Rh2AG608400

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0012436
Physical Location & Seq
Forward (+)
83563191 .. 83565418
2228 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG608400.1

Sequence Viewer

Length: 2052 bp
ATGACCACCACCATGTCCTCCGCCACGGCCACCACCACCCTCCTCCTCCTCCTCCTCCTCCTCCTAACCCTAATCGCCACCTCCACCTCCACCTCAGCCCCAATTCTCGGCCTCGACACCTTCCTCACCCACCAGTCCCGCTACGACCGGCAAGCCTCCAACGACTCCTTCCAGTCTCTCTCCTCCACTCTCCGCCACTCCCTTTCTCTCTCCTCGCCGTCTCTCTCCCACTCTCTCTCCTCCATCCTCTCCCTCACCATCCCTCTCTCTCTCCACGTCCGCCTCGTCGGCCCTTCCTTCCCTTCCTCCTCCGCCACTCTCCTCTCCTCCTTCCTCTCCGCCTCCCAGACCTCCGATCACTTCCACGTCATCACCCCCGCCGACGCCGCCGACTCTCACCGCTTGGCCGTCAAGCACTCCCTCCACCTCGACATCAGTCACTCCCCCTCCCTCGCCTCTCAGCTCTCCAAAACCCTAGCCTCCGAGCTCGCCAATACCCCCGCCAGTCTCCGATCGCCGCTCGTCTCCGTCGCCTACGACTCAATCGACCGGATCATCAAGGAGGACTTCGAGAAAGAGAAGCCGGTCCACGGCGTTTACCTCTATTTCTTGGATTTGGGGCCCCAATCCAAGAGCTATGCTTACAGCTATGGATCTGGTGACTCCTCTCCTGGCTTCACCAAGTGCTTGGGCAGCGTTTGGACCGGGTCGGACCGCTACATTTGGATCGATTTGGGCGCCGGACCGGTCGACTACGGCCCGGCGCTTTCCGGCGACGGTGTCTTGCCGAAAGGCGAGTTTCATCCGCTGGCGGCGTTGCACGGCTCGCCGAAAGCTCAGAAGGCTTTGCTGGCGGACTTGGCTTCCTTGGTTTGGAGTGCTTACCAGGTTCTTCTTGTTCCCTCTTTGAGAATTCCTGTTCAGTATGAGAATTCTTTGATTGTTCAGTTTATACATGTTTATGGAGGTGAGAGTGGTAAGGATTCAAGTGGTTTGGATTGGAAATCGATTGAGAGGACCTTTATGGATGAGGCTAAGGATAATGGCTTGTTGTTAGGGGATCAGACTTTGAGTTTCAAGAATTATAAGGTGAAGTATTCGGAGTGCTCGATATGTTCATTTGCTATTGCCAGGTCGATTAATTCGTATACATCGAGGTTCTTGTTTGATAACTATACGTTGATTGCGAGTGAGTATTTGGACTCGAAGAGATTGCATCAGATATTGTCTGACTCTGCTGAGGAGTTTAGGAGGGTTGCGGGGTTTCCTGAGGAAGATTTTGGCAGGGTGCTTCCTGTGTATGTGTTTGATTTGGACTACCACATGCTGTTGCTGCTCGATAGGTATCACCAAACAGTTGCTTTTAGAGATATGGTGATTGCAGTGAGGACCAGGAATACACAGACTGTGAGTGATTATAGCTGCAATGGCCGCCATGTGTTTACACAGACGAGGGAGCTTGAGAGACCACTTGTTGGTTCGATTTTACAGAGTATGTGGGGAGTGTCGCCGACTCATATGTTGTGGAGCCCTAGGCACAATACTACGTTGGTGGATTACACATGGAGTGTTGGGCAGACTCCATTTGGGCCGTTCTCGGAGATTTCATCACTATCATTCGTACAGAAGGATGCTGCTCGGAGAAATGTTCTTTTGACATCACTAAATTACAGCATATCGAGTGCTGTAGATGTTCTTGAATCCATAGCTGCACATGGTGGGGAGAGAAAGCTCCTGAAACGTAATCGACATGTTGAGTTCGTACAAAGGTGGAATTTCTTCAAGTACAAGCTGGACAAAGCAGTTTCTGCAATGTCACATTTGGACTTTGAGATGGCTTTATACTATATGAGGTCCTCAGATCATGATCTATATGCTATCCACTCGATTGTGTATCATGCCTCCCAGGAATTGGAGGCATCCCTTGTATGTTTCAAGGATCCACCATTTCCGTGGTCTTTTGTGTTTATGGTTGCAGTGCTTCTCCTTCTTGGCTATTATATTAGTTCTAGAAAACACAAACTATTCAGAAGTAAGAGTAAGCAATTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

