Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0004656

Physical Location & Seq

Genomic Coordinates Reverse (-)

75541075 .. 75544042

Gene Structure 2968 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000021448

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1614 bp

ATGGGACAGCAGCGCTGTCTTGTGGCAGGCATTGTGGCCGGCCCTGTACTGGATTGCATTGAAGTACGTCACGATTTGGCTCTTTGTAGGCTCAATCATAAATCATGGACCATCATTAAGGTTGCAGAGGTGGAGGATCACGAGTTATTATTCTGCGACATAGAAATAATTGATCGGAAATTATATGCGGCAACGAAGAACATGCTTATGGTGTTTCACATCAAAGACACTAAGGATGGCCGTTGCCTTAGCTATAAGCTTGTAGAGACGGTTACGCTTCAGTACAATAAGCCAGTTAATTGGCCTTATAATCACTATGGACTAGATAAAGATTGGTACAAGCCCTTTTCAAAAAAAGACCGCGATAAAGACAGATACATGAAGCTTTTTGAAGATGGCCCTTACCTAGTAAAAGATGTTACATCAAAGGAGTTGTTCATGATTTTTCGGGACGTTACCTTGTTGCATTCGTTGCCCATTACGTACTGTACTGAAGGATTTCGGGTTCTCAAGCTGGAGAACTGTATTGCTAATAGTTCTAACTGGGTAGAGGTTTCTGACCTTGGTGACCGGATGTTGTTCCTAAGCAAGTTCAGCAACCAACTCATCTATGCCGGCAATGGCGTTATAATGTTAATTCGCATGTGTGTGAGCAGTACACTAGAAAACGGTTCGAATTCATGCTATTCCTCGTCTTCAATCCTTCGATTCGACTGCGTTCTCGTCTCGGGTTCGGATCCGTTCGTGACCGAATTGGAGATCGAAGGTGACGACGGCGACGACCTCGGGTCAAATTCTAATTTGGGGCTAGGGTTTGGGGCCGAGTCAAATTCCCAGGGCTCAGGCTCTGAATTCGGAGACTTTCTAGCTCCGCAAGGGCTTCGGGTTGTTGGGTTGGAGTCCGATTCGGATTCGGATAACGATGAATTCGAAAGCAATCGGGTCAGCGAAGGTATCCAGTCGATTTGGGACAGTATTTTCATGGAGGAGCAGAGAAATGCGTATGAGAATTCTGAGTGGGAAGAAGTGGAGCAAAGCATCGAGCAGCCGGATAGTTCAATTGAGGGTGGAGGAGGAGGAGGAGGAGTGGAAGAGCTATCAGTGGCCTCTGGATTCTCTACTGAAGAAGAAGAGGTCCCCGAAGGAGCGGCGAGAAGCATTGAGTGGGAGATTCTATTGACAGTGAACAATTTCAGGAGGAATGTGGATGACGTGGAGCTTGATATAGAGACTGCTGAGTACATTGAAGCGATTTTCGGGCAGTTTGTGGAGAATGCTAATGCCTGTAAAGGCAGCCCTCCGGCGGCTTTGCGGGCTGTGGAGGACCTTCCTTTTGTGGAGTTTTCGGTGGAGGAGCTGAGCAAGGAGGAGGTGGTTTGTGCTGTTTGTAAAGATAATATAGTGTTGGAGGATAAGGTGAGGAGCTTGCCGTGTTGTCATTATTACCATCAGGACTGCATCGTGCCGTGGTTGAGCATAAGGAATACATGCCCCGTGTGTCGGTATGAGTTGCCCACTGATGATCTTGATTATGAAAGGAGCAAGTGCGAGAGGTCTGCTCGTGGCCTGTCGTGGGAATCACAGGTTAGGCTTGATTTTGAACGGTTTGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0006464 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009653 GO:0009791 GO:0009826 GO:0009888 GO:0009987 GO:0010026 GO:0010154 GO:0016043 GO:0016049 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0022412 GO:0022414 GO:0030154 GO:0032446 GO:0032501 GO:0032502 GO:0032504 GO:0032989 GO:0036211 GO:0040007 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0048316 GO:0048468 GO:0048589 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0060560 GO:0061458 GO:0070647 GO:0071704 GO:0071840 GO:0090376 GO:0090378 GO:0090558 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RING_2

