Rh6CG515600

BAAT / Acyl-CoA thioester hydrolase C terminal

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0009765
Physical Location & Seq
Reverse (-)
67315856 .. 67318300
2445 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG515600.1

Sequence Viewer

Length: 879 bp
ATGTCCGTAACTCGGCCGAGTCAACAACAACAACAACCCGGGGTTCAAAAGCGGAGAGTCGTCATACAAAACAGCCATGGGGAGAAGCTTGTGGGGATATTACATGATACGGGTGGTTCAAAGGAGCTCGTTGTGTTCTGCCATGGCATACATTCCTCAAAGGAACGCATCCCAATGGTGAACCTTGCTGCTGCGTTGGAAATACAAGGAATTAGTGCTTTCCGCTTTGACTTTGCTGGAAATGGGGAAAGTGAAGGTTCATTTCGATTCGGTAACTATCGCAGAGAAGCTGATGATTTACGTGCAGTAGTTCAACACTTTCTTGGGTGCCATTATGTAATAACTGCAATTGTTGGGCACAGTAAAGGGGGAAATGCAGTGATCTTGTATGGTGCAAAGTACAGGGATGTTCCTATAGTTGTAAATATTTCTGGCCGGTTTAATCTGGAAAGAGGTATTGAAGGTCGCTTAGGTAAAGATTATCTACAAAGAATCAAGCAAGATGGATTTATTGATGTGAAGAACAAAAGAGGCACATTTCAGTATCGAGTAACTCAAGAGAGTTTGTTGGAGCGGCTAACGATTGATATGCGTGCAGTGTGCCAGTCAATTGATCAAAATTGCAGGGTTTTGACAGTTCATGGATCAATGGATAAGATGGTTCCTGTTGAAGATGCTTACGAGTTCAATAAGATCATACCTAATCATAAACTATACATAGTGGAAGGAGCTGATCATGAATTCACTTCATATCAAAATGAGTTGGCTTCAATTGTGTTGGGTTTCATTAAGAAAGATTTTCACCAGGACAAGTTTATGTTCAAGCAGTCACCACTTGGCACAAGAGCAGCAGATAGATCTGTTAATTCACGATTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03010 map03010
Pfam Domains
Protein Families
Hydrolase_4 Ribosomal_S10

Protein Analysis

292

Amino Acids

32.94

Weight (kDa)

9.2

Isoelectric Point (pI)

