RNA-binding protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g02790 FvH4_1g18000 |
| malus_domestica | MD02G1189700.v1.1 |
| prunus_persica | Prupe.6G216700_v2.0.a1 |
| pyrus_communis | pycom02g15380 |
| rosa_chinensis | RchiOBHm_Chr2g0087881 RchiOBHm_Chr2g0108481 |
| rosa_laevigata | RLG00000015909 RLG00000017672 |
| rosa_multiflora | Rmu_co8200454.1_g000001 Rmu_sc0002372.1_g000049 Rmu_sc0008385.1_g000021 Rmu_sc0014136.1_g000014 |
| rosa_roxburghii | Rroxscaffold_2G00135100 |
| rosa_rugosa | Rorug01G0479100 Rorug02G0153700 Rorug02G0155900 |
| rosa_samantha | Rh2AG033900 Rh2AG202400 Rh2BG033100 Rh2BG215400 Rh2CG033800 Rh2CG206600 Rh2DG033500 Rh2DG209700 |
| rosa_wichuraiana | Rw2G002660 Rw2G016180 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 523 |
| Acc36I | ACCTGC | 1 cut(s) | 523 |
| AcoI | YGGCCR | 1 cut(s) | 692 |
| AcsI | RAATTY | 2 cut(s) | 270, 362 |
| AcuI | CTGAAG | 3 cut(s) | 64, 375, 579 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 178, 707 |
| AflIII | ACRYGT | 1 cut(s) | 289 |
| AgsI | TTSAA | 3 cut(s) | 296, 599, 677 |
| AluBI | AGCT | 1 cut(s) | 551 |
| AluI | AGCT | 1 cut(s) | 551 |
| Alw21I | GWGCWC | 1 cut(s) | 553 |
| Alw26I | GTCTC | 1 cut(s) | 363 |
| AoxI | GGCC | 2 cut(s) | 239, 692 |
| ApoI | RAATTY | 2 cut(s) | 270, 362 |
| AsuHPI | GGTGA | 1 cut(s) | 767 |
| BalI | TGGCCA | 1 cut(s) | 694 |
| BanII | GRGCYC | 1 cut(s) | 553 |
| Bbv12I | GWGCWC | 1 cut(s) | 553 |
| BccI | CCATC | 3 cut(s) | 221, 395, 585 |
| BclI | TGATCA | 2 cut(s) | 766, 793 |
| BcoDI | GTCTC | 1 cut(s) | 363 |
| BfaI | CTAG | 1 cut(s) | 141 |
| BfmI | CTRYAG | 1 cut(s) | 640 |
| BfuAI | ACCTGC | 1 cut(s) | 523 |
| BmiI | GGNNCC | 1 cut(s) | 249 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 178, 707 |
| Bse1I | ACTGG | 1 cut(s) | 578 |
| BseGI | GGATG | 1 cut(s) | 309 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 178, 707 |
| BseNI | ACTGG | 1 cut(s) | 578 |
| BshFI | GGCC | 2 cut(s) | 241, 694 |
| BsiHKAI | GWGCWC | 1 cut(s) | 553 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 178, 707 |
| BsmAI | GTCTC | 1 cut(s) | 363 |
| BsnI | GGCC | 2 cut(s) | 241, 694 |
| Bsp1286I | GDGCHC | 1 cut(s) | 553 |
| Bsp143I | GATC | 6 cut(s) | 111, 346, 607, 625, 766, 793 |
| BspANI | GGCC | 2 cut(s) | 241, 694 |
| BspHI | TCATGA | 1 cut(s) | 514 |
| BspLI | GGNNCC | 1 cut(s) | 249 |
| BspMI | ACCTGC | 1 cut(s) | 523 |
| BspQI | GCTCTTC | 2 cut(s) | 276, 558 |
