RLG00000021049

Exostosin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0007378
Physical Location & Seq
Reverse (-)
71410922 .. 71411837
916 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000021049

Sequence Viewer

Length: 396 bp
ATGTTCTCCTTACGAGGATCTCTCATCACTCTCGCCGTCTTCACCGTACTTTCCCTTGCCTACTTCTCCCTCAACTTCTCCGTCTCCTCTCCTCCCCCTCCCTCCGTCACCGCGACCATTGACCTTCCCGTCGTCAGGCAGGAGGAGACTTCCAACTCCAATCTGTCACCCGAGGAAGAGGAAGAGTTTTTGGACATTTACCACTCACCGGAGATGCCGAGGAAGCTCACCTGGAAATATTCTAGTGAGGGATATTTCTTTCAGAATATTAGAAAGGGAAGGTTTCAGACCGAGGATCCGGGTCAGGCTCAGCTCTTCTTCATCCCTATCTCCTGCCACAAGATGCGAGGCAAGATATTGTTGGTTTATGACGATTGTGCAGGGTACTTCATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Exostosin

Protein Analysis

132

Amino Acids

14.97

Weight (kDa)

5.1

Isoelectric Point (pI)

65.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 128
AccII CGCG 1 cut(s) 113
AciI CCGC 1 cut(s) 111
AclWI GGATC 3 cut(s) 25, 290, 303
AfaI GTAC 2 cut(s) 48, 386
AfiI CCNNNNNNNGG 2 cut(s) 135, 208
AjnI CCWGG 1 cut(s) 230
AluBI AGCT 2 cut(s) 226, 313
AluI AGCT 2 cut(s) 226, 313
Alw26I GTCTC 2 cut(s) 88, 140
AlwI GGATC 3 cut(s) 25, 290, 303
Ama87I CYCGRG 1 cut(s) 170
AsuC2I CCSGG 1 cut(s) 300
AsuHPI GGTGA 5 cut(s) 34, 100, 159, 198, 220
AvaI CYCGRG 1 cut(s) 170
BamHI GGATCC 1 cut(s) 295
BbsI GAAGAC 1 cut(s) 31
BceAI ACGGC 1 cut(s) 20
BciT130I CCWGG 1 cut(s) 232
BcnI CCSGG 1 cut(s) 300
BcoDI GTCTC 2 cut(s) 88, 140
BfaI CTAG 1 cut(s) 243
BlpI GCTNAGC 1 cut(s) 309
Bme1390I CCNGG 2 cut(s) 232, 300
BmeT110I CYCGRG 1 cut(s) 170
BmiI GGNNCC 1 cut(s) 297
BmrFI CCNGG 2 cut(s) 232, 300
BmsI GCATC 2 cut(s) 204, 333
BpiI GAAGAC 1 cut(s) 31
BplI GAGNNNNNCTC 1 cut(s) 38
Bpu1102I GCTNAGC 1 cut(s) 309
BpuMI CCSGG 1 cut(s) 300
BsaJI CCNNGG 3 cut(s) 171, 218, 291
BsaWI WCCGGW 1 cut(s) 208
Bsc4I CCNNNNNNNGG 2 cut(s) 135, 208
BseBI CCWGG 1 cut(s) 232
BseDI CCNNGG 3 cut(s) 171, 218, 291
BseGI GGATG 1 cut(s) 321
BseLI CCNNNNNNNGG 2 cut(s) 135, 208
BseMII CTCAG 1 cut(s) 323
BseRI GAGGAG 3 cut(s) 76, 81, 158
Bsh1236I CGCG 1 cut(s) 113
BsiHKCI CYCGRG 1 cut(s) 170
BsiSI CCGG 2 cut(s) 209, 299
BslI CCNNNNNNNGG 2 cut(s) 135, 208
BsmAI GTCTC 2 cut(s) 88, 140
BsmBI CGTCTC 1 cut(s) 88
BsoBI CYCGRG 1 cut(s) 170
Bsp143I GATC 2 cut(s) 17, 295
Bsp1720I GCTNAGC 1 cut(s) 309
BspACI CCGC 1 cut(s) 111
BspCNI CTCAG 1 cut(s) 322
BspFNI CGCG 1 cut(s) 113
BspLI GGNNCC 1 cut(s) 297
BspPI GGATC 3 cut(s) 25, 290, 303
BspQI GCTCTTC 1 cut(s) 320
BssECI CCNNGG 3 cut(s) 171, 218, 291
BssMI GATC 2 cut(s) 17, 295
Bst2UI CCWGG 1 cut(s) 232
Bst4CI ACNGT 1 cut(s) 46
Bst6I CTCTTC 3 cut(s) 171, 177, 320
