RNA-binding protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g02790 FvH4_1g18000 |
| malus_domestica | MD02G1189700.v1.1 |
| prunus_persica | Prupe.6G216700_v2.0.a1 |
| pyrus_communis | pycom02g15380 |
| rosa_chinensis | RchiOBHm_Chr2g0087881 RchiOBHm_Chr2g0108481 |
| rosa_laevigata | RLG00000015909 RLG00000017672 |
| rosa_multiflora | Rmu_co8200454.1_g000001 Rmu_sc0002372.1_g000049 Rmu_sc0008385.1_g000021 Rmu_sc0014136.1_g000014 |
| rosa_roxburghii | Rroxscaffold_2G00135100 |
| rosa_rugosa | Rorug01G0479100 Rorug02G0153700 Rorug02G0155900 |
| rosa_samantha | Rh2AG033900 Rh2AG202400 Rh2BG033100 Rh2BG215400 Rh2CG033800 Rh2CG206600 Rh2DG033500 Rh2DG209700 |
| rosa_wichuraiana | Rw2G002660 Rw2G016180 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 520 |
| Acc36I | ACCTGC | 1 cut(s) | 520 |
| AccII | CGCG | 1 cut(s) | 95 |
| AciI | CCGC | 1 cut(s) | 95 |
| AcoI | YGGCCR | 1 cut(s) | 689 |
| AcsI | RAATTY | 2 cut(s) | 267, 359 |
| AcuI | CTGAAG | 3 cut(s) | 64, 372, 576 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 178, 704 |
| AflIII | ACRYGT | 1 cut(s) | 286 |
| AgsI | TTSAA | 4 cut(s) | 293, 461, 596, 674 |
| AluBI | AGCT | 1 cut(s) | 548 |
| AluI | AGCT | 1 cut(s) | 548 |
| Alw21I | GWGCWC | 1 cut(s) | 550 |
| Alw26I | GTCTC | 1 cut(s) | 360 |
| AoxI | GGCC | 2 cut(s) | 236, 689 |
| ApoI | RAATTY | 2 cut(s) | 267, 359 |
| AspLEI | GCGC | 1 cut(s) | 95 |
| AsuHPI | GGTGA | 1 cut(s) | 764 |
| BalI | TGGCCA | 1 cut(s) | 691 |
| BanII | GRGCYC | 1 cut(s) | 550 |
| Bbv12I | GWGCWC | 1 cut(s) | 550 |
| BccI | CCATC | 3 cut(s) | 218, 392, 582 |
| BclI | TGATCA | 2 cut(s) | 763, 790 |
| BcoDI | GTCTC | 1 cut(s) | 360 |
| BfaI | CTAG | 1 cut(s) | 141 |
| BfuAI | ACCTGC | 1 cut(s) | 520 |
| BmiI | GGNNCC | 1 cut(s) | 246 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 178, 704 |
| Bse1I | ACTGG | 1 cut(s) | 575 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 178, 704 |
| BseNI | ACTGG | 1 cut(s) | 575 |
| Bsh1236I | CGCG | 1 cut(s) | 95 |
| BshFI | GGCC | 2 cut(s) | 238, 691 |
| BsiHKAI | GWGCWC | 1 cut(s) | 550 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 178, 704 |
| BsmAI | GTCTC | 1 cut(s) | 360 |
| BsnI | GGCC | 2 cut(s) | 238, 691 |
| Bsp1286I | GDGCHC | 1 cut(s) | 550 |
| Bsp143I | GATC | 7 cut(s) | 111, 343, 604, 622, 763, 790, 819 |
| BspACI | CCGC | 1 cut(s) | 95 |
| BspANI | GGCC | 2 cut(s) | 238, 691 |
| BspFNI | CGCG | 1 cut(s) | 95 |
| BspHI | TCATGA | 1 cut(s) | 511 |
| BspLI | GGNNCC | 1 cut(s) | 246 |
| BspMI | ACCTGC | 1 cut(s) | 520 |
| BspQI | GCTCTTC | 2 cut(s) | 273, 555 |
| BsrI | ACTGG | 1 cut(s) | 575 |
