Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0007593

Physical Location & Seq

Genomic Coordinates Forward (+)

69300939 .. 69306544

Gene Structure 5606 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000020840

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2316 bp

ATGAGGCTACCAATACCTGGCCTTTGCCTCCTCTCTTTTCTTCTCTCTTCTCTAGTACTCCACAGACCCACCTTTGCTATCAAAAAGTCATATGTGGTGTACTTTGGAGCTCACTCACACCCTCCAAACTTTTCAGAACTTGAACTAACCCGAGTGAGAGAGAATCACTGTGAGTTTCTTGGATCATTCTTGGGCAGCCATGAAGTTGCGAAGGACTCCATCTTTTACTCATACACAAGGCACATCAATGGCTTTGCTGCCACATTAGAAGAAGAAGATGCAGCTCAGATAGCAAAGCATCCAAAGGTAATCTCAGTTTTCTTGAACAAGGGAAGAAAGTTACACACAACTAGATCCTGGGATTTCTTGGGACTTGAGCATAATGGTGTTACTCCCCCAAATTCAATTTGGGAGAAGGCAAGATATGGTGAAGATACAATTATAGCAAACCTTGATACTGGGGCATGGCCAGAATCCAAGAGCTTTAGTGATGAAGGGTATGGACCGATTCCATCTAAGTGGAAAGGAATCTGCCAAAATGAGGCAGATTCTGAATTTCACTGCAACAGGAAGCTAATTGGAGCGAGATACTTCAACAAAGGCTTTGCTGCAGTGGTCGGACCCCTCAACTCCTCCTTCCAATCACCGCGCGATGAGGAAGGCCACGGCTCTCACACCTTGTCAACAGCAGGTGGCAACTTTGTGACCGGGGCAAGTGTGTTTGGCTTTGGAAATGGAACAGCAAAAGGTGGATCACCAAAAGCTAGGGTTGCAGCTTACAAGGTATGTTGGCCTCCAGTGAATGGAAGTGAGTGCTTTGAAGCAGATATATTAGCTGCATTCGACATGGCGATACATGATGGTGTTGATGTGCTGTCTGTATCACTTGGTGGAGATGCCACTGCATTTTTCAACGATAGTGTTGCAATTGGATCTTTTCATGCTGTTAAGCATGGCATTGTGGTGGTTTGCTCAGCTGGGAATTCTGGTCCAGATGATGCTACTGTGTCCAATGTAGCGGTGTGGCAGATCACAGTAGGTGCTAGTACTATGGATAGGGAGTTCCCTACTTATATCACTCTTGGCAACTGGAAACACTTCAAGGGACAAAGCTTATCAGCTGTGGCCTTGCCAAGCAAGAGGTTCTATCCACTTATAAGTGCTGCAGATGCTACAGCAGCTAATACATCTGTTCAAGAAGCTCTGCTGTGCAAGGCTGGAATGCTTGATCCAGAAAAGGTTAAGGGAAAGATCTTGGCCTGCCTTAGAGGGGACAATGCAAGAGTGGACAAGGGTGAGCAAGCCTTACTTGCTGGTGCTGTGGGGATGATTCTTGCTAACAGTGAAGTTAACGGGAATGAAATTATCTCCGATCCACATGTCCTCCCTGCTTCACATATCAATTTCACCGATGGCTCCCTTGTCTTTGCTTACATCAACTCAACCAAGTCTCCTAGAGCTTACATAAAACGTCCAACTACGCAATTGGGTACAAAACCAGCCCCATTCATGGCTGCATTTTCATCAAAGGGACCTAGCACCATTACACCAGATATCCTTAAGCCTGATATCACTGCACCAGGAGTGAGTGTTATAGCAGCCTACACTGAAGCAGAAGGGCCAACAAATCAAGAGTTTGACAGAAGGCGAATTCCATTCAACTCGGTGTCAGGCACATCTATGTCTTGTCCACACATTGCAGGCGTTGTTGGCCTTCTAAAAACCCTCTATCCTCACTGGAGTCCTGCAGCTATTAAATCTGCAATTATGACCACAGCAAAAACACAAGATAATAGCAGGGAACCAGTGCTCAATGCTTCAAACTCTGAGGCAACACCATTTAGTTATGGAGCAGGATATGTTAATCCAAATAGTGCTATGGATCCTGGGTTGGTGTACGATTTAGACACTGATGATTACTTGAATTTGCTATGCGCATTGGGATACAATGAAACACAAATCGAAACATTCTCACAGCAGCCCTACAAATGCCCCAACCCTGCTATTAGTCTCGCAAACCTCAACTACCCCTCAATCACTGTTCCTAAACTCTCTGGCTCCCTTGTTGTGACGAGAACACTGAAAAATGTTGGAGAACCGGGAACTTATAAGGCACGCATCATAAACCCAGATGGTATATTGGTTTCTGTTGAGCCTAAGAGCTTGGAGTTCAAGAAGGTTGGTGAGGAAAAGAGCTTCAGTGTGGTCCTGGAGGCTAAAGATGGCAAAGCAGCAAAAAACTACGTATTTGGAAAGTTGATATGGTCAGATGGTAAGCACAATGTAAGGAGTCCCATTGTGATAAAGGCGGCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0006508 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009791 GO:0010015 GO:0010033 GO:0010101 GO:0010102 GO:0016787 GO:0017171 GO:0019538 GO:0022622 GO:0032501 GO:0032502 GO:0042221 GO:0043170 GO:0044238 GO:0048364 GO:0048527 GO:0048528 GO:0048731 GO:0048856 GO:0050896 GO:0070011 GO:0071704 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:0140096 GO:1901564 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 PA Peptidase_S8