Protein Analysis

538

Amino Acids

60.6

Weight (kDa)

4.46

Isoelectric Point (pI)

51.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_KIB1-4	PF03478	23 - 198	2.9e-11	KIB1-4 beta-propeller
zf-RING_2	PF13639	460 - 501	2.9e-11	Ring finger domain
zf-C3HC4_2	PF13923	460 - 500	2.9e-07	Zinc finger, C3HC4 type (RING finger)
zf-RING_11	PF17123	460 - 487	1.8e-06	RING-like zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004656)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02340 AT3G02340 AT5G15820
fragaria_vesca	FvH4_6g46010 FvH4_6g46010 FvH4_6g46010
malus_domestica	MD09G1078100.v1.1 MD17G1068100.v1.1 MD17G1068500.v1.1
prunus_persica	Prupe.3G246300_v2.0.a1
pyrus_communis	pycom09g00500 pycom17g06870 pycom17g06880
rosa_chinensis	RchiOBHm_Chr2g0164241
rosa_laevigata	RLG00000021448
rosa_multiflora	Rmu_sc0000854.1_g000011 Rmu_sc0001427.1_g000007 Rmu_sc0004956.1_g000001 Rmu_sc0007154.1_g000003 Rmu_sc0008593.1_g000002 Rmu_sc0018459.1_g000001 Rmu_sc0041118.1_g000003
rosa_roxburghii	Rroxscaffold_2G00086690 Rroxscaffold_6G00413980
rosa_rugosa	Rorug02G0507400 Rorug07G0301000
rosa_samantha	Rh2AG575600 Rh2BG586400 Rh2CG557200 Rh2DG596000
rosa_wichuraiana	Rw2G047650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	309, 629
AccBSI	CCGCTC	1 cut(s)	1148
AccII	CGCG	1 cut(s)	363
AciI	CCGC	6 cut(s)	188, 361, 872, 1148, 1304, 1312
AclWI	GGATC	3 cut(s)	144, 731, 744
AcoI	YGGCCR	2 cut(s)	36, 238
AcsI	RAATTY	6 cut(s)	676, 793, 829, 851, 926, 1009
AcuI	CTGAAG	3 cut(s)	263, 513, 1143
AfaI	GTAC	8 cut(s)	48, 66, 284, 338, 485, 490, 658, 1241
AfeI	AGCGCT	1 cut(s)	14
AfiI	CCNNNNNNNGG	4 cut(s)	49, 1303, 1500, 1573
AgsI	TTSAA	7 cut(s)	62, 351, 392, 699, 1059, 1247, 1601
AhdI	GACNNNNNGTC	1 cut(s)	787
AjiI	CACGTC	1 cut(s)	1213
AjnI	CCWGG	1 cut(s)	834
AloI	GAACNNNNNNTCC	2 cut(s)	489, 521
AluBI	AGCT	9 cut(s)	252, 259, 385, 514, 869, 1096, 1219, 1357, 1425
AluI	AGCT	9 cut(s)	252, 259, 385, 514, 869, 1096, 1219, 1357, 1425
Alw26I	GTCTC	4 cut(s)	260, 730, 852, 1223
AlwI	GGATC	3 cut(s)	144, 731, 744
AlwNI	CAGNNNCTG	1 cut(s)	848
Ama87I	CYCGRG	2 cut(s)	727, 785
Aor51HI	AGCGCT	1 cut(s)	14
AoxI	GGCC	8 cut(s)	36, 40, 238, 302, 397, 819, 1104, 1564
ApeKI	GCWGC	3 cut(s)	10, 1045, 1293
ApoI	RAATTY	6 cut(s)	676, 793, 829, 851, 926, 1009