683

Amino Acids

76.18

Weight (kDa)

6.98

Isoelectric Point (pI)

44.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7906 PF25483 88 - 301 2.3e-87 Domain of unknown function (DUF7906)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012436)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G28720 AT3G28720
fragaria_vesca FvH4_6g49180
malus_domestica MD09G1047700.v1.1 MD17G1047800.v1.1
prunus_persica Prupe.3G271300_v2.0.a1
pyrus_communis pycom111g03860 pycom17g04260
rosa_chinensis RchiOBHm_Chr2g0169061
rosa_laevigata RLG00000021830
rosa_multiflora Rmu_co8387085.1_g000001 Rmu_ssc0000393.1_g000028
rosa_roxburghii Rroxscaffold_2G00082500
rosa_rugosa Rorug02G0536600
rosa_samantha Rh2AG608400 Rh2BG621200 Rh2CG590000 Rh2DG631900
rosa_wichuraiana Rw2G050440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1086
AccB1I GGYRCC 1 cut(s) 737
AccB7I CCANNNNNTGG 2 cut(s) 1475, 1912
AccBSI CCGCTC 1 cut(s) 520
AccI GTMKAC 2 cut(s) 750, 1148
AclWI GGATC 6 cut(s) 560, 661, 734, 1068, 1934, 1947
AcoI YGGCCR 3 cut(s) 27, 405, 1429
AcsI RAATTY 3 cut(s) 912, 931, 1774
AcyI GRCGYC 2 cut(s) 384, 738
AdeI CACNNNGTG 2 cut(s) 684, 1718
AfaI GTAC 3 cut(s) 1623, 1764, 1787
AfiI CCNNNNNNNGG 5 cut(s) 107, 590, 873, 1475, 1912
AflIII ACRYGT 2 cut(s) 955, 1750
AgeI ACCGGT 1 cut(s) 745
AgsI TTSAA 5 cut(s) 987, 1078, 1700, 1783, 1936
AjiI CACGTC 2 cut(s) 277, 367
AjnI CCWGG 5 cut(s) 670, 885, 1130, 1391, 1905
AjuI GAANNNNNNNTTGG 2 cut(s) 152, 184
Alw21I GWGCWC 2 cut(s) 489, 1109
Alw26I GTCTC 5 cut(s) 180, 225, 512, 529, 1459
AlwI GGATC 6 cut(s) 560, 661, 734, 1068, 1934, 1947
AlwNI CAGNNNCTG 1 cut(s) 1808
AoxI GGCC 8 cut(s) 27, 109, 289, 405, 620, 757, 1429, 1589
ApaI GGGCCC 1 cut(s) 624
ApeKI GCWGC 5 cut(s) 693, 1333, 1422, 1634, 1709
ApoI RAATTY 3 cut(s) 912, 931, 1774
AseI ATTAAT 1 cut(s) 1140
AsiGI ACCGGT 1 cut(s) 745
Asp700I GAANNNNTTC 1 cut(s) 1778
AspA2I CCTAGG 1 cut(s) 1532
AspLEI GCGC 2 cut(s) 740, 766
AsuC2I CCSGG 2 cut(s) 706, 761
AvaII GGWCC 7 cut(s) 586, 702, 712, 743, 1017, 1389, 1854