Protein Analysis

772

Amino Acids

82.83

Weight (kDa)

7.06

Isoelectric Point (pI)

29.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	30 - 115	5.9e-16	Peptidase inhibitor I9
Peptidase_S8	PF00082	144 - 619	1.4e-38	Subtilase family
PA	PF02225	401 - 473	3.6e-11	PA domain
fn3_6	PF17766	673 - 768	4.2e-31	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007593)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G04160
fragaria_vesca	FvH4_6g40300
malus_domestica	MD09G1132200.v1.1 MD09G1132600.v1.1 MD17G1120300.v1.1
prunus_persica	Prupe.3G147300_v2.0.a1 Prupe.3G193800_v2.0.a1
pyrus_communis	pycom09g05410 pycom17g11090
rosa_chinensis	RchiOBHm_Chr2g0155491
rosa_laevigata	RLG00000020840
rosa_multiflora	Rmu_sc0003439.1_g000012
rosa_roxburghii	Rroxscaffold_2G00093670
rosa_rugosa	Rorug02G0447200 Rorug02G0447200
rosa_samantha	Rh2AG513600 Rh2AG513700 Rh2BG524400 Rh2BG524500 Rh2BG524600 Rh2CG498500 Rh2CG498600 Rh2DG533600
rosa_wichuraiana	Rw2G042220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1157, 2109
AarI	CACCTGC	1 cut(s)	680
Acc16I	TGCGCA	1 cut(s)	1936
Acc36I	ACCTGC	1 cut(s)	680
AccB7I	CCANNNNNTGG	2 cut(s)	17, 803
AccII	CGCG	2 cut(s)	649, 651
AciI	CCGC	3 cut(s)	647, 1019, 2309
AclWI	GGATC	8 cut(s)	190, 348, 760, 940, 1223, 1367, 1877, 1890
AcoI	YGGCCR	1 cut(s)	467
AcsI	RAATTY	5 cut(s)	400, 554, 982, 1650, 1924
AcuI	CTGAAG	2 cut(s)	1629, 2182
AdeI	CACNNNGTG	1 cut(s)	890
AfaI	GTAC	5 cut(s)	57, 101, 1048, 1492, 1898
AfiI	CCNNNNNNNGG	5 cut(s)	17, 541, 803, 1270, 1510
AflII	CTTAAG	1 cut(s)	1559
AflIII	ACRYGT	1 cut(s)	1378
AjnI	CCWGG	5 cut(s)	16, 356, 1579, 1885, 2208
AloI	GAACNNNNNNTCC	2 cut(s)	1046, 1078
Alw21I	GWGCWC	2 cut(s)	112, 1812
Alw26I	GTCTC	2 cut(s)	1455, 2015
AlwI	GGATC	8 cut(s)	190, 348, 760, 940, 1223, 1367, 1877, 1890
AlwNI	CAGNNNCTG	1 cut(s)	551
Ama87I	CYCGRG	1 cut(s)	150
AoxI	GGCC	9 cut(s)	19, 467, 661, 791, 1125, 1257, 1619, 1711, 2310
ApoI	RAATTY	5 cut(s)	400, 554, 982, 1650, 1924
