E3 ubiquitin ligase BIG
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G47180 |
| fragaria_vesca | FvH4_2g27450 |
| malus_domestica | MD00G1028500.v1.1 MD15G1344800.v1.1 |
| prunus_persica | Prupe.1G493000_v2.0.a1 |
| pyrus_communis | pycom08g13690 pycom15g30940 |
| rosa_chinensis | RchiOBHm_Chr6g0296291 |
| rosa_laevigata | RLG00000011709 |
| rosa_multiflora | Rmu_sc0004708.1_g000007 |
| rosa_roxburghii | Rroxscaffold_7G00171660 Rroxscaffold_7G00178410 |
| rosa_rugosa | Rorug06G0260700 |
| rosa_samantha | Rh6AG372400 Rh6BG380400 Rh6CG385800 Rh6DG373300 |
| rosa_wichuraiana | Rw6G032470 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 298 |
| AccI | GTMKAC | 1 cut(s) | 198 |
| AccII | CGCG | 1 cut(s) | 37 |
| AciI | CCGC | 2 cut(s) | 35, 37 |
| AclWI | GGATC | 1 cut(s) | 26 |
| AcsI | RAATTY | 1 cut(s) | 186 |
| AcuI | CTGAAG | 1 cut(s) | 563 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 298 |
| AjiI | CACGTC | 1 cut(s) | 328 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 297, 329 |
| AluBI | AGCT | 3 cut(s) | 42, 75, 573 |
| AluI | AGCT | 3 cut(s) | 42, 75, 573 |
| Alw21I | GWGCWC | 2 cut(s) | 77, 117 |
| AlwI | GGATC | 1 cut(s) | 26 |
| ApeKI | GCWGC | 3 cut(s) | 527, 570, 606 |
| ApoI | RAATTY | 1 cut(s) | 186 |
| AsuHPI | GGTGA | 3 cut(s) | 278, 329, 527 |
| BanII | GRGCYC | 1 cut(s) | 77 |
| Bbv12I | GWGCWC | 2 cut(s) | 77, 117 |
| BbvI | GCAGC | 3 cut(s) | 514, 582, 618 |
| BccI | CCATC | 1 cut(s) | 506 |
| BclI | TGATCA | 1 cut(s) | 181 |
| BfaI | CTAG | 1 cut(s) | 89 |
| BisI | GCNGC | 3 cut(s) | 528, 571, 607 |
| BlsI | GCNGC | 3 cut(s) | 529, 572, 608 |
| BmgBI | CACGTC | 1 cut(s) | 328 |
| BmsI | GCATC | 3 cut(s) | 117, 232, 433 |
| BsaBI | GATNNNNATC | 1 cut(s) | 180 |
| BsaJI | CCNNGG | 1 cut(s) | 35 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 298 |
| Bse3DI | GCAATG | 2 cut(s) | 409, 530 |
| Bse8I | GATNNNNATC | 1 cut(s) | 180 |
| BseDI | CCNNGG | 1 cut(s) | 35 |
| BseGI | GGATG | 3 cut(s) | 132, 337, 424 |
| BseJI | GATNNNNATC | 1 cut(s) | 180 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 298 |
| BseMI | GCAATG | 2 cut(s) | 409, 530 |
| BseMII | CTCAG | 1 cut(s) | 210 |
| BseXI | GCAGC | 3 cut(s) | 514, 582, 618 |
| BseYI | CCCAGC | 1 cut(s) | 398 |
| Bsh1236I | CGCG | 1 cut(s) | 37 |
| BsiHKAI | GWGCWC | 2 cut(s) | 77, 117 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 298 |
| Bsp1286I | GDGCHC | 2 cut(s) | 77, 117 |
| Bsp143I | GATC | 5 cut(s) | 31, 58, 181, 256, 319 |
| BspACI | CCGC | 2 cut(s) | 35, 37 |
| BspCNI | CTCAG | 1 cut(s) | 211 |
| BspFNI | CGCG | 1 cut(s) | 37 |
| BspHI | TCATGA | 1 cut(s) | 190 |
| BspPI | GGATC | 1 cut(s) | 26 |
| BsrDI | GCAATG | 2 cut(s) | 409, 530 |
