RLG00000011941
NAC Family

Dol-P-Man Man(5)GlcNAc(2)-PP-Dol

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Forward (+)
13946530 .. 13949329
2800 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000011941

Sequence Viewer

Length: 1299 bp
ATGGCGGTCAAATCGGCGCGGAGGGCGAAATCGTCGCGGCGGCACCAAATTTCCAAGCCCTGGATCCCCACACTGCTCCAAAACCCTAAGGTAGCCTCCGCCTCCGCTTTGCTCATCTTCGATGCGGTCCTCACCGCCCTCATCATTGCCTACGTCCCTTATACGAAGATCGATTGGGACGCTTACATGTCTCAGGTCAATGGGTTTCTTGGTGGAGAAAGAGACTATAATAACTTGAAAGGAGACACAGGGCCACTGGTGTATCCTGCTGGTTTTTTATATGCTTATTCTGCTATTCAGTACGTTACAGGAAGCCAAGTTCATCCAGCTCAGATTTTGTTTGGGGTTCTGTACATTATAAACTTGGGAATCATGTTTTACATCTATGTGAAGACTGATGTGGTTCCATGGTGGGCTCTTGCGTTGCTTTGTCTATCAAAAAGAGTGCATTCTATTTTTGTGCTCCGACTTTTTAATGACTGTTTGGCCATGTTGCTACTGCATGCTTCATTAGCCTCATTTCTTCACCAAAGGTGGCATCTAGGATTGATCATTTTCAGTGGTGCTGTTTCGATAAAGATGAATGTGCTCCTCTATGCTCCACCTCTTCTACTCCTCATGTTAAAGGCTATGGATATCAGTGGAGTGATATCAGCTTTGTTTGGTGCAGCTCTTGTCCAGATACTGCTGGGGTTACCTTTCATCATGTCTCATCCATTTGCATACATCTCAAGAGCCTTTAATCTTGGCCGTGTATTCATCCACTTCTGGTCTGTTAATTTCAAGTTCCTTCCTGAGCCAATATTTGTCTCCAAGGCATTTGCAATCTCATTGCTGGTTGTACACCTTGTTTTACTAGCAGCTTTTGCTCACTATAGATGGTGCAAGCATGAAGGAGGAGTTTTCAAATTTTTGTATTCTAGACTTGTTTCTATAAAACTCAAATTTGCTCTTACAAATACCCATTCCTACAAGGCTCTTAAGAAAGAACATATTCTGACAACTATGTTCGTTGGAAATTTCATCGGCATTCTATGTGCCCGATCACTGCATTATCAATTCTACTCTTGGTATTTCCACACATTACCTTATTTATTGTGGAAAACACCTTTTCCTTCGTTTCTACGTGTAATATTGTTTACTGGGGTGGAGCTTTGCTGGAATGTGTATCCTTCCAACCTTTACTCATCAGCATTGCTTCTTGGTTTCCACTTAGTAATACTATTTGGTCTGTGGTCTGCCCCATCCGAATCTCCTTACATGGACAAGAAAGTATCGACTCAAGACAAACACAAATGA

Protein Analysis

433

Amino Acids

49.08

Weight (kDa)

9.74

Isoelectric Point (pI)

