Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0007682

Physical Location & Seq

Genomic Coordinates Forward (+)

19516207 .. 19525335

Gene Structure 9129 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00397810.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1914 bp

ATGTGTATCTCTACTCCCTTGTCGTGGCTTTGCCAACCATACCGGACGGTGATCATCATCTGCTACTGCCCGGTGCTGGCCAGTCATTCAAGATCGCTCTCTTTGCCGACCTGCATTTCGGAGAGGCCGCCTCCACCGACTGGGGTCCACTCCAAGATGTCAACTCCCTCAGAGTCATGTCCACTGTGCTTGATCATGAAATCCCAGCGAAATTCGTTTAATCTCAGTGGTGTTGGTCCATTGGATGCTGACAATAGAAATTTAAGCATAGATTTTGTTATCTATCTTGGAGATGTCATCACAGCCAACAATATAGCAATTAAAAATGCAAGCTTGTATTGGGATCAAGCAATTTCTCCAACAAGAGCCAGAGGAATTCCTTGGGCCAGTGTTTTTGGAAACCATGATGATGCGGCATTTGAGTGGCCAATGGAGTGGTTTTCAGGTCCCGGAATTCCTGAAATTCGTTGCCCAGTAGCCAATTCCCCATGCTCAGGAGAAGAAGACTGTAGCTTCAAAGGCACACATCGTCTGGAGTTAATGAAAAATGAGATTGCACTTAGCTCTCTTTCACATTCTCGATATGGTCCTAAAGAACTTTGGCCTAGTGTATCTAACTATGTCCTGCAAGTTTCTTCGTCAAACAATCCCGGGTCACCTGTGGCATTTTTATATTTCCTAGATTCTGGTGGTGGTTCCTACCCAGAAGTTTTATCAAGTGCCCAAGCAGAATGGTTCCGTCGGAAAGCTCTAGAGATCAACCCTGATTCAAGGGTGCCTGAGCTAATCTTTTGGCACATACCAAGTCGTGCTTACAAGAAAGCGGCTCCAAGATTTGGTATACACAAGCCTTGTGTCGGTTCAATTAATAAGGAGAGAGTAGCAACTCAAGACGCTGAAAATGGCATCATGAAACTTTTGGCTGAAAGGGTTTCTGTCAAGCTAGGACAGGCAATATTTGTAGGACACAACCATGGATTGGACTGGTGCTGCCCTTATAAGAAACTGTGGCTATGCTTTGCTCGGCATACTGGTTATGGTGGCTATGGAAACTGGGCTAGAGGAGCTAGAATCATAGAAATCACCCAGCAGCCTTTCTCTATTAAATCTTGGATTAGAATGGAGGATGTTAACGAGGACATAATGGCAAGGACAAAGGGCTGGTTTGGTTGGGTGAAGAGGCTCTTTACTCCAGAATTAAAGACCAACAAGAAAAAGATATCAAACAAGTGGAGATGGATTTTTGGAAGACTTGAACTTCAGCACTACCCTTCTCACGCTGTGCTTACAGCATCAGAAAGAGCATTTCGTGAAGCTACAGAAGAGCAGAAAAAACATGCTTTGACTGTTGCAATAGCAACAGCGGTTGCAGCCAAGGCAGCTGTAGCTGCTGCCCAAGCTGCAGCTGAGGTTGTGCGCCTAACGGGAGCTTCACAATCTTTCCACCATTTCACAAAGTTTGACCGGAACTTGGCTGCCATTAAAATTCAAAGTGCTTATCGCTCGCATCTTTTAGGAGAAGTTGACGAGCAGGCACGGAAAGCATTGCGAGCCTTGCGAGGACTGGTCAGGCTTCAAGCCATAGTTCGTGGTCGAGCTGTGAGACGTCAAGCACTCATATCTTTGAAGCGGTTGCCATCTAATAGAAAAGCGCAGACAGAGCTTTTATGCAGCAGCAGACAGATAAGGTGGGATGACAGTCTGATTTCAAAGGAGGACATTGAAGCAATATGGCTAAGAAAGCAAGAGGCCAGAATCAAAAGAGAGCGGATGAAGAAATACTCGTTCTCCCTCCGGGAAAGCCAGAATGTGAAAATGTTAGAAGATTCAAATGGTAGTACTGATGGAACGTTTGGAACTTCACAAATTAAACTGAGACATTTGAGAAATGAATATTCAGTGGAAGGTCGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003993 GO:0005575 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0042578 GO:0044237