AvrII CCTAGG 1 cut(s) 1532
AxyI CCTNAGG 1 cut(s) 1269
BaeGI GKGCMC 1 cut(s) 624
BamHI GGATCC 1 cut(s) 1939
BanI GGYRCC 1 cut(s) 737
BanII GRGCYC 3 cut(s) 489, 624, 1532
Bbv12I GWGCWC 2 cut(s) 489, 1109
BbvCI CCTCAGC 2 cut(s) 94, 1239
BbvI GCAGC 5 cut(s) 705, 1320, 1409, 1621, 1696
BccI CCATC 3 cut(s) 251, 266, 1828
BceAI ACGGC 7 cut(s) 42, 202, 392, 607, 772, 838, 1576
BcgI CGANNNNNNTGC 2 cut(s) 1195, 1229
BciT130I CCWGG 5 cut(s) 672, 887, 1132, 1393, 1907
BcnI CCSGG 2 cut(s) 706, 761
BcoDI GTCTC 5 cut(s) 180, 225, 512, 529, 1459
BfaI CTAG 3 cut(s) 476, 1533, 2010
BfmI CTRYAG 1 cut(s) 1686
BfoI RGCGCY 2 cut(s) 741, 767
BglI GCCNNNNNGGC 1 cut(s) 288
BisI GCNGC 9 cut(s) 387, 518, 694, 813, 1334, 1423, 1432, 1635, 1710
BlnI CCTAGG 1 cut(s) 1532
BlsI GCNGC 9 cut(s) 388, 519, 695, 814, 1335, 1424, 1433, 1636, 1711
Bme1390I CCNGG 7 cut(s) 672, 706, 761, 887, 1132, 1393, 1907
Bme18I GGWCC 7 cut(s) 586, 702, 712, 743, 1017, 1389, 1854
BmgBI CACGTC 2 cut(s) 277, 367
BmiI GGNNCC 6 cut(s) 621, 622, 623, 739, 1529, 1941
BmrFI CCNGG 7 cut(s) 672, 706, 761, 887, 1132, 1393, 1907
BmsI GCATC 3 cut(s) 1225, 1621, 1928
BoxI GACNNNNGTC 1 cut(s) 435
Bpu10I CCTNAGC 3 cut(s) 94, 1035, 1239
BpuEI CTTGAG 1 cut(s) 1481
BpuMI CCSGG 2 cut(s) 706, 761
Bsa29I ATCGAT 2 cut(s) 729, 1007
BsaBI GATNNNNATC 2 cut(s) 1344, 1866
BsaHI GRCGYC 2 cut(s) 384, 738
BsaI GGTCTC 1 cut(s) 1459
BsaJI CCNNGG 6 cut(s) 24, 589, 867, 1532, 1905, 1952
BsaWI WCCGGW 2 cut(s) 549, 745
BsaXI ACNNNNNCTCC 4 cut(s) 221, 251, 431, 461
Bsc4I CCNNNNNNNGG 5 cut(s) 107, 590, 873, 1475, 1912
Bse118I RCCGGY 3 cut(s) 147, 583, 745
Bse1I ACTGG 3 cut(s) 133, 172, 504
Bse21I CCTNAGG 1 cut(s) 1269
Bse3DI GCAATG 2 cut(s) 1432, 1818
Bse8I GATNNNNATC 2 cut(s) 1344, 1866
BseBI CCWGG 5 cut(s) 672, 887, 1132, 1393, 1907
BseCI ATCGAT 2 cut(s) 729, 1007
BseDI CCNNGG 6 cut(s) 24, 589, 867, 1532, 1905, 1952
BseGI GGATG 6 cut(s) 243, 258, 802, 1033, 1636, 1919
BseJI GATNNNNATC 2 cut(s) 1344, 1866
BseLI CCNNNNNNNGG 5 cut(s) 107, 590, 873, 1475, 1912
BseMI GCAATG 2 cut(s) 1432, 1818
BseMII CTCAG 6 cut(s) 108, 473, 851, 1230, 1260, 1872
BseNI ACTGG 3 cut(s) 133, 172, 504
BseSI GKGCMC 1 cut(s) 624