BstDEI CTNAG 1 cut(s) 309
BstF5I GGATG 1 cut(s) 321
BstFNI CGCG 1 cut(s) 113
BstKTI GATC 2 cut(s) 20, 298
BstMAI GTCTC 2 cut(s) 88, 140
BstMBI GATC 2 cut(s) 17, 295
BstMWI GCNNNNNNNGC 1 cut(s) 223
BstNI CCWGG 1 cut(s) 232
BstSCI CCNGG 2 cut(s) 230, 298
BstUI CGCG 1 cut(s) 113
BstV2I GAAGAC 1 cut(s) 31
BstX2I RGATCY 2 cut(s) 17, 295
BstYI RGATCY 2 cut(s) 17, 295
BtsCI GGATG 1 cut(s) 321
Csp6I GTAC 2 cut(s) 47, 385
CviJI RGCY 3 cut(s) 226, 308, 313
CviKI_1 RGCY 3 cut(s) 226, 308, 313
CviQI GTAC 2 cut(s) 47, 385
DdeI CTNAG 1 cut(s) 309
DpnI GATC 2 cut(s) 19, 297
DpnII GATC 2 cut(s) 17, 295
DrdI GACNNNNNNGTC 1 cut(s) 128
DseDI GACNNNNNNGTC 1 cut(s) 128
Eam1104I CTCTTC 3 cut(s) 171, 177, 320
EarI CTCTTC 3 cut(s) 171, 177, 320
Eco88I CYCGRG 1 cut(s) 170
EcoRII CCWGG 1 cut(s) 230
Esp3I CGTCTC 1 cut(s) 88
FaiI YATR 3 cut(s) 369, 392, 394
FauNDI CATATG 1 cut(s) 392
FokI GGATG 1 cut(s) 308
FspBI CTAG 1 cut(s) 243
HapII CCGG 2 cut(s) 209, 299
HpaII CCGG 2 cut(s) 209, 299
HphI GGTGA 5 cut(s) 34, 100, 159, 198, 220
Hpy188I TCNGA 2 cut(s) 264, 288
Hpy99I CGWCG 1 cut(s) 134
HpyAV CCTTC 2 cut(s) 134, 273
HpyCH4III ACNGT 1 cut(s) 46
HpyCH4V TGCA 1 cut(s) 380
HpyF10VI GCNNNNNNNGC 1 cut(s) 223
HpyF3I CTNAG 1 cut(s) 309
Kzo9I GATC 2 cut(s) 17, 295
LguI GCTCTTC 1 cut(s) 320
LpnPI CCDG 9 cut(s) 121, 125, 217, 222, 244, 290, 312, 346, 366
LweI GCATC 2 cut(s) 204, 333
MaeI CTAG 1 cut(s) 243
MaeIII GTNAC 2 cut(s) 106, 165
MalI GATC 2 cut(s) 19, 297
MboI GATC 2 cut(s) 17, 295
MboII GAAGA 5 cut(s) 31, 188, 194, 307, 310
MflI RGATCY 2 cut(s) 17, 295
MmeI TCCRAC 1 cut(s) 177
MspI CCGG 2 cut(s) 209, 299
MspR9I CCNGG 2 cut(s) 232, 300
MvaI CCWGG 1 cut(s) 232
MvnI CGCG 1 cut(s) 113
MwoI GCNNNNNNNGC 1 cut(s) 223
NciI CCSGG 1 cut(s) 300
NdeI CATATG 1 cut(s) 392
NdeII GATC 2 cut(s) 17, 295
NlaIV GGNNCC 1 cut(s) 297
NmeAIII GCCGAG 1 cut(s) 243
NmuCI GTSAC 2 cut(s) 106, 165
PciSI GCTCTTC 1 cut(s) 320
Psp6I CCWGG 1 cut(s) 230
PspGI CCWGG 1 cut(s) 230
PspN4I GGNNCC 1 cut(s) 297
PsuI RGATCY 2 cut(s) 17, 295
RsaI GTAC 2 cut(s) 48, 386
RsaNI GTAC 2 cut(s) 47, 385
SapI GCTCTTC 1 cut(s) 320
Sau3AI GATC 2 cut(s) 17, 295
ScrFI CCNGG 2 cut(s) 232, 300
SetI ASST 5 cut(s) 126, 228, 233, 284, 315
SfaNI GCATC 2 cut(s) 204, 333
SsiI CCGC 1 cut(s) 111
SspI AATATT 2 cut(s) 239, 268
SspMI CTAG 1 cut(s) 243
StyD4I CCNGG 2 cut(s) 230, 298
TaaI ACNGT 1 cut(s) 46
TaqII GACCGA 1 cut(s) 305
TseFI GTSAC 2 cut(s) 106, 165
Tsp45I GTSAC 2 cut(s) 106, 165
TspDTI ATGAA 2 cut(s) 310, 379
TspGWI ACGGA 2 cut(s) 70, 94
XspI CTAG 1 cut(s) 243
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.