RLG00000023234
NAC Family

inactive purple acid phosphatase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
OG0007682
Physical Location & Seq
Forward (+)
20293149 .. 20297134
3986 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000023234

Sequence Viewer

Length: 1149 bp
ATGATGATGATGATGGGAAGAAGGGTGAGGGTGTTGTGCTGCTTCACCACCTTTACATATGTGTATCTCTACTCCCTTGTCGTGGCTTTGCCAACCATACCAGACGGTGATCTCCATCTGCTACTGCCCGGTGATGGCGAGTCATTCAAGATCACTCTCTTTGCCGACCTGCATTTCGGTGAGGCCGCCTCCACCGACTGGGGTCCACTCCAAGATGTCAACTCCCTCAGAGTCATGTCCACTGTGCTTGATCATGAAATCCCAGATTTTGTTATCTATCTTGGAGATGTCATCACAGCCAACAATATAGCAATTAAAAATGCAAGCTTGTATTGGGATCAGGCAATTTCTCCAACAAGAGCCAGAGGAATTCCTTGGGCCAGTGTTTTTGGAAACCATGATGATGCAGCATTTGAGTGGCCGATGGAGTGGTTTTCAGGTCCCGGAATTCCTAAAATTCGTTGCTCTGTAGCCAATTCCTCATGCTCAGGAGAAGAAGACTGTAGCTTCAAAGGCACACATCGTCTGGAGTTAATGAAAAATGAGATTGCACTTAGCCCTCTTTCATATTCTCGACATGGTCCTAAAGAACTTTGGCCTAGTGTATCTAACTATGTCCTCCAAGTTTCTTCGTCAAACAATCCCGGGTCACCTGTGGCATTTTTATATTTCCTAGATTCTGGTGGCGGTTCCTACCCAGAAGTTTTATCAAGTGCCCAAGCAGAATGGTTCCGTCAGAAAGCTCTAGAGATCAACCCTGATTCAAGGGTGCCTGAGCTAATCTTTTGGCATATACCAAGTCGTGCTTACAAGAAAGCGGCGCCAAGATTTGGTATACACAAGCCTTGTGTCGGTTCAATTAATAAGGAGAGAGTAGCAACTCAAGACGCTGAAAATGGCATCATGAAACTTTTGGCTGAAAGGGTTTCTGTCAAGGCAATATTTGTAGGACACAACCATGGATTGGACTGGTGCTGCCCTTATAAGAAACTCTGGCTATGCTTTGCTCGGCATACTGGTTATGGTGGCTATGGAAACTGGGCTAGAGGAGCTAGAATCATAGAAATCACCCAGCAGCCTTTCTCTATTAAATCTTGGATTAGAATGGAGGATGGTAGTGTACATAGTGAACTTGTCTTGAGTCCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0003993 GO:0005575 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0042578 GO:0044237
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Metallophos

Protein Analysis

383

Amino Acids

42.67

Weight (kDa)

6.46

Isoelectric Point (pI)