Asp700I	GAANNNNTTC	1 cut(s)	1097
AspLEI	GCGC	2 cut(s)	651, 1937
AspS9I	GGNCC	6 cut(s)	503, 620, 989, 1532, 1619, 2206
AsuC2I	CCSGG	2 cut(s)	709, 2100
AsuHPI	GGTGA	6 cut(s)	440, 636, 747, 1307, 1399, 2195
AvaI	CYCGRG	1 cut(s)	150
AvaII	GGWCC	5 cut(s)	503, 620, 989, 1532, 2206
BalI	TGGCCA	1 cut(s)	469
BamHI	GGATCC	1 cut(s)	1882
BanII	GRGCYC	1 cut(s)	112
Bbv12I	GWGCWC	2 cut(s)	112, 1812
BccI	CCATC	7 cut(s)	227, 520, 854, 1406, 2126, 2216, 2264
BceAI	ACGGC	1 cut(s)	682
BcgI	CGANNNNNNTGC	2 cut(s)	905, 939
BciT130I	CCWGG	5 cut(s)	18, 358, 1581, 1887, 2210
BciVI	GTATCC	1 cut(s)	1937
BcnI	CCSGG	2 cut(s)	709, 2100
BcoDI	GTCTC	2 cut(s)	1455, 2015
BfaI	CTAG	7 cut(s)	53, 351, 765, 1044, 1455, 1536, 2314
BfmI	CTRYAG	4 cut(s)	609, 1164, 1173, 1746
BfrI	CTTAAG	1 cut(s)	1559
BfuAI	ACCTGC	1 cut(s)	680
BfuI	GTATCC	1 cut(s)	1937
BglII	AGATCT	1 cut(s)	1251
BlpI	GCTNAGC	1 cut(s)	973
BmcAI	AGTACT	2 cut(s)	57, 1048
Bme1390I	CCNGG	7 cut(s)	18, 358, 709, 1581, 1887, 2100, 2210
Bme18I	GGWCC	5 cut(s)	503, 620, 989, 1532, 2206
BmeT110I	CYCGRG	1 cut(s)	150
BmgT120I	GGNCC	6 cut(s)	503, 620, 989, 1532, 1619, 2206
BmiI	GGNNCC	6 cut(s)	622, 1417, 1533, 1803, 1884, 2059
BmrFI	CCNGG	7 cut(s)	18, 358, 709, 1581, 1887, 2100, 2210
BmrI	ACTGGG	1 cut(s)	468
BmsI	GCATC	6 cut(s)	268, 307, 886, 988, 1159, 2127
BmuI	ACTGGG	1 cut(s)	468
BpmI	CTGGAG	3 cut(s)	780, 1759, 2231
Bpu1102I	GCTNAGC	1 cut(s)	973
BpuEI	CTTGAG	1 cut(s)	395
BpuMI	CCSGG	2 cut(s)	709, 2100
BsaAI	YACGTR	1 cut(s)	2245
BsaJI	CCNNGG	4 cut(s)	357, 664, 708, 1886
BsaXI	ACNNNNNCTCC	6 cut(s)	1368, 1398, 1435, 1465, 1575, 1605
Bsc4I	CCNNNNNNNGG	5 cut(s)	17, 541, 803, 1270, 1510
Bse1I	ACTGG	5 cut(s)	463, 797, 1094, 1742, 1805
Bse3DI	GCAATG	1 cut(s)	1695
BseBI	CCWGG	5 cut(s)	18, 358, 1581, 1887, 2210
BseDI	CCNNGG	4 cut(s)	357, 664, 708, 1886
BseGI	GGATG	2 cut(s)	298, 1332
BseLI	CCNNNNNNNGG	5 cut(s)	17, 541, 803, 1270, 1510
BseMI	GCAATG	1 cut(s)	1695
BseMII	CTCAG	4 cut(s)	299, 327, 987, 1818
