E3 ubiquitin ligase BIG
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G47180 |
| fragaria_vesca | FvH4_2g27450 |
| malus_domestica | MD00G1028500.v1.1 MD15G1344800.v1.1 |
| prunus_persica | Prupe.1G493000_v2.0.a1 |
| pyrus_communis | pycom08g13690 pycom15g30940 |
| rosa_chinensis | RchiOBHm_Chr6g0296291 |
| rosa_laevigata | RLG00000011709 |
| rosa_multiflora | Rmu_sc0004708.1_g000007 |
| rosa_roxburghii | Rroxscaffold_7G00171660 Rroxscaffold_7G00178410 |
| rosa_rugosa | Rorug06G0260700 |
| rosa_samantha | Rh6AG372400 Rh6BG380400 Rh6CG385800 Rh6DG373300 |
| rosa_wichuraiana | Rw6G032470 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 334 |
| AciI | CCGC | 2 cut(s) | 292, 309 |
| AcsI | RAATTY | 1 cut(s) | 111 |
| AflIII | ACRYGT | 1 cut(s) | 119 |
| AjiI | CACGTC | 1 cut(s) | 31 |
| AjuI | GAANNNNNNNTTGG | 1 cut(s) | 32 |
| AoxI | GGCC | 1 cut(s) | 310 |
| ApoI | RAATTY | 1 cut(s) | 111 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 235, 267 |
| AspS9I | GGNCC | 1 cut(s) | 311 |
| AsuHPI | GGTGA | 1 cut(s) | 32 |
| BccI | CCATC | 1 cut(s) | 209 |
| BisI | GCNGC | 2 cut(s) | 293, 310 |
| BlsI | GCNGC | 2 cut(s) | 294, 311 |
| BmgBI | CACGTC | 1 cut(s) | 31 |
| BmgT120I | GGNCC | 1 cut(s) | 311 |
| BmiI | GGNNCC | 1 cut(s) | 313 |
| BmsI | GCATC | 1 cut(s) | 136 |
| Bse3DI | GCAATG | 1 cut(s) | 112 |
| BseGI | GGATG | 2 cut(s) | 40, 127 |
| BseMI | GCAATG | 1 cut(s) | 112 |
| BseYI | CCCAGC | 1 cut(s) | 101 |
| BsgI | GTGCAG | 1 cut(s) | 214 |
| BshFI | GGCC | 1 cut(s) | 312 |
| BslFI | GGGAC | 1 cut(s) | 295 |
| BsmFI | GGGAC | 1 cut(s) | 295 |
| BsnI | GGCC | 1 cut(s) | 312 |
| Bsp143I | GATC | 1 cut(s) | 22 |
| BspACI | CCGC | 2 cut(s) | 292, 309 |
| BspANI | GGCC | 1 cut(s) | 312 |
| BspLI | GGNNCC | 1 cut(s) | 313 |
| BsrDI | GCAATG | 1 cut(s) | 112 |
| BssMI | GATC | 1 cut(s) | 22 |
| Bst6I | CTCTTC | 2 cut(s) | 78, 260 |
| BstF5I | GGATG | 2 cut(s) | 40, 127 |
| BstKTI | GATC | 1 cut(s) | 25 |
| BstMBI | GATC | 1 cut(s) | 22 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 171 |
| BstNSI | RCATGY | 1 cut(s) | 123 |
| BsuRI | GGCC | 1 cut(s) | 312 |
| BtrI | CACGTC | 1 cut(s) | 31 |
| BtsCI | GGATG | 2 cut(s) | 40, 127 |
| Cfr13I | GGNCC | 1 cut(s) | 311 |
| CviAII | CATG | 1 cut(s) | 120 |
| CviJI | RGCY | 2 cut(s) | 295, 312 |
| CviKI_1 | RGCY | 2 cut(s) | 295, 312 |
| DpnI | GATC | 1 cut(s) | 24 |
| DpnII | GATC | 1 cut(s) | 22 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 334 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 334 |