| BssMI | GATC | 7 cut(s) | 111, 343, 604, 622, 763, 790, 819 |
| Bst4CI | ACNGT | 1 cut(s) | 659 |
| Bst6I | CTCTTC | 2 cut(s) | 273, 555 |
| BstDEI | CTNAG | 3 cut(s) | 67, 183, 378 |
| BstFNI | CGCG | 1 cut(s) | 95 |
| BstHHI | GCGC | 1 cut(s) | 95 |
| BstKTI | GATC | 7 cut(s) | 114, 346, 607, 625, 766, 793, 822 |
| BstMAI | GTCTC | 1 cut(s) | 360 |
| BstMBI | GATC | 7 cut(s) | 111, 343, 604, 622, 763, 790, 819 |
| BstNSI | RCATGY | 1 cut(s) | 290 |
| BstUI | CGCG | 1 cut(s) | 95 |
| BsuRI | GGCC | 2 cut(s) | 238, 691 |
| BtsIMutI | CAGTG | 1 cut(s) | 165 |
| BveI | ACCTGC | 1 cut(s) | 520 |
| CciI | TCATGA | 1 cut(s) | 511 |
| CfoI | GCGC | 1 cut(s) | 95 |
| CseI | GACGC | 1 cut(s) | 14 |
| CviAII | CATG | 7 cut(s) | 287, 341, 512, 575, 704, 734, 809 |
| CviJI | RGCY | 5 cut(s) | 182, 238, 548, 592, 691 |
| CviKI_1 | RGCY | 5 cut(s) | 182, 238, 548, 592, 691 |
| DdeI | CTNAG | 3 cut(s) | 67, 183, 378 |
| DpnI | GATC | 7 cut(s) | 113, 345, 606, 624, 765, 792, 821 |
| DpnII | GATC | 7 cut(s) | 111, 343, 604, 622, 763, 790, 819 |
| EaeI | YGGCCR | 1 cut(s) | 689 |
| Eam1104I | CTCTTC | 2 cut(s) | 273, 555 |
| EarI | CTCTTC | 2 cut(s) | 273, 555 |
| Ecl136II | GAGCTC | 1 cut(s) | 548 |
| Eco147I | AGGCCT | 1 cut(s) | 238 |
| Eco24I | GRGCYC | 1 cut(s) | 550 |
| Eco32I | GATATC | 1 cut(s) | 64 |
| Eco53kI | GAGCTC | 1 cut(s) | 548 |
| Eco57I | CTGAAG | 3 cut(s) | 64, 372, 576 |
| EcoICRI | GAGCTC | 1 cut(s) | 548 |
| EcoRI | GAATTC | 1 cut(s) | 359 |
| EcoRV | GATATC | 1 cut(s) | 64 |
| EcoT38I | GRGCYC | 1 cut(s) | 550 |
| FaeI | CATG | 7 cut(s) | 290, 344, 515, 578, 707, 737, 812 |
| FatI | CATG | 7 cut(s) | 286, 340, 511, 574, 703, 733, 808 |
| FbaI | TGATCA | 2 cut(s) | 763, 790 |
| FriOI | GRGCYC | 1 cut(s) | 550 |
| FspBI | CTAG | 1 cut(s) | 141 |
| GlaI | GCGC | 1 cut(s) | 94 |
| HaeIII | GGCC | 2 cut(s) | 238, 691 |
| HgaI | GACGC | 1 cut(s) | 14 |
| HhaI | GCGC | 1 cut(s) | 95 |
| Hin1II | CATG | 7 cut(s) | 290, 344, 515, 578, 707, 737, 812 |
| Hin6I | GCGC | 1 cut(s) | 93 |
| HinP1I | GCGC | 1 cut(s) | 93 |
| HinfI | GANTC | 4 cut(s) | 402, 447, 461, 470 |
| HphI | GGTGA | 1 cut(s) | 764 |
| Hpy166II | GTNNAC | 2 cut(s) | 335, 814 |
| Hpy188I | TCNGA | 5 cut(s) | 244, 365, 466, 790, 824 |
| Hpy188III | TCNNGA | 4 cut(s) | 141, 275, 512, 554 |
| Hpy8I | GTNNAC | 2 cut(s) | 335, 814 |
| HpyAV | CCTTC | 1 cut(s) | 249 |
| HpyCH4III | ACNGT | 1 cut(s) | 659 |
| HpyCH4V | TGCA | 2 cut(s) | 389, 490 |
| HpyF3I | CTNAG | 3 cut(s) | 67, 183, 378 |
| Hsp92II | CATG | 7 cut(s) | 290, 344, 515, 578, 707, 737, 812 |
| HspAI | GCGC | 1 cut(s) | 93 |
| Ksp22I | TGATCA | 2 cut(s) | 763, 790 |
