RLG00000021830

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0012436
Physical Location & Seq
Forward (+)
78674089 .. 78676113
2025 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000021830

Sequence Viewer

Length: 2025 bp
ATGACCACCACCATGTCCTCCGCCACCACCCTCGTCCTTCTCCTAACCCTAATCGCTACCGCCACCTCAGCCCCAATTCTTGGCCTAGATACCTTCCTCACCCACCAGTCCCGCTACGACCGGCAAGCCTCCAACGACTCCTTCCAGTTTCTCCCCTCCACTCTCCGCCACTCCCTCTCTCTCTCCTCGCCGTCTCTCTCCCACTCTCTCTCCTCCATCCTCTCCCTCACCCTCCCTCTCTCTCTCCACGTCCGCCTCGTCGGCCCTTCCTTCCCTTCCTCCTCCGCCACTCTCCTCTCCTCCTTCCTCGCCGCCTCCCAGACCTCCGATCACTTCCACGTCATCACCCCCGCAGACGCCGCCGACTCTCACCGCTTGGCCGTCAAGCACTCCCTCCATCTCGACGTCAGTCACTCCCCCTCCCTCGCCTCTCATCTCTCCAAAACCCTAGCCTCCGAGCTCGCCAAAACCCCCGCCAGTCTCCGATCGCCGCTCGTCTCCGTCGCCTACGACTCAATCGACCGGATCATCAAGCAGGACTTCGAGAAAGAGAAGCCGGTCCACGGCGTTTACCTCTATTTCTTGGATTTGGGCCCCCAATCCAAGAGCTATGCTTACAGCTATGGATCTGGCGACTCCTCCCCTGGCTTCACCAAGTGTTTGGGGAGCGTTTGGACCGGGTCGGACCGCTACATTTGGATCGATTTGGGCGCCGGACCGGTCGACTACGGCCCGGCGCTTTCCGGCGACGGTGTCTTGCCGAAAGGCGAGTTTCATCCTCTGGCGGCGTTGCACGGCTCGCCGAAAGCTCAGAAGGCTTTGCTGGCGGACTTGGCTTCCTTGGTGTGGAGTGCTTACCAGGTTCTTCTTGTTCCCTCTTTGAGAATTCCTGTTCAGTATGAGAATTCTTTGATTGTTCAGTTTATACATGTTTATGGAGGTGAGAGTGGTAAGGATTTGAGCGGTTTGGATTGGAAATCGATTGAGAGGACCTTTATGGATGAGGCTAAGGATAATGGCTTGTTGTTAGGGGATCAGTCTTTGAGTTTCAAGAATTATAAGGTGAAGTATTCGGAGTGCCCGATATGTTCATTTGCTATTGCCAGGTCGATTAATTCGTATACGTCGAGGTTCTTGTTTGATAACTATACGTTGATTGCGAGTGAGTATTTGGATTCGAAGAGATTGCATCAGATATTGTCTGACTCTGCTGAGGAGTTTAGGAGGGTGGCGGGGTTTCCTGAGGAGGATTTTGGCAGGGTGCTTCCTGTGTTTGTGTTTGATTTGGACTACCACATGCTGTTGCAGCTCGATAGGTATCACCAAACTGTTGCTTTTAGAGATATGGTGATTGCAGTGAGGACCAGGAACACACAGACTGTGAGTGATTATAGCTGCAATGGCCGCCATGTGTTTACACAGACGAGGGAGCTTGAGAGACCACTTGTTGGTTCGATTTTACAGAGTATGTGGGGAGTGTCGCCGACTCATATGTTGTGGAGCCCTAGGCACAATACTACGTTGGTGGATTACACGTGGAGTGTTGGGCAGACTCCATTTGGGCCGTTCTCGGAGATTTCATCACTATCATTCGTACAGAAGGATGCTGCTCGGAGAAATGTTCTTTTGACATCACTAAATTACAGCATATCGAGTGCTGTAGATGTTCTTGAATCCATAGCTGCACATGGTGGGGAGAGAAAGCTCCTGAAACGTAATCGACATGTTGAGTTTGTACAAAGGTGGAATTTCTTCAAGTACAAGCTGGACAAAGCAGTTTCTGCAATGTCACATTTGGACTTTGAGATGGCTTTATACTATATGAGGTCCTCAGATCATGATCTATATGCTATCCACTCTATTGTGTATCATGCCTCCCAGGAATTGGAGGCATCCCTTGTATGTTTCAAGGATCCACCATTTCCGTGGTCTTTTGTGTTTATGGTTGCAGTGCTTCTCCTTCTTGGCTATTATATTAGTTCTAGAAAACACAAACTATTCAGAAGTAAGAGTAAGCAATTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