41.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ALG3 PF05208 36 - 397 1.6e-137 ALG3 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 359
AccB1I GGYRCC 1 cut(s) 42
AccB7I CCANNNNNTGG 1 cut(s) 60
AccII CGCG 2 cut(s) 19, 37
AciI CCGC 8 cut(s) 5, 19, 37, 40, 99, 105, 125, 135
AclWI GGATC 2 cut(s) 58, 71
AcoI YGGCCR 2 cut(s) 486, 748
AcsI RAATTY 4 cut(s) 48, 908, 944, 1018
AfaI GTAC 3 cut(s) 302, 353, 843
AfiI CCNNNNNNNGG 1 cut(s) 60
AflII CTTAAG 1 cut(s) 980
AflIII ACRYGT 2 cut(s) 186, 1126
AgsI TTSAA 3 cut(s) 238, 784, 907
AjnI CCWGG 1 cut(s) 59
AloI GAACNNNNNNTCC 2 cut(s) 303, 335
AluBI AGCT 5 cut(s) 329, 656, 671, 863, 1153
AluI AGCT 5 cut(s) 329, 656, 671, 863, 1153
Alw21I GWGCWC 2 cut(s) 465, 591
Alw26I GTCTC 5 cut(s) 195, 216, 237, 714, 814
AlwI GGATC 2 cut(s) 58, 71
AlwNI CAGNNNCTG 1 cut(s) 685
AoxI GGCC 3 cut(s) 251, 486, 748
ApeKI GCWGC 2 cut(s) 668, 860
ApoI RAATTY 4 cut(s) 48, 908, 944, 1018
Asp700I GAANNNNTTC 1 cut(s) 993
AspLEI GCGC 1 cut(s) 19
AspS9I GGNCC 2 cut(s) 127, 251
AsuHPI GGTGA 2 cut(s) 124, 518
AvaII GGWCC 1 cut(s) 127
AxyI CCTNAGG 1 cut(s) 87
BaeGI GKGCMC 1 cut(s) 1042
BaeI ACNNNNGTAYC 2 cut(s) 245, 278
BalI TGGCCA 1 cut(s) 488
BamHI GGATCC 1 cut(s) 63
BanI GGYRCC 1 cut(s) 42
BanII GRGCYC 1 cut(s) 418
BbsI GAAGAC 1 cut(s) 398
Bbv12I GWGCWC 2 cut(s) 465, 591
BbvI GCAGC 2 cut(s) 680, 872
BccI CCATC 2 cut(s) 873, 1252
BceAI ACGGC 1 cut(s) 735
BciT130I CCWGG 1 cut(s) 61
BciVI GTATCC 2 cut(s) 273, 1179
BclI TGATCA 1 cut(s) 549
BcoDI GTCTC 5 cut(s) 195, 216, 237, 714, 814
BfaI CTAG 3 cut(s) 542, 857, 921
BfmI CTRYAG 1 cut(s) 874
BfrI CTTAAG 1 cut(s) 980
BfuI GTATCC 2 cut(s) 273, 1179
BisI GCNGC 4 cut(s) 38, 41, 669, 861
BlsI GCNGC 4 cut(s) 39, 42, 670, 862
Bme1390I CCNGG 1 cut(s) 61
Bme18I GGWCC 1 cut(s) 127
BmgT120I GGNCC 2 cut(s) 127, 251
BmiI GGNNCC 3 cut(s) 44, 65, 405
BmrFI CCNGG 1 cut(s) 61
BmrI ACTGGG 1 cut(s) 1152
BmsI GCATC 2 cut(s) 112, 547
BmuI ACTGGG 1 cut(s) 1152
BpiI GAAGAC 1 cut(s) 398
Bpu10I CCTNAGC 1 cut(s) 795
BpuEI CTTGAG 2 cut(s) 715, 1266
Bsa29I ATCGAT 1 cut(s) 171
BsaAI YACGTR 1 cut(s) 1127
BsaJI CCNNGG 3 cut(s) 59, 407, 813
Bsc4I CCNNNNNNNGG 1 cut(s) 60
Bse1I ACTGG 2 cut(s) 261, 1147
Bse21I CCTNAGG 1 cut(s) 87
Bse3DI GCAATG 3 cut(s) 144, 830, 1193
BseBI CCWGG 1 cut(s) 61
BseCI ATCGAT 1 cut(s) 171
BseDI CCNNGG 3 cut(s) 59, 407, 813
BseGI GGATG 4 cut(s) 322, 712, 759, 1244
BseLI CCNNNNNNNGG 1 cut(s) 60
BseMI GCAATG 3 cut(s) 144, 830, 1193
BseMII CTCAG 3 cut(s) 206, 344, 786
BseNI ACTGG 2 cut(s) 261, 1147
BseRI GAGGAG 3 cut(s) 581, 605, 912
BseSI GKGCMC 1 cut(s) 1042
