DNA polymerase epsilon subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G27470 |
| fragaria_vesca | FvH4_3g24950 FvH4_3g24950 |
| malus_domestica | MD11G1164600.v1.1 |
| prunus_persica | Prupe.6G130500_v2.0.a1 |
| pyrus_communis | pycom11g13690 |
| rosa_chinensis | RchiOBHm_Chr5g0044741 |
| rosa_laevigata | RLG00000009305 RLG00000019693 RLG00000023195 RLG00000034295 |
| rosa_multiflora | Rmu_sc0000228.1_g000014 Rmu_sc0002642.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00036290 |
| rosa_rugosa | Rorug05G0217200 |
| rosa_samantha | Rh2CG347200 Rh5AG300600 Rh5BG307300 Rh5CG334400 Rh5DG317400 |
| rosa_wichuraiana | Rw5G027810 Rw5G027850 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 89 |
| AciI | CCGC | 4 cut(s) | 11, 111, 130, 153 |
| AclWI | GGATC | 1 cut(s) | 187 |
| AcuI | CTGAAG | 1 cut(s) | 281 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 418 |
| AgsI | TTSAA | 3 cut(s) | 217, 275, 398 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 347, 379 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 221, 253 |
| AluBI | AGCT | 3 cut(s) | 16, 55, 104 |
| AluI | AGCT | 3 cut(s) | 16, 55, 104 |
| Alw21I | GWGCWC | 1 cut(s) | 68 |
| AlwI | GGATC | 1 cut(s) | 187 |
| Ama87I | CYCGRG | 1 cut(s) | 448 |
| AoxI | GGCC | 1 cut(s) | 264 |
| ApeKI | GCWGC | 1 cut(s) | 16 |
| AspLEI | GCGC | 2 cut(s) | 36, 128 |
| AsuC2I | CCSGG | 1 cut(s) | 242 |
| AsuHPI | GGTGA | 2 cut(s) | 55, 100 |
| AvaI | CYCGRG | 1 cut(s) | 448 |
| Bbv12I | GWGCWC | 1 cut(s) | 68 |
| BbvCI | CCTCAGC | 1 cut(s) | 281 |
| BbvI | GCAGC | 1 cut(s) | 3 |
| BccI | CCATC | 1 cut(s) | 416 |
| BceAI | ACGGC | 3 cut(s) | 21, 24, 94 |
| BcnI | CCSGG | 1 cut(s) | 242 |
| BfoI | RGCGCY | 1 cut(s) | 129 |
| BisI | GCNGC | 1 cut(s) | 17 |
| BlsI | GCNGC | 1 cut(s) | 18 |
| Bme1390I | CCNGG | 1 cut(s) | 242 |
| BmeT110I | CYCGRG | 1 cut(s) | 448 |
| BmrFI | CCNGG | 1 cut(s) | 242 |
| BmsI | GCATC | 1 cut(s) | 141 |
| Bpu10I | CCTNAGC | 1 cut(s) | 281 |
| BpuMI | CCSGG | 1 cut(s) | 242 |
| BsaJI | CCNNGG | 1 cut(s) | 381 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 134, 164 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 418 |
| Bse3DI | GCAATG | 1 cut(s) | 436 |
| BseDI | CCNNGG | 1 cut(s) | 381 |
| BseGI | GGATG | 2 cut(s) | 138, 427 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 418 |
| BseMI | GCAATG | 1 cut(s) | 436 |
| BseMII | CTCAG | 1 cut(s) | 272 |
| BseXI | GCAGC | 1 cut(s) | 3 |
| BseYI | CCCAGC | 1 cut(s) | 296 |
| BshFI | GGCC | 1 cut(s) | 266 |
| BsiHKAI | GWGCWC | 1 cut(s) | 68 |