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Metallophos

Protein Analysis

637

Amino Acids

71.74

Weight (kDa)

9.61

Isoelectric Point (pI)

46.35

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007682)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10150 AT3G10150
fragaria_vesca	FvH4_6g24730 FvH4_6g24730 FvH4_6g24730 FvH4_6g24730
malus_domestica	MD12G1085300.v1.1 MD14G1080200.v1.1
prunus_persica	Prupe.7G050500_v2.0.a1
pyrus_communis	pycom12g07220 pycom14g06900 pycom14g06940 pycom14g06960
rosa_chinensis	RchiOBHm_Chr3g0484281
rosa_laevigata	RLG00000023234
rosa_multiflora	Rmu_sc0000295.1_g000007
rosa_roxburghii	Rroxscaffold_6G00397810
rosa_rugosa	Rorug03G0210500 Rorug03G0210500
rosa_samantha	Rh3AG259600 Rh3BG296200 Rh3CG293700 Rh3DG289600
rosa_wichuraiana	Rw3G023410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	999
AatII	GACGTC	1 cut(s)	1609
Acc36I	ACCTGC	1 cut(s)	119
AccB1I	GGYRCC	1 cut(s)	775
AccB7I	CCANNNNNTGG	3 cut(s)	140, 836, 979
AccBSI	CCGCTC	1 cut(s)	1768
AccI	GTMKAC	1 cut(s)	841
AciI	CCGC	6 cut(s)	128, 413, 824, 1364, 1630, 1768
AclI	AACGTT	1 cut(s)	1850
AclWI	GGATC	1 cut(s)	351
AcoI	YGGCCR	2 cut(s)	78, 425
AcsI	RAATTY	6 cut(s)	211, 259, 375, 453, 462, 1485
AcuI	CTGAAG	1 cut(s)	1244
AcyI	GRCGYC	1 cut(s)	1606
AdeI	CACNNNGTG	1 cut(s)	1282
AfaI	GTAC	1 cut(s)	1840
AfiI	CCNNNNNNNGG	8 cut(s)	24, 76, 140, 494, 836, 857, 979, 1471
Alw26I	GTCTC	2 cut(s)	1597, 1870
AlwI	GGATC	1 cut(s)	351
Ama87I	CYCGRG	1 cut(s)	650
AoxI	GGCC	6 cut(s)	78, 125, 384, 425, 602, 1749
ApoI	RAATTY	6 cut(s)	211, 259, 375, 453, 462, 1485
ArsI	GACNNNNNNTTYG	2 cut(s)	100, 132
AseI	ATTAAT	1 cut(s)	867
AspLEI	GCGC	2 cut(s)	1419, 1654
AspS9I	GGNCC	5 cut(s)	145, 236, 384, 446, 587
AsuC2I	CCSGG	5 cut(s)	71, 450, 651, 652, 1796
AsuHPI	GGTGA	4 cut(s)	61, 648, 1075, 1186
AvaI	CYCGRG	1 cut(s)	650
AvaII	GGWCC	4 cut(s)	145, 236, 446, 587
BaeGI	GKGCMC	1 cut(s)	724
BalI	TGGCCA	2 cut(s)	80, 427
BanI	GGYRCC	1 cut(s)	775
BbsI	GAAGAC	2 cut(s)	510, 1255
BbvCI	CCTCAGC	1 cut(s)	1407
BccI	CCATC	3 cut(s)	1230, 1645, 1838
BclI	TGATCA	2 cut(s)	51, 192
BcnI	CCSGG	5 cut(s)	71, 450, 651, 652, 1796