33.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Metallophos PF00149 49 - 320 3.3e-10 Calcineurin-like phosphoesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 984
Acc36I ACCTGC 1 cut(s) 177
AccB1I GGYRCC 2 cut(s) 769, 820
AccB7I CCANNNNNTGG 3 cut(s) 198, 830, 964
AccI GTMKAC 1 cut(s) 835
AciI CCGC 3 cut(s) 186, 687, 818
AclWI GGATC 1 cut(s) 345
AcoI YGGCCR 1 cut(s) 419
AcsI RAATTY 3 cut(s) 369, 447, 456
AcyI GRCGYC 1 cut(s) 821
AfaI GTAC 1 cut(s) 1122
AfiI CCNNNNNNNGG 6 cut(s) 82, 134, 198, 830, 851, 964
AgsI TTSAA 4 cut(s) 148, 511, 765, 858
AluBI AGCT 5 cut(s) 327, 507, 743, 778, 1052
AluI AGCT 5 cut(s) 327, 507, 743, 778, 1052
AlwI GGATC 1 cut(s) 345
Ama87I CYCGRG 1 cut(s) 644
AoxI GGCC 4 cut(s) 183, 378, 419, 596
ApeKI GCWGC 4 cut(s) 39, 407, 975, 1075
ApoI RAATTY 3 cut(s) 369, 447, 456
ArsI GACNNNNNNTTYG 2 cut(s) 158, 190
AseI ATTAAT 1 cut(s) 861
AspLEI GCGC 1 cut(s) 823
AspS9I GGNCC 4 cut(s) 203, 378, 440, 581
AsuC2I CCSGG 4 cut(s) 129, 444, 645, 646
AsuHPI GGTGA 7 cut(s) 37, 37, 119, 143, 191, 642, 1060
AvaI CYCGRG 1 cut(s) 644
AvaII GGWCC 3 cut(s) 203, 440, 581
BaeGI GKGCMC 1 cut(s) 718
BanI GGYRCC 2 cut(s) 769, 820
BbsI GAAGAC 1 cut(s) 504
BbvI GCAGC 4 cut(s) 26, 419, 962, 1087
BccI CCATC 5 cut(s) 7, 123, 128, 418, 1106
BclI TGATCA 1 cut(s) 250
BcnI CCSGG 4 cut(s) 129, 444, 645, 646
BfaI CTAG 5 cut(s) 600, 674, 746, 1044, 1053
BfmI CTRYAG 2 cut(s) 468, 502
BfoI RGCGCY 1 cut(s) 824
BfuAI ACCTGC 1 cut(s) 177
BisI GCNGC 6 cut(s) 40, 186, 408, 819, 976, 1076
BlsI GCNGC 6 cut(s) 41, 187, 409, 820, 977, 1077
Bme1390I CCNGG 4 cut(s) 129, 444, 645, 646
Bme18I GGWCC 3 cut(s) 203, 440, 581
BmeT110I CYCGRG 1 cut(s) 644
BmgT120I GGNCC 4 cut(s) 203, 378, 440, 581
BmiI GGNNCC 6 cut(s) 204, 442, 691, 731, 771, 822
BmrFI CCNGG 4 cut(s) 129, 444, 645, 646
BmrI ACTGGG 2 cut(s) 208, 1048
BmsI GCATC 2 cut(s) 394, 909
BmuI ACTGGG 2 cut(s) 208, 1048
BoxI GACNNNNGTC 1 cut(s) 201
BpiI GAAGAC 1 cut(s) 504
BplI GAGNNNNNCTC 2 cut(s) 173, 205
BpmI CTGGAG 1 cut(s) 548
Bpu10I CCTNAGC 2 cut(s) 487, 774
BpuEI CTTGAG 1 cut(s) 867
BpuMI CCSGG 4 cut(s) 129, 444, 645, 646
BsaBI GATNNNNATC 1 cut(s) 114
BsaHI GRCGYC 1 cut(s) 821
BsaJI CCNNGG 3 cut(s) 374, 644, 958
Bsc4I CCNNNNNNNGG 6 cut(s) 82, 134, 198, 830, 851, 964
Bse1I ACTGG 5 cut(s) 203, 381, 974, 1021, 1043
Bse8I GATNNNNATC 1 cut(s) 114
BseDI CCNNGG 3 cut(s) 374, 644, 958
BseGI GGATG 1 cut(s) 1117
BseJI GATNNNNATC 1 cut(s) 114
BseLI CCNNNNNNNGG 6 cut(s) 82, 134, 198, 830, 851, 964
BseMII CTCAG 3 cut(s) 241, 501, 765
BseNI ACTGG 5 cut(s) 203, 381, 974, 1021, 1043
BseRI GAGGAG 1 cut(s) 1062