BseNI	ACTGG	5 cut(s)	463, 797, 1094, 1742, 1805
BseRI	GAGGAG	2 cut(s)	20, 622
BseYI	CCCAGC	1 cut(s)	977
BsgI	GTGCAG	1 cut(s)	1560
Bsh1236I	CGCG	2 cut(s)	649, 651
BshFI	GGCC	9 cut(s)	21, 469, 663, 793, 1127, 1259, 1621, 1713, 2312
BsiHKAI	GWGCWC	2 cut(s)	112, 1812
BsiHKCI	CYCGRG	1 cut(s)	150
BsiSI	CCGG	2 cut(s)	708, 2099
BslFI	GGGAC	5 cut(s)	384, 1119, 1286, 1545, 2277
BslI	CCNNNNNNNGG	5 cut(s)	17, 541, 803, 1270, 1510
BsmAI	GTCTC	2 cut(s)	1455, 2015
BsmFI	GGGAC	5 cut(s)	384, 1119, 1286, 1545, 2277
BsmI	GAATGC	2 cut(s)	839, 1227
BsnI	GGCC	9 cut(s)	21, 469, 663, 793, 1127, 1259, 1621, 1713, 2312
BsoBI	CYCGRG	1 cut(s)	150
Bsp1286I	GDGCHC	2 cut(s)	112, 1812
Bsp143I	GATC	9 cut(s)	182, 353, 752, 932, 1029, 1228, 1251, 1372, 1882
Bsp1720I	GCTNAGC	1 cut(s)	973
BspACI	CCGC	3 cut(s)	647, 1019, 2309
BspANI	GGCC	9 cut(s)	21, 469, 663, 793, 1127, 1259, 1621, 1713, 2312
BspCNI	CTCAG	4 cut(s)	298, 326, 986, 1819
BspFNI	CGCG	2 cut(s)	649, 651
BspLI	GGNNCC	6 cut(s)	622, 1417, 1533, 1803, 1884, 2059
BspMAI	CTGCAG	3 cut(s)	613, 1168, 1750
BspMI	ACCTGC	1 cut(s)	680
BspPI	GGATC	8 cut(s)	190, 348, 760, 940, 1223, 1367, 1877, 1890
BspTI	CTTAAG	1 cut(s)	1559
BsrDI	GCAATG	1 cut(s)	1695
BsrI	ACTGG	5 cut(s)	463, 797, 1094, 1742, 1805
BssECI	CCNNGG	4 cut(s)	357, 664, 708, 1886
BssMI	GATC	9 cut(s)	182, 353, 752, 932, 1029, 1228, 1251, 1372, 1882
Bst2UI	CCWGG	5 cut(s)	18, 358, 1581, 1887, 2210
Bst4CI	ACNGT	5 cut(s)	170, 1006, 1036, 1343, 2041
Bst6I	CTCTTC	1 cut(s)	52
BstAFI	CTTAAG	1 cut(s)	1559
BstBAI	YACGTR	1 cut(s)	2245
BstC8I	GCNNGC	4 cut(s)	1261, 1302, 1702, 2116
BstDEI	CTNAG	7 cut(s)	285, 313, 516, 973, 1265, 1827, 2157
BstDSI	CCRYGG	1 cut(s)	664
BstF5I	GGATG	2 cut(s)	298, 1332
BstFNI	CGCG	2 cut(s)	649, 651
BstHHI	GCGC	2 cut(s)	651, 1937
BstKTI	GATC	9 cut(s)	185, 356, 755, 935, 1032, 1231, 1254, 1375, 1885
BstMAI	GTCTC	2 cut(s)	1455, 2015
BstMBI	GATC	9 cut(s)	182, 353, 752, 932, 1029, 1228, 1251, 1372, 1882