BseXI GCAGC 5 cut(s) 705, 1320, 1409, 1621, 1696
BsgI GTGCAG 1 cut(s) 1695
Bsh1285I CGRYCG 4 cut(s) 148, 515, 550, 750
BshFI GGCC 8 cut(s) 29, 111, 291, 407, 622, 759, 1431, 1591
BshNI GGYRCC 1 cut(s) 737
BshTI ACCGGT 1 cut(s) 745
BshVI ATCGAT 2 cut(s) 729, 1007
BsiEI CGRYCG 4 cut(s) 148, 515, 550, 750
BsiHKAI GWGCWC 2 cut(s) 489, 1109
BsiSI CCGG 8 cut(s) 148, 550, 584, 705, 741, 746, 761, 771
BslFI GGGAC 1 cut(s) 121
BslI CCNNNNNNNGG 5 cut(s) 107, 590, 873, 1475, 1912
BsmAI GTCTC 5 cut(s) 180, 225, 512, 529, 1459
BsmBI CGTCTC 2 cut(s) 225, 529
BsmFI GGGAC 1 cut(s) 121
BsnI GGCC 8 cut(s) 29, 111, 291, 407, 622, 759, 1431, 1591
Bso31I GGTCTC 1 cut(s) 1459
Bsp120I GGGCCC 1 cut(s) 620
Bsp1286I GDGCHC 4 cut(s) 489, 624, 1109, 1532
Bsp143I GATC 9 cut(s) 355, 512, 552, 653, 726, 1060, 1861, 1867, 1939
BspANI GGCC 8 cut(s) 29, 111, 291, 407, 622, 759, 1431, 1591
BspCNI CTCAG 6 cut(s) 107, 472, 850, 1231, 1261, 1871
BspDI ATCGAT 2 cut(s) 729, 1007
BspHI TCATGA 1 cut(s) 1864
BspLI GGNNCC 6 cut(s) 621, 622, 623, 739, 1529, 1941
BspPI GGATC 6 cut(s) 560, 661, 734, 1068, 1934, 1947
BspT107I GGYRCC 1 cut(s) 737
BspTNI GGTCTC 1 cut(s) 1459
BsrBI CCGCTC 1 cut(s) 520
BsrDI GCAATG 2 cut(s) 1432, 1818
BsrFI RCCGGY 3 cut(s) 147, 583, 745
BsrI ACTGG 3 cut(s) 133, 172, 504
BssAI RCCGGY 3 cut(s) 147, 583, 745
BssECI CCNNGG 6 cut(s) 24, 589, 867, 1532, 1905, 1952
BssMI GATC 9 cut(s) 355, 512, 552, 653, 726, 1060, 1861, 1867, 1939
BssNAI GTATAC 1 cut(s) 1149
BssNI GRCGYC 2 cut(s) 384, 738
BssT1I CCWWGG 2 cut(s) 867, 1532
Bst1107I GTATAC 1 cut(s) 1149
Bst2UI CCWGG 5 cut(s) 672, 887, 1132, 1393, 1907
Bst4CI ACNGT 3 cut(s) 779, 1357, 1408
Bst6I CTCTTC 1 cut(s) 1202
BstACI GRCGYC 2 cut(s) 384, 738
BstAPI GCANNNNNTGC 1 cut(s) 1808
BstC8I GCNNGC 5 cut(s) 153, 489, 810, 827, 852
BstDEI CTNAG 7 cut(s) 94, 459, 837, 1035, 1239, 1269, 1858
BstDSI CCRYGG 3 cut(s) 24, 589, 1952
BstF5I GGATG 6 cut(s) 243, 258, 802, 1033, 1636, 1919
BstH2I RGCGCY 2 cut(s) 741, 767
BstHHI GCGC 2 cut(s) 740, 766
BstKTI GATC 9 cut(s) 358, 515, 555, 656, 729, 1063, 1864, 1870, 1942
BstMAI GTCTC 5 cut(s) 180, 225, 512, 529, 1459
BstMBI GATC 9 cut(s) 355, 512, 552, 653, 726, 1060, 1861, 1867, 1939