BcoDI	GTCTC	2 cut(s)	1597, 1870
BfaI	CTAG	6 cut(s)	606, 680, 752, 944, 1059, 1068
BfmI	CTRYAG	4 cut(s)	508, 1317, 1383, 1401
BfuAI	ACCTGC	1 cut(s)	119
BmcAI	AGTACT	1 cut(s)	1840
Bme1390I	CCNGG	5 cut(s)	71, 450, 651, 652, 1796
Bme18I	GGWCC	4 cut(s)	145, 236, 446, 587
BmeT110I	CYCGRG	1 cut(s)	650
BmgT120I	GGNCC	5 cut(s)	145, 236, 384, 446, 587
BmiI	GGNNCC	6 cut(s)	146, 448, 697, 737, 777, 828
BmrFI	CCNGG	5 cut(s)	71, 450, 651, 652, 1796
BmrI	ACTGGG	3 cut(s)	150, 467, 1063
BmsI	GCATC	5 cut(s)	235, 400, 915, 1301, 1516
BmuI	ACTGGG	3 cut(s)	150, 467, 1063
BoxI	GACNNNNGTC	1 cut(s)	143
BpiI	GAAGAC	2 cut(s)	510, 1255
BplI	GAGNNNNNCTC	2 cut(s)	115, 147
BpmI	CTGGAG	2 cut(s)	554, 1176
Bpu10I	CCTNAGC	3 cut(s)	493, 780, 1407
BpuEI	CTTGAG	1 cut(s)	873
BpuMI	CCSGG	5 cut(s)	71, 450, 651, 652, 1796
BsaBI	GATNNNNATC	1 cut(s)	56
BsaHI	GRCGYC	1 cut(s)	1606
BsaJI	CCNNGG	4 cut(s)	380, 650, 973, 1374
BsaWI	WCCGGW	2 cut(s)	42, 1464
BsaXI	ACNNNNNCTCC	2 cut(s)	1772, 1802
Bsc4I	CCNNNNNNNGG	8 cut(s)	24, 76, 140, 494, 836, 857, 979, 1471
Bse1I	ACTGG	8 cut(s)	81, 145, 387, 473, 989, 1036, 1058, 1569
Bse3DI	GCAATG	1 cut(s)	1544
Bse8I	GATNNNNATC	1 cut(s)	56
BseDI	CCNNGG	4 cut(s)	380, 650, 973, 1374
BseGI	GGATG	4 cut(s)	250, 1132, 1699, 1776
BseJI	GATNNNNATC	1 cut(s)	56
BseLI	CCNNNNNNNGG	8 cut(s)	24, 76, 140, 494, 836, 857, 979, 1471
BseMI	GCAATG	1 cut(s)	1544
BseMII	CTCAG	6 cut(s)	183, 238, 507, 771, 1398, 1865
BseNI	ACTGG	8 cut(s)	81, 145, 387, 473, 989, 1036, 1058, 1569
BseRI	GAGGAG	1 cut(s)	1077
BseSI	GKGCMC	1 cut(s)	724
BseYI	CCCAGC	2 cut(s)	204, 1086
BshFI	GGCC	6 cut(s)	80, 127, 386, 427, 604, 1751
BshNI	GGYRCC	1 cut(s)	775
BsiHKCI	CYCGRG	1 cut(s)	650
BsiSI	CCGG	6 cut(s)	43, 71, 450, 651, 1465, 1795
BslFI	GGGAC	1 cut(s)	432
BslI	CCNNNNNNNGG	8 cut(s)	24, 76, 140, 494, 836, 857, 979, 1471
BsmAI	GTCTC	2 cut(s)	1597, 1870
BsmBI	CGTCTC	1 cut(s)	1597
BsmFI	GGGAC	1 cut(s)	432
BsnI	GGCC	6 cut(s)	80, 127, 386, 427, 604, 1751
BsoBI	CYCGRG	1 cut(s)	650
Bsp1286I	GDGCHC	1 cut(s)	724
Bsp143I	GATC	5 cut(s)	51, 92, 192, 343, 756
Bsp19I	CCATGG	1 cut(s)	973