| BssECI | CCNNGG | 1 cut(s) | 35 |
| BssMI | GATC | 5 cut(s) | 31, 58, 181, 256, 319 |
| Bst4CI | ACNGT | 1 cut(s) | 287 |
| Bst6I | CTCTTC | 2 cut(s) | 9, 375 |
| BstC8I | GCNNGC | 3 cut(s) | 23, 117, 575 |
| BstDEI | CTNAG | 1 cut(s) | 219 |
| BstDSI | CCRYGG | 1 cut(s) | 35 |
| BstF5I | GGATG | 3 cut(s) | 132, 337, 424 |
| BstFNI | CGCG | 1 cut(s) | 37 |
| BstKTI | GATC | 5 cut(s) | 34, 61, 184, 259, 322 |
| BstMBI | GATC | 5 cut(s) | 31, 58, 181, 256, 319 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 468, 527, 603 |
| BstUI | CGCG | 1 cut(s) | 37 |
| BstV1I | GCAGC | 3 cut(s) | 514, 582, 618 |
| BstX2I | RGATCY | 1 cut(s) | 31 |
| BstYI | RGATCY | 1 cut(s) | 31 |
| BtgI | CCRYGG | 1 cut(s) | 35 |
| BtrI | CACGTC | 1 cut(s) | 328 |
| BtsCI | GGATG | 3 cut(s) | 132, 337, 424 |
| BtsIMutI | CAGTG | 1 cut(s) | 292 |
| Cac8I | GCNNGC | 3 cut(s) | 23, 117, 575 |
| CciI | TCATGA | 1 cut(s) | 190 |
| Cfr42I | CCGCGG | 1 cut(s) | 38 |
| CviAII | CATG | 2 cut(s) | 94, 191 |
| CviJI | RGCY | 7 cut(s) | 42, 75, 92, 521, 527, 573, 577 |
| CviKI_1 | RGCY | 7 cut(s) | 42, 75, 92, 521, 527, 573, 577 |
| DdeI | CTNAG | 1 cut(s) | 219 |
| DpnI | GATC | 5 cut(s) | 33, 60, 183, 258, 321 |
| DpnII | GATC | 5 cut(s) | 31, 58, 181, 256, 319 |
| Eam1104I | CTCTTC | 2 cut(s) | 9, 375 |
| EarI | CTCTTC | 2 cut(s) | 9, 375 |
| Ecl136II | GAGCTC | 1 cut(s) | 75 |
| Eco24I | GRGCYC | 1 cut(s) | 77 |
| Eco53kI | GAGCTC | 1 cut(s) | 75 |
| Eco57I | CTGAAG | 1 cut(s) | 563 |
| EcoICRI | GAGCTC | 1 cut(s) | 75 |
| EcoT38I | GRGCYC | 1 cut(s) | 77 |
| FaeI | CATG | 2 cut(s) | 97, 194 |
| FatI | CATG | 2 cut(s) | 93, 190 |
| FbaI | TGATCA | 1 cut(s) | 181 |
| FblI | GTMKAC | 1 cut(s) | 198 |
| Fnu4HI | GCNGC | 3 cut(s) | 528, 571, 607 |
| FokI | GGATG | 3 cut(s) | 139, 344, 411 |
| FriOI | GRGCYC | 1 cut(s) | 77 |
| Fsp4HI | GCNGC | 3 cut(s) | 528, 571, 607 |
| FspBI | CTAG | 1 cut(s) | 89 |
| GluI | GCNGC | 3 cut(s) | 528, 571, 607 |
| GsaI | CCCAGC | 1 cut(s) | 402 |
| Hin1II | CATG | 2 cut(s) | 97, 194 |
| HincII | GTYRAC | 1 cut(s) | 199 |
| HindII | GTYRAC | 1 cut(s) | 199 |
| HphI | GGTGA | 3 cut(s) | 278, 329, 527 |
| Hpy166II | GTNNAC | 2 cut(s) | 199, 542 |
| Hpy188I | TCNGA | 6 cut(s) | 31, 58, 79, 220, 459, 582 |
| Hpy188III | TCNNGA | 3 cut(s) | 191, 236, 323 |
| Hpy8I | GTNNAC | 2 cut(s) | 199, 542 |
| Hpy99I | CGWCG | 1 cut(s) | 203 |
| HpyCH4III | ACNGT | 1 cut(s) | 287 |
| HpyCH4IV | ACGT | 1 cut(s) | 327 |
| HpyCH4V | TGCA | 4 cut(s) | 103, 424, 530, 606 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 468, 527, 603 |
| HpyF3I | CTNAG | 1 cut(s) | 219 |
| HpySE526I | ACGT | 1 cut(s) | 327 |
| Hsp92II | CATG | 2 cut(s) | 97, 194 |