BstMCI CGRYCG 4 cut(s) 148, 515, 550, 750
BstNI CCWGG 5 cut(s) 672, 887, 1132, 1393, 1907
BstNSI RCATGY 3 cut(s) 959, 1327, 1754
BstPAI GACNNNNGTC 1 cut(s) 435
BstSCI CCNGG 7 cut(s) 670, 704, 759, 885, 1130, 1391, 1905
BstSFI CTRYAG 1 cut(s) 1686
BstSLI GKGCMC 1 cut(s) 624
BstV1I GCAGC 5 cut(s) 705, 1320, 1409, 1621, 1696
BstX2I RGATCY 2 cut(s) 653, 1939
BstXI CCANNNNNNTGG 2 cut(s) 688, 1953
BstYI RGATCY 2 cut(s) 653, 1939
BstZ17I GTATAC 1 cut(s) 1149
Bsu15I ATCGAT 2 cut(s) 729, 1007
Bsu36I CCTNAGG 1 cut(s) 1269
BsuRI GGCC 8 cut(s) 29, 111, 291, 407, 622, 759, 1431, 1591
BsuTUI ATCGAT 2 cut(s) 729, 1007
BtgI CCRYGG 3 cut(s) 24, 589, 1952
BtrI CACGTC 2 cut(s) 277, 367
BtsCI GGATG 6 cut(s) 243, 258, 802, 1033, 1636, 1919
BtsI GCAGTG 2 cut(s) 1389, 1983
BtsIMutI CAGTG 2 cut(s) 1389, 1983
Cac8I GCNNGC 5 cut(s) 153, 489, 810, 827, 852
CaiI CAGNNNCTG 1 cut(s) 1808
CciI TCATGA 1 cut(s) 1864
CfoI GCGC 2 cut(s) 740, 766
Cfr10I RCCGGY 3 cut(s) 147, 583, 745
ClaI ATCGAT 2 cut(s) 729, 1007
CpoI CGGWCCG 2 cut(s) 712, 743
CseI GACGC 1 cut(s) 392
CsiI ACCWGGT 1 cut(s) 885
Csp6I GTAC 3 cut(s) 1622, 1763, 1786
CspAI ACCGGT 1 cut(s) 745
CspI CGGWCCG 2 cut(s) 712, 743
CviAII CATG 9 cut(s) 13, 956, 1324, 1436, 1563, 1715, 1751, 1865, 1898
CviQI GTAC 3 cut(s) 1622, 1763, 1786
DdeI CTNAG 7 cut(s) 94, 459, 837, 1035, 1239, 1269, 1858
DinI GGCGCC 1 cut(s) 739
DpnI GATC 9 cut(s) 357, 514, 554, 655, 728, 1062, 1863, 1869, 1941
DpnII GATC 9 cut(s) 355, 512, 552, 653, 726, 1060, 1861, 1867, 1939
DraIII CACNNNGTG 2 cut(s) 684, 1718
EaeI YGGCCR 3 cut(s) 27, 405, 1429
Eam1104I CTCTTC 1 cut(s) 1202
EarI CTCTTC 1 cut(s) 1202
EciI GGCGGA 6 cut(s) 10, 182, 269, 301, 328, 869
Ecl136II GAGCTC 1 cut(s) 487
Eco130I CCWWGG 2 cut(s) 867, 1532
Eco24I GRGCYC 3 cut(s) 489, 624, 1532
Eco31I GGTCTC 1 cut(s) 1459
Eco47I GGWCC 7 cut(s) 586, 702, 712, 743, 1017, 1389, 1854
Eco53kI GAGCTC 1 cut(s) 487
Eco81I CCTNAGG 1 cut(s) 1269
EcoICRI GAGCTC 1 cut(s) 487
EcoO109I RGGNCCY 4 cut(s) 620, 621, 1017, 1854
EcoRI GAATTC 2 cut(s) 912, 931
EcoRII CCWGG 5 cut(s) 670, 885, 1130, 1391, 1905
EcoT14I CCWWGG 2 cut(s) 867, 1532
EcoT38I GRGCYC 3 cut(s) 489, 624, 1532
EgeI GGCGCC 1 cut(s) 739
EheI GGCGCC 1 cut(s) 739