ArsI	GACNNNNNNTTYG	2 cut(s)	1316, 1348
Asp700I	GAANNNNTTC	2 cut(s)	498, 1190
AspLEI	GCGC	1 cut(s)	15
AspS9I	GGNCC	6 cut(s)	41, 108, 398, 819, 1135, 1324
AsuHPI	GGTGA	3 cut(s)	578, 779, 1429
AsuII	TTCGAA	2 cut(s)	674, 930
AvaI	CYCGRG	2 cut(s)	727, 785
AvaII	GGWCC	3 cut(s)	108, 1135, 1324
BamHI	GGATCC	1 cut(s)	736
BanII	GRGCYC	1 cut(s)	842
BauI	CACGAG	2 cut(s)	140, 1560
BbsI	GAAGAC	1 cut(s)	687
BbvI	GCAGC	3 cut(s)	22, 1057, 1305
BccI	CCATC	4 cut(s)	119, 230, 389, 1455
BceAI	ACGGC	4 cut(s)	225, 790, 1414, 1450
BcgI	CGANNNNNNTGC	8 cut(s)	184, 218, 696, 730, 863, 897, 1538, 1572
BciT130I	CCWGG	1 cut(s)	836
BciVI	GTATCC	1 cut(s)	965
BcoDI	GTCTC	4 cut(s)	260, 730, 852, 1223
BfaI	CTAG	5 cut(s)	323, 407, 662, 809, 866
BfoI	RGCGCY	1 cut(s)	16
BfuI	GTATCC	1 cut(s)	965
BisI	GCNGC	6 cut(s)	11, 189, 1046, 1149, 1294, 1305
BlpI	GCTNAGC	1 cut(s)	1358
BlsI	GCNGC	6 cut(s)	12, 190, 1047, 1150, 1295, 1306
Bme1390I	CCNGG	1 cut(s)	836
Bme18I	GGWCC	3 cut(s)	108, 1135, 1324
BmeRI	GACNNNNNGTC	1 cut(s)	787
BmeT110I	CYCGRG	2 cut(s)	727, 785
BmgBI	CACGTC	1 cut(s)	1213
BmgT120I	GGNCC	6 cut(s)	41, 108, 398, 819, 1135, 1324
BmiI	GGNNCC	3 cut(s)	738, 820, 1137
BmrFI	CCNGG	1 cut(s)	836
BmrI	ACTGGG	1 cut(s)	553
BmsI	GCATC	2 cut(s)	1047, 1467
BmuI	ACTGGG	1 cut(s)	553
BpiI	GAAGAC	1 cut(s)	687
BplI	GAGNNNNNCTC	2 cut(s)	1543, 1575
BpmI	CTGGAG	1 cut(s)	536
Bpu10I	CCTNAGC	3 cut(s)	248, 584, 841
Bpu1102I	GCTNAGC	1 cut(s)	1358
Bpu14I	TTCGAA	2 cut(s)	674, 930
BpuEI	CTTGAG	1 cut(s)	494
BsaAI	YACGTR	1 cut(s)	483
BsaJI	CCNNGG	5 cut(s)	562, 784, 834, 835, 1466
BsaWI	WCCGGW	1 cut(s)	570
BsaXI	ACNNNNNCTCC	2 cut(s)	1071, 1101
Bsc4I	CCNNNNNNNGG	4 cut(s)	49, 1303, 1500, 1573
Bse118I	RCCGGY	2 cut(s)	38, 614
Bse1I	ACTGG	4 cut(s)	54, 293, 548, 958
Bse3DI	GCAATG	1 cut(s)	625
BseBI	CCWGG	1 cut(s)	836
BseDI	CCNNGG	5 cut(s)	562, 784, 834, 835, 1466
BseGI	GGATG	3 cut(s)	241, 579, 1213
BseLI	CCNNNNNNNGG	4 cut(s)	49, 1303, 1500, 1573
BseMI	GCAATG	1 cut(s)	625
BseMII	CTCAG	4 cut(s)	855, 1005, 1227, 1349
BseNI	ACTGG	4 cut(s)	54, 293, 548, 958
BseRI	GAGGAG	9 cut(s)	1001, 1086, 1089, 1092, 1095, 1098, 1367, 1382, 1435
BseXI	GCAGC	3 cut(s)	22, 1057, 1305
Bsh1236I	CGCG	1 cut(s)	363
BshFI	GGCC	8 cut(s)	38, 42, 240, 304, 399, 821, 1106, 1566
BsiHKCI	CYCGRG	2 cut(s)	727, 785
BsiSI	CCGG	5 cut(s)	39, 571, 615, 1049, 1301