BseXI GCAGC 2 cut(s) 680, 872
BseYI CCCAGC 1 cut(s) 688
BsgI GTGCAG 1 cut(s) 687
Bsh1236I CGCG 2 cut(s) 19, 37
BshFI GGCC 3 cut(s) 253, 488, 750
BshNI GGYRCC 1 cut(s) 42
BshVI ATCGAT 1 cut(s) 171
BsiHKAI GWGCWC 2 cut(s) 465, 591
BslFI GGGAC 2 cut(s) 140, 191
BslI CCNNNNNNNGG 1 cut(s) 60
BsmAI GTCTC 5 cut(s) 195, 216, 237, 714, 814
BsmFI GGGAC 2 cut(s) 140, 191
BsmI GAATGC 2 cut(s) 448, 1029
BsnI GGCC 3 cut(s) 253, 488, 750
Bsp1286I GDGCHC 4 cut(s) 418, 465, 591, 1042
Bsp1407I TGTACA 2 cut(s) 351, 841
Bsp143I GATC 4 cut(s) 63, 168, 549, 1043
Bsp19I CCATGG 1 cut(s) 407
BspACI CCGC 8 cut(s) 5, 19, 37, 40, 99, 105, 125, 135
BspANI GGCC 3 cut(s) 253, 488, 750
BspCNI CTCAG 3 cut(s) 205, 343, 787
BspDI ATCGAT 1 cut(s) 171
BspFNI CGCG 2 cut(s) 19, 37
BspLI GGNNCC 3 cut(s) 44, 65, 405
BspPI GGATC 2 cut(s) 58, 71
BspT107I GGYRCC 1 cut(s) 42
BspTI CTTAAG 1 cut(s) 980
BsrDI GCAATG 3 cut(s) 144, 830, 1193
BsrGI TGTACA 2 cut(s) 351, 841
BsrI ACTGG 2 cut(s) 261, 1147
BssECI CCNNGG 3 cut(s) 59, 407, 813
BssMI GATC 4 cut(s) 63, 168, 549, 1043
BssT1I CCWWGG 2 cut(s) 407, 813
Bst2UI CCWGG 1 cut(s) 61
Bst4CI ACNGT 1 cut(s) 482
Bst6I CTCTTC 1 cut(s) 612
BstAFI CTTAAG 1 cut(s) 980
BstAPI GCANNNNNTGC 1 cut(s) 866
BstAUI TGTACA 2 cut(s) 351, 841
BstBAI YACGTR 1 cut(s) 1127
BstC8I GCNNGC 2 cut(s) 504, 887
BstDEI CTNAG 5 cut(s) 87, 192, 330, 795, 1213
BstDSI CCRYGG 1 cut(s) 407
BstEII GGTNACC 1 cut(s) 693
BstF5I GGATG 4 cut(s) 322, 712, 759, 1244
BstFNI CGCG 2 cut(s) 19, 37
BstHHI GCGC 1 cut(s) 19
BstKTI GATC 4 cut(s) 66, 171, 552, 1046
BstMAI GTCTC 5 cut(s) 195, 216, 237, 714, 814
BstMBI GATC 4 cut(s) 63, 168, 549, 1043
BstMWI GCNNNNNNNGC 4 cut(s) 23, 290, 512, 866
BstNI CCWGG 1 cut(s) 61
BstNSI RCATGY 2 cut(s) 190, 506
BstPI GGTNACC 1 cut(s) 693
BstSCI CCNGG 1 cut(s) 59
BstSFI CTRYAG 1 cut(s) 874
BstSLI GKGCMC 1 cut(s) 1042
BstUI CGCG 2 cut(s) 19, 37
BstV1I GCAGC 2 cut(s) 680, 872
BstV2I GAAGAC 1 cut(s) 398
BstX2I RGATCY 1 cut(s) 63
BstYI RGATCY 1 cut(s) 63
Bsu15I ATCGAT 1 cut(s) 171
Bsu36I CCTNAGG 1 cut(s) 87
BsuI GTATCC 2 cut(s) 273, 1179
BsuRI GGCC 3 cut(s) 253, 488, 750
BsuTUI ATCGAT 1 cut(s) 171
BtgI CCRYGG 1 cut(s) 407
BtsCI GGATG 4 cut(s) 322, 712, 759, 1244
BtsI GCAGTG 2 cut(s) 71, 1046
BtsIMutI CAGTG 5 cut(s) 71, 254, 565, 646, 1046
Cac8I GCNNGC 2 cut(s) 504, 887
CaiI CAGNNNCTG 1 cut(s) 685
CfoI GCGC 1 cut(s) 19
Cfr13I GGNCC 2 cut(s) 127, 251
ClaI ATCGAT 1 cut(s) 171
CseI GACGC 1 cut(s) 188
Csp6I GTAC 3 cut(s) 301, 352, 842
CviAII CATG 9 cut(s) 187, 373, 408, 490, 503, 619, 706, 890, 1261
CviQI GTAC 3 cut(s) 301, 352, 842