BseSI GKGCMC 1 cut(s) 718
BseXI GCAGC 4 cut(s) 26, 419, 962, 1087
BseYI CCCAGC 1 cut(s) 1071
BshFI GGCC 4 cut(s) 185, 380, 421, 598
BshNI GGYRCC 2 cut(s) 769, 820
BsiHKCI CYCGRG 1 cut(s) 644
BsiSI CCGG 3 cut(s) 129, 444, 645
BslFI GGGAC 2 cut(s) 426, 1128
BslI CCNNNNNNNGG 6 cut(s) 82, 134, 198, 830, 851, 964
BsmFI GGGAC 2 cut(s) 426, 1128
BsnI GGCC 4 cut(s) 185, 380, 421, 598
BsoBI CYCGRG 1 cut(s) 644
Bsp1286I GDGCHC 1 cut(s) 718
Bsp1407I TGTACA 1 cut(s) 1120
Bsp143I GATC 5 cut(s) 109, 150, 250, 337, 750
Bsp19I CCATGG 1 cut(s) 958
BspACI CCGC 3 cut(s) 186, 687, 818
BspANI GGCC 4 cut(s) 185, 380, 421, 598
BspCNI CTCAG 3 cut(s) 240, 500, 766
BspHI TCATGA 2 cut(s) 253, 903
BspLI GGNNCC 6 cut(s) 204, 442, 691, 731, 771, 822
BspMI ACCTGC 1 cut(s) 177
BspPI GGATC 1 cut(s) 345
BspT107I GGYRCC 2 cut(s) 769, 820
BsrGI TGTACA 1 cut(s) 1120
BsrI ACTGG 5 cut(s) 203, 381, 974, 1021, 1043
BssECI CCNNGG 3 cut(s) 374, 644, 958
BssMI GATC 5 cut(s) 109, 150, 250, 337, 750
BssNAI GTATAC 1 cut(s) 836
BssNI GRCGYC 1 cut(s) 821
BssT1I CCWWGG 2 cut(s) 374, 958
Bst1107I GTATAC 1 cut(s) 836
Bst4CI ACNGT 3 cut(s) 107, 244, 503
BstACI GRCGYC 1 cut(s) 821
BstAUI TGTACA 1 cut(s) 1120
BstC8I GCNNGC 1 cut(s) 325
BstDEI CTNAG 4 cut(s) 227, 487, 554, 774
BstDSI CCRYGG 1 cut(s) 958
BstEII GGTNACC 1 cut(s) 648
BstF5I GGATG 1 cut(s) 1117
BstH2I RGCGCY 1 cut(s) 824
BstHHI GCGC 1 cut(s) 823
BstKTI GATC 5 cut(s) 112, 153, 253, 340, 753
BstMBI GATC 5 cut(s) 109, 150, 250, 337, 750
BstMWI GCNNNNNNNGC 2 cut(s) 513, 1049
BstPAI GACNNNNGTC 1 cut(s) 201
BstPI GGTNACC 1 cut(s) 648
BstSCI CCNGG 4 cut(s) 127, 442, 643, 644
BstSFI CTRYAG 2 cut(s) 468, 502
BstSLI GKGCMC 1 cut(s) 718
BstV1I GCAGC 4 cut(s) 26, 419, 962, 1087
BstV2I GAAGAC 1 cut(s) 504
BstZ17I GTATAC 1 cut(s) 836
BsuRI GGCC 4 cut(s) 185, 380, 421, 598
BtgI CCRYGG 1 cut(s) 958
BtsCI GGATG 1 cut(s) 1117
BtsIMutI CAGTG 2 cut(s) 240, 388
BveI ACCTGC 1 cut(s) 177
Cac8I GCNNGC 1 cut(s) 325
CciI TCATGA 2 cut(s) 253, 903
CfoI GCGC 1 cut(s) 823
Cfr13I GGNCC 4 cut(s) 203, 378, 440, 581
Cfr9I CCCGGG 1 cut(s) 644
CseI GACGC 1 cut(s) 896
Csp6I GTAC 1 cut(s) 1121
CspCI CAANNNNNGTGG 2 cut(s) 229, 264
CviAII CATG 7 cut(s) 235, 254, 398, 483, 578, 904, 959
CviQI GTAC 1 cut(s) 1121
DdeI CTNAG 4 cut(s) 227, 487, 554, 774
DinI GGCGCC 1 cut(s) 822
DpnI GATC 5 cut(s) 111, 152, 252, 339, 752
DpnII GATC 5 cut(s) 109, 150, 250, 337, 750
EaeI YGGCCR 1 cut(s) 419
Eco130I CCWWGG 2 cut(s) 374, 958
Eco47I GGWCC 3 cut(s) 203, 440, 581
Eco88I CYCGRG 1 cut(s) 644
Eco91I GGTNACC 1 cut(s) 648
EcoO109I RGGNCCY 1 cut(s) 440
EcoO65I GGTNACC 1 cut(s) 648