BstMWI	GCNNNNNNNGC	6 cut(s)	290, 770, 1169, 1178, 1310, 1710
BstNI	CCWGG	5 cut(s)	18, 358, 1581, 1887, 2210
BstNSI	RCATGY	1 cut(s)	1382
BstSCI	CCNGG	7 cut(s)	16, 356, 707, 1579, 1885, 2098, 2208
BstSFI	CTRYAG	4 cut(s)	609, 1164, 1173, 1746
BstSNI	TACGTA	1 cut(s)	2245
BstUI	CGCG	2 cut(s)	649, 651
BstX2I	RGATCY	4 cut(s)	353, 932, 1251, 1882
BstXI	CCANNNNNNTGG	1 cut(s)	519
BstYI	RGATCY	4 cut(s)	353, 932, 1251, 1882
BsuI	GTATCC	1 cut(s)	1937
BsuRI	GGCC	9 cut(s)	21, 469, 663, 793, 1127, 1259, 1621, 1713, 2312
BtgI	CCRYGG	1 cut(s)	664
BtgZI	GCGATG	1 cut(s)	666
BtsCI	GGATG	2 cut(s)	298, 1332
BtsI	GCAGTG	4 cut(s)	559, 618, 900, 1572
BveI	ACCTGC	1 cut(s)	680
Cac8I	GCNNGC	4 cut(s)	1261, 1302, 1702, 2116
CaiI	CAGNNNCTG	1 cut(s)	551
CfoI	GCGC	2 cut(s)	651, 1937
Cfr13I	GGNCC	6 cut(s)	503, 620, 989, 1532, 1619, 2206
Csp6I	GTAC	5 cut(s)	56, 100, 1047, 1491, 1897
CviAII	CATG	8 cut(s)	200, 465, 847, 857, 941, 953, 1379, 1510
CviQI	GTAC	5 cut(s)	56, 100, 1047, 1491, 1897
DdeI	CTNAG	7 cut(s)	285, 313, 516, 973, 1265, 1827, 2157
DpnI	GATC	9 cut(s)	184, 355, 754, 934, 1031, 1230, 1253, 1374, 1884
DpnII	GATC	9 cut(s)	182, 353, 752, 932, 1029, 1228, 1251, 1372, 1882
DraIII	CACNNNGTG	1 cut(s)	890
EaeI	YGGCCR	1 cut(s)	467
Eam1104I	CTCTTC	1 cut(s)	52
EarI	CTCTTC	1 cut(s)	52
Ecl136II	GAGCTC	1 cut(s)	110
Eco105I	TACGTA	1 cut(s)	2245
Eco24I	GRGCYC	1 cut(s)	112
Eco32I	GATATC	2 cut(s)	1555, 1570
Eco47I	GGWCC	5 cut(s)	503, 620, 989, 1532, 2206
Eco53kI	GAGCTC	1 cut(s)	110
Eco57I	CTGAAG	2 cut(s)	1629, 2182
Eco88I	CYCGRG	1 cut(s)	150
EcoICRI	GAGCTC	1 cut(s)	110
EcoO109I	RGGNCCY	1 cut(s)	1532
EcoRI	GAATTC	2 cut(s)	982, 1650
EcoRII	CCWGG	5 cut(s)	16, 356, 1579, 1885, 2208
EcoRV	GATATC	2 cut(s)	1555, 1570
EcoT38I	GRGCYC	1 cut(s)	112
FaeI	CATG	8 cut(s)	203, 468, 850, 860, 944, 956, 1382, 1513
FalI	AAGNNNNNCTT	2 cut(s)	1293, 1325
FaqI	GGGAC	5 cut(s)	384, 1119, 1286, 1545, 2277
FatI	CATG	8 cut(s)	199, 464, 846, 856, 940, 952, 1378, 1509