675

Amino Acids

75.31

Weight (kDa)

7.42

Isoelectric Point (pI)

46.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7906 PF25483 79 - 292 1.5e-87 Domain of unknown function (DUF7906)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012436)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G28720 AT3G28720
fragaria_vesca FvH4_6g49180
malus_domestica MD09G1047700.v1.1 MD17G1047800.v1.1
prunus_persica Prupe.3G271300_v2.0.a1
pyrus_communis pycom111g03860 pycom17g04260
rosa_chinensis RchiOBHm_Chr2g0169061
rosa_laevigata RLG00000021830
rosa_multiflora Rmu_co8387085.1_g000001 Rmu_ssc0000393.1_g000028
rosa_roxburghii Rroxscaffold_2G00082500
rosa_rugosa Rorug02G0536600
rosa_samantha Rh2AG608400 Rh2BG621200 Rh2CG590000 Rh2DG631900
rosa_wichuraiana Rw2G050440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1059
AatII GACGTC 1 cut(s) 408
AccB1I GGYRCC 1 cut(s) 710
AccB7I CCANNNNNTGG 3 cut(s) 80, 1448, 1885
AccBSI CCGCTC 2 cut(s) 493, 963
AccI GTMKAC 2 cut(s) 723, 1121
AclWI GGATC 6 cut(s) 533, 634, 707, 1041, 1907, 1920
AcoI YGGCCR 2 cut(s) 378, 1402
AcsI RAATTY 3 cut(s) 885, 904, 1747
AcvI CACGTG 1 cut(s) 1536
AcyI GRCGYC 3 cut(s) 357, 405, 711
AdeI CACNNNGTG 2 cut(s) 657, 1691
AfaI GTAC 3 cut(s) 1596, 1737, 1760
AfiI CCNNNNNNNGG 5 cut(s) 80, 563, 846, 1448, 1885
AflIII ACRYGT 3 cut(s) 928, 1533, 1723
AgeI ACCGGT 1 cut(s) 718
AgsI TTSAA 4 cut(s) 1051, 1673, 1756, 1909
AjiI CACGTC 2 cut(s) 250, 340
AjnI CCWGG 5 cut(s) 643, 858, 1103, 1364, 1878
AjuI GAANNNNNNNTTGG 2 cut(s) 125, 157
Alw21I GWGCWC 1 cut(s) 462
Alw26I GTCTC 4 cut(s) 198, 485, 502, 1432
AlwI GGATC 6 cut(s) 533, 634, 707, 1041, 1907, 1920
AlwNI CAGNNNCTG 1 cut(s) 1781
AoxI GGCC 7 cut(s) 82, 262, 378, 592, 730, 1402, 1562
ApaI GGGCCC 1 cut(s) 596
ApeKI GCWGC 4 cut(s) 1306, 1395, 1607, 1682
ApoI RAATTY 3 cut(s) 885, 904, 1747
AseI ATTAAT 1 cut(s) 1113
AsiGI ACCGGT 1 cut(s) 718
Asp700I GAANNNNTTC 1 cut(s) 1751
AspA2I CCTAGG 1 cut(s) 1505
AspLEI GCGC 2 cut(s) 713, 739
AsuC2I CCSGG 2 cut(s) 679, 734
AsuHPI GGTGA 9 cut(s) 91, 220, 337, 362, 643, 953, 1075, 1313, 1360
AsuII TTCGAA 1 cut(s) 1178
AvaII GGWCC 7 cut(s) 559, 675, 685, 716, 990, 1362, 1827
AvrII CCTAGG 1 cut(s) 1505
