RLG00000010437

BAAT / Acyl-CoA thioester hydrolase C terminal

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0009765
Physical Location & Seq
Forward (+)
1637602 .. 1640135
2534 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000010437

Sequence Viewer

Length: 873 bp
ATGTCCGTAACTCGGCCGAGTCAACAAACCCAACCCGGGGTTCAAAAGCGGAGAGTTGTCATAGAAAACAGCCATGGGGAGAAGCTTGTGGGGATATTACATGATACTGGTTCAAAGGAGGTTGTAGTGTTCTGCCATGGCATACATTCCTCAAAGGAACGCATCCCAATGGTGAACCTTGCTGCTGCGTTGGAAATACAAGGAATAACTGCTTTCCGCTTTGACTTTGCTGGAAATGGGGAAAGTGAAGGTTCATTTCGATACGGTAACTATCGCAGAGAAGCTGATGATTTACGTGCAGTAGTTCAACACTTTCTTGGGTGCCATTATTTAATAACTGCAATTGTTGGGCACAGTAAAGGGGGAAATGCAGTGATCTTGTATGGTGCAAAGTACAGGGATGTTCCTATAGTTGTAAATATTTCTGGCCGGTTTAATCTGGAAAGAGGTATTGAAGGTCGCTTAGGTAAAGATTATCTACAAAGAATCAAGCAAGATGGATTTATTGATGTGAAGAACAAAAGAGGCACATTTCAGTATCGAGTAACTCAAGAGAGTTTGTTGGAGCGGCTAACGATTGATATGCGTGCAGTGTGCCAGTCAATTGATCCAAATTGCAGGGTTTTGACAGTTCATGGATCAATGGATAAGATGGTTCCTGTTGAAGATGCTTACGAGTTCAATAAGATCATACCTAATCATAAACTATACATAGTGGAAGGAGCTGATCATGAATTCACTTCATATCAAAATGAGTTGGCTTCAATTGTGTTGGGTTTCATTAAGAAAGATTTTCACCAGGACAAGTTTATGTTCAAGCAGTCACCACTTGGCACAAGAGCAGCAGATAGATCTGTTAATTCACGATTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03010 map03010
Pfam Domains
Protein Families
Hydrolase_4 Ribosomal_S10

Protein Analysis

291

Amino Acids

32.73

Weight (kDa)

9.07

Isoelectric Point (pI)