DdeI CTNAG 5 cut(s) 87, 192, 330, 795, 1213
DpnI GATC 4 cut(s) 65, 170, 551, 1045
DpnII GATC 4 cut(s) 63, 168, 549, 1043
EaeI YGGCCR 2 cut(s) 486, 748
Eam1104I CTCTTC 1 cut(s) 612
EarI CTCTTC 1 cut(s) 612
EciI GGCGGA 1 cut(s) 88
Eco130I CCWWGG 2 cut(s) 407, 813
Eco24I GRGCYC 1 cut(s) 418
Eco32I GATATC 2 cut(s) 637, 651
Eco47I GGWCC 1 cut(s) 127
Eco81I CCTNAGG 1 cut(s) 87
Eco91I GGTNACC 1 cut(s) 693
EcoO65I GGTNACC 1 cut(s) 693
EcoRII CCWGG 1 cut(s) 59
EcoRV GATATC 2 cut(s) 637, 651
EcoT14I CCWWGG 2 cut(s) 407, 813
EcoT38I GRGCYC 1 cut(s) 418
ErhI CCWWGG 2 cut(s) 407, 813
FaeI CATG 9 cut(s) 190, 376, 411, 493, 506, 622, 709, 893, 1264
FaqI GGGAC 2 cut(s) 140, 191
FatI CATG 9 cut(s) 186, 372, 407, 489, 502, 618, 705, 889, 1260
FbaI TGATCA 1 cut(s) 549
Fnu4HI GCNGC 4 cut(s) 38, 41, 669, 861
FokI GGATG 4 cut(s) 309, 699, 746, 1231
FriOI GRGCYC 1 cut(s) 418
Fsp4HI GCNGC 4 cut(s) 38, 41, 669, 861
FspBI CTAG 3 cut(s) 542, 857, 921
GlaI GCGC 1 cut(s) 18
GluI GCNGC 4 cut(s) 38, 41, 669, 861
GsaI CCCAGC 1 cut(s) 692
HaeIII GGCC 3 cut(s) 253, 488, 750
HgaI GACGC 1 cut(s) 188
HhaI GCGC 1 cut(s) 19
Hin1II CATG 9 cut(s) 190, 376, 411, 493, 506, 622, 709, 893, 1264
Hin6I GCGC 1 cut(s) 17
HinP1I GCGC 1 cut(s) 17
HinfI GANTC 3 cut(s) 369, 1250, 1279
HphI GGTGA 2 cut(s) 124, 518
Hpy166II GTNNAC 2 cut(s) 844, 1140
Hpy188I TCNGA 4 cut(s) 333, 467, 999, 1249
Hpy188III TCNNGA 5 cut(s) 679, 732, 794, 921, 1283
Hpy8I GTNNAC 2 cut(s) 844, 1140
Hpy99I CGWCG 1 cut(s) 37
HpyAV CCTTC 4 cut(s) 800, 887, 1125, 1182
HpyCH4III ACNGT 1 cut(s) 482
HpyCH4IV ACGT 3 cut(s) 153, 303, 1126
HpyCH4V TGCA 7 cut(s) 448, 502, 668, 722, 824, 885, 1051
HpyF10VI GCNNNNNNNGC 4 cut(s) 23, 290, 512, 866
HpyF3I CTNAG 5 cut(s) 87, 192, 330, 795, 1213
HpySE526I ACGT 3 cut(s) 153, 303, 1126
Hsp92II CATG 9 cut(s) 190, 376, 411, 493, 506, 622, 709, 893, 1264
HspAI GCGC 1 cut(s) 17
Ksp22I TGATCA 1 cut(s) 549
Kzo9I GATC 4 cut(s) 63, 168, 549, 1043
LmnI GCTCC 5 cut(s) 81, 468, 594, 604, 1150
Lsp1109I GCAGC 2 cut(s) 680, 872
LweI GCATC 2 cut(s) 112, 547
MaeI CTAG 3 cut(s) 542, 857, 921
MaeII ACGT 3 cut(s) 153, 303, 1126
MaeIII GTNAC 2 cut(s) 304, 693
MalI GATC 4 cut(s) 65, 170, 551, 1045
MboI GATC 4 cut(s) 63, 168, 549, 1043
MboII GAAGA 5 cut(s) 109, 178, 403, 515, 599
MflI RGATCY 1 cut(s) 63
MhlI GDGCHC 4 cut(s) 418, 465, 591, 1042
MlsI TGGCCA 1 cut(s) 488
MluCI AATT 6 cut(s) 48, 778, 908, 944, 1018, 1058
MluNI TGGCCA 1 cut(s) 488
MlyI GAGTC 1 cut(s) 1273
MmeI TCCRAC 3 cut(s) 490, 994, 1200
Mox20I TGGCCA 1 cut(s) 488
MroXI GAANNNNTTC 1 cut(s) 993
MscI TGGCCA 1 cut(s) 488
MseI TTAA 5 cut(s) 474, 623, 741, 777, 981