AxyI CCTNAGG 1 cut(s) 1242
BaeGI GKGCMC 2 cut(s) 596, 1082
BamHI GGATCC 1 cut(s) 1912
BanI GGYRCC 1 cut(s) 710
BanII GRGCYC 3 cut(s) 462, 596, 1505
BbrPI CACGTG 1 cut(s) 1536
Bbv12I GWGCWC 1 cut(s) 462
BbvCI CCTCAGC 2 cut(s) 67, 1212
BbvI GCAGC 4 cut(s) 1318, 1382, 1594, 1669
BccI CCATC 3 cut(s) 224, 405, 1801
BceAI ACGGC 6 cut(s) 175, 365, 580, 745, 811, 1549
BcgI CGANNNNNNTGC 2 cut(s) 1168, 1202
BciT130I CCWGG 5 cut(s) 645, 860, 1105, 1366, 1880
BcnI CCSGG 2 cut(s) 679, 734
BcoDI GTCTC 4 cut(s) 198, 485, 502, 1432
BfaI CTAG 4 cut(s) 86, 449, 1506, 1983
BfmI CTRYAG 1 cut(s) 1659
BfoI RGCGCY 2 cut(s) 714, 740
BglI GCCNNNNNGGC 1 cut(s) 261
BisI GCNGC 9 cut(s) 312, 360, 491, 786, 1307, 1396, 1405, 1608, 1683
BlnI CCTAGG 1 cut(s) 1505
BlsI GCNGC 9 cut(s) 313, 361, 492, 787, 1308, 1397, 1406, 1609, 1684
Bme1390I CCNGG 7 cut(s) 645, 679, 734, 860, 1105, 1366, 1880
Bme18I GGWCC 7 cut(s) 559, 675, 685, 716, 990, 1362, 1827
BmgBI CACGTC 2 cut(s) 250, 340
BmiI GGNNCC 5 cut(s) 594, 595, 712, 1502, 1914
BmrFI CCNGG 7 cut(s) 645, 679, 734, 860, 1105, 1366, 1880
BmsI GCATC 3 cut(s) 1198, 1594, 1901
BoxI GACNNNNGTC 1 cut(s) 408
Bpu10I CCTNAGC 3 cut(s) 67, 1008, 1212
Bpu14I TTCGAA 1 cut(s) 1178
BpuEI CTTGAG 1 cut(s) 1454
BpuMI CCSGG 2 cut(s) 679, 734
Bsa29I ATCGAT 2 cut(s) 702, 980
BsaAI YACGTR 1 cut(s) 1536
BsaBI GATNNNNATC 2 cut(s) 1317, 1839
BsaHI GRCGYC 3 cut(s) 357, 405, 711
BsaI GGTCTC 1 cut(s) 1432
BsaJI CCNNGG 6 cut(s) 562, 643, 840, 1505, 1878, 1925
BsaWI WCCGGW 2 cut(s) 522, 718
BsaXI ACNNNNNCTCC 4 cut(s) 194, 224, 404, 434
Bsc4I CCNNNNNNNGG 5 cut(s) 80, 563, 846, 1448, 1885
Bse118I RCCGGY 3 cut(s) 120, 556, 718
Bse1I ACTGG 3 cut(s) 106, 145, 477
Bse21I CCTNAGG 1 cut(s) 1242
Bse3DI GCAATG 2 cut(s) 1405, 1791
Bse8I GATNNNNATC 2 cut(s) 1317, 1839
BseBI CCWGG 5 cut(s) 645, 860, 1105, 1366, 1880
BseCI ATCGAT 2 cut(s) 702, 980
BseDI CCNNGG 6 cut(s) 562, 643, 840, 1505, 1878, 1925
BseGI GGATG 5 cut(s) 216, 775, 1006, 1609, 1892
BseJI GATNNNNATC 2 cut(s) 1317, 1839
BseLI CCNNNNNNNGG 5 cut(s) 80, 563, 846, 1448, 1885
BseMI GCAATG 2 cut(s) 1405, 1791
BseMII CTCAG 5 cut(s) 81, 824, 1203, 1233, 1845
BseNI ACTGG 3 cut(s) 106, 145, 477
BseRI GAGGAG 8 cut(s) 175, 202, 271, 284, 289, 628, 1229, 1259
BseSI GKGCMC 2 cut(s) 596, 1082