ErhI CCWWGG 2 cut(s) 867, 1532
Esp3I CGTCTC 2 cut(s) 225, 529
FaeI CATG 9 cut(s) 16, 959, 1327, 1439, 1566, 1718, 1754, 1868, 1901
FalI AAGNNNNNCTT 2 cut(s) 551, 583
FaqI GGGAC 1 cut(s) 121
FatI CATG 9 cut(s) 12, 955, 1323, 1435, 1562, 1714, 1750, 1864, 1897
FauI CCCGC 4 cut(s) 146, 385, 508, 1252
FauNDI CATATG 1 cut(s) 1518
FblI GTMKAC 2 cut(s) 750, 1148
Fnu4HI GCNGC 9 cut(s) 387, 518, 694, 813, 1334, 1423, 1432, 1635, 1710
FokI GGATG 6 cut(s) 230, 245, 789, 1040, 1643, 1906
FriOI GRGCYC 3 cut(s) 489, 624, 1532
Fsp4HI GCNGC 9 cut(s) 387, 518, 694, 813, 1334, 1423, 1432, 1635, 1710
FspBI CTAG 3 cut(s) 476, 1533, 2010
GlaI GCGC 2 cut(s) 739, 765
GluI GCNGC 9 cut(s) 387, 518, 694, 813, 1334, 1423, 1432, 1635, 1710
HaeII RGCGCY 2 cut(s) 741, 767
HaeIII GGCC 8 cut(s) 29, 111, 291, 407, 622, 759, 1431, 1591
HapII CCGG 8 cut(s) 148, 550, 584, 705, 741, 746, 761, 771
HgaI GACGC 1 cut(s) 392
HhaI GCGC 2 cut(s) 740, 766
Hin1I GRCGYC 2 cut(s) 384, 738
Hin1II CATG 9 cut(s) 16, 959, 1327, 1439, 1566, 1718, 1754, 1868, 1901
Hin6I GCGC 2 cut(s) 738, 764
HinP1I GCGC 2 cut(s) 738, 764
HincII GTYRAC 1 cut(s) 751
HindII GTYRAC 1 cut(s) 751
HpaII CCGG 8 cut(s) 148, 550, 584, 705, 741, 746, 761, 771
Hpy166II GTNNAC 5 cut(s) 589, 598, 751, 1149, 1443
Hpy188III TCNNGA 7 cut(s) 571, 1078, 1268, 1697, 1735, 1865, 2010
Hpy8I GTNNAC 5 cut(s) 589, 598, 751, 1149, 1443
Hpy99I CGWCG 4 cut(s) 290, 386, 533, 779
HpyAV CCTTC 9 cut(s) 130, 178, 303, 307, 312, 340, 835, 1621, 1997
HpyCH4III ACNGT 3 cut(s) 779, 1357, 1408
HpyCH4IV ACGT 5 cut(s) 276, 366, 1178, 1547, 1741
HpyCH4V TGCA 7 cut(s) 820, 1216, 1382, 1425, 1712, 1811, 1976
HpyF3I CTNAG 7 cut(s) 94, 459, 837, 1035, 1239, 1269, 1858
HpySE526I ACGT 5 cut(s) 276, 366, 1178, 1547, 1741
Hsp92I GRCGYC 2 cut(s) 384, 738
Hsp92II CATG 9 cut(s) 16, 959, 1327, 1439, 1566, 1718, 1754, 1868, 1901
HspAI GCGC 2 cut(s) 738, 764
KasI GGCGCC 1 cut(s) 737
Kzo9I GATC 9 cut(s) 355, 512, 552, 653, 726, 1060, 1861, 1867, 1939
LmnI GCTCC 3 cut(s) 1456, 1527, 1737
Lsp1109I GCAGC 5 cut(s) 705, 1320, 1409, 1621, 1696
LweI GCATC 3 cut(s) 1225, 1621, 1928
MabI ACCWGGT 1 cut(s) 885
MaeI CTAG 3 cut(s) 476, 1533, 2010