BslFI	GGGAC	4 cut(s)	18, 464, 983, 1121
BslI	CCNNNNNNNGG	4 cut(s)	49, 1303, 1500, 1573
BsmAI	GTCTC	4 cut(s)	260, 730, 852, 1223
BsmBI	CGTCTC	2 cut(s)	260, 730
BsmFI	GGGAC	4 cut(s)	18, 464, 983, 1121
BsmI	GAATGC	2 cut(s)	466, 1279
BsnI	GGCC	8 cut(s)	38, 42, 240, 304, 399, 821, 1106, 1566
BsoBI	CYCGRG	2 cut(s)	727, 785
Bsp119I	TTCGAA	2 cut(s)	674, 930
Bsp1286I	GDGCHC	1 cut(s)	842
Bsp143I	GATC	5 cut(s)	136, 172, 736, 759, 1522
Bsp1720I	GCTNAGC	1 cut(s)	1358
BspACI	CCGC	6 cut(s)	188, 361, 872, 1148, 1304, 1312
BspANI	GGCC	8 cut(s)	38, 42, 240, 304, 399, 821, 1106, 1566
BspCNI	CTCAG	4 cut(s)	854, 1006, 1228, 1350
BspFNI	CGCG	1 cut(s)	363
BspHI	TCATGA	1 cut(s)	438
BspLI	GGNNCC	3 cut(s)	738, 820, 1137
BspPI	GGATC	3 cut(s)	144, 731, 744
BspQI	GCTCTTC	1 cut(s)	1086
BspT104I	TTCGAA	2 cut(s)	674, 930
BsrBI	CCGCTC	1 cut(s)	1148
BsrDI	GCAATG	1 cut(s)	625
BsrFI	RCCGGY	2 cut(s)	38, 614
BsrI	ACTGG	4 cut(s)	54, 293, 548, 958
BssAI	RCCGGY	2 cut(s)	38, 614
BssECI	CCNNGG	5 cut(s)	562, 784, 834, 835, 1466
BssMI	GATC	5 cut(s)	136, 172, 736, 759, 1522
BssSI	CACGAG	2 cut(s)	140, 1560
BssT1I	CCWWGG	1 cut(s)	562
Bst2BI	CACGAG	2 cut(s)	140, 1560
Bst2UI	CCWGG	1 cut(s)	836
Bst4CI	ACNGT	7 cut(s)	271, 488, 524, 671, 974, 1183, 1605
Bst6I	CTCTTC	2 cut(s)	1086, 1125
BstAPI	GCANNNNNTGC	1 cut(s)	472
BstBAI	YACGTR	1 cut(s)	483
BstBI	TTCGAA	2 cut(s)	674, 930
BstC8I	GCNNGC	5 cut(s)	28, 40, 616, 1314, 1427
BstDEI	CTNAG	7 cut(s)	231, 248, 584, 841, 1014, 1236, 1358
BstDSI	CCRYGG	1 cut(s)	1466
BstEII	GGTNACC	1 cut(s)	566
BstF5I	GGATG	3 cut(s)	241, 579, 1213
BstFNI	CGCG	1 cut(s)	363
BstH2I	RGCGCY	1 cut(s)	16
BstHHI	GCGC	1 cut(s)	15
BstKTI	GATC	5 cut(s)	139, 175, 739, 762, 1525
BstMAI	GTCTC	4 cut(s)	260, 730, 852, 1223
BstMBI	GATC	5 cut(s)	136, 172, 736, 759, 1522
BstMWI	GCNNNNNNNGC	3 cut(s)	472, 594, 1313
BstNI	CCWGG	1 cut(s)	836
BstNSI	RCATGY	3 cut(s)	205, 646, 1491
BstPI	GGTNACC	1 cut(s)	566
BstSCI	CCNGG	1 cut(s)	834
BstSNI	TACGTA	1 cut(s)	483
BstUI	CGCG	1 cut(s)	363
BstV1I	GCAGC	3 cut(s)	22, 1057, 1305
BstV2I	GAAGAC	1 cut(s)	687
BstX2I	RGATCY	1 cut(s)	736
BstXI	CCANNNNNNTGG	1 cut(s)	300
BstYI	RGATCY	1 cut(s)	736
BsuI	GTATCC	1 cut(s)	965
BsuRI	GGCC	8 cut(s)	38, 42, 240, 304, 399, 821, 1106, 1566
BtgI	CCRYGG	1 cut(s)	1466
BtrI	CACGTC	1 cut(s)	1213