BseXI GCAGC 4 cut(s) 1318, 1382, 1594, 1669
BsgI GTGCAG 1 cut(s) 1668
Bsh1285I CGRYCG 4 cut(s) 121, 488, 523, 723
BshFI GGCC 7 cut(s) 84, 264, 380, 594, 732, 1404, 1564
BshNI GGYRCC 1 cut(s) 710
BshTI ACCGGT 1 cut(s) 718
BshVI ATCGAT 2 cut(s) 702, 980
BsiEI CGRYCG 4 cut(s) 121, 488, 523, 723
BsiHKAI GWGCWC 1 cut(s) 462
BsiSI CCGG 8 cut(s) 121, 523, 557, 678, 714, 719, 734, 744
BslFI GGGAC 1 cut(s) 94
BslI CCNNNNNNNGG 5 cut(s) 80, 563, 846, 1448, 1885
BsmAI GTCTC 4 cut(s) 198, 485, 502, 1432
BsmBI CGTCTC 2 cut(s) 198, 502
BsmFI GGGAC 1 cut(s) 94
BsnI GGCC 7 cut(s) 84, 264, 380, 594, 732, 1404, 1564
Bso31I GGTCTC 1 cut(s) 1432
Bsp119I TTCGAA 1 cut(s) 1178
Bsp120I GGGCCC 1 cut(s) 592
Bsp1286I GDGCHC 4 cut(s) 462, 596, 1082, 1505
Bsp1407I TGTACA 1 cut(s) 1735
Bsp143I GATC 9 cut(s) 328, 485, 525, 626, 699, 1033, 1834, 1840, 1912
BspANI GGCC 7 cut(s) 84, 264, 380, 594, 732, 1404, 1564
BspCNI CTCAG 5 cut(s) 80, 823, 1204, 1234, 1844
BspDI ATCGAT 2 cut(s) 702, 980
BspHI TCATGA 1 cut(s) 1837
BspLI GGNNCC 5 cut(s) 594, 595, 712, 1502, 1914
BspPI GGATC 6 cut(s) 533, 634, 707, 1041, 1907, 1920
BspT104I TTCGAA 1 cut(s) 1178
BspT107I GGYRCC 1 cut(s) 710
BspTNI GGTCTC 1 cut(s) 1432
BsrBI CCGCTC 2 cut(s) 493, 963
BsrDI GCAATG 2 cut(s) 1405, 1791
BsrFI RCCGGY 3 cut(s) 120, 556, 718
BsrGI TGTACA 1 cut(s) 1735
BsrI ACTGG 3 cut(s) 106, 145, 477
BssAI RCCGGY 3 cut(s) 120, 556, 718
BssECI CCNNGG 6 cut(s) 562, 643, 840, 1505, 1878, 1925
BssMI GATC 9 cut(s) 328, 485, 525, 626, 699, 1033, 1834, 1840, 1912
BssNAI GTATAC 1 cut(s) 1122
BssNI GRCGYC 3 cut(s) 357, 405, 711
BssT1I CCWWGG 2 cut(s) 840, 1505
Bst1107I GTATAC 1 cut(s) 1122
Bst2UI CCWGG 5 cut(s) 645, 860, 1105, 1366, 1880
Bst4CI ACNGT 3 cut(s) 752, 1330, 1381
Bst6I CTCTTC 1 cut(s) 1175
BstACI GRCGYC 3 cut(s) 357, 405, 711
BstAPI GCANNNNNTGC 1 cut(s) 1781
BstAUI TGTACA 1 cut(s) 1735
BstBAI YACGTR 1 cut(s) 1536
BstBI TTCGAA 1 cut(s) 1178
BstC8I GCNNGC 4 cut(s) 126, 462, 800, 825
BstDEI CTNAG 6 cut(s) 67, 810, 1008, 1212, 1242, 1831
BstDSI CCRYGG 2 cut(s) 562, 1925
BstF5I GGATG 5 cut(s) 216, 775, 1006, 1609, 1892
BstH2I RGCGCY 2 cut(s) 714, 740
BstHHI GCGC 2 cut(s) 713, 739
BstKTI GATC 9 cut(s) 331, 488, 528, 629, 702, 1036, 1837, 1843, 1915
BstMAI GTCTC 4 cut(s) 198, 485, 502, 1432