EcoRI GAATTC 2 cut(s) 369, 447
EcoT14I CCWWGG 2 cut(s) 374, 958
EgeI GGCGCC 1 cut(s) 822
EheI GGCGCC 1 cut(s) 822
ErhI CCWWGG 2 cut(s) 374, 958
FaeI CATG 7 cut(s) 238, 257, 401, 486, 581, 907, 962
FalI AAGNNNNNCTT 2 cut(s) 790, 822
FaqI GGGAC 2 cut(s) 426, 1128
FatI CATG 7 cut(s) 234, 253, 397, 482, 577, 903, 958
FauNDI CATATG 1 cut(s) 58
FbaI TGATCA 1 cut(s) 250
FblI GTMKAC 1 cut(s) 835
Fnu4HI GCNGC 6 cut(s) 40, 186, 408, 819, 976, 1076
FokI GGATG 1 cut(s) 1124
Fsp4HI GCNGC 6 cut(s) 40, 186, 408, 819, 976, 1076
FspBI CTAG 5 cut(s) 600, 674, 746, 1044, 1053
GlaI GCGC 1 cut(s) 822
GluI GCNGC 6 cut(s) 40, 186, 408, 819, 976, 1076
GsaI CCCAGC 1 cut(s) 1075
GsuI CTGGAG 1 cut(s) 548
HaeII RGCGCY 1 cut(s) 824
HaeIII GGCC 4 cut(s) 185, 380, 421, 598
HapII CCGG 3 cut(s) 129, 444, 645
HgaI GACGC 1 cut(s) 896
HhaI GCGC 1 cut(s) 823
Hin1I GRCGYC 1 cut(s) 821
Hin1II CATG 7 cut(s) 238, 257, 401, 486, 581, 907, 962
Hin6I GCGC 1 cut(s) 821
HinP1I GCGC 1 cut(s) 821
HincII GTYRAC 1 cut(s) 220
HindII GTYRAC 1 cut(s) 220
HindIII AAGCTT 1 cut(s) 325
HinfI GANTC 6 cut(s) 140, 231, 677, 761, 1056, 1141
HpaII CCGG 3 cut(s) 129, 444, 645
HphI GGTGA 7 cut(s) 37, 37, 119, 143, 191, 642, 1060
Hpy166II GTNNAC 6 cut(s) 206, 220, 240, 836, 1121, 1130
Hpy188I TCNGA 2 cut(s) 230, 738
Hpy188III TCNNGA 9 cut(s) 148, 254, 489, 527, 573, 746, 884, 904, 1138
Hpy8I GTNNAC 6 cut(s) 206, 220, 240, 836, 1121, 1130
HpyAV CCTTC 1 cut(s) 15
HpyCH4III ACNGT 3 cut(s) 107, 244, 503
HpyCH4V TGCA 4 cut(s) 172, 323, 407, 551
HpyF10VI GCNNNNNNNGC 2 cut(s) 513, 1049
HpyF3I CTNAG 4 cut(s) 227, 487, 554, 774
Hsp92I GRCGYC 1 cut(s) 821
Hsp92II CATG 7 cut(s) 238, 257, 401, 486, 581, 907, 962
HspAI GCGC 1 cut(s) 821
KasI GGCGCC 1 cut(s) 820
Ksp22I TGATCA 1 cut(s) 250
Kzo9I GATC 5 cut(s) 109, 150, 250, 337, 750
LmnI GCTCC 1 cut(s) 1049
Lsp1109I GCAGC 4 cut(s) 26, 419, 962, 1087
LweI GCATC 2 cut(s) 394, 909
MaeI CTAG 5 cut(s) 600, 674, 746, 1044, 1053
MaeIII GTNAC 1 cut(s) 648
MalI GATC 5 cut(s) 111, 152, 252, 339, 752
MboI GATC 5 cut(s) 109, 150, 250, 337, 750
MboII GAAGA 4 cut(s) 30, 506, 509, 621
MhlI GDGCHC 1 cut(s) 718
MluCI AATT 7 cut(s) 312, 345, 369, 447, 456, 475, 858
Mly113I GGCGCC 1 cut(s) 821
MlyI GAGTC 2 cut(s) 149, 240
MmeI TCCRAC 1 cut(s) 377
MseI TTAA 4 cut(s) 315, 533, 861, 1089
MslI CAYNNNNRTG 4 cut(s) 177, 402, 415, 957
MspI CCGG 3 cut(s) 129, 444, 645
MspR9I CCNGG 4 cut(s) 129, 444, 645, 646
MwoI GCNNNNNNNGC 2 cut(s) 513, 1049
NarI GGCGCC 1 cut(s) 821
NciI CCSGG 4 cut(s) 129, 444, 645, 646
NcoI CCATGG 1 cut(s) 958
NdeI CATATG 1 cut(s) 58
NdeII GATC 5 cut(s) 109, 150, 250, 337, 750