| BsiHKCI | CYCGRG | 1 cut(s) | 448 |
| BsiSI | CCGG | 1 cut(s) | 242 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 418 |
| BsmI | GAATGC | 1 cut(s) | 298 |
| BsnI | GGCC | 1 cut(s) | 266 |
| BsoBI | CYCGRG | 1 cut(s) | 448 |
| Bsp1286I | GDGCHC | 1 cut(s) | 68 |
| Bsp143I | GATC | 2 cut(s) | 179, 195 |
| BspACI | CCGC | 4 cut(s) | 11, 111, 130, 153 |
| BspANI | GGCC | 1 cut(s) | 266 |
| BspCNI | CTCAG | 1 cut(s) | 273 |
| BspPI | GGATC | 1 cut(s) | 187 |
| BspQI | GCTCTTC | 1 cut(s) | 363 |
| BsrDI | GCAATG | 1 cut(s) | 436 |
| BssECI | CCNNGG | 1 cut(s) | 381 |
| BssMI | GATC | 2 cut(s) | 179, 195 |
| BssT1I | CCWWGG | 1 cut(s) | 381 |
| Bst6I | CTCTTC | 5 cut(s) | 179, 350, 363, 381, 393 |
| BstC8I | GCNNGC | 1 cut(s) | 130 |
| BstDEI | CTNAG | 1 cut(s) | 281 |
| BstF5I | GGATG | 2 cut(s) | 138, 427 |
| BstH2I | RGCGCY | 1 cut(s) | 129 |
| BstHHI | GCGC | 2 cut(s) | 36, 128 |
| BstKTI | GATC | 2 cut(s) | 182, 198 |
| BstMBI | GATC | 2 cut(s) | 179, 195 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 72, 110, 329 |
| BstSCI | CCNGG | 1 cut(s) | 240 |
| BstV1I | GCAGC | 1 cut(s) | 3 |
| BsuRI | GGCC | 1 cut(s) | 266 |
| BtsCI | GGATG | 2 cut(s) | 138, 427 |
| Cac8I | GCNNGC | 1 cut(s) | 130 |
| CfoI | GCGC | 2 cut(s) | 36, 128 |
| CviJI | RGCY | 8 cut(s) | 16, 55, 104, 161, 256, 266, 280, 373 |
| CviKI_1 | RGCY | 8 cut(s) | 16, 55, 104, 161, 256, 266, 280, 373 |
| DdeI | CTNAG | 1 cut(s) | 281 |
| DpnI | GATC | 2 cut(s) | 181, 197 |
| DpnII | GATC | 2 cut(s) | 179, 195 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 89 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 89 |
| Eam1104I | CTCTTC | 5 cut(s) | 179, 350, 363, 381, 393 |
| EarI | CTCTTC | 5 cut(s) | 179, 350, 363, 381, 393 |
| EciI | GGCGGA | 2 cut(s) | 26, 142 |
| Eco130I | CCWWGG | 1 cut(s) | 381 |
| Eco147I | AGGCCT | 1 cut(s) | 266 |
| Eco57I | CTGAAG | 1 cut(s) | 281 |
| Eco88I | CYCGRG | 1 cut(s) | 448 |
| EcoT14I | CCWWGG | 1 cut(s) | 381 |
| ErhI | CCWWGG | 1 cut(s) | 381 |
| FauI | CCCGC | 1 cut(s) | 137 |
| Fnu4HI | GCNGC | 1 cut(s) | 17 |
| FokI | GGATG | 2 cut(s) | 125, 434 |
| Fsp4HI | GCNGC | 1 cut(s) | 17 |
| GlaI | GCGC | 2 cut(s) | 35, 127 |
| GluI | GCNGC | 1 cut(s) | 17 |
| GsaI | CCCAGC | 1 cut(s) | 300 |
| HaeII | RGCGCY | 1 cut(s) | 129 |
| HaeIII | GGCC | 1 cut(s) | 266 |
| HapII | CCGG | 1 cut(s) | 242 |
| HhaI | GCGC | 2 cut(s) | 36, 128 |
| Hin6I | GCGC | 2 cut(s) | 34, 126 |
| HinP1I | GCGC | 2 cut(s) | 34, 126 |
| HpaII | CCGG | 1 cut(s) | 242 |
| HphI | GGTGA | 2 cut(s) | 55, 100 |