BstMBI GATC 9 cut(s) 328, 485, 525, 626, 699, 1033, 1834, 1840, 1912
BstMCI CGRYCG 4 cut(s) 121, 488, 523, 723
BstNI CCWGG 5 cut(s) 645, 860, 1105, 1366, 1880
BstNSI RCATGY 3 cut(s) 932, 1300, 1727
BstPAI GACNNNNGTC 1 cut(s) 408
BstSCI CCNGG 7 cut(s) 643, 677, 732, 858, 1103, 1364, 1878
BstSFI CTRYAG 1 cut(s) 1659
BstSLI GKGCMC 2 cut(s) 596, 1082
BstV1I GCAGC 4 cut(s) 1318, 1382, 1594, 1669
BstX2I RGATCY 2 cut(s) 626, 1912
BstXI CCANNNNNNTGG 2 cut(s) 661, 1926
BstYI RGATCY 2 cut(s) 626, 1912
BstZ17I GTATAC 1 cut(s) 1122
Bsu15I ATCGAT 2 cut(s) 702, 980
Bsu36I CCTNAGG 1 cut(s) 1242
BsuRI GGCC 7 cut(s) 84, 264, 380, 594, 732, 1404, 1564
BsuTUI ATCGAT 2 cut(s) 702, 980
BtgI CCRYGG 2 cut(s) 562, 1925
BtrI CACGTC 2 cut(s) 250, 340
BtsCI GGATG 5 cut(s) 216, 775, 1006, 1609, 1892
BtsI GCAGTG 2 cut(s) 1362, 1956
BtsIMutI CAGTG 2 cut(s) 1362, 1956
Cac8I GCNNGC 4 cut(s) 126, 462, 800, 825
CaiI CAGNNNCTG 1 cut(s) 1781
CciI TCATGA 1 cut(s) 1837
CfoI GCGC 2 cut(s) 713, 739
Cfr10I RCCGGY 3 cut(s) 120, 556, 718
ClaI ATCGAT 2 cut(s) 702, 980
CpoI CGGWCCG 2 cut(s) 685, 716
CseI GACGC 1 cut(s) 365
CsiI ACCWGGT 1 cut(s) 858
Csp6I GTAC 3 cut(s) 1595, 1736, 1759
CspAI ACCGGT 1 cut(s) 718
CspI CGGWCCG 2 cut(s) 685, 716
CviAII CATG 8 cut(s) 13, 929, 1297, 1409, 1688, 1724, 1838, 1871
CviQI GTAC 3 cut(s) 1595, 1736, 1759
DdeI CTNAG 6 cut(s) 67, 810, 1008, 1212, 1242, 1831
DinI GGCGCC 1 cut(s) 712
DpnI GATC 9 cut(s) 330, 487, 527, 628, 701, 1035, 1836, 1842, 1914
DpnII GATC 9 cut(s) 328, 485, 525, 626, 699, 1033, 1834, 1840, 1912
DraIII CACNNNGTG 2 cut(s) 657, 1691
EaeI YGGCCR 2 cut(s) 378, 1402
Eam1104I CTCTTC 1 cut(s) 1175
EarI CTCTTC 1 cut(s) 1175
EciI GGCGGA 5 cut(s) 10, 155, 242, 274, 842
Ecl136II GAGCTC 1 cut(s) 460
Eco130I CCWWGG 2 cut(s) 840, 1505
Eco24I GRGCYC 3 cut(s) 462, 596, 1505
Eco31I GGTCTC 1 cut(s) 1432
Eco47I GGWCC 7 cut(s) 559, 675, 685, 716, 990, 1362, 1827
Eco53kI GAGCTC 1 cut(s) 460
Eco72I CACGTG 1 cut(s) 1536
Eco81I CCTNAGG 1 cut(s) 1242
EcoICRI GAGCTC 1 cut(s) 460
EcoO109I RGGNCCY 3 cut(s) 593, 990, 1827
EcoRI GAATTC 2 cut(s) 885, 904
EcoRII CCWGG 5 cut(s) 643, 858, 1103, 1364, 1878
EcoT14I CCWWGG 2 cut(s) 840, 1505
EcoT38I GRGCYC 3 cut(s) 462, 596, 1505
EgeI GGCGCC 1 cut(s) 712
EheI GGCGCC 1 cut(s) 712
