Rh3DG289600
NAC Family

inactive purple acid phosphatase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
OG0007682
Physical Location & Seq
Reverse (-)
29929235 .. 29946325
17091 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG289600.1

Sequence Viewer

Length: 1242 bp
ATGATGCAAAAGATACTTGTGAGGTTGCGCGTTCATTGCGACAAATGCAGAATCGAGGCTATGAAGATTGCAGCAACCACACCTGGTGTACATGCACCAAGTGTCAATACAAGGGTGAGGGTTTTGTGCTGCTTCACTACCTTTACATATGTGTATATCTACTCCCTTGTCGTGGCGGCTTTGCCAACCATACCGGACGGTGATCACCATCTGCTACTGCCCGGTGCTGGCCAGTCATTCAAGATCGCTCTCTTTGCCGACCTGCATTTCGGAGAGGCCGCCTCCACCGACTGGGGTCCACTCCAAGACGTCAACTCCCTCAGAGTCATGTCCACTGTGCTTGATCATGAAATCCCAGATTTTGTTATCTATCTTGGAGATGTCATCACAGCCAATAATATAGCAATTAAAAATGCAAGCCTGTATTGGGATCAGGCAATTTCTCCAACAAGAGCCAGAGGAATTCCTTGGGCCAGTGTTTTTGGAAACCATGATGATGCGGCATTTGAGTGGCCGATGGAGTGGTTTTCAGGTCCCGGAATTCCTGAAATTCGTTGCCCTGTAGCCAATTCCTCATGCTCAGGAGAAGAAGACTGTAGCTTCAAAGGCACACATCGTCTGGAGTTAATGAAAAATGAGATTGCACTTAGCTCTCTTTCATATTCTCGATATGGTCCTAAAGAACTTTGGCCTAGTGTATCTAACTATGTCCTGCAAGTTTCTTCGTCAAACAATCCCGGGTCACGTGTGGCATTTTTATATTTCCTAGATTCTGGTGGTGGTTCCTACCCAGAAGTTTTATCAAGTGCCCAAGCAGAATGGTTCCGTCGGAAAGCTCTAGAGATCAACCCTGATTCAAGGGTGCCTGAGCTAATCTTTTGGCATATACCAAGTCATGCTTACAAGAAAGCGGCTCCAAGATTTGGTATACACAAGCCTTGTGTCGGTTCAATTAATAAGGAGAGAGTAGCAACTCAAGACGCTGAAAATGGCATCATGAAACTTTTGGCTGAAAGGGTTTCTGTCAAGGCAATATTTGTAGGACACAACCATGGATTAGACTGGTGCTGCCCTTATAAGAAACTGTGGCTATGCTTTGCTCGGCATACTGGTTATGGTGGCTATGGAAACTGGGCTAGAGGAGCTAGAATCATAGAAATCACCCAGCAGCCTTTCTCTATTAAATCTTGGATTAGAATGGAGGATGGTAGTGTACATAGTGAACTTGTCTTGAGTCCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0003993 GO:0005575 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0042578 GO:0044237
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Metallophos

Protein Analysis

413

Amino Acids

46.02

Weight (kDa)

7.61

Isoelectric Point (pI)

