DNA polymerase epsilon subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G27470 |
| fragaria_vesca | FvH4_3g24950 FvH4_3g24950 |
| malus_domestica | MD11G1164600.v1.1 |
| prunus_persica | Prupe.6G130500_v2.0.a1 |
| pyrus_communis | pycom11g13690 |
| rosa_chinensis | RchiOBHm_Chr5g0044741 |
| rosa_laevigata | RLG00000009305 RLG00000019693 RLG00000023195 RLG00000034295 |
| rosa_multiflora | Rmu_sc0000228.1_g000014 Rmu_sc0002642.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00036290 |
| rosa_rugosa | Rorug05G0217200 |
| rosa_samantha | Rh2CG347200 Rh5AG300600 Rh5BG307300 Rh5CG334400 Rh5DG317400 |
| rosa_wichuraiana | Rw5G027810 Rw5G027850 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 236, 239 |
| AcuI | CTGAAG | 1 cut(s) | 128 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 292 |
| AgsI | TTSAA | 2 cut(s) | 64, 122 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 209, 241 |
| AluBI | AGCT | 1 cut(s) | 321 |
| AluI | AGCT | 1 cut(s) | 321 |
| Ama87I | CYCGRG | 1 cut(s) | 89 |
| AoxI | GGCC | 1 cut(s) | 111 |
| AspLEI | GCGC | 1 cut(s) | 311 |
| AsuNHI | GCTAGC | 1 cut(s) | 311 |
| AvaI | CYCGRG | 1 cut(s) | 89 |
| BccI | CCATC | 1 cut(s) | 290 |
| BceAI | ACGGC | 1 cut(s) | 322 |
| BfaI | CTAG | 1 cut(s) | 312 |
| BfoI | RGCGCY | 1 cut(s) | 312 |
| BisI | GCNGC | 2 cut(s) | 236, 239 |
| BlsI | GCNGC | 2 cut(s) | 237, 240 |
| BmeT110I | CYCGRG | 1 cut(s) | 89 |
| BmsI | GCATC | 1 cut(s) | 14 |
| BmtI | GCTAGC | 1 cut(s) | 315 |
| Bpu10I | CCTNAGC | 1 cut(s) | 128 |
| BsaJI | CCNNGG | 1 cut(s) | 243 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 292 |
| BseDI | CCNNGG | 1 cut(s) | 243 |
| BseGI | GGATG | 1 cut(s) | 301 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 292 |
| BseYI | CCCAGC | 1 cut(s) | 143 |
| BshFI | GGCC | 1 cut(s) | 113 |
| BsiHKCI | CYCGRG | 1 cut(s) | 89 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 292 |
| BsmI | GAATGC | 1 cut(s) | 145 |
| BsnI | GGCC | 1 cut(s) | 113 |
| BsoBI | CYCGRG | 1 cut(s) | 89 |
| Bsp143I | GATC | 1 cut(s) | 42 |
| BspACI | CCGC | 2 cut(s) | 236, 239 |
| BspANI | GGCC | 1 cut(s) | 113 |
| BspOI | GCTAGC | 1 cut(s) | 315 |
| BssECI | CCNNGG | 1 cut(s) | 243 |
| BssMI | GATC | 1 cut(s) | 42 |
| BssT1I | CCWWGG | 1 cut(s) | 243 |
| Bst6I | CTCTTC | 4 cut(s) | 212, 243, 255, 267 |
| BstC8I | GCNNGC | 1 cut(s) | 313 |
| BstDEI | CTNAG | 1 cut(s) | 128 |
| BstF5I | GGATG | 1 cut(s) | 301 |
| BstH2I | RGCGCY | 1 cut(s) | 312 |
| BstHHI | GCGC | 1 cut(s) | 311 |
| BstKTI | GATC | 1 cut(s) | 45 |
| BstMBI | GATC | 1 cut(s) | 42 |
| BsuRI | GGCC | 1 cut(s) | 113 |
| BtsCI | GGATG | 1 cut(s) | 301 |
| Cac8I | GCNNGC | 1 cut(s) | 313 |
| CfoI | GCGC | 1 cut(s) | 311 |
| CviAII | CATG | 1 cut(s) | 17 |
| CviJI | RGCY | 4 cut(s) | 103, 113, 127, 321 |
| CviKI_1 | RGCY | 4 cut(s) | 103, 113, 127, 321 |
| DdeI | CTNAG | 1 cut(s) | 128 |