BspACI	CCGC	6 cut(s)	128, 413, 824, 1364, 1630, 1768
BspANI	GGCC	6 cut(s)	80, 127, 386, 427, 604, 1751
BspCNI	CTCAG	6 cut(s)	182, 237, 506, 772, 1399, 1866
BspHI	TCATGA	2 cut(s)	195, 909
BspLI	GGNNCC	6 cut(s)	146, 448, 697, 737, 777, 828
BspMAI	CTGCAG	1 cut(s)	1405
BspMI	ACCTGC	1 cut(s)	119
BspPI	GGATC	1 cut(s)	351
BspQI	GCTCTTC	1 cut(s)	1317
BspT107I	GGYRCC	1 cut(s)	775
BsrBI	CCGCTC	1 cut(s)	1768
BsrDI	GCAATG	1 cut(s)	1544
BsrI	ACTGG	8 cut(s)	81, 145, 387, 473, 989, 1036, 1058, 1569
BssECI	CCNNGG	4 cut(s)	380, 650, 973, 1374
BssMI	GATC	5 cut(s)	51, 92, 192, 343, 756
BssNAI	GTATAC	1 cut(s)	842
BssNI	GRCGYC	1 cut(s)	1606
BssT1I	CCWWGG	3 cut(s)	380, 973, 1374
Bst1107I	GTATAC	1 cut(s)	842
Bst4CI	ACNGT	6 cut(s)	49, 186, 509, 1008, 1348, 1700
Bst6I	CTCTTC	2 cut(s)	1172, 1317
BstACI	GRCGYC	1 cut(s)	1606
BstC8I	GCNNGC	5 cut(s)	78, 331, 1505, 1533, 1551
BstDEI	CTNAG	8 cut(s)	169, 224, 493, 560, 780, 1407, 1736, 1874
BstDSI	CCRYGG	1 cut(s)	973
BstEII	GGTNACC	1 cut(s)	654
BstF5I	GGATG	4 cut(s)	250, 1132, 1699, 1776
BstHHI	GCGC	2 cut(s)	1419, 1654
BstKTI	GATC	5 cut(s)	54, 95, 195, 346, 759
BstMAI	GTCTC	2 cut(s)	1597, 1870
BstMBI	GATC	5 cut(s)	51, 92, 192, 343, 756
BstNSI	RCATGY	1 cut(s)	1340
BstPAI	GACNNNNGTC	1 cut(s)	143
BstPI	GGTNACC	1 cut(s)	654
BstSCI	CCNGG	5 cut(s)	69, 448, 649, 650, 1794
BstSFI	CTRYAG	4 cut(s)	508, 1317, 1383, 1401
BstSLI	GKGCMC	1 cut(s)	724
BstV2I	GAAGAC	2 cut(s)	510, 1255
BstXI	CCANNNNNNTGG	1 cut(s)	435
BstZ17I	GTATAC	1 cut(s)	842
BsuRI	GGCC	6 cut(s)	80, 127, 386, 427, 604, 1751
BtgI	CCRYGG	1 cut(s)	973
BtsCI	GGATG	4 cut(s)	250, 1132, 1699, 1776
BtsIMutI	CAGTG	4 cut(s)	182, 232, 394, 1905
BveI	ACCTGC	1 cut(s)	119
Cac8I	GCNNGC	5 cut(s)	78, 331, 1505, 1533, 1551
CciI	TCATGA	2 cut(s)	195, 909
CfoI	GCGC	2 cut(s)	1419, 1654
Cfr13I	GGNCC	5 cut(s)	145, 236, 384, 446, 587
Cfr9I	CCCGGG	1 cut(s)	650
CseI	GACGC	1 cut(s)	902
Csp6I	GTAC	1 cut(s)	1839
CspCI	CAANNNNNGTGG	2 cut(s)	171, 206
CviAII	CATG	7 cut(s)	177, 196, 404, 489, 910, 974, 1337
CviQI	GTAC	1 cut(s)	1839
DdeI	CTNAG	8 cut(s)	169, 224, 493, 560, 780, 1407, 1736, 1874
DpnI	GATC	5 cut(s)	53, 94, 194, 345, 758
