRCGYC	3 cut(s)	228, 254, 684
HspAI	GCGC	3 cut(s)	304, 1495, 1507
KroI	GCCGGC	2 cut(s)	458, 577
KroNI	GCCGGC	2 cut(s)	460, 579
LmnI	GCTCC	7 cut(s)	21, 265, 418, 568, 1001, 1326, 1607
Lsp1109I	GCAGC	5 cut(s)	329, 433, 583, 925, 1325
LweI	GCATC	1 cut(s)	657
MaeI	CTAG	5 cut(s)	180, 281, 512, 591, 1215
MaeII	ACGT	6 cut(s)	17, 254, 684, 1043, 1138, 1303
MaeIII	GTNAC	1 cut(s)	1681
MbiI	CCGCTC	1 cut(s)	234
MflI	RGATCY	2 cut(s)	352, 1150
MhlI	GDGCHC	4 cut(s)	71, 100, 664, 1504
MluCI	AATT	5 cut(s)	595, 800, 982, 1052, 1510
MlyI	GAGTC	6 cut(s)	35, 410, 1465, 1485, 1585, 1661
MmeI	TCCRAC	3 cut(s)	485, 1227, 1453
MroNI	GCCGGC	2 cut(s)	458, 577
MroXI	GAANNNNTTC	2 cut(s)	522, 1351
MseI	TTAA	1 cut(s)	792
MspA1I	CMGCKG	3 cut(s)	112, 320, 529
MspI	CCGG	9 cut(s)	91, 158, 218, 392, 459, 481, 578, 671, 1133
MspR9I	CCNGG	8 cut(s)	8, 159, 481, 813, 911, 950, 1180, 1605
Mva1269I	GAATGC	2 cut(s)	592, 779
MvaI	CCWGG	6 cut(s)	8, 813, 911, 950, 1180, 1605
MvnI	CGCG	2 cut(s)	304, 848
MwoI	GCNNNNNNNGC	9 cut(s)	189, 490, 574, 587, 845, 935, 1105, 1274, 1313
NaeI	GCCGGC	2 cut(s)	460, 579
NciI	CCSGG	2 cut(s)	159, 481
NcoI	CCATGG	2 cut(s)	82, 356
NdeI	CATATG	2 cut(s)	1002, 1009
NgoMIV	GCCGGC	2 cut(s)	458, 577
NlaIV	GGNNCC	5 cut(s)	261, 509, 564, 1177, 1502
NmeAIII	GCCGAG	1 cut(s)	439
NmuCI	GTSAC	1 cut(s)	1681
NspV	TTCGAA	3 cut(s)	29, 59, 1355
PaeR7I	CTCGAG	1 cut(s)	861
PasI	CCCWGGG	1 cut(s)	1179
PctI	GAATGC	2 cut(s)	592, 779
PdiI	GCCGGC	2 cut(s)	460, 579
PdmI	GAANNNNTTC	2 cut(s)	522, 1351
PfeI	GAWTC	4 cut(s)	764, 824, 1058, 1637
PflMI	CCANNNNNTGG	1 cut(s)	18
PfoI	TCCNGGA	3 cut(s)	157, 811, 948
PleI	GAGTC	6 cut(s)	35, 409, 1464, 1484, 1585, 1660
PpsI	GAGTC	6 cut(s)	35, 409, 1464, 1484, 1585, 1660
Ppu21I	YACGTR	1 cut(s)	1044
PsiI	TTATAA	1 cut(s)	677
Psp124BI	GAGCTC	2 cut(s)	71, 100
Psp1406I	AACGTT	1 cut(s)	1138
Psp6I	CCWGG	6 cut(s)	6, 811, 909, 948, 1178, 1603
PspFI	CCCAGC	2 cut(s)	716, 1503
PspGI	CCWGG	6 cut(s)	6, 811, 909, 948, 1178, 1603
PspN4I	GGNNCC	5 cut(s)	261, 509, 564, 1177, 1502
PspOMI	GGGCCC	1 cut(s)	1500
PspPI	GGNCC	4 cut(s)	1175, 1500, 1501, 1578
PstNI	CAGNNNCTG	2 cut(s)	904, 1604
PsuI	RGATCY	2 cut(s)	352, 1150
PvuII	CAGCTG	2 cut(s)	320, 529
RsaI	GTAC	2 cut(s)	1042, 1046
RsaNI	GTAC	2 cut(s)	1041, 1045
SacI	GAGCTC	2 cut(s)	71, 100
SalI	GTCGAC	1 cut(s)	46
SaqAI	TTAA	1 cut(s)	792
Sau96I	GGNCC	4 cut(s)	1175, 1500, 1501, 1578
SchI	GAGTC	6 cut(s)	35, 410, 1465, 1485, 1585, 1661
ScrFI	CCNGG	8 cut(s)	8, 159, 481, 813, 911, 950, 1180, 1605
SduI	GDGCHC	4 cut(s)	71, 100, 664, 1504
SfaNI	GCATC	1 cut(s)	657
SfcI	CTRYAG	1 cut(s)	187
Sfr274I	CTCGAG	1 cut(s)	861
SfuI	TTCGAA	3 cut(s)	29, 59, 1355
SinI	GGWCC	1 cut(s)	1175
SlaI	CTCGAG	1 cut(s)	861
SmlI	CTYRAG	1 cut(s)	861
SmoI	CTYRAG	1 cut(s)	861
SnaBI	TACGTA	1 cut(s)	1044
Sse9I	AATT	5 cut(s)	595, 800, 982, 1052, 1510
SspMI	CTAG	5 cut(s)	180, 281, 512, 591, 1215
SstI	GAGCTC	2 cut(s)	71, 100
StyD4I	CCNGG	8 cut(s)	6, 157, 479, 811, 909, 948, 1178, 1603
StyI	CCWWGG	4 cut(s)	82, 356, 1214, 1443
TaaI	ACNGT	2 cut(s)	906, 1351
TaiI	ACGT	6 cut(s)	20, 257, 687, 1046, 1141, 1306
TaqI	TCGA	9 cut(s)	29, 47, 59, 65, 148, 366, 862, 1355, 1585
TaqII	GACCGA	1 cut(s)	482
TasI	AATT	5 cut(s)	595, 800, 982, 1052, 1510
TauI	GCSGC	9 cut(s)	37, 105, 142, 206, 317, 458, 571, 577, 1213
TfiI	GAWTC	4 cut(s)	764, 824, 1058, 1637
Tru1I	TTAA	1 cut(s)	792
Tru9I	TTAA	1 cut(s)	792
TscAI	CASTG	1 cut(s)	1099
TseFI	GTSAC	1 cut(s)	1681
TseI	GCWGC	5 cut(s)	317, 421, 571, 938, 1313
Tsp45I	GTSAC	1 cut(s)	1681
TspDTI	ATGAA	9 cut(s)	17, 561, 666, 717, 846, 1153, 1296, 1346, 1377
TspGWI	ACGGA	3 cut(s)	934, 1469, 1534
TspRI	CASTG	1 cut(s)	1099
Van91I	CCANNNNNTGG	1 cut(s)	18
VpaK11BI	GGWCC	1 cut(s)	1175
XhoI	CTCGAG	1 cut(s)	861
XmaJI	CCTAGG	1 cut(s)	1214
XmiI	GTMKAC	1 cut(s)	47
XmnI	GAANNNNTTC	2 cut(s)	522, 1351
XspI	CTAG	5 cut(s)	180, 281, 512, 591, 1215
ZraI	GACGTC	2 cut(s)	255, 685

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.