33.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Metallophos PF00149 80 - 351 2.1e-10 Calcineurin-like phosphoesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1077
AatII GACGTC 1 cut(s) 312
Acc36I ACCTGC 1 cut(s) 270
AccB1I GGYRCC 1 cut(s) 862
AccB7I CCANNNNNTGG 2 cut(s) 291, 923
AccI GTMKAC 1 cut(s) 928
AccII CGCG 1 cut(s) 30
AciI CCGC 4 cut(s) 176, 279, 500, 911
AclWI GGATC 1 cut(s) 438
AcoI YGGCCR 2 cut(s) 229, 512
AcsI RAATTY 3 cut(s) 462, 540, 549
AcvI CACGTG 1 cut(s) 746
AcyI GRCGYC 1 cut(s) 309
AdeI CACNNNGTG 2 cut(s) 86, 101
AfaI GTAC 2 cut(s) 90, 1215
AfiI CCNNNNNNNGG 6 cut(s) 172, 227, 291, 427, 923, 944
AflIII ACRYGT 1 cut(s) 745
AgsI TTSAA 4 cut(s) 241, 604, 858, 951
AjnI CCWGG 1 cut(s) 82
AluBI AGCT 5 cut(s) 600, 651, 836, 871, 1145
AluI AGCT 5 cut(s) 600, 651, 836, 871, 1145
AlwI GGATC 1 cut(s) 438
Ama87I CYCGRG 1 cut(s) 737
AoxI GGCC 5 cut(s) 229, 276, 471, 512, 689
ApeKI GCWGC 4 cut(s) 71, 129, 1068, 1168
ApoI RAATTY 3 cut(s) 462, 540, 549
ArsI GACNNNNNNTTYG 2 cut(s) 251, 283
AseI ATTAAT 1 cut(s) 954
AspLEI GCGC 1 cut(s) 30
AspS9I GGNCC 4 cut(s) 296, 471, 533, 674
AsuC2I CCSGG 4 cut(s) 222, 537, 738, 739
AsuHPI GGTGA 4 cut(s) 127, 197, 212, 1153
AvaI CYCGRG 1 cut(s) 737
AvaII GGWCC 3 cut(s) 296, 533, 674
BaeGI GKGCMC 1 cut(s) 811
BalI TGGCCA 1 cut(s) 231
BanI GGYRCC 1 cut(s) 862
BbrPI CACGTG 1 cut(s) 746
BbsI GAAGAC 1 cut(s) 597
BbvI GCAGC 4 cut(s) 83, 116, 1055, 1180
BccI CCATC 3 cut(s) 216, 511, 1199
BciT130I CCWGG 1 cut(s) 84
BclI TGATCA 2 cut(s) 202, 343
BcnI CCSGG 4 cut(s) 222, 537, 738, 739
BfaI CTAG 5 cut(s) 693, 767, 839, 1137, 1146
BfmI CTRYAG 2 cut(s) 561, 595
BfuAI ACCTGC 1 cut(s) 270
BisI GCNGC 8 cut(s) 72, 130, 177, 279, 501, 912, 1069, 1169
BlsI GCNGC 8 cut(s) 73, 131, 178, 280, 502, 913, 1070, 1170
Bme1390I CCNGG 5 cut(s) 84, 222, 537, 738, 739
Bme18I GGWCC 3 cut(s) 296, 533, 674
BmeT110I CYCGRG 1 cut(s) 737
BmgT120I GGNCC 4 cut(s) 296, 471, 533, 674
BmiI GGNNCC 6 cut(s) 297, 535, 784, 824, 864, 915
BmrFI CCNGG 5 cut(s) 84, 222, 537, 738, 739
BmrI ACTGGG 2 cut(s) 301, 1141
BmsI GCATC 2 cut(s) 487, 1002
BmuI ACTGGG 2 cut(s) 301, 1141
BoxI GACNNNNGTC 1 cut(s) 294
BpiI GAAGAC 1 cut(s) 597
BplI GAGNNNNNCTC 2 cut(s) 266, 298
BpmI CTGGAG 1 cut(s) 641
Bpu10I CCTNAGC 2 cut(s) 580, 867