DpnII	GATC	5 cut(s)	51, 92, 192, 343, 756
DraIII	CACNNNGTG	1 cut(s)	1282
EaeI	YGGCCR	2 cut(s)	78, 425
Eam1104I	CTCTTC	2 cut(s)	1172, 1317
EarI	CTCTTC	2 cut(s)	1172, 1317
Eco130I	CCWWGG	3 cut(s)	380, 973, 1374
Eco32I	GATATC	1 cut(s)	1221
Eco47I	GGWCC	4 cut(s)	145, 236, 446, 587
Eco57I	CTGAAG	1 cut(s)	1244
Eco88I	CYCGRG	1 cut(s)	650
Eco91I	GGTNACC	1 cut(s)	654
EcoO109I	RGGNCCY	1 cut(s)	446
EcoO65I	GGTNACC	1 cut(s)	654
EcoRI	GAATTC	2 cut(s)	375, 453
EcoRV	GATATC	1 cut(s)	1221
EcoT14I	CCWWGG	3 cut(s)	380, 973, 1374
ErhI	CCWWGG	3 cut(s)	380, 973, 1374
Esp3I	CGTCTC	1 cut(s)	1597
FaeI	CATG	7 cut(s)	180, 199, 407, 492, 913, 977, 1340
FalI	AAGNNNNNCTT	4 cut(s)	796, 828, 1169, 1201
FaqI	GGGAC	1 cut(s)	432
FatI	CATG	7 cut(s)	176, 195, 403, 488, 909, 973, 1336
FbaI	TGATCA	2 cut(s)	51, 192
FblI	GTMKAC	1 cut(s)	841
FokI	GGATG	4 cut(s)	257, 1139, 1706, 1783
FspBI	CTAG	6 cut(s)	606, 680, 752, 944, 1059, 1068
GlaI	GCGC	2 cut(s)	1418, 1653
GsaI	CCCAGC	2 cut(s)	208, 1090
GsuI	CTGGAG	2 cut(s)	554, 1176
HaeIII	GGCC	6 cut(s)	80, 127, 386, 427, 604, 1751
HapII	CCGG	6 cut(s)	43, 71, 450, 651, 1465, 1795
HgaI	GACGC	1 cut(s)	902
HhaI	GCGC	2 cut(s)	1419, 1654
Hin1I	GRCGYC	1 cut(s)	1606
Hin1II	CATG	7 cut(s)	180, 199, 407, 492, 913, 977, 1340
Hin6I	GCGC	2 cut(s)	1417, 1652
HinP1I	GCGC	2 cut(s)	1417, 1652
HincII	GTYRAC	3 cut(s)	162, 1132, 1525
HindII	GTYRAC	3 cut(s)	162, 1132, 1525
HindIII	AAGCTT	1 cut(s)	331
HinfI	GANTC	6 cut(s)	173, 683, 767, 1071, 1755, 1826
HpaI	GTTAAC	1 cut(s)	1132
HpaII	CCGG	6 cut(s)	43, 71, 450, 651, 1465, 1795
HphI	GGTGA	4 cut(s)	61, 648, 1075, 1186
Hpy166II	GTNNAC	6 cut(s)	148, 162, 182, 842, 1132, 1525
Hpy188I	TCNGA	5 cut(s)	121, 172, 744, 1297, 1704
Hpy8I	GTNNAC	6 cut(s)	148, 162, 182, 842, 1132, 1525
Hpy99I	CGWCG	1 cut(s)	744
HpyAV	CCTTC	2 cut(s)	1281, 1898
HpyCH4III	ACNGT	6 cut(s)	49, 186, 509, 1008, 1348, 1700
HpyCH4IV	ACGT	2 cut(s)	1606, 1850
HpyCH4V	TGCA	8 cut(s)	114, 329, 557, 628, 1352, 1370, 1403, 1671
HpyF3I	CTNAG	8 cut(s)	169, 224, 493, 560, 780, 1407, 1736, 1874
HpySE526I	ACGT	2 cut(s)	1606, 1850
Hsp92I	GRCGYC	1 cut(s)	1606
