CDPK-related kinase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0385591 RchiOBHm_Chr6g0297401 |
| rosa_laevigata | RLG00000009216 RLG00000019703 RLG00000023657 |
| rosa_roxburghii | Rroxscaffold_3G00255730 Rroxscaffold_7G00207230 |
| rosa_rugosa | Rorug05G0461100 |
| rosa_samantha | Rh2AG534100 Rh2CG518000 Rh5AG514500 Rh5BG327400 Rh5CG180700 Rh5DG338600 Rh6BG220300 |
| rosa_wichuraiana | Rw7G037470 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 104 |
| AciI | CCGC | 2 cut(s) | 87, 90 |
| AcsI | RAATTY | 1 cut(s) | 308 |
| AgsI | TTSAA | 2 cut(s) | 74, 305 |
| AluBI | AGCT | 2 cut(s) | 124, 233 |
| AluI | AGCT | 2 cut(s) | 124, 233 |
| AoxI | GGCC | 2 cut(s) | 168, 345 |
| ApeKI | GCWGC | 2 cut(s) | 317, 320 |
| ApoI | RAATTY | 1 cut(s) | 308 |
| AspLEI | GCGC | 1 cut(s) | 105 |
| AspS9I | GGNCC | 2 cut(s) | 113, 346 |
| AvaII | GGWCC | 1 cut(s) | 113 |
| BbvI | GCAGC | 2 cut(s) | 304, 307 |
| BccI | CCATC | 3 cut(s) | 133, 232, 351 |
| BisI | GCNGC | 3 cut(s) | 88, 318, 321 |
| BlsI | GCNGC | 3 cut(s) | 89, 319, 322 |
| Bme18I | GGWCC | 1 cut(s) | 113 |
| BmgT120I | GGNCC | 2 cut(s) | 113, 346 |
| BmiI | GGNNCC | 2 cut(s) | 114, 276 |
| BmsI | GCATC | 2 cut(s) | 343, 380 |
| Bsa29I | ATCGAT | 1 cut(s) | 214 |
| Bse3DI | GCAATG | 2 cut(s) | 38, 276 |
| BseCI | ATCGAT | 1 cut(s) | 214 |
| BseGI | GGATG | 1 cut(s) | 362 |
| BseMI | GCAATG | 2 cut(s) | 38, 276 |
| BseMII | CTCAG | 1 cut(s) | 116 |
| BseXI | GCAGC | 2 cut(s) | 304, 307 |
| BshFI | GGCC | 2 cut(s) | 170, 347 |
| BshVI | ATCGAT | 1 cut(s) | 214 |
| BsnI | GGCC | 2 cut(s) | 170, 347 |
| Bsp143I | GATC | 1 cut(s) | 211 |
| BspACI | CCGC | 2 cut(s) | 87, 90 |
| BspANI | GGCC | 2 cut(s) | 170, 347 |
| BspCNI | CTCAG | 1 cut(s) | 117 |
| BspDI | ATCGAT | 1 cut(s) | 214 |
| BspLI | GGNNCC | 2 cut(s) | 114, 276 |
| BspQI | GCTCTTC | 1 cut(s) | 150 |
| BsrDI | GCAATG | 2 cut(s) | 38, 276 |
| BssMI | GATC | 1 cut(s) | 211 |
| Bst4CI | ACNGT | 1 cut(s) | 197 |
| Bst6I | CTCTTC | 2 cut(s) | 88, 150 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 377 |
| BstC8I | GCNNGC | 1 cut(s) | 332 |
| BstDEI | CTNAG | 1 cut(s) | 125 |
| BstF5I | GGATG | 1 cut(s) | 362 |
| BstHHI | GCGC | 1 cut(s) | 105 |
| BstKTI | GATC | 1 cut(s) | 214 |
| BstMBI | GATC | 1 cut(s) | 211 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 87, 377 |
| BstV1I | GCAGC | 2 cut(s) | 304, 307 |
| Bsu15I | ATCGAT | 1 cut(s) | 214 |
| BsuRI | GGCC | 2 cut(s) | 170, 347 |
| BsuTUI | ATCGAT | 1 cut(s) | 214 |
| BtsCI | GGATG | 1 cut(s) | 362 |
| Cac8I | GCNNGC | 1 cut(s) | 332 |
| CfoI | GCGC | 1 cut(s) | 105 |
| Cfr13I | GGNCC | 2 cut(s) | 113, 346 |
| ClaI | ATCGAT | 1 cut(s) | 214 |
| CviAII | CATG | 1 cut(s) | 178 |
| CviJI | RGCY | 6 cut(s) | 81, 124, 143, 170, 233, 347 |
| CviKI_1 | RGCY | 6 cut(s) | 81, 124, 143, 170, 233, 347 |