MslI CAYNNNNRTG 1 cut(s) 386
Msp20I TGGCCA 1 cut(s) 488
MspCI CTTAAG 1 cut(s) 980
MspR9I CCNGG 1 cut(s) 61
Mva1269I GAATGC 2 cut(s) 448, 1029
MvaI CCWGG 1 cut(s) 61
MvnI CGCG 2 cut(s) 19, 37
MwoI GCNNNNNNNGC 4 cut(s) 23, 290, 512, 866
NcoI CCATGG 1 cut(s) 407
NdeII GATC 4 cut(s) 63, 168, 549, 1043
NlaIII CATG 9 cut(s) 190, 376, 411, 493, 506, 622, 709, 893, 1264
NlaIV GGNNCC 3 cut(s) 44, 65, 405
NspI RCATGY 2 cut(s) 190, 506
PaeI GCATGC 1 cut(s) 506
PciI ACATGT 1 cut(s) 186
PctI GAATGC 2 cut(s) 448, 1029
PdmI GAANNNNTTC 1 cut(s) 993
PfeI GAWTC 2 cut(s) 369, 1250
PflMI CCANNNNNTGG 1 cut(s) 60
PkrI GCNGC 4 cut(s) 39, 42, 670, 862
PleI GAGTC 1 cut(s) 1273
PpsI GAGTC 1 cut(s) 1273
Ppu21I YACGTR 1 cut(s) 1127
PscI ACATGT 1 cut(s) 186
PsiI TTATAA 1 cut(s) 359
Psp6I CCWGG 1 cut(s) 59
PspEI GGTNACC 1 cut(s) 693
PspFI CCCAGC 1 cut(s) 688
PspGI CCWGG 1 cut(s) 59
PspN4I GGNNCC 3 cut(s) 44, 65, 405
PspPI GGNCC 2 cut(s) 127, 251
PstNI CAGNNNCTG 1 cut(s) 685
PsuI RGATCY 1 cut(s) 63
RsaI GTAC 3 cut(s) 302, 353, 843
RsaNI GTAC 3 cut(s) 301, 352, 842
RseI CAYNNNNRTG 1 cut(s) 386
SaqAI TTAA 5 cut(s) 474, 623, 741, 777, 981
SatI GCNGC 4 cut(s) 38, 41, 669, 861
Sau3AI GATC 4 cut(s) 63, 168, 549, 1043
Sau96I GGNCC 2 cut(s) 127, 251
SchI GAGTC 1 cut(s) 1273
ScrFI CCNGG 1 cut(s) 61
SduI GDGCHC 4 cut(s) 418, 465, 591, 1042
SfaNI GCATC 2 cut(s) 112, 547
SfcI CTRYAG 1 cut(s) 874
SinI GGWCC 1 cut(s) 127
SmiMI CAYNNNNRTG 1 cut(s) 386
SmlI CTYRAG 3 cut(s) 730, 980, 1281
SmoI CTYRAG 3 cut(s) 730, 980, 1281
SphI GCATGC 1 cut(s) 506
Sse9I AATT 6 cut(s) 48, 778, 908, 944, 1018, 1058
SsiI CCGC 8 cut(s) 5, 19, 37, 40, 99, 105, 125, 135
SspI AATATT 2 cut(s) 804, 1134
SspMI CTAG 3 cut(s) 542, 857, 921
StyD4I CCNGG 1 cut(s) 59
StyI CCWWGG 2 cut(s) 407, 813
TaaI ACNGT 1 cut(s) 482
TaiI ACGT 3 cut(s) 156, 306, 1129
TaqI TCGA 4 cut(s) 120, 171, 572, 1277
TasI AATT 6 cut(s) 48, 778, 908, 944, 1018, 1058
TatI WGTACW 2 cut(s) 351, 841
TauI GCSGC 2 cut(s) 40, 43
TfiI GAWTC 2 cut(s) 369, 1250
Tru1I TTAA 5 cut(s) 474, 623, 741, 777, 981
Tru9I TTAA 5 cut(s) 474, 623, 741, 777, 981
TscAI CASTG 5 cut(s) 78, 261, 565, 646, 1053
TseI GCWGC 2 cut(s) 668, 860
TspDTI ATGAA 7 cut(s) 311, 498, 596, 691, 748, 906, 1012
TspRI CASTG 5 cut(s) 78, 261, 565, 646, 1053
Van91I CCANNNNNTGG 1 cut(s) 60
Vha464I CTTAAG 1 cut(s) 980
VpaK11BI GGWCC 1 cut(s) 127
XapI RAATTY 4 cut(s) 48, 908, 944, 1018
XbaI TCTAGA 1 cut(s) 920
XceI RCATGY 2 cut(s) 190, 506
XmnI GAANNNNTTC 1 cut(s) 993
XspI CTAG 3 cut(s) 542, 857, 921
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.