DNA-damage-repair toleration protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr7g0217791 |
| rosa_laevigata | RLG00000003265 RLG00000008669 |
| rosa_multiflora | Rmu_sc0003536.1_g000004 |
| rosa_roxburghii | Rroxscaffold_7G00180330 |
| rosa_samantha | Rh4CG138300 Rh4DG125300 Rh4DG277500 Rh7AG324300 Rh7BG105600 Rh7BG315400 Rh7CG051300 Rh7CG330800 Rh7CG341200 |
| rosa_wichuraiana | Rw4G012310 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 40 |
| AccI | GTMKAC | 1 cut(s) | 66 |
| AciI | CCGC | 2 cut(s) | 51, 273 |
| AcoI | YGGCCR | 1 cut(s) | 125 |
| AcsI | RAATTY | 1 cut(s) | 196 |
| AcuI | CTGAAG | 1 cut(s) | 250 |
| AcvI | CACGTG | 1 cut(s) | 72 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 37, 134, 306 |
| AflIII | ACRYGT | 1 cut(s) | 69 |
| AgsI | TTSAA | 5 cut(s) | 91, 112, 154, 202, 253 |
| AluBI | AGCT | 2 cut(s) | 18, 261 |
| AluI | AGCT | 2 cut(s) | 18, 261 |
| Alw26I | GTCTC | 2 cut(s) | 39, 276 |
| AoxI | GGCC | 3 cut(s) | 125, 222, 274 |
| ApoI | RAATTY | 1 cut(s) | 196 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 260 |
| AsuHPI | GGTGA | 2 cut(s) | 196, 312 |
| BaeGI | GKGCMC | 1 cut(s) | 99 |
| BanI | GGYRCC | 1 cut(s) | 40 |
| BbrPI | CACGTG | 1 cut(s) | 72 |
| BccI | CCATC | 2 cut(s) | 62, 179 |
| BcoDI | GTCTC | 2 cut(s) | 39, 276 |
| BisI | GCNGC | 1 cut(s) | 274 |
| BlsI | GCNGC | 1 cut(s) | 275 |
| BmiI | GGNNCC | 1 cut(s) | 42 |
| BsaAI | YACGTR | 1 cut(s) | 72 |
| BsaJI | CCNNGG | 1 cut(s) | 122 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 37, 134, 306 |
| BseDI | CCNNGG | 1 cut(s) | 122 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 37, 134, 306 |
| BseSI | GKGCMC | 1 cut(s) | 99 |
| BshFI | GGCC | 3 cut(s) | 127, 224, 276 |
| BshNI | GGYRCC | 1 cut(s) | 40 |
| BsiSI | CCGG | 2 cut(s) | 38, 128 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 37, 134, 306 |
| BsmAI | GTCTC | 2 cut(s) | 39, 276 |
| BsnI | GGCC | 3 cut(s) | 127, 224, 276 |
| Bsp1286I | GDGCHC | 1 cut(s) | 99 |
| Bsp143I | GATC | 1 cut(s) | 60 |
| BspACI | CCGC | 2 cut(s) | 51, 273 |
| BspANI | GGCC | 3 cut(s) | 127, 224, 276 |
| BspLI | GGNNCC | 1 cut(s) | 42 |
| BspQI | GCTCTTC | 1 cut(s) | 251 |
| BspT107I | GGYRCC | 1 cut(s) | 40 |
| BssECI | CCNNGG | 1 cut(s) | 122 |
| BssMI | GATC | 1 cut(s) | 60 |
| BssT1I | CCWWGG | 1 cut(s) | 122 |
| Bst4CI | ACNGT | 2 cut(s) | 236, 324 |
| Bst6I | CTCTTC | 1 cut(s) | 251 |
| BstBAI | YACGTR | 1 cut(s) | 72 |
| BstC8I | GCNNGC | 1 cut(s) | 16 |
| BstDEI | CTNAG | 1 cut(s) | 278 |
| BstKTI | GATC | 1 cut(s) | 63 |
| BstMAI | GTCTC | 2 cut(s) | 39, 276 |
| BstMBI | GATC | 1 cut(s) | 60 |
| BstSLI | GKGCMC | 1 cut(s) | 99 |
| BsuRI | GGCC | 3 cut(s) | 127, 224, 276 |
| BtsIMutI | CAGTG | 1 cut(s) | 274 |
| Cac8I | GCNNGC | 1 cut(s) | 16 |
| CviJI | RGCY | 7 cut(s) | 18, 76, 127, 224, 261, 276, 299 |
| CviKI_1 | RGCY | 7 cut(s) | 18, 76, 127, 224, 261, 276, 299 |
| DdeI | CTNAG | 1 cut(s) | 278 |
| DpnI | GATC | 1 cut(s) | 62 |
| DpnII | GATC | 1 cut(s) | 60 |