36.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hydrolase_4 PF12146 40 - 143 3.3e-12 Serine aminopeptidase, S33
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 327
AccBSI CCGCTC 1 cut(s) 574
AciI CCGC 3 cut(s) 52, 223, 574
AclWI GGATC 1 cut(s) 652
AcoI YGGCCR 2 cut(s) 14, 433
AcsI RAATTY 1 cut(s) 740
AfaI GTAC 1 cut(s) 401
AfiI CCNNNNNNNGG 1 cut(s) 12
AgsI TTSAA 8 cut(s) 47, 120, 314, 461, 671, 688, 771, 823
AjnI CCWGG 1 cut(s) 804
AluBI AGCT 4 cut(s) 88, 127, 290, 731
AluI AGCT 4 cut(s) 88, 127, 290, 731
Alw21I GWGCWC 1 cut(s) 129
AlwI GGATC 1 cut(s) 652
Ama87I CYCGRG 1 cut(s) 38
AoxI GGCC 2 cut(s) 14, 433
ApeKI GCWGC 3 cut(s) 188, 191, 848
ApoI RAATTY 1 cut(s) 740
AsuC2I CCSGG 2 cut(s) 39, 40
AsuHPI GGTGA 3 cut(s) 190, 794, 822
AvaI CYCGRG 1 cut(s) 38
BaeGI GKGCMC 1 cut(s) 360
BanI GGYRCC 1 cut(s) 327
BanII GRGCYC 1 cut(s) 129
Bbv12I GWGCWC 1 cut(s) 129
BbvI GCAGC 3 cut(s) 175, 178, 860
BccI CCATC 2 cut(s) 497, 652
BcgI CGANNNNNNTGC 2 cut(s) 571, 605
BciT130I CCWGG 1 cut(s) 806
BclI TGATCA 2 cut(s) 613, 733
BcnI CCSGG 2 cut(s) 39, 40
BfmI CTRYAG 1 cut(s) 414
BglII AGATCT 1 cut(s) 857
BisI GCNGC 4 cut(s) 189, 192, 575, 849
BlsI GCNGC 4 cut(s) 190, 193, 576, 850
Bme1390I CCNGG 3 cut(s) 39, 40, 806
BmeT110I CYCGRG 1 cut(s) 38
BmiI GGNNCC 2 cut(s) 329, 663
BmrFI CCNGG 3 cut(s) 39, 40, 806
BmsI GCATC 2 cut(s) 177, 664
Bpu10I CCTNAGC 1 cut(s) 469
BpuEI CTTGAG 1 cut(s) 540
BpuMI CCSGG 2 cut(s) 39, 40
BsaAI YACGTR 1 cut(s) 302
BsaJI CCNNGG 4 cut(s) 38, 39, 76, 142
Bsc4I CCNNNNNNNGG 1 cut(s) 12
Bse118I RCCGGY 1 cut(s) 435
Bse1I ACTGG 1 cut(s) 604
BseBI CCWGG 1 cut(s) 806
BseDI CCNNGG 4 cut(s) 38, 39, 76, 142
BseGI GGATG 2 cut(s) 168, 412
BseLI CCNNNNNNNGG 1 cut(s) 12
BseNI ACTGG 1 cut(s) 604
BseSI GKGCMC 1 cut(s) 360
BseX3I CGGCCG 1 cut(s) 14
BseXI GCAGC 3 cut(s) 175, 178, 860
BsgI GTGCAG 2 cut(s) 324, 615
Bsh1285I CGRYCG 1 cut(s) 17
BshFI GGCC 2 cut(s) 16, 435
BshNI GGYRCC 1 cut(s) 327
BsiEI CGRYCG 1 cut(s) 17
BsiHKAI GWGCWC 1 cut(s) 129
BsiHKCI CYCGRG 1 cut(s) 38
BsiSI CCGG 2 cut(s) 39, 436
BslI CCNNNNNNNGG 1 cut(s) 12
BsnI GGCC 2 cut(s) 16, 435
BsoBI CYCGRG 1 cut(s) 38
Bsp1286I GDGCHC 2 cut(s) 129, 360
Bsp143I GATC 6 cut(s) 381, 613, 644, 693, 733, 857
Bsp19I CCATGG 2 cut(s) 76, 142
BspACI CCGC 3 cut(s) 52, 223, 574
BspANI GGCC 2 cut(s) 16, 435
BspHI TCATGA 1 cut(s) 736
BspLI GGNNCC 2 cut(s) 329, 663
BspPI GGATC 1 cut(s) 652
BspT107I GGYRCC 1 cut(s) 327
BsrBI CCGCTC 1 cut(s) 574
BsrFI RCCGGY 1 cut(s) 435
BsrI ACTGG 1 cut(s) 604
BssAI RCCGGY 1 cut(s) 435
BssECI CCNNGG 4 cut(s) 38, 39, 76, 142
BssMI GATC 6 cut(s) 381, 613, 644, 693, 733, 857