| BsrI | ACTGG | 1 cut(s) | 578 |
| BssMI | GATC | 6 cut(s) | 111, 346, 607, 625, 766, 793 |
| Bst4CI | ACNGT | 1 cut(s) | 662 |
| Bst6I | CTCTTC | 3 cut(s) | 96, 276, 558 |
| BstDEI | CTNAG | 2 cut(s) | 183, 381 |
| BstF5I | GGATG | 1 cut(s) | 309 |
| BstKTI | GATC | 6 cut(s) | 114, 349, 610, 628, 769, 796 |
| BstMAI | GTCTC | 1 cut(s) | 363 |
| BstMBI | GATC | 6 cut(s) | 111, 346, 607, 625, 766, 793 |
| BstNSI | RCATGY | 1 cut(s) | 293 |
| BstSFI | CTRYAG | 1 cut(s) | 640 |
| BsuRI | GGCC | 2 cut(s) | 241, 694 |
| BtsCI | GGATG | 1 cut(s) | 309 |
| BtsIMutI | CAGTG | 1 cut(s) | 165 |
| BveI | ACCTGC | 1 cut(s) | 523 |
| CciI | TCATGA | 1 cut(s) | 514 |
| CseI | GACGC | 1 cut(s) | 14 |
| CviAII | CATG | 6 cut(s) | 290, 344, 515, 578, 707, 737 |
| CviJI | RGCY | 6 cut(s) | 182, 207, 241, 551, 595, 694 |
| CviKI_1 | RGCY | 6 cut(s) | 182, 207, 241, 551, 595, 694 |
| DdeI | CTNAG | 2 cut(s) | 183, 381 |
| DpnI | GATC | 6 cut(s) | 113, 348, 609, 627, 768, 795 |
| DpnII | GATC | 6 cut(s) | 111, 346, 607, 625, 766, 793 |
| EaeI | YGGCCR | 1 cut(s) | 692 |
| Eam1104I | CTCTTC | 3 cut(s) | 96, 276, 558 |
| EarI | CTCTTC | 3 cut(s) | 96, 276, 558 |
| Ecl136II | GAGCTC | 1 cut(s) | 551 |
| Eco147I | AGGCCT | 1 cut(s) | 241 |
| Eco24I | GRGCYC | 1 cut(s) | 553 |
| Eco32I | GATATC | 1 cut(s) | 64 |
| Eco53kI | GAGCTC | 1 cut(s) | 551 |
| Eco57I | CTGAAG | 3 cut(s) | 64, 375, 579 |
| EcoICRI | GAGCTC | 1 cut(s) | 551 |
| EcoRI | GAATTC | 1 cut(s) | 362 |
| EcoRV | GATATC | 1 cut(s) | 64 |
| EcoT38I | GRGCYC | 1 cut(s) | 553 |
| FaeI | CATG | 6 cut(s) | 293, 347, 518, 581, 710, 740 |
| FatI | CATG | 6 cut(s) | 289, 343, 514, 577, 706, 736 |
| FbaI | TGATCA | 2 cut(s) | 766, 793 |
| FokI | GGATG | 1 cut(s) | 296 |
| FriOI | GRGCYC | 1 cut(s) | 553 |
| FspBI | CTAG | 1 cut(s) | 141 |
| HaeIII | GGCC | 2 cut(s) | 241, 694 |
| HgaI | GACGC | 1 cut(s) | 14 |
| Hin1II | CATG | 6 cut(s) | 293, 347, 518, 581, 710, 740 |
| HincII | GTYRAC | 1 cut(s) | 137 |
| HindII | GTYRAC | 1 cut(s) | 137 |
| HinfI | GANTC | 4 cut(s) | 405, 450, 464, 473 |
| HphI | GGTGA | 1 cut(s) | 767 |
| Hpy166II | GTNNAC | 3 cut(s) | 137, 338, 817 |
| Hpy188I | TCNGA | 5 cut(s) | 247, 368, 449, 469, 793 |
| Hpy188III | TCNNGA | 3 cut(s) | 278, 515, 557 |
| Hpy8I | GTNNAC | 3 cut(s) | 137, 338, 817 |
| HpyAV | CCTTC | 2 cut(s) | 172, 252 |
| HpyCH4III | ACNGT | 1 cut(s) | 662 |
| HpyCH4V | TGCA | 2 cut(s) | 392, 493 |
| HpyF3I | CTNAG | 2 cut(s) | 183, 381 |