BtsCI	GGATG	3 cut(s)	241, 579, 1213
BtsIMutI	CAGTG	3 cut(s)	1107, 1188, 1515
Cac8I	GCNNGC	5 cut(s)	28, 40, 616, 1314, 1427
CaiI	CAGNNNCTG	1 cut(s)	848
CciI	TCATGA	1 cut(s)	438
CfoI	GCGC	1 cut(s)	15
Cfr10I	RCCGGY	2 cut(s)	38, 614
Cfr13I	GGNCC	6 cut(s)	41, 108, 398, 819, 1135, 1324
Csp6I	GTAC	8 cut(s)	47, 65, 283, 337, 484, 489, 657, 1240
CviAII	CATG	8 cut(s)	105, 202, 379, 439, 643, 681, 982, 1488
CviQI	GTAC	8 cut(s)	47, 65, 283, 337, 484, 489, 657, 1240
DdeI	CTNAG	7 cut(s)	231, 248, 584, 841, 1014, 1236, 1358
DpnI	GATC	5 cut(s)	138, 174, 738, 761, 1524
DpnII	GATC	5 cut(s)	136, 172, 736, 759, 1522
DriI	GACNNNNNGTC	1 cut(s)	787
EaeI	YGGCCR	2 cut(s)	36, 238
Eam1104I	CTCTTC	2 cut(s)	1086, 1125
Eam1105I	GACNNNNNGTC	1 cut(s)	787
EarI	CTCTTC	2 cut(s)	1086, 1125
Eco105I	TACGTA	1 cut(s)	483
Eco130I	CCWWGG	1 cut(s)	562
Eco24I	GRGCYC	1 cut(s)	842
Eco47I	GGWCC	3 cut(s)	108, 1135, 1324
Eco47III	AGCGCT	1 cut(s)	14
Eco57I	CTGAAG	3 cut(s)	263, 513, 1143
Eco88I	CYCGRG	2 cut(s)	727, 785
Eco91I	GGTNACC	1 cut(s)	566
EcoO109I	RGGNCCY	2 cut(s)	1135, 1324
EcoO65I	GGTNACC	1 cut(s)	566
EcoRI	GAATTC	4 cut(s)	676, 851, 926, 1009
EcoRII	CCWGG	1 cut(s)	834
EcoT14I	CCWWGG	1 cut(s)	562
EcoT38I	GRGCYC	1 cut(s)	842
ErhI	CCWWGG	1 cut(s)	562
Esp3I	CGTCTC	2 cut(s)	260, 730
FaeI	CATG	8 cut(s)	108, 205, 382, 442, 646, 684, 985, 1491
FaqI	GGGAC	4 cut(s)	18, 464, 983, 1121
FatI	CATG	8 cut(s)	104, 201, 378, 438, 642, 680, 981, 1487
FauI	CCCGC	1 cut(s)	1305
Fnu4HI	GCNGC	6 cut(s)	11, 189, 1046, 1149, 1294, 1305
FokI	GGATG	3 cut(s)	248, 586, 1220
FriOI	GRGCYC	1 cut(s)	842
FseI	GGCCGGCC	1 cut(s)	42
Fsp4HI	GCNGC	6 cut(s)	11, 189, 1046, 1149, 1294, 1305
FspBI	CTAG	5 cut(s)	323, 407, 662, 809, 866
GlaI	GCGC	1 cut(s)	14
GluI	GCNGC	6 cut(s)	11, 189, 1046, 1149, 1294, 1305
GsuI	CTGGAG	1 cut(s)	536
HaeII	RGCGCY	1 cut(s)	16
HaeIII	GGCC	8 cut(s)	38, 42, 240, 304, 399, 821, 1106, 1566
HapII	CCGG	5 cut(s)	39, 571, 615, 1049, 1301
HhaI	GCGC	1 cut(s)	15
Hin1II	CATG	8 cut(s)	108, 205, 382, 442, 646, 684, 985, 1491
Hin6I	GCGC	1 cut(s)	13
HinP1I	GCGC	1 cut(s)	13
HindIII	AAGCTT	2 cut(s)	257, 383
HinfI	GANTC	8 cut(s)	708, 824, 899, 905, 911, 1113, 1171, 1577
HpaII	CCGG	5 cut(s)	39, 571, 615, 1049, 1301
HphI	GGTGA	3 cut(s)	578, 779, 1429
Hpy166II	GTNNAC	2 cut(s)	659, 1186