ErhI CCWWGG 2 cut(s) 840, 1505
Esp3I CGTCTC 2 cut(s) 198, 502
FaeI CATG 8 cut(s) 16, 932, 1300, 1412, 1691, 1727, 1841, 1874
FalI AAGNNNNNCTT 2 cut(s) 524, 556
FaqI GGGAC 1 cut(s) 94
FatI CATG 8 cut(s) 12, 928, 1296, 1408, 1687, 1723, 1837, 1870
FauI CCCGC 4 cut(s) 119, 358, 481, 1225
FauNDI CATATG 1 cut(s) 1491
FblI GTMKAC 2 cut(s) 723, 1121
Fnu4HI GCNGC 9 cut(s) 312, 360, 491, 786, 1307, 1396, 1405, 1608, 1683
FokI GGATG 5 cut(s) 203, 762, 1013, 1616, 1879
FriOI GRGCYC 3 cut(s) 462, 596, 1505
Fsp4HI GCNGC 9 cut(s) 312, 360, 491, 786, 1307, 1396, 1405, 1608, 1683
FspBI CTAG 4 cut(s) 86, 449, 1506, 1983
GlaI GCGC 2 cut(s) 712, 738
GluI GCNGC 9 cut(s) 312, 360, 491, 786, 1307, 1396, 1405, 1608, 1683
HaeII RGCGCY 2 cut(s) 714, 740
HaeIII GGCC 7 cut(s) 84, 264, 380, 594, 732, 1404, 1564
HapII CCGG 8 cut(s) 121, 523, 557, 678, 714, 719, 734, 744
HgaI GACGC 1 cut(s) 365
HhaI GCGC 2 cut(s) 713, 739
Hin1I GRCGYC 3 cut(s) 357, 405, 711
Hin1II CATG 8 cut(s) 16, 932, 1300, 1412, 1691, 1727, 1841, 1874
Hin6I GCGC 2 cut(s) 711, 737
HinP1I GCGC 2 cut(s) 711, 737
HincII GTYRAC 1 cut(s) 724
HindII GTYRAC 1 cut(s) 724
HinfI GANTC 9 cut(s) 137, 365, 512, 635, 1175, 1205, 1486, 1552, 1673
HpaII CCGG 8 cut(s) 121, 523, 557, 678, 714, 719, 734, 744
HphI GGTGA 9 cut(s) 91, 220, 337, 362, 643, 953, 1075, 1313, 1360
Hpy166II GTNNAC 5 cut(s) 562, 571, 724, 1122, 1416
Hpy188III TCNNGA 8 cut(s) 401, 544, 1051, 1241, 1670, 1708, 1838, 1983
Hpy8I GTNNAC 5 cut(s) 562, 571, 724, 1122, 1416
Hpy99I CGWCG 5 cut(s) 263, 407, 506, 752, 1129
HpyCH4III ACNGT 3 cut(s) 752, 1330, 1381
HpyCH4IV ACGT 8 cut(s) 249, 339, 405, 1124, 1151, 1520, 1535, 1714
HpyCH4V TGCA 8 cut(s) 793, 1189, 1306, 1355, 1398, 1685, 1784, 1949
HpyF3I CTNAG 6 cut(s) 67, 810, 1008, 1212, 1242, 1831
HpySE526I ACGT 8 cut(s) 249, 339, 405, 1124, 1151, 1520, 1535, 1714
Hsp92I GRCGYC 3 cut(s) 357, 405, 711
Hsp92II CATG 8 cut(s) 16, 932, 1300, 1412, 1691, 1727, 1841, 1874
HspAI GCGC 2 cut(s) 711, 737
KasI GGCGCC 1 cut(s) 710
Kzo9I GATC 9 cut(s) 328, 485, 525, 626, 699, 1033, 1834, 1840, 1912
LmnI GCTCC 4 cut(s) 666, 1429, 1500, 1710
Lsp1109I GCAGC 4 cut(s) 1318, 1382, 1594, 1669
LweI GCATC 3 cut(s) 1198, 1594, 1901
MabI ACCWGGT 1 cut(s) 858
MaeI CTAG 4 cut(s) 86, 449, 1506, 1983