34.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hydrolase_4 PF12146 38 - 146 2.1e-12 Serine aminopeptidase, S33
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 321
AccBSI CCGCTC 1 cut(s) 568
AciI CCGC 3 cut(s) 49, 217, 568
AclWI GGATC 2 cut(s) 602, 646
AcoI YGGCCR 2 cut(s) 14, 427
AcsI RAATTY 1 cut(s) 734
AfaI GTAC 1 cut(s) 395
AfiI CCNNNNNNNGG 3 cut(s) 12, 36, 37
AgsI TTSAA 8 cut(s) 44, 114, 308, 455, 665, 682, 765, 817
AjnI CCWGG 1 cut(s) 798
AjuI GAANNNNNNNTTGG 2 cut(s) 24, 56
AluBI AGCT 3 cut(s) 85, 284, 725
AluI AGCT 3 cut(s) 85, 284, 725
AlwI GGATC 2 cut(s) 602, 646
Ama87I CYCGRG 1 cut(s) 35
AoxI GGCC 2 cut(s) 14, 427
ApeKI GCWGC 3 cut(s) 182, 185, 842
ApoI RAATTY 1 cut(s) 734
AsuC2I CCSGG 2 cut(s) 36, 37
AsuHPI GGTGA 3 cut(s) 184, 788, 816
AvaI CYCGRG 1 cut(s) 35
BaeGI GKGCMC 1 cut(s) 354
BanI GGYRCC 1 cut(s) 321
BbvI GCAGC 3 cut(s) 169, 172, 854
BccI CCATC 2 cut(s) 491, 646
BcgI CGANNNNNNTGC 2 cut(s) 565, 599
BciT130I CCWGG 1 cut(s) 800
BclI TGATCA 1 cut(s) 727
BcnI CCSGG 2 cut(s) 36, 37
BfmI CTRYAG 1 cut(s) 408
BglII AGATCT 1 cut(s) 851
BisI GCNGC 4 cut(s) 183, 186, 569, 843
BlsI GCNGC 4 cut(s) 184, 187, 570, 844
Bme1390I CCNGG 3 cut(s) 36, 37, 800
BmeT110I CYCGRG 1 cut(s) 35
BmiI GGNNCC 2 cut(s) 323, 657
BmrFI CCNGG 3 cut(s) 36, 37, 800
BmsI GCATC 2 cut(s) 171, 658
Bpu10I CCTNAGC 1 cut(s) 463
BpuEI CTTGAG 1 cut(s) 534
BpuMI CCSGG 2 cut(s) 36, 37
BsaAI YACGTR 1 cut(s) 296
BsaJI CCNNGG 4 cut(s) 35, 36, 73, 136
Bsc4I CCNNNNNNNGG 3 cut(s) 12, 36, 37
Bse118I RCCGGY 1 cut(s) 429
Bse1I ACTGG 2 cut(s) 112, 598
BseBI CCWGG 1 cut(s) 800
BseDI CCNNGG 4 cut(s) 35, 36, 73, 136
BseGI GGATG 2 cut(s) 162, 406
BseLI CCNNNNNNNGG 3 cut(s) 12, 36, 37
BseNI ACTGG 2 cut(s) 112, 598
BseSI GKGCMC 1 cut(s) 354
BseX3I CGGCCG 1 cut(s) 14
BseXI GCAGC 3 cut(s) 169, 172, 854
BsgI GTGCAG 2 cut(s) 318, 609
Bsh1285I CGRYCG 1 cut(s) 17
BshFI GGCC 2 cut(s) 16, 429
BshNI GGYRCC 1 cut(s) 321
BsiEI CGRYCG 1 cut(s) 17
BsiHKCI CYCGRG 1 cut(s) 35
BsiSI CCGG 2 cut(s) 36, 430
BslI CCNNNNNNNGG 3 cut(s) 12, 36, 37
BsnI GGCC 2 cut(s) 16, 429
BsoBI CYCGRG 1 cut(s) 35
Bsp1286I GDGCHC 1 cut(s) 354
Bsp143I GATC 6 cut(s) 375, 607, 638, 687, 727, 851
Bsp19I CCATGG 2 cut(s) 73, 136
BspACI CCGC 3 cut(s) 49, 217, 568
BspANI GGCC 2 cut(s) 16, 429
BspHI TCATGA 1 cut(s) 730
BspLI GGNNCC 2 cut(s) 323, 657
BspPI GGATC 2 cut(s) 602, 646
BspT107I GGYRCC 1 cut(s) 321
BsrBI CCGCTC 1 cut(s) 568
BsrFI RCCGGY 1 cut(s) 429
BsrI ACTGG 2 cut(s) 112, 598
BssAI RCCGGY 1 cut(s) 429