| DpnI | GATC | 1 cut(s) | 44 |
| DpnII | GATC | 1 cut(s) | 42 |
| Eam1104I | CTCTTC | 4 cut(s) | 212, 243, 255, 267 |
| EarI | CTCTTC | 4 cut(s) | 212, 243, 255, 267 |
| Eco130I | CCWWGG | 1 cut(s) | 243 |
| Eco147I | AGGCCT | 1 cut(s) | 113 |
| Eco57I | CTGAAG | 1 cut(s) | 128 |
| Eco88I | CYCGRG | 1 cut(s) | 89 |
| EcoT14I | CCWWGG | 1 cut(s) | 243 |
| EcoT22I | ATGCAT | 1 cut(s) | 18 |
| ErhI | CCWWGG | 1 cut(s) | 243 |
| FaeI | CATG | 1 cut(s) | 20 |
| FaiI | YATR | 1 cut(s) | 18 |
| FatI | CATG | 1 cut(s) | 16 |
| Fnu4HI | GCNGC | 2 cut(s) | 236, 239 |
| FokI | GGATG | 1 cut(s) | 308 |
| Fsp4HI | GCNGC | 2 cut(s) | 236, 239 |
| FspBI | CTAG | 1 cut(s) | 312 |
| GlaI | GCGC | 1 cut(s) | 310 |
| GluI | GCNGC | 2 cut(s) | 236, 239 |
| GsaI | CCCAGC | 1 cut(s) | 147 |
| HaeII | RGCGCY | 1 cut(s) | 312 |
| HaeIII | GGCC | 1 cut(s) | 113 |
| HhaI | GCGC | 1 cut(s) | 311 |
| Hin1II | CATG | 1 cut(s) | 20 |
| Hin6I | GCGC | 1 cut(s) | 309 |
| HinP1I | GCGC | 1 cut(s) | 309 |
| HindIII | AAGCTT | 1 cut(s) | 319 |
| HinfI | GANTC | 1 cut(s) | 20 |
| Hpy188I | TCNGA | 1 cut(s) | 108 |
| Hpy188III | TCNNGA | 2 cut(s) | 89, 119 |
| Hpy99I | CGWCG | 1 cut(s) | 308 |
| HpyAV | CCTTC | 4 cut(s) | 58, 103, 116, 145 |
| HpyCH4V | TGCA | 1 cut(s) | 16 |
| HpyF3I | CTNAG | 1 cut(s) | 128 |
| Hsp92II | CATG | 1 cut(s) | 20 |
| HspAI | GCGC | 1 cut(s) | 309 |
| Kzo9I | GATC | 1 cut(s) | 42 |
| LpnPI | CCDG | 2 cut(s) | 129, 141 |
| LweI | GCATC | 1 cut(s) | 14 |
| MaeI | CTAG | 1 cut(s) | 312 |
| MalI | GATC | 1 cut(s) | 44 |
| MboI | GATC | 1 cut(s) | 42 |
| MluCI | AATT | 1 cut(s) | 224 |
| MlyI | GAGTC | 1 cut(s) | 14 |
| MmeI | TCCRAC | 1 cut(s) | 51 |
| MnlI | CCTC | 9 cut(s) | 67, 114, 124, 184, 213, 244, 256, 268, 286 |
| Mph1103I | ATGCAT | 1 cut(s) | 18 |
| Mva1269I | GAATGC | 1 cut(s) | 145 |
| NdeII | GATC | 1 cut(s) | 42 |
| NheI | GCTAGC | 1 cut(s) | 311 |
| NlaIII | CATG | 1 cut(s) | 20 |
| NsiI | ATGCAT | 1 cut(s) | 18 |
| PceI | AGGCCT | 1 cut(s) | 113 |
| PctI | GAATGC | 1 cut(s) | 145 |
| PkrI | GCNGC | 2 cut(s) | 237, 240 |
| PleI | GAGTC | 1 cut(s) | 14 |
| PpsI | GAGTC | 1 cut(s) | 14 |
| PspFI | CCCAGC | 1 cut(s) | 143 |
| SatI | GCNGC | 2 cut(s) | 236, 239 |
| Sau3AI | GATC | 1 cut(s) | 42 |
| SchI | GAGTC | 1 cut(s) | 14 |
| SetI | ASST | 1 cut(s) | 323 |
| SfaNI | GCATC | 1 cut(s) | 14 |
| SmlI | CTYRAG | 1 cut(s) | 322 |
| SmoI | CTYRAG | 1 cut(s) | 322 |
| Sse9I | AATT | 1 cut(s) | 224 |
| SseBI | AGGCCT | 1 cut(s) | 113 |
| SsiI | CCGC | 2 cut(s) | 236, 239 |
| SspMI | CTAG | 1 cut(s) | 312 |
| StuI | AGGCCT | 1 cut(s) | 113 |
| StyI | CCWWGG | 1 cut(s) | 243 |
| TaqI | TCGA | 1 cut(s) | 99 |
| TasI | AATT | 1 cut(s) | 224 |
| TauI | GCSGC | 2 cut(s) | 238, 241 |
| TspDTI | ATGAA | 2 cut(s) | 85, 152 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 293 |
| XspI | CTAG | 1 cut(s) | 312 |
| Zsp2I | ATGCAT | 1 cut(s) | 18 |