BpuEI CTTGAG 1 cut(s) 960
BpuMI CCSGG 4 cut(s) 222, 537, 738, 739
BsaAI YACGTR 1 cut(s) 746
BsaBI GATNNNNATC 1 cut(s) 207
BsaHI GRCGYC 1 cut(s) 309
BsaJI CCNNGG 3 cut(s) 467, 737, 1051
BsaWI WCCGGW 1 cut(s) 193
BsaXI ACNNNNNCTCC 2 cut(s) 299, 329
Bsc4I CCNNNNNNNGG 6 cut(s) 172, 227, 291, 427, 923, 944
Bse1I ACTGG 6 cut(s) 232, 296, 474, 1067, 1114, 1136
Bse3DI GCAATG 1 cut(s) 34
Bse8I GATNNNNATC 1 cut(s) 207
BseBI CCWGG 1 cut(s) 84
BseDI CCNNGG 3 cut(s) 467, 737, 1051
BseGI GGATG 1 cut(s) 1210
BseJI GATNNNNATC 1 cut(s) 207
BseLI CCNNNNNNNGG 6 cut(s) 172, 227, 291, 427, 923, 944
BseMI GCAATG 1 cut(s) 34
BseMII CTCAG 3 cut(s) 334, 594, 858
BseNI ACTGG 6 cut(s) 232, 296, 474, 1067, 1114, 1136
BseRI GAGGAG 1 cut(s) 1155
BseSI GKGCMC 1 cut(s) 811
BseXI GCAGC 4 cut(s) 83, 116, 1055, 1180
BseYI CCCAGC 1 cut(s) 1164
Bsh1236I CGCG 1 cut(s) 30
BshFI GGCC 5 cut(s) 231, 278, 473, 514, 691
BshNI GGYRCC 1 cut(s) 862
BsiHKCI CYCGRG 1 cut(s) 737
BsiSI CCGG 4 cut(s) 194, 222, 537, 738
BslFI GGGAC 2 cut(s) 519, 1221
BslI CCNNNNNNNGG 6 cut(s) 172, 227, 291, 427, 923, 944
BsmFI GGGAC 2 cut(s) 519, 1221
BsnI GGCC 5 cut(s) 231, 278, 473, 514, 691
BsoBI CYCGRG 1 cut(s) 737
Bsp1286I GDGCHC 1 cut(s) 811
Bsp1407I TGTACA 2 cut(s) 88, 1213
Bsp143I GATC 5 cut(s) 202, 243, 343, 430, 843
Bsp19I CCATGG 1 cut(s) 1051
BspACI CCGC 4 cut(s) 176, 279, 500, 911
BspANI GGCC 5 cut(s) 231, 278, 473, 514, 691
BspCNI CTCAG 3 cut(s) 333, 593, 859
BspFNI CGCG 1 cut(s) 30
BspHI TCATGA 2 cut(s) 346, 996
BspLI GGNNCC 6 cut(s) 297, 535, 784, 824, 864, 915
BspMI ACCTGC 1 cut(s) 270
BspPI GGATC 1 cut(s) 438
BspT107I GGYRCC 1 cut(s) 862
BsrDI GCAATG 1 cut(s) 34
BsrGI TGTACA 2 cut(s) 88, 1213
BsrI ACTGG 6 cut(s) 232, 296, 474, 1067, 1114, 1136
BssECI CCNNGG 3 cut(s) 467, 737, 1051
BssMI GATC 5 cut(s) 202, 243, 343, 430, 843
BssNAI GTATAC 1 cut(s) 929
BssNI GRCGYC 1 cut(s) 309
BssT1I CCWWGG 2 cut(s) 467, 1051
Bst1107I GTATAC 1 cut(s) 929
Bst2UI CCWGG 1 cut(s) 84
Bst4CI ACNGT 4 cut(s) 200, 337, 596, 1086
BstACI GRCGYC 1 cut(s) 309
BstAUI TGTACA 2 cut(s) 88, 1213
BstBAI YACGTR 1 cut(s) 746
BstC8I GCNNGC 2 cut(s) 229, 418
BstDEI CTNAG 4 cut(s) 320, 580, 647, 867
BstDSI CCRYGG 1 cut(s) 1051
BstF5I GGATG 1 cut(s) 1210
BstFNI CGCG 1 cut(s) 30
BstHHI GCGC 1 cut(s) 30