FauNDI	CATATG	1 cut(s)	91
FokI	GGATG	2 cut(s)	285, 1339
FriOI	GRGCYC	1 cut(s)	112
FspAI	RTGCGCAY	1 cut(s)	1936
FspBI	CTAG	7 cut(s)	53, 351, 765, 1044, 1455, 1536, 2314
FspI	TGCGCA	1 cut(s)	1936
GlaI	GCGC	2 cut(s)	650, 1936
GsaI	CCCAGC	1 cut(s)	981
GsuI	CTGGAG	3 cut(s)	780, 1759, 2231
HaeIII	GGCC	9 cut(s)	21, 469, 663, 793, 1127, 1259, 1621, 1713, 2312
HapII	CCGG	2 cut(s)	708, 2099
HhaI	GCGC	2 cut(s)	651, 1937
Hin1II	CATG	8 cut(s)	203, 468, 850, 860, 944, 956, 1382, 1513
Hin6I	GCGC	2 cut(s)	649, 1935
HinP1I	GCGC	2 cut(s)	649, 1935
HincII	GTYRAC	2 cut(s)	684, 1351
HindII	GTYRAC	2 cut(s)	684, 1351
HindIII	AAGCTT	1 cut(s)	1111
HinfI	GANTC	9 cut(s)	163, 215, 473, 508, 528, 548, 1330, 1741, 2290
HpaI	GTTAAC	1 cut(s)	1351
HpaII	CCGG	2 cut(s)	708, 2099
HphI	GGTGA	6 cut(s)	440, 636, 747, 1307, 1399, 2195
Hpy166II	GTNNAC	6 cut(s)	100, 684, 1288, 1351, 1691, 1897
Hpy188I	TCNGA	7 cut(s)	136, 288, 553, 620, 1372, 1828, 2269
Hpy188III	TCNNGA	6 cut(s)	322, 992, 1196, 1232, 1631, 2173
Hpy8I	GTNNAC	6 cut(s)	100, 684, 1288, 1351, 1691, 1897
HpyAV	CCTTC	9 cut(s)	205, 409, 488, 646, 653, 1610, 1638, 1724, 2170
HpyCH4III	ACNGT	5 cut(s)	170, 1006, 1036, 1343, 2041
HpyCH4IV	ACGT	2 cut(s)	1471, 2244
HpyF10VI	GCNNNNNNNGC	6 cut(s)	290, 770, 1169, 1178, 1310, 1710
HpyF3I	CTNAG	7 cut(s)	285, 313, 516, 973, 1265, 1827, 2157
HpySE526I	ACGT	2 cut(s)	1471, 2244
Hsp92II	CATG	8 cut(s)	203, 468, 850, 860, 944, 956, 1382, 1513
HspAI	GCGC	2 cut(s)	649, 1935
KspAI	GTTAAC	1 cut(s)	1351
Kzo9I	GATC	9 cut(s)	182, 353, 752, 932, 1029, 1228, 1251, 1372, 1882
LmnI	GCTCC	5 cut(s)	107, 581, 1421, 1850, 2063
LweI	GCATC	6 cut(s)	268, 307, 886, 988, 1159, 2127
MaeI	CTAG	7 cut(s)	53, 351, 765, 1044, 1455, 1536, 2314
MaeII	ACGT	2 cut(s)	1471, 2244
MaeIII	GTNAC	4 cut(s)	339, 388, 703, 2068
MalI	GATC	9 cut(s)	184, 355, 754, 934, 1031, 1230, 1253, 1374, 1884
MboI	GATC	9 cut(s)	182, 353, 752, 932, 1029, 1228, 1251, 1372, 1882