BssECI CCNNGG 4 cut(s) 35, 36, 73, 136
BssMI GATC 6 cut(s) 375, 607, 638, 687, 727, 851
BssT1I CCWWGG 2 cut(s) 73, 136
Bst2UI CCWGG 1 cut(s) 800
Bst4CI ACNGT 3 cut(s) 266, 356, 631
BstBAI YACGTR 1 cut(s) 296
BstC8I GCNNGC 1 cut(s) 588
BstDEI CTNAG 1 cut(s) 463
BstDSI CCRYGG 2 cut(s) 73, 136
BstF5I GGATG 2 cut(s) 162, 406
BstKTI GATC 6 cut(s) 378, 610, 641, 690, 730, 854
BstMBI GATC 6 cut(s) 375, 607, 638, 687, 727, 851
BstMCI CGRYCG 1 cut(s) 17
BstNI CCWGG 1 cut(s) 800
BstSCI CCNGG 3 cut(s) 34, 35, 798
BstSFI CTRYAG 1 cut(s) 408
BstSLI GKGCMC 1 cut(s) 354
BstV1I GCAGC 3 cut(s) 169, 172, 854
BstX2I RGATCY 1 cut(s) 851
BstYI RGATCY 1 cut(s) 851
BstZI CGGCCG 1 cut(s) 14
BsuRI GGCC 2 cut(s) 16, 429
BtgI CCRYGG 2 cut(s) 73, 136
BtsCI GGATG 2 cut(s) 162, 406
BtsI GCAGTG 2 cut(s) 378, 597
BtsIMutI CAGTG 2 cut(s) 378, 597
Cac8I GCNNGC 1 cut(s) 588
CciI TCATGA 1 cut(s) 730
Cfr10I RCCGGY 1 cut(s) 429
Cfr9I CCCGGG 1 cut(s) 35
Csp6I GTAC 1 cut(s) 394
CviAII CATG 5 cut(s) 74, 101, 137, 635, 731
CviJI RGCY 8 cut(s) 16, 72, 85, 284, 429, 571, 725, 761
CviKI_1 RGCY 8 cut(s) 16, 72, 85, 284, 429, 571, 725, 761
CviQI GTAC 1 cut(s) 394
DdeI CTNAG 1 cut(s) 463
DpnI GATC 6 cut(s) 377, 609, 640, 689, 729, 853
DpnII GATC 6 cut(s) 375, 607, 638, 687, 727, 851
EaeI YGGCCR 2 cut(s) 14, 427
EagI CGGCCG 1 cut(s) 14
EclXI CGGCCG 1 cut(s) 14
Eco130I CCWWGG 2 cut(s) 73, 136
Eco52I CGGCCG 1 cut(s) 14
Eco88I CYCGRG 1 cut(s) 35
EcoRI GAATTC 1 cut(s) 734
EcoRII CCWGG 1 cut(s) 798
EcoT14I CCWWGG 2 cut(s) 73, 136
ErhI CCWWGG 2 cut(s) 73, 136
FaeI CATG 5 cut(s) 77, 104, 140, 638, 734
FatI CATG 5 cut(s) 73, 100, 136, 634, 730
FbaI TGATCA 1 cut(s) 727
Fnu4HI GCNGC 4 cut(s) 183, 186, 569, 843
FokI GGATG 2 cut(s) 149, 413
Fsp4HI GCNGC 4 cut(s) 183, 186, 569, 843
GluI GCNGC 4 cut(s) 183, 186, 569, 843
HaeIII GGCC 2 cut(s) 16, 429
HapII CCGG 2 cut(s) 36, 430
Hin1II CATG 5 cut(s) 77, 104, 140, 638, 734
HincII GTYRAC 1 cut(s) 23
HindII GTYRAC 1 cut(s) 23
HindIII AAGCTT 1 cut(s) 83
HinfI GANTC 2 cut(s) 19, 486
HpaII CCGG 2 cut(s) 36, 430
HphI GGTGA 3 cut(s) 184, 788, 816
Hpy166II GTNNAC 2 cut(s) 23, 175
Hpy188III TCNNGA 4 cut(s) 440, 551, 731, 864
Hpy8I GTNNAC 2 cut(s) 23, 175
HpyAV CCTTC 3 cut(s) 242, 449, 713
HpyCH4III ACNGT 3 cut(s) 266, 356, 631
HpyCH4IV ACGT 1 cut(s) 295
HpyCH4V TGCA 6 cut(s) 299, 341, 371, 389, 590, 618
HpyF3I CTNAG 1 cut(s) 463
HpySE526I ACGT 1 cut(s) 295
Hsp92II CATG 5 cut(s) 77, 104, 140, 638, 734
Ksp22I TGATCA 1 cut(s) 727