| Kzo9I | GATC | 7 cut(s) | 111, 343, 604, 622, 763, 790, 819 |
| LguI | GCTCTTC | 2 cut(s) | 273, 555 |
| LpnPI | CCDG | 4 cut(s) | 30, 515, 556, 567 |
| MaeI | CTAG | 1 cut(s) | 141 |
| MaeIII | GTNAC | 2 cut(s) | 157, 302 |
| MalI | GATC | 7 cut(s) | 113, 345, 606, 624, 765, 792, 821 |
| MboI | GATC | 7 cut(s) | 111, 343, 604, 622, 763, 790, 819 |
| MboII | GAAGA | 8 cut(s) | 71, 83, 209, 235, 290, 365, 542, 577 |
| MfeI | CAATTG | 2 cut(s) | 390, 739 |
| MhlI | GDGCHC | 1 cut(s) | 550 |
| MlsI | TGGCCA | 1 cut(s) | 691 |
| MluCI | AATT | 5 cut(s) | 267, 359, 390, 596, 739 |
| MluNI | TGGCCA | 1 cut(s) | 691 |
| MmeI | TCCRAC | 1 cut(s) | 174 |
| MnlI | CCTC | 4 cut(s) | 43, 323, 529, 641 |
| Mox20I | TGGCCA | 1 cut(s) | 691 |
| MscI | TGGCCA | 1 cut(s) | 691 |
| MseI | TTAA | 1 cut(s) | 561 |
| Msp20I | TGGCCA | 1 cut(s) | 691 |
| MunI | CAATTG | 2 cut(s) | 390, 739 |
| MvnI | CGCG | 1 cut(s) | 95 |
| NdeII | GATC | 7 cut(s) | 111, 343, 604, 622, 763, 790, 819 |
| NlaIII | CATG | 7 cut(s) | 290, 344, 515, 578, 707, 737, 812 |
| NlaIV | GGNNCC | 1 cut(s) | 246 |
| NspI | RCATGY | 1 cut(s) | 290 |
| PagI | TCATGA | 1 cut(s) | 511 |
| PaqCI | CACCTGC | 1 cut(s) | 520 |
| PceI | AGGCCT | 1 cut(s) | 238 |
| PciI | ACATGT | 1 cut(s) | 286 |
| PciSI | GCTCTTC | 2 cut(s) | 273, 555 |
| PfeI | GAWTC | 4 cut(s) | 402, 447, 461, 470 |
| PscI | ACATGT | 1 cut(s) | 286 |
| Psp124BI | GAGCTC | 1 cut(s) | 550 |
| PspN4I | GGNNCC | 1 cut(s) | 246 |
| SacI | GAGCTC | 1 cut(s) | 550 |
| SapI | GCTCTTC | 2 cut(s) | 273, 555 |
| SaqAI | TTAA | 1 cut(s) | 561 |
| Sau3AI | GATC | 7 cut(s) | 111, 343, 604, 622, 763, 790, 819 |
| SduI | GDGCHC | 1 cut(s) | 550 |
| SetI | ASST | 9 cut(s) | 54, 304, 334, 436, 442, 534, 540, 550, 652 |
| Sse9I | AATT | 5 cut(s) | 267, 359, 390, 596, 739 |
| SseBI | AGGCCT | 1 cut(s) | 238 |
| SsiI | CCGC | 1 cut(s) | 95 |
| SspI | AATATT | 1 cut(s) | 718 |
| SspMI | CTAG | 1 cut(s) | 141 |
| SstI | GAGCTC | 1 cut(s) | 550 |
| StuI | AGGCCT | 1 cut(s) | 238 |
| TaaI | ACNGT | 1 cut(s) | 659 |
| TaqI | TCGA | 2 cut(s) | 480, 818 |
| TasI | AATT | 5 cut(s) | 267, 359, 390, 596, 739 |
| TfiI | GAWTC | 4 cut(s) | 402, 447, 461, 470 |
| Tru1I | TTAA | 1 cut(s) | 561 |
| Tru9I | TTAA | 1 cut(s) | 561 |
| TscAI | CASTG | 1 cut(s) | 172 |
| TspDTI | ATGAA | 5 cut(s) | 72, 372, 439, 500, 528 |
| TspGWI | ACGGA | 1 cut(s) | 687 |
| TspRI | CASTG | 1 cut(s) | 172 |
| XapI | RAATTY | 2 cut(s) | 267, 359 |
| XbaI | TCTAGA | 1 cut(s) | 140 |
| XceI | RCATGY | 1 cut(s) | 290 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 212 |
| XspI | CTAG | 1 cut(s) | 141 |