MboII	GAAGA	7 cut(s)	32, 39, 281, 284, 287, 345, 443
MfeI	CAATTG	2 cut(s)	927, 1484
MflI	RGATCY	4 cut(s)	353, 932, 1251, 1882
MhlI	GDGCHC	2 cut(s)	112, 1812
MlsI	TGGCCA	1 cut(s)	469
MluNI	TGGCCA	1 cut(s)	469
MlyI	GAGTC	3 cut(s)	209, 1750, 2299
MmeI	TCCRAC	3 cut(s)	598, 1499, 2071
Mox20I	TGGCCA	1 cut(s)	469
MroXI	GAANNNNTTC	1 cut(s)	1097
MscI	TGGCCA	1 cut(s)	469
MseI	TTAA	6 cut(s)	948, 1242, 1350, 1560, 1755, 1863
MslI	CAYNNNNRTG	6 cut(s)	246, 384, 517, 861, 962, 1679
Msp20I	TGGCCA	1 cut(s)	469
MspA1I	CMGCKG	2 cut(s)	977, 1121
MspCI	CTTAAG	1 cut(s)	1559
MspI	CCGG	2 cut(s)	708, 2099
MspR9I	CCNGG	7 cut(s)	18, 358, 709, 1581, 1887, 2100, 2210
MunI	CAATTG	2 cut(s)	927, 1484
Mva1269I	GAATGC	2 cut(s)	839, 1227
MvaI	CCWGG	5 cut(s)	18, 358, 1581, 1887, 2210
MvnI	CGCG	2 cut(s)	649, 651
MwoI	GCNNNNNNNGC	6 cut(s)	290, 770, 1169, 1178, 1310, 1710
NciI	CCSGG	2 cut(s)	709, 2100
NdeI	CATATG	1 cut(s)	91
NdeII	GATC	9 cut(s)	182, 353, 752, 932, 1029, 1228, 1251, 1372, 1882
NlaIII	CATG	8 cut(s)	203, 468, 850, 860, 944, 956, 1382, 1513
NlaIV	GGNNCC	6 cut(s)	622, 1417, 1533, 1803, 1884, 2059
NmuCI	GTSAC	2 cut(s)	703, 2068
NsbI	TGCGCA	1 cut(s)	1936
NspI	RCATGY	1 cut(s)	1382
PaqCI	CACCTGC	1 cut(s)	680
PciI	ACATGT	1 cut(s)	1378
PctI	GAATGC	2 cut(s)	839, 1227
PdmI	GAANNNNTTC	1 cut(s)	1097
PfeI	GAWTC	6 cut(s)	163, 473, 508, 528, 548, 1330
PflMI	CCANNNNNTGG	2 cut(s)	17, 803
PfoI	TCCNGGA	1 cut(s)	2208
PleI	GAGTC	3 cut(s)	209, 1749, 2298
PpsI	GAGTC	3 cut(s)	209, 1749, 2298
Ppu21I	YACGTR	1 cut(s)	2245
PpuMI	RGGWCCY	1 cut(s)	1532
PscI	ACATGT	1 cut(s)	1378
PsiI	TTATAA	2 cut(s)	1157, 2109
Psp124BI	GAGCTC	1 cut(s)	112
Psp5II	RGGWCCY	1 cut(s)	1532
Psp6I	CCWGG	5 cut(s)	16, 356, 1579, 1885, 2208
PspFI	CCCAGC	1 cut(s)	977
PspGI	CCWGG	5 cut(s)	16, 356, 1579, 1885, 2208
PspN4I	GGNNCC	6 cut(s)	622, 1417, 1533, 1803, 1884, 2059
PspPI	GGNCC	6 cut(s)	503, 620, 989, 1532, 1619, 2206
PspPPI	RGGWCCY	1 cut(s)	1532
PstI	CTGCAG	3 cut(s)	613, 1168, 1750