MaeII ACGT 8 cut(s) 249, 339, 405, 1124, 1151, 1520, 1535, 1714
MaeIII GTNAC 2 cut(s) 410, 1788
MalI GATC 9 cut(s) 330, 487, 527, 628, 701, 1035, 1836, 1842, 1914
MbiI CCGCTC 2 cut(s) 493, 963
MboI GATC 9 cut(s) 328, 485, 525, 626, 699, 1033, 1834, 1840, 1912
MboII GAAGA 3 cut(s) 857, 1192, 1744
MflI RGATCY 2 cut(s) 626, 1912
MhlI GDGCHC 4 cut(s) 462, 596, 1082, 1505
MluCI AATT 9 cut(s) 75, 885, 904, 1054, 1114, 1639, 1747, 1883, 2018
Mly113I GGCGCC 1 cut(s) 711
MlyI GAGTC 7 cut(s) 131, 359, 506, 629, 1199, 1480, 1546
MmeI TCCRAC 2 cut(s) 156, 663
MroXI GAANNNNTTC 1 cut(s) 1751
MseI TTAA 1 cut(s) 1113
MslI CAYNNNNRTG 3 cut(s) 11, 933, 1924
MspI CCGG 8 cut(s) 121, 523, 557, 678, 714, 719, 734, 744
MspR9I CCNGG 7 cut(s) 645, 679, 734, 860, 1105, 1366, 1880
MvaI CCWGG 5 cut(s) 645, 860, 1105, 1366, 1880
NarI GGCGCC 1 cut(s) 711
NciI CCSGG 2 cut(s) 679, 734
NdeI CATATG 1 cut(s) 1491
NdeII GATC 9 cut(s) 328, 485, 525, 626, 699, 1033, 1834, 1840, 1912
NlaIII CATG 8 cut(s) 16, 932, 1300, 1412, 1691, 1727, 1841, 1874
NlaIV GGNNCC 5 cut(s) 594, 595, 712, 1502, 1914
NmuCI GTSAC 2 cut(s) 410, 1788
NspI RCATGY 3 cut(s) 932, 1300, 1727
NspV TTCGAA 1 cut(s) 1178
PagI TCATGA 1 cut(s) 1837
PciI ACATGT 2 cut(s) 928, 1723
PcsI WCGNNNNNNNCGW 6 cut(s) 255, 516, 1079, 1115, 1124, 1157
PdmI GAANNNNTTC 1 cut(s) 1751
PfeI GAWTC 2 cut(s) 1175, 1673
PflFI GACNNNGTC 2 cut(s) 679, 752
PflMI CCANNNNNTGG 3 cut(s) 80, 1448, 1885
PinAI ACCGGT 1 cut(s) 718
PkrI GCNGC 9 cut(s) 313, 361, 492, 787, 1308, 1397, 1406, 1609, 1684
Ple19I CGATCG 1 cut(s) 488
PleI GAGTC 7 cut(s) 131, 359, 506, 629, 1199, 1480, 1546
PluTI GGCGCC 1 cut(s) 714
PmaCI CACGTG 1 cut(s) 1536
PmlI CACGTG 1 cut(s) 1536
PpsI GAGTC 7 cut(s) 131, 359, 506, 629, 1199, 1480, 1546
Ppu21I YACGTR 1 cut(s) 1536
PpuMI RGGWCCY 2 cut(s) 990, 1827
PscI ACATGT 2 cut(s) 928, 1723
PshAI GACNNNNGTC 1 cut(s) 408
PshBI ATTAAT 1 cut(s) 1113
PsiI TTATAA 1 cut(s) 1059
Psp124BI GAGCTC 1 cut(s) 462
Psp5II RGGWCCY 2 cut(s) 990, 1827
Psp6I CCWGG 5 cut(s) 643, 858, 1103, 1364, 1878
PspCI CACGTG 1 cut(s) 1536
PspGI CCWGG 5 cut(s) 643, 858, 1103, 1364, 1878
PspN4I GGNNCC 5 cut(s) 594, 595, 712, 1502, 1914
PspOMI GGGCCC 1 cut(s) 592
PspPPI RGGWCCY 2 cut(s) 990, 1827
PstNI CAGNNNCTG 1 cut(s) 1781