| Eam1104I | CTCTTC | 2 cut(s) | 78, 260 |
| EarI | CTCTTC | 2 cut(s) | 78, 260 |
| FaeI | CATG | 1 cut(s) | 123 |
| FaiI | YATR | 8 cut(s) | 48, 77, 121, 139, 196, 204, 210, 248 |
| FaqI | GGGAC | 1 cut(s) | 295 |
| FatI | CATG | 1 cut(s) | 119 |
| Fnu4HI | GCNGC | 2 cut(s) | 293, 310 |
| FokI | GGATG | 2 cut(s) | 47, 114 |
| Fsp4HI | GCNGC | 2 cut(s) | 293, 310 |
| GluI | GCNGC | 2 cut(s) | 293, 310 |
| GsaI | CCCAGC | 1 cut(s) | 105 |
| HaeIII | GGCC | 1 cut(s) | 312 |
| Hin1II | CATG | 1 cut(s) | 123 |
| HphI | GGTGA | 1 cut(s) | 32 |
| Hpy188I | TCNGA | 1 cut(s) | 162 |
| Hpy188III | TCNNGA | 1 cut(s) | 26 |
| HpyCH4IV | ACGT | 1 cut(s) | 30 |
| HpyCH4V | TGCA | 2 cut(s) | 127, 231 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 171 |
| HpySE526I | ACGT | 1 cut(s) | 30 |
| Hsp92II | CATG | 1 cut(s) | 123 |
| Kzo9I | GATC | 1 cut(s) | 22 |
| LpnPI | CCDG | 3 cut(s) | 11, 115, 241 |
| LweI | GCATC | 1 cut(s) | 136 |
| MaeII | ACGT | 1 cut(s) | 30 |
| MaeIII | GTNAC | 2 cut(s) | 241, 325 |
| MalI | GATC | 1 cut(s) | 24 |
| MboI | GATC | 1 cut(s) | 22 |
| MboII | GAAGA | 5 cut(s) | 20, 95, 224, 277, 286 |
| MluCI | AATT | 5 cut(s) | 53, 111, 143, 153, 286 |
| MnlI | CCTC | 3 cut(s) | 43, 86, 250 |
| MseI | TTAA | 1 cut(s) | 222 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 171 |
| NdeII | GATC | 1 cut(s) | 22 |
| NlaIII | CATG | 1 cut(s) | 123 |
| NlaIV | GGNNCC | 1 cut(s) | 313 |
| NmuCI | GTSAC | 2 cut(s) | 241, 325 |
| NspI | RCATGY | 1 cut(s) | 123 |
| PciI | ACATGT | 1 cut(s) | 119 |
| PkrI | GCNGC | 2 cut(s) | 294, 311 |
| PscI | ACATGT | 1 cut(s) | 119 |
| PspFI | CCCAGC | 1 cut(s) | 101 |
| PspN4I | GGNNCC | 1 cut(s) | 313 |
| PspPI | GGNCC | 1 cut(s) | 311 |
| SaqAI | TTAA | 1 cut(s) | 222 |
| SatI | GCNGC | 2 cut(s) | 293, 310 |
| Sau3AI | GATC | 1 cut(s) | 22 |
| Sau96I | GGNCC | 1 cut(s) | 311 |
| SetI | ASST | 3 cut(s) | 33, 97, 261 |
| SfaNI | GCATC | 1 cut(s) | 136 |
| SgeI | CNNG | 7 cut(s) | 38, 43, 77, 114, 132, 178, 240 |
| Sse9I | AATT | 5 cut(s) | 53, 111, 143, 153, 286 |
| SsiI | CCGC | 2 cut(s) | 292, 309 |
| TaiI | ACGT | 1 cut(s) | 33 |
| TasI | AATT | 5 cut(s) | 53, 111, 143, 153, 286 |
| TauI | GCSGC | 2 cut(s) | 295, 312 |
| Tru1I | TTAA | 1 cut(s) | 222 |
| Tru9I | TTAA | 1 cut(s) | 222 |
| TseFI | GTSAC | 2 cut(s) | 241, 325 |
| Tsp45I | GTSAC | 2 cut(s) | 241, 325 |
| TspDTI | ATGAA | 5 cut(s) | 51, 64, 123, 225, 287 |
| XapI | RAATTY | 1 cut(s) | 111 |
| XceI | RCATGY | 1 cut(s) | 123 |