PstNI	CAGNNNCTG	1 cut(s)	551
PsuI	RGATCY	4 cut(s)	353, 932, 1251, 1882
PvuII	CAGCTG	2 cut(s)	977, 1121
RsaI	GTAC	5 cut(s)	57, 101, 1048, 1492, 1898
RsaNI	GTAC	5 cut(s)	56, 100, 1047, 1491, 1897
RseI	CAYNNNNRTG	6 cut(s)	246, 384, 517, 861, 962, 1679
SacI	GAGCTC	1 cut(s)	112
SaqAI	TTAA	6 cut(s)	948, 1242, 1350, 1560, 1755, 1863
Sau3AI	GATC	9 cut(s)	182, 353, 752, 932, 1029, 1228, 1251, 1372, 1882
Sau96I	GGNCC	6 cut(s)	503, 620, 989, 1532, 1619, 2206
ScaI	AGTACT	2 cut(s)	57, 1048
SchI	GAGTC	3 cut(s)	209, 1750, 2299
ScrFI	CCNGG	7 cut(s)	18, 358, 709, 1581, 1887, 2100, 2210
SduI	GDGCHC	2 cut(s)	112, 1812
SfaNI	GCATC	6 cut(s)	268, 307, 886, 988, 1159, 2127
SfcI	CTRYAG	4 cut(s)	609, 1164, 1173, 1746
SinI	GGWCC	5 cut(s)	503, 620, 989, 1532, 2206
SmiMI	CAYNNNNRTG	6 cut(s)	246, 384, 517, 861, 962, 1679
SmlI	CTYRAG	2 cut(s)	374, 1559
SmoI	CTYRAG	2 cut(s)	374, 1559
SnaBI	TACGTA	1 cut(s)	2245
SsiI	CCGC	3 cut(s)	647, 1019, 2309
SspMI	CTAG	7 cut(s)	53, 351, 765, 1044, 1455, 1536, 2314
SstI	GAGCTC	1 cut(s)	112
StyD4I	CCNGG	7 cut(s)	16, 356, 707, 1579, 1885, 2098, 2208
TaaI	ACNGT	5 cut(s)	170, 1006, 1036, 1343, 2041
TaiI	ACGT	2 cut(s)	1474, 2247
TaqI	TCGA	2 cut(s)	843, 1962
TaqII	GACCGA	1 cut(s)	520
TatI	WGTACW	3 cut(s)	55, 99, 1046
TauI	GCSGC	1 cut(s)	2312
TfiI	GAWTC	6 cut(s)	163, 473, 508, 528, 548, 1330
Tru1I	TTAA	6 cut(s)	948, 1242, 1350, 1560, 1755, 1863
Tru9I	TTAA	6 cut(s)	948, 1242, 1350, 1560, 1755, 1863
TseFI	GTSAC	2 cut(s)	703, 2068
Tsp45I	GTSAC	2 cut(s)	703, 2068
TspDTI	ATGAA	7 cut(s)	216, 507, 929, 1374, 1498, 1512, 1965
Van91I	CCANNNNNTGG	2 cut(s)	17, 803
Vha464I	CTTAAG	1 cut(s)	1559
VpaK11BI	GGWCC	5 cut(s)	503, 620, 989, 1532, 2206
XapI	RAATTY	5 cut(s)	400, 554, 982, 1650, 1924
XceI	RCATGY	1 cut(s)	1382
XcmI	CCANNNNNNNNNTGG	1 cut(s)	405
XmnI	GAANNNNTTC	1 cut(s)	1097
XspI	CTAG	7 cut(s)	53, 351, 765, 1044, 1455, 1536, 2314
ZrmI	AGTACT	2 cut(s)	57, 1048

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.