BstKTI GATC 5 cut(s) 205, 246, 346, 433, 846
BstMBI GATC 5 cut(s) 202, 243, 343, 430, 843
BstMWI GCNNNNNNNGC 5 cut(s) 36, 45, 254, 606, 1142
BstNI CCWGG 1 cut(s) 84
BstNSI RCATGY 1 cut(s) 95
BstPAI GACNNNNGTC 1 cut(s) 294
BstSCI CCNGG 5 cut(s) 82, 220, 535, 736, 737
BstSFI CTRYAG 2 cut(s) 561, 595
BstSLI GKGCMC 1 cut(s) 811
BstUI CGCG 1 cut(s) 30
BstV1I GCAGC 4 cut(s) 83, 116, 1055, 1180
BstV2I GAAGAC 1 cut(s) 597
BstZ17I GTATAC 1 cut(s) 929
BsuRI GGCC 5 cut(s) 231, 278, 473, 514, 691
BtgI CCRYGG 1 cut(s) 1051
BtsCI GGATG 1 cut(s) 1210
BtsIMutI CAGTG 2 cut(s) 333, 481
BveI ACCTGC 1 cut(s) 270
Cac8I GCNNGC 2 cut(s) 229, 418
CciI TCATGA 2 cut(s) 346, 996
CfoI GCGC 1 cut(s) 30
Cfr13I GGNCC 4 cut(s) 296, 471, 533, 674
Cfr9I CCCGGG 1 cut(s) 737
CseI GACGC 1 cut(s) 989
CsiI ACCWGGT 1 cut(s) 82
Csp6I GTAC 2 cut(s) 89, 1214
CspCI CAANNNNNGTGG 2 cut(s) 322, 357
CviAII CATG 8 cut(s) 92, 328, 347, 491, 576, 896, 997, 1052
CviQI GTAC 2 cut(s) 89, 1214
DdeI CTNAG 4 cut(s) 320, 580, 647, 867
DpnI GATC 5 cut(s) 204, 245, 345, 432, 845
DpnII GATC 5 cut(s) 202, 243, 343, 430, 843
DraIII CACNNNGTG 2 cut(s) 86, 101
EaeI YGGCCR 2 cut(s) 229, 512
Eco130I CCWWGG 2 cut(s) 467, 1051
Eco47I GGWCC 3 cut(s) 296, 533, 674
Eco72I CACGTG 1 cut(s) 746
Eco88I CYCGRG 1 cut(s) 737
EcoO109I RGGNCCY 1 cut(s) 533
EcoRI GAATTC 2 cut(s) 462, 540
EcoRII CCWGG 1 cut(s) 82
EcoT14I CCWWGG 2 cut(s) 467, 1051
ErhI CCWWGG 2 cut(s) 467, 1051
FaeI CATG 8 cut(s) 95, 331, 350, 494, 579, 899, 1000, 1055
FalI AAGNNNNNCTT 2 cut(s) 883, 915
FaqI GGGAC 2 cut(s) 519, 1221
FatI CATG 8 cut(s) 91, 327, 346, 490, 575, 895, 996, 1051
FauNDI CATATG 1 cut(s) 148
FbaI TGATCA 2 cut(s) 202, 343
FblI GTMKAC 1 cut(s) 928
Fnu4HI GCNGC 8 cut(s) 72, 130, 177, 279, 501, 912, 1069, 1169
FokI GGATG 1 cut(s) 1217
Fsp4HI GCNGC 8 cut(s) 72, 130, 177, 279, 501, 912, 1069, 1169
FspBI CTAG 5 cut(s) 693, 767, 839, 1137, 1146
GlaI GCGC 1 cut(s) 29
GluI GCNGC 8 cut(s) 72, 130, 177, 279, 501, 912, 1069, 1169
GsaI CCCAGC 1 cut(s) 1168
GsuI CTGGAG 1 cut(s) 641
HaeIII GGCC 5 cut(s) 231, 278, 473, 514, 691
HapII CCGG 4 cut(s) 194, 222, 537, 738
HgaI GACGC 1 cut(s) 989
HhaI GCGC 1 cut(s) 30
Hin1I GRCGYC 1 cut(s) 309
Hin1II CATG 8 cut(s) 95, 331, 350, 494, 579, 899, 1000, 1055
Hin6I GCGC 1 cut(s) 28