MaeII ACGT 5 cut(s) 276, 366, 1178, 1547, 1741
MaeIII GTNAC 3 cut(s) 437, 659, 1815
MalI GATC 9 cut(s) 357, 514, 554, 655, 728, 1062, 1863, 1869, 1941
MbiI CCGCTC 1 cut(s) 520
MboI GATC 9 cut(s) 355, 512, 552, 653, 726, 1060, 1861, 1867, 1939
MboII GAAGA 4 cut(s) 884, 1219, 1286, 1771
MflI RGATCY 2 cut(s) 653, 1939
MhlI GDGCHC 4 cut(s) 489, 624, 1109, 1532
MluCI AATT 9 cut(s) 102, 912, 931, 1081, 1141, 1666, 1774, 1910, 2045
Mly113I GGCGCC 1 cut(s) 738
MlyI GAGTC 8 cut(s) 158, 386, 533, 656, 1196, 1226, 1507, 1573
MmeI TCCRAC 2 cut(s) 183, 690
MroXI GAANNNNTTC 1 cut(s) 1778
MseI TTAA 1 cut(s) 1140
MslI CAYNNNNRTG 3 cut(s) 11, 960, 1951
MspA1I CMGCKG 1 cut(s) 808
MspI CCGG 8 cut(s) 148, 550, 584, 705, 741, 746, 761, 771
MspR9I CCNGG 7 cut(s) 672, 706, 761, 887, 1132, 1393, 1907
MvaI CCWGG 5 cut(s) 672, 887, 1132, 1393, 1907
NarI GGCGCC 1 cut(s) 738
NciI CCSGG 2 cut(s) 706, 761
NdeI CATATG 1 cut(s) 1518
NdeII GATC 9 cut(s) 355, 512, 552, 653, 726, 1060, 1861, 1867, 1939
NlaIII CATG 9 cut(s) 16, 959, 1327, 1439, 1566, 1718, 1754, 1868, 1901
NlaIV GGNNCC 6 cut(s) 621, 622, 623, 739, 1529, 1941
NmeAIII GCCGAG 1 cut(s) 87
NmuCI GTSAC 3 cut(s) 437, 659, 1815
NspI RCATGY 3 cut(s) 959, 1327, 1754
PagI TCATGA 1 cut(s) 1864
PciI ACATGT 2 cut(s) 955, 1750
PcsI WCGNNNNNNNCGW 6 cut(s) 282, 543, 1106, 1142, 1151, 1184
PdmI GAANNNNTTC 1 cut(s) 1778
PfeI GAWTC 2 cut(s) 983, 1700
PflFI GACNNNGTC 2 cut(s) 706, 779
PflMI CCANNNNNTGG 2 cut(s) 1475, 1912
PinAI ACCGGT 1 cut(s) 745
PkrI GCNGC 9 cut(s) 388, 519, 695, 814, 1335, 1424, 1433, 1636, 1711
Ple19I CGATCG 1 cut(s) 515
PleI GAGTC 8 cut(s) 158, 386, 533, 656, 1196, 1226, 1507, 1573
PluTI GGCGCC 1 cut(s) 741
PpsI GAGTC 8 cut(s) 158, 386, 533, 656, 1196, 1226, 1507, 1573
PpuMI RGGWCCY 2 cut(s) 1017, 1854
PscI ACATGT 2 cut(s) 955, 1750
PshAI GACNNNNGTC 1 cut(s) 435
PshBI ATTAAT 1 cut(s) 1140
PsiI TTATAA 1 cut(s) 1086
Psp124BI GAGCTC 1 cut(s) 489
Psp5II RGGWCCY 2 cut(s) 1017, 1854
Psp6I CCWGG 5 cut(s) 670, 885, 1130, 1391, 1905
PspGI CCWGG 5 cut(s) 670, 885, 1130, 1391, 1905
PspN4I GGNNCC 6 cut(s) 621, 622, 623, 739, 1529, 1941
PspOMI GGGCCC 1 cut(s) 620
PspPPI RGGWCCY 2 cut(s) 1017, 1854
PstNI CAGNNNCTG 1 cut(s) 1808