| Ksp22I | TGATCA | 1 cut(s) | 181 |
| KspI | CCGCGG | 1 cut(s) | 38 |
| Kzo9I | GATC | 5 cut(s) | 31, 58, 181, 256, 319 |
| LmnI | GCTCC | 1 cut(s) | 39 |
| LpnPI | CCDG | 4 cut(s) | 109, 308, 412, 559 |
| Lsp1109I | GCAGC | 3 cut(s) | 514, 582, 618 |
| LweI | GCATC | 3 cut(s) | 117, 232, 433 |
| MaeI | CTAG | 1 cut(s) | 89 |
| MaeII | ACGT | 1 cut(s) | 327 |
| MaeIII | GTNAC | 2 cut(s) | 266, 287 |
| MalI | GATC | 5 cut(s) | 33, 60, 183, 258, 321 |
| MboI | GATC | 5 cut(s) | 31, 58, 181, 256, 319 |
| MflI | RGATCY | 1 cut(s) | 31 |
| MhlI | GDGCHC | 2 cut(s) | 77, 117 |
| MluCI | AATT | 5 cut(s) | 186, 350, 440, 450, 651 |
| MnlI | CCTC | 6 cut(s) | 214, 226, 295, 340, 383, 511 |
| MseI | TTAA | 2 cut(s) | 44, 585 |
| MslI | CAYNNNNRTG | 2 cut(s) | 98, 237 |
| MspA1I | CMGCKG | 2 cut(s) | 37, 573 |
| MvnI | CGCG | 1 cut(s) | 37 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 468, 527, 603 |
| NdeII | GATC | 5 cut(s) | 31, 58, 181, 256, 319 |
| NlaIII | CATG | 2 cut(s) | 97, 194 |
| NmuCI | GTSAC | 2 cut(s) | 266, 287 |
| PagI | TCATGA | 1 cut(s) | 190 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 298 |
| PkrI | GCNGC | 3 cut(s) | 529, 572, 608 |
| Psp124BI | GAGCTC | 1 cut(s) | 77 |
| PspFI | CCCAGC | 1 cut(s) | 398 |
| PsuI | RGATCY | 1 cut(s) | 31 |
| PvuII | CAGCTG | 1 cut(s) | 573 |
| RseI | CAYNNNNRTG | 2 cut(s) | 98, 237 |
| SacI | GAGCTC | 1 cut(s) | 77 |
| SacII | CCGCGG | 1 cut(s) | 38 |
| SalI | GTCGAC | 1 cut(s) | 197 |
| SaqAI | TTAA | 2 cut(s) | 44, 585 |
| SatI | GCNGC | 3 cut(s) | 528, 571, 607 |
| Sau3AI | GATC | 5 cut(s) | 31, 58, 181, 256, 319 |
| SduI | GDGCHC | 2 cut(s) | 77, 117 |
| SetI | ASST | 5 cut(s) | 44, 77, 330, 394, 575 |
| SfaNI | GCATC | 3 cut(s) | 117, 232, 433 |
| Sfr303I | CCGCGG | 1 cut(s) | 38 |
| SgrBI | CCGCGG | 1 cut(s) | 38 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 98, 237 |
| Sse9I | AATT | 5 cut(s) | 186, 350, 440, 450, 651 |
| SsiI | CCGC | 2 cut(s) | 35, 37 |
| SspMI | CTAG | 1 cut(s) | 89 |
| SstI | GAGCTC | 1 cut(s) | 77 |
| TaaI | ACNGT | 1 cut(s) | 287 |
| TaiI | ACGT | 1 cut(s) | 330 |
| TaqI | TCGA | 3 cut(s) | 132, 198, 255 |
| TasI | AATT | 5 cut(s) | 186, 350, 440, 450, 651 |
| Tru1I | TTAA | 2 cut(s) | 44, 585 |
| Tru9I | TTAA | 2 cut(s) | 44, 585 |
| TscAI | CASTG | 1 cut(s) | 292 |
| TseFI | GTSAC | 2 cut(s) | 266, 287 |
| TseI | GCWGC | 3 cut(s) | 527, 570, 606 |
| Tsp45I | GTSAC | 2 cut(s) | 266, 287 |
| TspDTI | ATGAA | 8 cut(s) | 73, 179, 180, 348, 361, 420, 522, 609 |
| TspRI | CASTG | 1 cut(s) | 292 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 298 |
| XapI | RAATTY | 1 cut(s) | 186 |
| XmiI | GTMKAC | 1 cut(s) | 198 |
| XspI | CTAG | 1 cut(s) | 89 |