HinP1I GCGC 1 cut(s) 28
HincII GTYRAC 1 cut(s) 313
HindII GTYRAC 1 cut(s) 313
HinfI GANTC 6 cut(s) 51, 324, 770, 854, 1149, 1234
HpaII CCGG 4 cut(s) 194, 222, 537, 738
HphI GGTGA 4 cut(s) 127, 197, 212, 1153
Hpy166II GTNNAC 7 cut(s) 89, 299, 313, 333, 929, 1214, 1223
Hpy188I TCNGA 3 cut(s) 272, 323, 831
Hpy8I GTNNAC 7 cut(s) 89, 299, 313, 333, 929, 1214, 1223
Hpy99I CGWCG 1 cut(s) 831
HpyCH4III ACNGT 4 cut(s) 200, 337, 596, 1086
HpyCH4IV ACGT 2 cut(s) 309, 745
HpyCH4V TGCA 8 cut(s) 7, 48, 71, 95, 265, 416, 644, 715
HpyF10VI GCNNNNNNNGC 5 cut(s) 36, 45, 254, 606, 1142
HpyF3I CTNAG 4 cut(s) 320, 580, 647, 867
HpySE526I ACGT 2 cut(s) 309, 745
Hsp92I GRCGYC 1 cut(s) 309
Hsp92II CATG 8 cut(s) 95, 331, 350, 494, 579, 899, 1000, 1055
HspAI GCGC 1 cut(s) 28
Ksp22I TGATCA 2 cut(s) 202, 343
Kzo9I GATC 5 cut(s) 202, 243, 343, 430, 843
LmnI GCTCC 2 cut(s) 919, 1142
Lsp1109I GCAGC 4 cut(s) 83, 116, 1055, 1180
LweI GCATC 2 cut(s) 487, 1002
MabI ACCWGGT 1 cut(s) 82
MaeI CTAG 5 cut(s) 693, 767, 839, 1137, 1146
MaeII ACGT 2 cut(s) 309, 745
MaeIII GTNAC 1 cut(s) 741
MalI GATC 5 cut(s) 204, 245, 345, 432, 845
MboI GATC 5 cut(s) 202, 243, 343, 430, 843
MboII GAAGA 4 cut(s) 76, 599, 602, 714
MhlI GDGCHC 1 cut(s) 811
MlsI TGGCCA 1 cut(s) 231
MluCI AATT 7 cut(s) 405, 438, 462, 540, 549, 568, 951
MluNI TGGCCA 1 cut(s) 231
MlyI GAGTC 1 cut(s) 333
MmeI TCCRAC 2 cut(s) 470, 809
Mox20I TGGCCA 1 cut(s) 231
MscI TGGCCA 1 cut(s) 231
MseI TTAA 4 cut(s) 408, 626, 954, 1182
MslI CAYNNNNRTG 3 cut(s) 495, 508, 1050
Msp20I TGGCCA 1 cut(s) 231
MspI CCGG 4 cut(s) 194, 222, 537, 738
MspR9I CCNGG 5 cut(s) 84, 222, 537, 738, 739
MvaI CCWGG 1 cut(s) 84
MvnI CGCG 1 cut(s) 30
MwoI GCNNNNNNNGC 5 cut(s) 36, 45, 254, 606, 1142
NciI CCSGG 4 cut(s) 222, 537, 738, 739
NcoI CCATGG 1 cut(s) 1051
NdeI CATATG 1 cut(s) 148
NdeII GATC 5 cut(s) 202, 243, 343, 430, 843
NlaIII CATG 8 cut(s) 95, 331, 350, 494, 579, 899, 1000, 1055
NlaIV GGNNCC 6 cut(s) 297, 535, 784, 824, 864, 915
NmeAIII GCCGAG 1 cut(s) 1081
NmuCI GTSAC 1 cut(s) 741
NspI RCATGY 1 cut(s) 95
PagI TCATGA 2 cut(s) 346, 996
PfeI GAWTC 4 cut(s) 51, 770, 854, 1149
PflMI CCANNNNNTGG 2 cut(s) 291, 923
PfoI TCCNGGA 1 cut(s) 535
PkrI GCNGC 8 cut(s) 73, 131, 178, 280, 502, 913, 1070, 1170
PleI GAGTC 1 cut(s) 332
PmaCI CACGTG 1 cut(s) 746