| Hsp92II | CATG | 6 cut(s) | 293, 347, 518, 581, 710, 740 |
| Ksp22I | TGATCA | 2 cut(s) | 766, 793 |
| Kzo9I | GATC | 6 cut(s) | 111, 346, 607, 625, 766, 793 |
| LguI | GCTCTTC | 2 cut(s) | 276, 558 |
| LpnPI | CCDG | 4 cut(s) | 30, 518, 559, 570 |
| MaeI | CTAG | 1 cut(s) | 141 |
| MaeIII | GTNAC | 2 cut(s) | 157, 305 |
| MalI | GATC | 6 cut(s) | 113, 348, 609, 627, 768, 795 |
| MboI | GATC | 6 cut(s) | 111, 346, 607, 625, 766, 793 |
| MfeI | CAATTG | 1 cut(s) | 393 |
| MhlI | GDGCHC | 1 cut(s) | 553 |
| MlsI | TGGCCA | 1 cut(s) | 694 |
| MluCI | AATT | 5 cut(s) | 270, 362, 393, 599, 742 |
| MluNI | TGGCCA | 1 cut(s) | 694 |
| MnlI | CCTC | 4 cut(s) | 43, 326, 532, 644 |
| Mox20I | TGGCCA | 1 cut(s) | 694 |
| MscI | TGGCCA | 1 cut(s) | 694 |
| MseI | TTAA | 1 cut(s) | 564 |
| Msp20I | TGGCCA | 1 cut(s) | 694 |
| MunI | CAATTG | 1 cut(s) | 393 |
| NdeII | GATC | 6 cut(s) | 111, 346, 607, 625, 766, 793 |
| NlaIII | CATG | 6 cut(s) | 293, 347, 518, 581, 710, 740 |
| NlaIV | GGNNCC | 1 cut(s) | 249 |
| NspI | RCATGY | 1 cut(s) | 293 |
| PagI | TCATGA | 1 cut(s) | 514 |
| PaqCI | CACCTGC | 1 cut(s) | 523 |
| PceI | AGGCCT | 1 cut(s) | 241 |
| PciI | ACATGT | 1 cut(s) | 289 |
| PciSI | GCTCTTC | 2 cut(s) | 276, 558 |
| PfeI | GAWTC | 4 cut(s) | 405, 450, 464, 473 |
| PscI | ACATGT | 1 cut(s) | 289 |
| Psp124BI | GAGCTC | 1 cut(s) | 553 |
| PspN4I | GGNNCC | 1 cut(s) | 249 |
| SacI | GAGCTC | 1 cut(s) | 553 |
| SapI | GCTCTTC | 2 cut(s) | 276, 558 |
| SaqAI | TTAA | 1 cut(s) | 564 |
| Sau3AI | GATC | 6 cut(s) | 111, 346, 607, 625, 766, 793 |
| SduI | GDGCHC | 1 cut(s) | 553 |
| SfcI | CTRYAG | 1 cut(s) | 640 |
| Sse9I | AATT | 5 cut(s) | 270, 362, 393, 599, 742 |
| SseBI | AGGCCT | 1 cut(s) | 241 |
| SspI | AATATT | 1 cut(s) | 721 |
| SspMI | CTAG | 1 cut(s) | 141 |
| SstI | GAGCTC | 1 cut(s) | 553 |
| StuI | AGGCCT | 1 cut(s) | 241 |
| TaaI | ACNGT | 1 cut(s) | 662 |
| TaqI | TCGA | 1 cut(s) | 483 |
| TasI | AATT | 5 cut(s) | 270, 362, 393, 599, 742 |
| TfiI | GAWTC | 4 cut(s) | 405, 450, 464, 473 |
| Tru1I | TTAA | 1 cut(s) | 564 |
| Tru9I | TTAA | 1 cut(s) | 564 |
| TscAI | CASTG | 1 cut(s) | 172 |
| TspDTI | ATGAA | 5 cut(s) | 72, 375, 442, 503, 531 |
| TspGWI | ACGGA | 1 cut(s) | 690 |
| TspRI | CASTG | 1 cut(s) | 172 |
| XapI | RAATTY | 2 cut(s) | 270, 362 |
| XceI | RCATGY | 1 cut(s) | 293 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 215 |
| XspI | CTAG | 1 cut(s) | 141 |