| Hpy166II | GTNNAC | 1 cut(s) | 94 |
| Hpy188I | TCNGA | 3 cut(s) | 61, 121, 261 |
| Hpy188III | TCNNGA | 1 cut(s) | 272 |
| Hpy8I | GTNNAC | 1 cut(s) | 94 |
| Hpy99I | CGWCG | 4 cut(s) | 80, 209, 212, 254 |
| HpyAV | CCTTC | 6 cut(s) | 40, 124, 211, 256, 269, 298 |
| HpyCH4IV | ACGT | 2 cut(s) | 90, 210 |
| HpyCH4V | TGCA | 1 cut(s) | 174 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 72, 110, 329 |
| HpyF3I | CTNAG | 1 cut(s) | 281 |
| HpySE526I | ACGT | 2 cut(s) | 90, 210 |
| HspAI | GCGC | 2 cut(s) | 34, 126 |
| Kzo9I | GATC | 2 cut(s) | 179, 195 |
| LguI | GCTCTTC | 1 cut(s) | 363 |
| LmnI | GCTCC | 2 cut(s) | 13, 71 |
| LpnPI | CCDG | 4 cut(s) | 98, 255, 282, 294 |
| Lsp1109I | GCAGC | 1 cut(s) | 3 |
| LweI | GCATC | 1 cut(s) | 141 |
| MaeII | ACGT | 2 cut(s) | 90, 210 |
| MalI | GATC | 2 cut(s) | 181, 197 |
| MboI | GATC | 2 cut(s) | 179, 195 |
| MboII | GAAGA | 9 cut(s) | 127, 196, 301, 313, 367, 380, 398, 410, 416 |
| MhlI | GDGCHC | 1 cut(s) | 68 |
| MluCI | AATT | 1 cut(s) | 362 |
| MmeI | TCCRAC | 1 cut(s) | 204 |
| MspI | CCGG | 1 cut(s) | 242 |
| MspR9I | CCNGG | 1 cut(s) | 242 |
| Mva1269I | GAATGC | 1 cut(s) | 298 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 72, 110, 329 |
| NciI | CCSGG | 1 cut(s) | 242 |
| NdeII | GATC | 2 cut(s) | 179, 195 |
| PaeR7I | CTCGAG | 1 cut(s) | 448 |
| PceI | AGGCCT | 1 cut(s) | 266 |
| PciSI | GCTCTTC | 1 cut(s) | 363 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 207 |
| PctI | GAATGC | 1 cut(s) | 298 |
| PfoI | TCCNGGA | 1 cut(s) | 240 |
| PkrI | GCNGC | 1 cut(s) | 18 |
| PspFI | CCCAGC | 1 cut(s) | 296 |
| PspXI | VCTCGAGB | 1 cut(s) | 448 |
| SapI | GCTCTTC | 1 cut(s) | 363 |
| SatI | GCNGC | 1 cut(s) | 17 |
| Sau3AI | GATC | 2 cut(s) | 179, 195 |
| ScrFI | CCNGG | 1 cut(s) | 242 |
| SduI | GDGCHC | 1 cut(s) | 68 |
| SetI | ASST | 7 cut(s) | 18, 57, 87, 93, 106, 150, 213 |
| SfaNI | GCATC | 1 cut(s) | 141 |
| Sfr274I | CTCGAG | 1 cut(s) | 448 |
| SlaI | CTCGAG | 1 cut(s) | 448 |
| SmlI | CTYRAG | 1 cut(s) | 448 |
| SmoI | CTYRAG | 1 cut(s) | 448 |
| Sse9I | AATT | 1 cut(s) | 362 |
| SseBI | AGGCCT | 1 cut(s) | 266 |
| SsiI | CCGC | 4 cut(s) | 11, 111, 130, 153 |
| StuI | AGGCCT | 1 cut(s) | 266 |
| StyD4I | CCNGG | 1 cut(s) | 240 |
| StyI | CCWWGG | 1 cut(s) | 381 |
| TaiI | ACGT | 2 cut(s) | 93, 213 |
| TaqI | TCGA | 4 cut(s) | 182, 234, 252, 449 |
| TasI | AATT | 1 cut(s) | 362 |
| TseI | GCWGC | 1 cut(s) | 16 |
| TspDTI | ATGAA | 1 cut(s) | 127 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 419 |
| XhoI | CTCGAG | 1 cut(s) | 448 |