PmlI CACGTG 1 cut(s) 746
PpsI GAGTC 1 cut(s) 332
Ppu21I YACGTR 1 cut(s) 746
PpuMI RGGWCCY 1 cut(s) 533
PshAI GACNNNNGTC 1 cut(s) 294
PshBI ATTAAT 1 cut(s) 954
PsiI TTATAA 1 cut(s) 1077
Psp5II RGGWCCY 1 cut(s) 533
Psp6I CCWGG 1 cut(s) 82
PspCI CACGTG 1 cut(s) 746
PspFI CCCAGC 1 cut(s) 1164
PspGI CCWGG 1 cut(s) 82
PspN4I GGNNCC 6 cut(s) 297, 535, 784, 824, 864, 915
PspPI GGNCC 4 cut(s) 296, 471, 533, 674
PspPPI RGGWCCY 1 cut(s) 533
RsaI GTAC 2 cut(s) 90, 1215
RsaNI GTAC 2 cut(s) 89, 1214
RseI CAYNNNNRTG 3 cut(s) 495, 508, 1050
SaqAI TTAA 4 cut(s) 408, 626, 954, 1182
SatI GCNGC 8 cut(s) 72, 130, 177, 279, 501, 912, 1069, 1169
Sau3AI GATC 5 cut(s) 202, 243, 343, 430, 843
Sau96I GGNCC 4 cut(s) 296, 471, 533, 674
SchI GAGTC 1 cut(s) 333
ScrFI CCNGG 5 cut(s) 84, 222, 537, 738, 739
SduI GDGCHC 1 cut(s) 811
SexAI ACCWGGT 1 cut(s) 82
SfaNI GCATC 2 cut(s) 487, 1002
SfcI CTRYAG 2 cut(s) 561, 595
SinI GGWCC 3 cut(s) 296, 533, 674
SmaI CCCGGG 1 cut(s) 739
SmiMI CAYNNNNRTG 3 cut(s) 495, 508, 1050
SmlI CTYRAG 2 cut(s) 975, 1231
SmoI CTYRAG 2 cut(s) 975, 1231
Sse9I AATT 7 cut(s) 405, 438, 462, 540, 549, 568, 951
SsiI CCGC 4 cut(s) 176, 279, 500, 911
SspI AATATT 1 cut(s) 1035
SspMI CTAG 5 cut(s) 693, 767, 839, 1137, 1146
StyD4I CCNGG 5 cut(s) 82, 220, 535, 736, 737
StyI CCWWGG 2 cut(s) 467, 1051
TaaI ACNGT 4 cut(s) 200, 337, 596, 1086
TaiI ACGT 2 cut(s) 312, 748
TaqI TCGA 2 cut(s) 54, 667
TasI AATT 7 cut(s) 405, 438, 462, 540, 549, 568, 951
TatI WGTACW 2 cut(s) 88, 1213
TauI GCSGC 4 cut(s) 179, 281, 503, 914
TfiI GAWTC 4 cut(s) 51, 770, 854, 1149
Tru1I TTAA 4 cut(s) 408, 626, 954, 1182
Tru9I TTAA 4 cut(s) 408, 626, 954, 1182
TscAI CASTG 2 cut(s) 340, 481
TseFI GTSAC 1 cut(s) 741
TseI GCWGC 4 cut(s) 71, 129, 1068, 1168
Tsp45I GTSAC 1 cut(s) 741
TspDTI ATGAA 6 cut(s) 23, 77, 363, 644, 648, 1013
TspGWI ACGGA 1 cut(s) 815
TspMI CCCGGG 1 cut(s) 737
TspRI CASTG 2 cut(s) 340, 481
Van91I CCANNNNNTGG 2 cut(s) 291, 923
VpaK11BI GGWCC 3 cut(s) 296, 533, 674
VspI ATTAAT 1 cut(s) 954
XapI RAATTY 3 cut(s) 462, 540, 549
XbaI TCTAGA 1 cut(s) 838
XceI RCATGY 1 cut(s) 95
XmaI CCCGGG 1 cut(s) 737
XmiI GTMKAC 1 cut(s) 928
XspI CTAG 5 cut(s) 693, 767, 839, 1137, 1146
ZraI GACGTC 1 cut(s) 310
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.