| EaeI | YGGCCR | 1 cut(s) | 125 |
| Eam1104I | CTCTTC | 1 cut(s) | 251 |
| EarI | CTCTTC | 1 cut(s) | 251 |
| EciI | GGCGGA | 1 cut(s) | 40 |
| Eco130I | CCWWGG | 1 cut(s) | 122 |
| Eco57I | CTGAAG | 1 cut(s) | 250 |
| Eco72I | CACGTG | 1 cut(s) | 72 |
| EcoT14I | CCWWGG | 1 cut(s) | 122 |
| ErhI | CCWWGG | 1 cut(s) | 122 |
| FaiI | YATR | 1 cut(s) | 215 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 245, 277, 248, 280 |
| FblI | GTMKAC | 1 cut(s) | 66 |
| Fnu4HI | GCNGC | 1 cut(s) | 274 |
| Fsp4HI | GCNGC | 1 cut(s) | 274 |
| GluI | GCNGC | 1 cut(s) | 274 |
| HaeIII | GGCC | 3 cut(s) | 127, 224, 276 |
| HapII | CCGG | 2 cut(s) | 38, 128 |
| HincII | GTYRAC | 1 cut(s) | 67 |
| HindII | GTYRAC | 1 cut(s) | 67 |
| HinfI | GANTC | 4 cut(s) | 143, 190, 202, 317 |
| HpaII | CCGG | 2 cut(s) | 38, 128 |
| HphI | GGTGA | 2 cut(s) | 196, 312 |
| Hpy166II | GTNNAC | 1 cut(s) | 67 |
| Hpy188I | TCNGA | 3 cut(s) | 148, 195, 207 |
| Hpy188III | TCNNGA | 1 cut(s) | 58 |
| Hpy8I | GTNNAC | 1 cut(s) | 67 |
| Hpy99I | CGWCG | 3 cut(s) | 68, 236, 328 |
| HpyAV | CCTTC | 2 cut(s) | 97, 148 |
| HpyCH4III | ACNGT | 2 cut(s) | 236, 324 |
| HpyCH4IV | ACGT | 1 cut(s) | 71 |
| HpyF3I | CTNAG | 1 cut(s) | 278 |
| HpySE526I | ACGT | 1 cut(s) | 71 |
| Kzo9I | GATC | 1 cut(s) | 60 |
| LguI | GCTCTTC | 1 cut(s) | 251 |
| LmnI | GCTCC | 1 cut(s) | 23 |
| LpnPI | CCDG | 5 cut(s) | 28, 44, 51, 117, 141 |
| MaeII | ACGT | 1 cut(s) | 71 |
| MalI | GATC | 1 cut(s) | 62 |
| MboI | GATC | 1 cut(s) | 60 |
| MboII | GAAGA | 6 cut(s) | 199, 256, 265, 268, 302, 326 |
| MhlI | GDGCHC | 1 cut(s) | 99 |
| MluCI | AATT | 2 cut(s) | 132, 196 |
| MnlI | CCTC | 3 cut(s) | 38, 214, 237 |
| MroXI | GAANNNNTTC | 1 cut(s) | 260 |
| MspI | CCGG | 2 cut(s) | 38, 128 |
| NdeII | GATC | 1 cut(s) | 60 |
| NlaIV | GGNNCC | 1 cut(s) | 42 |
| PciSI | GCTCTTC | 1 cut(s) | 251 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 63 |
| PdmI | GAANNNNTTC | 1 cut(s) | 260 |
| PfeI | GAWTC | 4 cut(s) | 143, 190, 202, 317 |
| PkrI | GCNGC | 1 cut(s) | 275 |
| PmaCI | CACGTG | 1 cut(s) | 72 |
| PmlI | CACGTG | 1 cut(s) | 72 |
| Ppu21I | YACGTR | 1 cut(s) | 72 |
| PspCI | CACGTG | 1 cut(s) | 72 |
| PspN4I | GGNNCC | 1 cut(s) | 42 |
| SalI | GTCGAC | 1 cut(s) | 65 |
| SapI | GCTCTTC | 1 cut(s) | 251 |
| SatI | GCNGC | 1 cut(s) | 274 |
| Sau3AI | GATC | 1 cut(s) | 60 |
| SduI | GDGCHC | 1 cut(s) | 99 |
| SetI | ASST | 5 cut(s) | 20, 74, 124, 248, 263 |
| Sse9I | AATT | 2 cut(s) | 132, 196 |
| SsiI | CCGC | 2 cut(s) | 51, 273 |
| StyI | CCWWGG | 1 cut(s) | 122 |
| TaaI | ACNGT | 2 cut(s) | 236, 324 |
| TaiI | ACGT | 1 cut(s) | 74 |
| TaqI | TCGA | 3 cut(s) | 57, 66, 231 |
| TasI | AATT | 2 cut(s) | 132, 196 |
| TauI | GCSGC | 1 cut(s) | 276 |
| TfiI | GAWTC | 4 cut(s) | 143, 190, 202, 317 |
| TscAI | CASTG | 1 cut(s) | 274 |
| TspRI | CASTG | 1 cut(s) | 274 |
| XapI | RAATTY | 1 cut(s) | 196 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 178 |
| XmiI | GTMKAC | 1 cut(s) | 66 |
| XmnI | GAANNNNTTC | 1 cut(s) | 260 |