BssT1I CCWWGG 2 cut(s) 76, 142
Bst2UI CCWGG 1 cut(s) 806
Bst4CI ACNGT 2 cut(s) 362, 637
BstBAI YACGTR 1 cut(s) 302
BstC8I GCNNGC 1 cut(s) 594
BstDEI CTNAG 1 cut(s) 469
BstDSI CCRYGG 2 cut(s) 76, 142
BstF5I GGATG 2 cut(s) 168, 412
BstKTI GATC 6 cut(s) 384, 616, 647, 696, 736, 860
BstMBI GATC 6 cut(s) 381, 613, 644, 693, 733, 857
BstMCI CGRYCG 1 cut(s) 17
BstNI CCWGG 1 cut(s) 806
BstSCI CCNGG 3 cut(s) 37, 38, 804
BstSFI CTRYAG 1 cut(s) 414
BstSLI GKGCMC 1 cut(s) 360
BstV1I GCAGC 3 cut(s) 175, 178, 860
BstX2I RGATCY 1 cut(s) 857
BstYI RGATCY 1 cut(s) 857
BstZI CGGCCG 1 cut(s) 14
BsuRI GGCC 2 cut(s) 16, 435
BtgI CCRYGG 2 cut(s) 76, 142
BtsCI GGATG 2 cut(s) 168, 412
BtsI GCAGTG 2 cut(s) 384, 603
BtsIMutI CAGTG 2 cut(s) 384, 603
Cac8I GCNNGC 1 cut(s) 594
CciI TCATGA 1 cut(s) 736
Cfr10I RCCGGY 1 cut(s) 435
Cfr9I CCCGGG 1 cut(s) 38
Csp6I GTAC 1 cut(s) 400
CviAII CATG 5 cut(s) 77, 104, 143, 641, 737
CviJI RGCY 9 cut(s) 16, 75, 88, 127, 290, 435, 577, 731, 767
CviKI_1 RGCY 9 cut(s) 16, 75, 88, 127, 290, 435, 577, 731, 767
CviQI GTAC 1 cut(s) 400
DdeI CTNAG 1 cut(s) 469
DpnI GATC 6 cut(s) 383, 615, 646, 695, 735, 859
DpnII GATC 6 cut(s) 381, 613, 644, 693, 733, 857
EaeI YGGCCR 2 cut(s) 14, 433
EagI CGGCCG 1 cut(s) 14
Ecl136II GAGCTC 1 cut(s) 127
EclXI CGGCCG 1 cut(s) 14
Eco130I CCWWGG 2 cut(s) 76, 142
Eco24I GRGCYC 1 cut(s) 129
Eco52I CGGCCG 1 cut(s) 14
Eco53kI GAGCTC 1 cut(s) 127
Eco88I CYCGRG 1 cut(s) 38
EcoICRI GAGCTC 1 cut(s) 127
EcoRI GAATTC 1 cut(s) 740
EcoRII CCWGG 1 cut(s) 804
EcoT14I CCWWGG 2 cut(s) 76, 142
EcoT38I GRGCYC 1 cut(s) 129
ErhI CCWWGG 2 cut(s) 76, 142
FaeI CATG 5 cut(s) 80, 107, 146, 644, 740
FatI CATG 5 cut(s) 76, 103, 142, 640, 736
FbaI TGATCA 2 cut(s) 613, 733
Fnu4HI GCNGC 4 cut(s) 189, 192, 575, 849
FokI GGATG 2 cut(s) 155, 419
FriOI GRGCYC 1 cut(s) 129
Fsp4HI GCNGC 4 cut(s) 189, 192, 575, 849
GluI GCNGC 4 cut(s) 189, 192, 575, 849
HaeIII GGCC 2 cut(s) 16, 435
HapII CCGG 2 cut(s) 39, 436
Hin1II CATG 5 cut(s) 80, 107, 146, 644, 740
HincII GTYRAC 1 cut(s) 23
HindII GTYRAC 1 cut(s) 23
HindIII AAGCTT 1 cut(s) 86
HinfI GANTC 4 cut(s) 19, 57, 267, 492
HpaII CCGG 2 cut(s) 39, 436
HphI GGTGA 3 cut(s) 190, 794, 822
Hpy166II GTNNAC 2 cut(s) 23, 181
Hpy188III TCNNGA 4 cut(s) 446, 557, 737, 870
Hpy8I GTNNAC 2 cut(s) 23, 181
HpyAV CCTTC 3 cut(s) 248, 455, 719
HpyCH4III ACNGT 2 cut(s) 362, 637
HpyCH4IV ACGT 1 cut(s) 301
HpyCH4V TGCA 6 cut(s) 305, 347, 377, 395, 596, 624
HpyF3I CTNAG 1 cut(s) 469
HpySE526I ACGT 1 cut(s) 301
Hsp92II CATG 5 cut(s) 80, 107, 146, 644, 740
Ksp22I TGATCA 2 cut(s) 613, 733