PsuI RGATCY 2 cut(s) 653, 1939
PsyI GACNNNGTC 2 cut(s) 706, 779
PvuI CGATCG 1 cut(s) 515
RsaI GTAC 3 cut(s) 1623, 1764, 1787
RsaNI GTAC 3 cut(s) 1622, 1763, 1786
RseI CAYNNNNRTG 3 cut(s) 11, 960, 1951
Rsr2I CGGWCCG 2 cut(s) 712, 743
RsrII CGGWCCG 2 cut(s) 712, 743
SacI GAGCTC 1 cut(s) 489
SalI GTCGAC 1 cut(s) 749
SaqAI TTAA 1 cut(s) 1140
SatI GCNGC 9 cut(s) 387, 518, 694, 813, 1334, 1423, 1432, 1635, 1710
Sau3AI GATC 9 cut(s) 355, 512, 552, 653, 726, 1060, 1861, 1867, 1939
SchI GAGTC 8 cut(s) 158, 386, 533, 656, 1196, 1226, 1507, 1573
ScrFI CCNGG 7 cut(s) 672, 706, 761, 887, 1132, 1393, 1907
SduI GDGCHC 4 cut(s) 489, 624, 1109, 1532
SexAI ACCWGGT 1 cut(s) 885
SfaNI GCATC 3 cut(s) 1225, 1621, 1928
SfcI CTRYAG 1 cut(s) 1686
SfoI GGCGCC 1 cut(s) 739
SinI GGWCC 7 cut(s) 586, 702, 712, 743, 1017, 1389, 1854
SmiMI CAYNNNNRTG 3 cut(s) 11, 960, 1951
SmlI CTYRAG 1 cut(s) 1460
SmoI CTYRAG 1 cut(s) 1460
Sse9I AATT 9 cut(s) 102, 912, 931, 1081, 1141, 1666, 1774, 1910, 2045
SspDI GGCGCC 1 cut(s) 737
SspMI CTAG 3 cut(s) 476, 1533, 2010
SstI GAGCTC 1 cut(s) 489
StyD4I CCNGG 7 cut(s) 670, 704, 759, 885, 1130, 1391, 1905
StyI CCWWGG 2 cut(s) 867, 1532
TaaI ACNGT 3 cut(s) 779, 1357, 1408
TaiI ACGT 5 cut(s) 279, 369, 1181, 1550, 1744
TasI AATT 9 cut(s) 102, 912, 931, 1081, 1141, 1666, 1774, 1910, 2045
TatI WGTACW 1 cut(s) 1785
TauI GCSGC 4 cut(s) 389, 520, 815, 1434
TfiI GAWTC 2 cut(s) 983, 1700
Tru1I TTAA 1 cut(s) 1140
Tru9I TTAA 1 cut(s) 1140
TscAI CASTG 2 cut(s) 1389, 1983
TseFI GTSAC 3 cut(s) 437, 659, 1815
TseI GCWGC 5 cut(s) 693, 1333, 1422, 1634, 1709
Tsp45I GTSAC 3 cut(s) 437, 659, 1815
TspDTI ATGAA 3 cut(s) 791, 1107, 1596
TspGWI ACGGA 2 cut(s) 517, 1941
TspRI CASTG 2 cut(s) 1389, 1983
Tth111I GACNNNGTC 2 cut(s) 706, 779
Van91I CCANNNNNTGG 2 cut(s) 1475, 1912
VpaK11BI GGWCC 7 cut(s) 586, 702, 712, 743, 1017, 1389, 1854
VspI ATTAAT 1 cut(s) 1140
XapI RAATTY 3 cut(s) 912, 931, 1774
XbaI TCTAGA 1 cut(s) 2009
XceI RCATGY 3 cut(s) 959, 1327, 1754
XcmI CCANNNNNNNNNTGG 1 cut(s) 1950
XmaJI CCTAGG 1 cut(s) 1532
XmiI GTMKAC 2 cut(s) 750, 1148
XmnI GAANNNNTTC 1 cut(s) 1778
XspI CTAG 3 cut(s) 476, 1533, 2010
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.