| DdeI | CTNAG | 1 cut(s) | 125 |
| DpnI | GATC | 1 cut(s) | 213 |
| DpnII | GATC | 1 cut(s) | 211 |
| Eam1104I | CTCTTC | 2 cut(s) | 88, 150 |
| EarI | CTCTTC | 2 cut(s) | 88, 150 |
| EciI | GGCGGA | 1 cut(s) | 105 |
| Eco47I | GGWCC | 1 cut(s) | 113 |
| EcoO109I | RGGNCCY | 1 cut(s) | 346 |
| FaeI | CATG | 1 cut(s) | 181 |
| FaiI | YATR | 7 cut(s) | 15, 17, 151, 179, 236, 286, 288 |
| FatI | CATG | 1 cut(s) | 177 |
| Fnu4HI | GCNGC | 3 cut(s) | 88, 318, 321 |
| FokI | GGATG | 1 cut(s) | 369 |
| Fsp4HI | GCNGC | 3 cut(s) | 88, 318, 321 |
| FspI | TGCGCA | 1 cut(s) | 104 |
| GlaI | GCGC | 1 cut(s) | 104 |
| GluI | GCNGC | 3 cut(s) | 88, 318, 321 |
| HaeIII | GGCC | 2 cut(s) | 170, 347 |
| HhaI | GCGC | 1 cut(s) | 105 |
| Hin1II | CATG | 1 cut(s) | 181 |
| Hin6I | GCGC | 1 cut(s) | 103 |
| HinP1I | GCGC | 1 cut(s) | 103 |
| HpyAV | CCTTC | 3 cut(s) | 148, 155, 347 |
| HpyCH4III | ACNGT | 1 cut(s) | 197 |
| HpyCH4V | TGCA | 5 cut(s) | 43, 177, 269, 284, 323 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 87, 377 |
| HpyF3I | CTNAG | 1 cut(s) | 125 |
| Hsp92II | CATG | 1 cut(s) | 181 |
| HspAI | GCGC | 1 cut(s) | 103 |
| Kzo9I | GATC | 1 cut(s) | 211 |
| LguI | GCTCTTC | 1 cut(s) | 150 |
| LmnI | GCTCC | 1 cut(s) | 361 |
| LpnPI | CCDG | 1 cut(s) | 152 |
| Lsp1109I | GCAGC | 2 cut(s) | 304, 307 |
| LweI | GCATC | 2 cut(s) | 343, 380 |
| MalI | GATC | 1 cut(s) | 213 |
| MboI | GATC | 1 cut(s) | 211 |
| MboII | GAAGA | 6 cut(s) | 105, 137, 170, 179, 182, 317 |
| MfeI | CAATTG | 1 cut(s) | 338 |
| MluCI | AATT | 4 cut(s) | 69, 308, 324, 338 |
| MnlI | CCTC | 5 cut(s) | 89, 124, 235, 337, 359 |
| MseI | TTAA | 1 cut(s) | 385 |
| MunI | CAATTG | 1 cut(s) | 338 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 87, 377 |
| NdeII | GATC | 1 cut(s) | 211 |
| NlaIII | CATG | 1 cut(s) | 181 |
| NlaIV | GGNNCC | 2 cut(s) | 114, 276 |
| NsbI | TGCGCA | 1 cut(s) | 104 |
| PciSI | GCTCTTC | 1 cut(s) | 150 |
| PkrI | GCNGC | 3 cut(s) | 89, 319, 322 |
| PspN4I | GGNNCC | 2 cut(s) | 114, 276 |
| PspPI | GGNCC | 2 cut(s) | 113, 346 |
| SapI | GCTCTTC | 1 cut(s) | 150 |
| SaqAI | TTAA | 1 cut(s) | 385 |
| SatI | GCNGC | 3 cut(s) | 88, 318, 321 |
| Sau3AI | GATC | 1 cut(s) | 211 |
| Sau96I | GGNCC | 2 cut(s) | 113, 346 |
| SetI | ASST | 4 cut(s) | 126, 135, 166, 235 |
| SfaNI | GCATC | 2 cut(s) | 343, 380 |
| SinI | GGWCC | 1 cut(s) | 113 |
| Sse9I | AATT | 4 cut(s) | 69, 308, 324, 338 |
| SsiI | CCGC | 2 cut(s) | 87, 90 |
| TaaI | ACNGT | 1 cut(s) | 197 |
| TaqI | TCGA | 2 cut(s) | 214, 351 |
| TasI | AATT | 4 cut(s) | 69, 308, 324, 338 |
| TauI | GCSGC | 1 cut(s) | 90 |
| Tru1I | TTAA | 1 cut(s) | 385 |
| Tru9I | TTAA | 1 cut(s) | 385 |
| TseI | GCWGC | 2 cut(s) | 317, 320 |
| VpaK11BI | GGWCC | 1 cut(s) | 113 |
| XapI | RAATTY | 1 cut(s) | 308 |