Hpy188I	TCNGA	9 cut(s)	177, 559, 736, 850, 857, 904, 910, 916, 1015
Hpy188III	TCNNGA	9 cut(s)	71, 140, 439, 449, 745, 1110, 1195, 1451, 1526
Hpy8I	GTNNAC	2 cut(s)	659, 1186
Hpy99I	CGWCG	2 cut(s)	776, 782
HpyAV	CCTTC	6 cut(s)	488, 713, 758, 944, 1136, 1337
HpyCH4III	ACNGT	7 cut(s)	271, 488, 524, 671, 974, 1183, 1605
HpyCH4IV	ACGT	4 cut(s)	67, 453, 482, 1212
HpyCH4V	TGCA	4 cut(s)	57, 125, 466, 1458
HpyF10VI	GCNNNNNNNGC	3 cut(s)	472, 594, 1313
HpyF3I	CTNAG	7 cut(s)	231, 248, 584, 841, 1014, 1236, 1358
HpySE526I	ACGT	4 cut(s)	67, 453, 482, 1212
Hsp92II	CATG	8 cut(s)	108, 205, 382, 442, 646, 684, 985, 1491
HspAI	GCGC	1 cut(s)	13
KroI	GCCGGC	2 cut(s)	38, 614
KroNI	GCCGGC	2 cut(s)	40, 616
Kzo9I	GATC	5 cut(s)	136, 172, 736, 759, 1522
LguI	GCTCTTC	1 cut(s)	1086
LmnI	GCTCC	8 cut(s)	874, 988, 1030, 1145, 1216, 1354, 1422, 1539
Lsp1109I	GCAGC	3 cut(s)	22, 1057, 1305
LweI	GCATC	2 cut(s)	1047, 1467
MaeI	CTAG	5 cut(s)	323, 407, 662, 809, 866
MaeII	ACGT	4 cut(s)	67, 453, 482, 1212
MaeIII	GTNAC	7 cut(s)	68, 271, 418, 454, 566, 745, 767
MalI	GATC	5 cut(s)	138, 174, 738, 761, 1524
MbiI	CCGCTC	1 cut(s)	1148
MboI	GATC	5 cut(s)	136, 172, 736, 759, 1522
MboII	GAAGA	8 cut(s)	208, 404, 687, 1034, 1103, 1136, 1139, 1142
MfeI	CAATTG	1 cut(s)	1059
MflI	RGATCY	1 cut(s)	736
MhlI	GDGCHC	1 cut(s)	842
MlyI	GAGTC	2 cut(s)	833, 908
MmeI	TCCRAC	2 cut(s)	876, 1386
MroNI	GCCGGC	2 cut(s)	38, 614
MroXI	GAANNNNTTC	2 cut(s)	498, 1190
MseI	TTAA	4 cut(s)	117, 297, 635, 1612
MslI	CAYNNNNRTG	2 cut(s)	206, 647
MspI	CCGG	5 cut(s)	39, 571, 615, 1049, 1301
MspR9I	CCNGG	1 cut(s)	836
MunI	CAATTG	1 cut(s)	1059
Mva1269I	GAATGC	2 cut(s)	466, 1279
MvaI	CCWGG	1 cut(s)	836
MvnI	CGCG	1 cut(s)	363
MwoI	GCNNNNNNNGC	3 cut(s)	472, 594, 1313
NaeI	GCCGGC	2 cut(s)	40, 616
NdeII	GATC	5 cut(s)	136, 172, 736, 759, 1522
NgoMIV	GCCGGC	2 cut(s)	38, 614
NlaIII	CATG	8 cut(s)	108, 205, 382, 442, 646, 684, 985, 1491
NlaIV	GGNNCC	3 cut(s)	738, 820, 1137
NmeAIII	GCCGAG	1 cut(s)	847
NmuCI	GTSAC	4 cut(s)	68, 566, 745, 767
NspI	RCATGY	3 cut(s)	205, 646, 1491
NspV	TTCGAA	2 cut(s)	674, 930
PagI	TCATGA	1 cut(s)	438
PasI	CCCWGGG	1 cut(s)	835
PciSI	GCTCTTC	1 cut(s)	1086
PcsI	WCGNNNNNNNCGW	3 cut(s)	768, 777, 927
PctI	GAATGC	2 cut(s)	466, 1279
PdiI	GCCGGC	2 cut(s)	40, 616
PdmI	GAANNNNTTC	2 cut(s)	498, 1190