Kzo9I GATC 6 cut(s) 381, 613, 644, 693, 733, 857
LmnI GCTCC 3 cut(s) 124, 571, 728
Lsp1109I GCAGC 3 cut(s) 175, 178, 860
LweI GCATC 2 cut(s) 177, 664
MaeII ACGT 1 cut(s) 301
MaeIII GTNAC 4 cut(s) 7, 272, 550, 828
MalI GATC 6 cut(s) 383, 615, 646, 695, 735, 859
MbiI CCGCTC 1 cut(s) 574
MboI GATC 6 cut(s) 381, 613, 644, 693, 733, 857
MboII GAAGA 2 cut(s) 532, 683
MfeI CAATTG 3 cut(s) 348, 609, 771
MflI RGATCY 1 cut(s) 857
MhlI GDGCHC 2 cut(s) 129, 360
MluCI AATT 7 cut(s) 210, 348, 609, 619, 740, 771, 865
MlyI GAGTC 2 cut(s) 28, 66
MmeI TCCRAC 2 cut(s) 177, 549
MnlI CCTC 3 cut(s) 166, 446, 524
MseI TTAA 3 cut(s) 441, 789, 864
MslI CAYNNNNRTG 1 cut(s) 173
MspI CCGG 2 cut(s) 39, 436
MspR9I CCNGG 3 cut(s) 39, 40, 806
MunI CAATTG 3 cut(s) 348, 609, 771
MvaI CCWGG 1 cut(s) 806
NciI CCSGG 2 cut(s) 39, 40
NcoI CCATGG 2 cut(s) 76, 142
NdeII GATC 6 cut(s) 381, 613, 644, 693, 733, 857
NlaIII CATG 5 cut(s) 80, 107, 146, 644, 740
NlaIV GGNNCC 2 cut(s) 329, 663
NmeAIII GCCGAG 1 cut(s) 42
NmuCI GTSAC 1 cut(s) 828
PagI TCATGA 1 cut(s) 736
PfeI GAWTC 2 cut(s) 267, 492
PkrI GCNGC 4 cut(s) 190, 193, 576, 850
PleI GAGTC 2 cut(s) 27, 65
PpsI GAGTC 2 cut(s) 27, 65
Ppu21I YACGTR 1 cut(s) 302
Psp124BI GAGCTC 1 cut(s) 129
Psp6I CCWGG 1 cut(s) 804
PspGI CCWGG 1 cut(s) 804
PspN4I GGNNCC 2 cut(s) 329, 663
PsuI RGATCY 1 cut(s) 857
RsaI GTAC 1 cut(s) 401
RsaNI GTAC 1 cut(s) 400
RseI CAYNNNNRTG 1 cut(s) 173
SacI GAGCTC 1 cut(s) 129
SaqAI TTAA 3 cut(s) 441, 789, 864
SatI GCNGC 4 cut(s) 189, 192, 575, 849
Sau3AI GATC 6 cut(s) 381, 613, 644, 693, 733, 857
SchI GAGTC 2 cut(s) 28, 66
ScrFI CCNGG 3 cut(s) 39, 40, 806
SduI GDGCHC 2 cut(s) 129, 360
SfaNI GCATC 2 cut(s) 177, 664
SfcI CTRYAG 1 cut(s) 414
SmaI CCCGGG 1 cut(s) 40
SmiMI CAYNNNNRTG 1 cut(s) 173
SmlI CTYRAG 1 cut(s) 555
SmoI CTYRAG 1 cut(s) 555
Sse9I AATT 7 cut(s) 210, 348, 609, 619, 740, 771, 865
SsiI CCGC 3 cut(s) 52, 223, 574
SspI AATATT 1 cut(s) 427
SstI GAGCTC 1 cut(s) 129
StyD4I CCNGG 3 cut(s) 37, 38, 804
StyI CCWWGG 2 cut(s) 76, 142
TaaI ACNGT 2 cut(s) 362, 637
TaiI ACGT 1 cut(s) 304
TaqI TCGA 2 cut(s) 265, 547
TasI AATT 7 cut(s) 210, 348, 609, 619, 740, 771, 865
TatI WGTACW 1 cut(s) 399
TauI GCSGC 1 cut(s) 577
TfiI GAWTC 2 cut(s) 267, 492
Tru1I TTAA 3 cut(s) 441, 789, 864
Tru9I TTAA 3 cut(s) 441, 789, 864
TscAI CASTG 2 cut(s) 384, 603
TseFI GTSAC 1 cut(s) 828
TseI GCWGC 3 cut(s) 188, 191, 848
Tsp45I GTSAC 1 cut(s) 828
TspDTI ATGAA 5 cut(s) 249, 629, 738, 753, 775
TspMI CCCGGG 1 cut(s) 38
TspRI CASTG 2 cut(s) 384, 603
XapI RAATTY 1 cut(s) 740
XmaI CCCGGG 1 cut(s) 38
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.