NlaIII CATG 7 cut(s) 238, 257, 401, 486, 581, 907, 962
NlaIV GGNNCC 6 cut(s) 204, 442, 691, 731, 771, 822
NmeAIII GCCGAG 1 cut(s) 988
NmuCI GTSAC 1 cut(s) 648
PagI TCATGA 2 cut(s) 253, 903
PfeI GAWTC 3 cut(s) 677, 761, 1056
PflFI GACNNNGTC 1 cut(s) 579
PflMI CCANNNNNTGG 3 cut(s) 198, 830, 964
PfoI TCCNGGA 1 cut(s) 442
PkrI GCNGC 6 cut(s) 41, 187, 409, 820, 977, 1077
PleI GAGTC 2 cut(s) 148, 239
PluTI GGCGCC 1 cut(s) 824
PpsI GAGTC 2 cut(s) 148, 239
PpuMI RGGWCCY 1 cut(s) 440
PshAI GACNNNNGTC 1 cut(s) 201
PshBI ATTAAT 1 cut(s) 861
PsiI TTATAA 1 cut(s) 984
Psp5II RGGWCCY 1 cut(s) 440
PspEI GGTNACC 1 cut(s) 648
PspFI CCCAGC 1 cut(s) 1071
PspN4I GGNNCC 6 cut(s) 204, 442, 691, 731, 771, 822
PspPI GGNCC 4 cut(s) 203, 378, 440, 581
PspPPI RGGWCCY 1 cut(s) 440
PsyI GACNNNGTC 1 cut(s) 579
RsaI GTAC 1 cut(s) 1122
RsaNI GTAC 1 cut(s) 1121
RseI CAYNNNNRTG 4 cut(s) 177, 402, 415, 957
SaqAI TTAA 4 cut(s) 315, 533, 861, 1089
SatI GCNGC 6 cut(s) 40, 186, 408, 819, 976, 1076
Sau3AI GATC 5 cut(s) 109, 150, 250, 337, 750
Sau96I GGNCC 4 cut(s) 203, 378, 440, 581
SchI GAGTC 2 cut(s) 149, 240
ScrFI CCNGG 4 cut(s) 129, 444, 645, 646
SduI GDGCHC 1 cut(s) 718
SetI ASST 9 cut(s) 53, 171, 329, 442, 509, 655, 745, 780, 1054
SfaNI GCATC 2 cut(s) 394, 909
SfcI CTRYAG 2 cut(s) 468, 502
SfoI GGCGCC 1 cut(s) 822
SinI GGWCC 3 cut(s) 203, 440, 581
SmaI CCCGGG 1 cut(s) 646
SmiMI CAYNNNNRTG 4 cut(s) 177, 402, 415, 957
SmlI CTYRAG 2 cut(s) 882, 1138
SmoI CTYRAG 2 cut(s) 882, 1138
Sse9I AATT 7 cut(s) 312, 345, 369, 447, 456, 475, 858
SsiI CCGC 3 cut(s) 186, 687, 818
SspDI GGCGCC 1 cut(s) 820
SspI AATATT 1 cut(s) 942
SspMI CTAG 5 cut(s) 600, 674, 746, 1044, 1053
StyD4I CCNGG 4 cut(s) 127, 442, 643, 644
StyI CCWWGG 2 cut(s) 374, 958
TaaI ACNGT 3 cut(s) 107, 244, 503
TaqI TCGA 1 cut(s) 574
TasI AATT 7 cut(s) 312, 345, 369, 447, 456, 475, 858
TatI WGTACW 1 cut(s) 1120
TauI GCSGC 2 cut(s) 188, 821
TfiI GAWTC 3 cut(s) 677, 761, 1056
Tru1I TTAA 4 cut(s) 315, 533, 861, 1089
Tru9I TTAA 4 cut(s) 315, 533, 861, 1089
TscAI CASTG 2 cut(s) 247, 388
TseFI GTSAC 1 cut(s) 648
TseI GCWGC 4 cut(s) 39, 407, 975, 1075
Tsp45I GTSAC 1 cut(s) 648
TspDTI ATGAA 4 cut(s) 270, 551, 555, 920
TspGWI ACGGA 1 cut(s) 722
TspMI CCCGGG 1 cut(s) 644
TspRI CASTG 2 cut(s) 247, 388
Tth111I GACNNNGTC 1 cut(s) 579
Van91I CCANNNNNTGG 3 cut(s) 198, 830, 964
VpaK11BI GGWCC 3 cut(s) 203, 440, 581
VspI ATTAAT 1 cut(s) 861
XapI RAATTY 3 cut(s) 369, 447, 456
XbaI TCTAGA 1 cut(s) 745
XmaI CCCGGG 1 cut(s) 644
XmiI GTMKAC 1 cut(s) 835
XspI CTAG 5 cut(s) 600, 674, 746, 1044, 1053
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.