PfeI	GAWTC	6 cut(s)	708, 905, 911, 1113, 1171, 1577
PkrI	GCNGC	6 cut(s)	12, 190, 1047, 1150, 1295, 1306
PleI	GAGTC	2 cut(s)	832, 907
PpsI	GAGTC	2 cut(s)	832, 907
Ppu21I	YACGTR	1 cut(s)	483
PpuMI	RGGWCCY	2 cut(s)	1135, 1324
PsiI	TTATAA	2 cut(s)	309, 629
Psp5II	RGGWCCY	2 cut(s)	1135, 1324
Psp6I	CCWGG	1 cut(s)	834
PspEI	GGTNACC	1 cut(s)	566
PspGI	CCWGG	1 cut(s)	834
PspN4I	GGNNCC	3 cut(s)	738, 820, 1137
PspPI	GGNCC	6 cut(s)	41, 108, 398, 819, 1135, 1324
PspPPI	RGGWCCY	2 cut(s)	1135, 1324
PstNI	CAGNNNCTG	1 cut(s)	848
PsuI	RGATCY	1 cut(s)	736
RigI	GGCCGGCC	1 cut(s)	42
RsaI	GTAC	8 cut(s)	48, 66, 284, 338, 485, 490, 658, 1241
RsaNI	GTAC	8 cut(s)	47, 65, 283, 337, 484, 489, 657, 1240
RseI	CAYNNNNRTG	2 cut(s)	206, 647
SapI	GCTCTTC	1 cut(s)	1086
SaqAI	TTAA	4 cut(s)	117, 297, 635, 1612
SatI	GCNGC	6 cut(s)	11, 189, 1046, 1149, 1294, 1305
Sau3AI	GATC	5 cut(s)	136, 172, 736, 759, 1522
Sau96I	GGNCC	6 cut(s)	41, 108, 398, 819, 1135, 1324
SchI	GAGTC	2 cut(s)	833, 908
ScrFI	CCNGG	1 cut(s)	836
SduI	GDGCHC	1 cut(s)	842
SfaNI	GCATC	2 cut(s)	1047, 1467
SfuI	TTCGAA	2 cut(s)	674, 930
SinI	GGWCC	3 cut(s)	108, 1135, 1324
SmiMI	CAYNNNNRTG	2 cut(s)	206, 647
SmlI	CTYRAG	1 cut(s)	509
SmoI	CTYRAG	1 cut(s)	509
SnaBI	TACGTA	1 cut(s)	483
SsiI	CCGC	6 cut(s)	188, 361, 872, 1148, 1304, 1312
SspMI	CTAG	5 cut(s)	323, 407, 662, 809, 866
StyD4I	CCNGG	1 cut(s)	834
StyI	CCWWGG	1 cut(s)	562
TaaI	ACNGT	7 cut(s)	271, 488, 524, 671, 974, 1183, 1605
TaiI	ACGT	4 cut(s)	70, 456, 485, 1215
TaqI	TCGA	7 cut(s)	674, 706, 711, 762, 930, 962, 1041
TaqII	GACCGA	1 cut(s)	764
TatI	WGTACW	5 cut(s)	46, 282, 488, 656, 1239
TauI	GCSGC	3 cut(s)	191, 1151, 1307
TfiI	GAWTC	6 cut(s)	708, 905, 911, 1113, 1171, 1577
Tru1I	TTAA	4 cut(s)	117, 297, 635, 1612
Tru9I	TTAA	4 cut(s)	117, 297, 635, 1612
TscAI	CASTG	3 cut(s)	1107, 1188, 1522
TseFI	GTSAC	4 cut(s)	68, 566, 745, 767
TseI	GCWGC	3 cut(s)	10, 1045, 1293
Tsp45I	GTSAC	4 cut(s)	68, 566, 745, 767
TspDTI	ATGAA	6 cut(s)	395, 427, 669, 939, 970, 1548
TspGWI	ACGGA	1 cut(s)	729
TspRI	CASTG	3 cut(s)	1107, 1188, 1522
VpaK11BI	GGWCC	3 cut(s)	108, 1135, 1324
XapI	RAATTY	6 cut(s)	676, 793, 829, 851, 926, 1009
XceI	RCATGY	3 cut(s)	205, 646, 1491
XmnI	GAANNNNTTC	2 cut(s)	498, 1190
XspI	CTAG	5 cut(s)	323, 407, 662, 809, 866

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.