PsuI RGATCY 2 cut(s) 626, 1912
PsyI GACNNNGTC 2 cut(s) 679, 752
PvuI CGATCG 1 cut(s) 488
RsaI GTAC 3 cut(s) 1596, 1737, 1760
RsaNI GTAC 3 cut(s) 1595, 1736, 1759
RseI CAYNNNNRTG 3 cut(s) 11, 933, 1924
Rsr2I CGGWCCG 2 cut(s) 685, 716
RsrII CGGWCCG 2 cut(s) 685, 716
SacI GAGCTC 1 cut(s) 462
SalI GTCGAC 1 cut(s) 722
SaqAI TTAA 1 cut(s) 1113
SatI GCNGC 9 cut(s) 312, 360, 491, 786, 1307, 1396, 1405, 1608, 1683
Sau3AI GATC 9 cut(s) 328, 485, 525, 626, 699, 1033, 1834, 1840, 1912
SchI GAGTC 7 cut(s) 131, 359, 506, 629, 1199, 1480, 1546
ScrFI CCNGG 7 cut(s) 645, 679, 734, 860, 1105, 1366, 1880
SduI GDGCHC 4 cut(s) 462, 596, 1082, 1505
SexAI ACCWGGT 1 cut(s) 858
SfaNI GCATC 3 cut(s) 1198, 1594, 1901
SfcI CTRYAG 1 cut(s) 1659
SfoI GGCGCC 1 cut(s) 712
SfuI TTCGAA 1 cut(s) 1178
SinI GGWCC 7 cut(s) 559, 675, 685, 716, 990, 1362, 1827
SmiMI CAYNNNNRTG 3 cut(s) 11, 933, 1924
SmlI CTYRAG 1 cut(s) 1433
SmoI CTYRAG 1 cut(s) 1433
Sse9I AATT 9 cut(s) 75, 885, 904, 1054, 1114, 1639, 1747, 1883, 2018
SspDI GGCGCC 1 cut(s) 710
SspMI CTAG 4 cut(s) 86, 449, 1506, 1983
SstI GAGCTC 1 cut(s) 462
StyD4I CCNGG 7 cut(s) 643, 677, 732, 858, 1103, 1364, 1878
StyI CCWWGG 2 cut(s) 840, 1505
TaaI ACNGT 3 cut(s) 752, 1330, 1381
TaiI ACGT 8 cut(s) 252, 342, 408, 1127, 1154, 1523, 1538, 1717
TasI AATT 9 cut(s) 75, 885, 904, 1054, 1114, 1639, 1747, 1883, 2018
TatI WGTACW 2 cut(s) 1735, 1758
TauI GCSGC 5 cut(s) 314, 362, 493, 788, 1407
TfiI GAWTC 2 cut(s) 1175, 1673
Tru1I TTAA 1 cut(s) 1113
Tru9I TTAA 1 cut(s) 1113
TscAI CASTG 2 cut(s) 1362, 1956
TseFI GTSAC 2 cut(s) 410, 1788
TseI GCWGC 4 cut(s) 1306, 1395, 1607, 1682
Tsp45I GTSAC 2 cut(s) 410, 1788
TspDTI ATGAA 3 cut(s) 764, 1080, 1569
TspGWI ACGGA 2 cut(s) 490, 1914
TspRI CASTG 2 cut(s) 1362, 1956
Tth111I GACNNNGTC 2 cut(s) 679, 752
Van91I CCANNNNNTGG 3 cut(s) 80, 1448, 1885
VpaK11BI GGWCC 7 cut(s) 559, 675, 685, 716, 990, 1362, 1827
VspI ATTAAT 1 cut(s) 1113
XapI RAATTY 3 cut(s) 885, 904, 1747
XbaI TCTAGA 1 cut(s) 1982
XceI RCATGY 3 cut(s) 932, 1300, 1727
XcmI CCANNNNNNNNNTGG 1 cut(s) 1923
XmaJI CCTAGG 1 cut(s) 1505
XmiI GTMKAC 2 cut(s) 723, 1121
XmnI GAANNNNTTC 1 cut(s) 1751
XspI CTAG 4 cut(s) 86, 449, 1506, 1983
ZraI GACGTC 1 cut(s) 406
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.