Kzo9I GATC 6 cut(s) 375, 607, 638, 687, 727, 851
LmnI GCTCC 2 cut(s) 565, 722
Lsp1109I GCAGC 3 cut(s) 169, 172, 854
LweI GCATC 2 cut(s) 171, 658
MaeII ACGT 1 cut(s) 295
MaeIII GTNAC 4 cut(s) 7, 266, 544, 822
MalI GATC 6 cut(s) 377, 609, 640, 689, 729, 853
MbiI CCGCTC 1 cut(s) 568
MboI GATC 6 cut(s) 375, 607, 638, 687, 727, 851
MboII GAAGA 2 cut(s) 526, 677
MfeI CAATTG 3 cut(s) 342, 603, 765
MflI RGATCY 1 cut(s) 851
MhlI GDGCHC 1 cut(s) 354
MluCI AATT 6 cut(s) 342, 603, 613, 734, 765, 859
MlyI GAGTC 1 cut(s) 28
MmeI TCCRAC 2 cut(s) 171, 543
MnlI CCTC 4 cut(s) 112, 160, 440, 518
MseI TTAA 4 cut(s) 332, 435, 783, 858
MslI CAYNNNNRTG 1 cut(s) 167
MspI CCGG 2 cut(s) 36, 430
MspR9I CCNGG 3 cut(s) 36, 37, 800
MunI CAATTG 3 cut(s) 342, 603, 765
MvaI CCWGG 1 cut(s) 800
NciI CCSGG 2 cut(s) 36, 37
NcoI CCATGG 2 cut(s) 73, 136
NdeII GATC 6 cut(s) 375, 607, 638, 687, 727, 851
NlaIII CATG 5 cut(s) 77, 104, 140, 638, 734
NlaIV GGNNCC 2 cut(s) 323, 657
NmeAIII GCCGAG 1 cut(s) 42
NmuCI GTSAC 1 cut(s) 822
PagI TCATGA 1 cut(s) 730
PfeI GAWTC 1 cut(s) 486
PkrI GCNGC 4 cut(s) 184, 187, 570, 844
PleI GAGTC 1 cut(s) 27
PpsI GAGTC 1 cut(s) 27
Ppu21I YACGTR 1 cut(s) 296
Psp6I CCWGG 1 cut(s) 798
PspGI CCWGG 1 cut(s) 798
PspN4I GGNNCC 2 cut(s) 323, 657
PsuI RGATCY 1 cut(s) 851
RsaI GTAC 1 cut(s) 395
RsaNI GTAC 1 cut(s) 394
RseI CAYNNNNRTG 1 cut(s) 167
SaqAI TTAA 4 cut(s) 332, 435, 783, 858
SatI GCNGC 4 cut(s) 183, 186, 569, 843
Sau3AI GATC 6 cut(s) 375, 607, 638, 687, 727, 851
SchI GAGTC 1 cut(s) 28
ScrFI CCNGG 3 cut(s) 36, 37, 800
SduI GDGCHC 1 cut(s) 354
SfaNI GCATC 2 cut(s) 171, 658
SfcI CTRYAG 1 cut(s) 408
SmaI CCCGGG 1 cut(s) 37
SmiMI CAYNNNNRTG 1 cut(s) 167
SmlI CTYRAG 1 cut(s) 549
SmoI CTYRAG 1 cut(s) 549
Sse9I AATT 6 cut(s) 342, 603, 613, 734, 765, 859
SsiI CCGC 3 cut(s) 49, 217, 568
SspI AATATT 1 cut(s) 421
StyD4I CCNGG 3 cut(s) 34, 35, 798
StyI CCWWGG 2 cut(s) 73, 136
TaaI ACNGT 3 cut(s) 266, 356, 631
TaiI ACGT 1 cut(s) 298
TaqI TCGA 2 cut(s) 259, 541
TasI AATT 6 cut(s) 342, 603, 613, 734, 765, 859
TatI WGTACW 1 cut(s) 393
TauI GCSGC 1 cut(s) 571
TfiI GAWTC 1 cut(s) 486
Tru1I TTAA 4 cut(s) 332, 435, 783, 858
Tru9I TTAA 4 cut(s) 332, 435, 783, 858
TscAI CASTG 2 cut(s) 378, 597
TseFI GTSAC 1 cut(s) 822
TseI GCWGC 3 cut(s) 182, 185, 842
Tsp45I GTSAC 1 cut(s) 822
TspDTI ATGAA 5 cut(s) 243, 623, 732, 747, 769
TspMI CCCGGG 1 cut(s) 35
TspRI CASTG 2 cut(s) 378, 597
XapI RAATTY 1 cut(s) 734
XmaI CCCGGG 1 cut(s) 35
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.