Hsp92II	CATG	7 cut(s)	180, 199, 407, 492, 913, 977, 1340
HspAI	GCGC	2 cut(s)	1417, 1652
Ksp22I	TGATCA	2 cut(s)	51, 192
KspAI	GTTAAC	1 cut(s)	1132
Kzo9I	GATC	5 cut(s)	51, 92, 192, 343, 756
LguI	GCTCTTC	1 cut(s)	1317
LmnI	GCTCC	3 cut(s)	832, 1064, 1427
LweI	GCATC	5 cut(s)	235, 400, 915, 1301, 1516
MaeI	CTAG	6 cut(s)	606, 680, 752, 944, 1059, 1068
MaeII	ACGT	2 cut(s)	1606, 1850
MaeIII	GTNAC	1 cut(s)	654
MalI	GATC	5 cut(s)	53, 94, 194, 345, 758
MbiI	CCGCTC	1 cut(s)	1768
MboI	GATC	5 cut(s)	51, 92, 192, 343, 756
MboII	GAAGA	8 cut(s)	512, 515, 627, 1189, 1260, 1334, 1786, 1835
MhlI	GDGCHC	1 cut(s)	724
MlsI	TGGCCA	2 cut(s)	80, 427
MluNI	TGGCCA	2 cut(s)	80, 427
MlyI	GAGTC	1 cut(s)	182
MmeI	TCCRAC	2 cut(s)	383, 722
Mox20I	TGGCCA	2 cut(s)	80, 427
MscI	TGGCCA	2 cut(s)	80, 427
MslI	CAYNNNNRTG	3 cut(s)	408, 421, 972
Msp20I	TGGCCA	2 cut(s)	80, 427
MspA1I	CMGCKG	3 cut(s)	1364, 1382, 1406
MspI	CCGG	6 cut(s)	43, 71, 450, 651, 1465, 1795
MspR9I	CCNGG	5 cut(s)	71, 450, 651, 652, 1796
NciI	CCSGG	5 cut(s)	71, 450, 651, 652, 1796
NcoI	CCATGG	1 cut(s)	973
NdeII	GATC	5 cut(s)	51, 92, 192, 343, 756
NlaIII	CATG	7 cut(s)	180, 199, 407, 492, 913, 977, 1340
NlaIV	GGNNCC	6 cut(s)	146, 448, 697, 737, 777, 828
NmeAIII	GCCGAG	1 cut(s)	1003
NmuCI	GTSAC	1 cut(s)	654
NspI	RCATGY	1 cut(s)	1340
PagI	TCATGA	2 cut(s)	195, 909
PciSI	GCTCTTC	1 cut(s)	1317
PfeI	GAWTC	5 cut(s)	683, 767, 1071, 1755, 1826
PflMI	CCANNNNNTGG	3 cut(s)	140, 836, 979
PfoI	TCCNGGA	2 cut(s)	448, 1794
PleI	GAGTC	1 cut(s)	181
PpsI	GAGTC	1 cut(s)	181
PpuMI	RGGWCCY	1 cut(s)	446
PshAI	GACNNNNGTC	1 cut(s)	143
PshBI	ATTAAT	1 cut(s)	867
PsiI	TTATAA	1 cut(s)	999
Psp1406I	AACGTT	1 cut(s)	1850
Psp5II	RGGWCCY	1 cut(s)	446
PspEI	GGTNACC	1 cut(s)	654
PspFI	CCCAGC	2 cut(s)	204, 1086
PspN4I	GGNNCC	6 cut(s)	146, 448, 697, 737, 777, 828
PspPI	GGNCC	5 cut(s)	145, 236, 384, 446, 587
PspPPI	RGGWCCY	1 cut(s)	446
PstI	CTGCAG	1 cut(s)	1405
PvuII	CAGCTG	2 cut(s)	1382, 1406
RsaI	GTAC	1 cut(s)	1840
RsaNI	GTAC	1 cut(s)	1839
RseI	CAYNNNNRTG	3 cut(s)	408, 421, 972
SapI	GCTCTTC	1 cut(s)	1317
Sau3AI	GATC	5 cut(s)	51, 92, 192, 343, 756
Sau96I	GGNCC	5 cut(s)	145, 236, 384, 446, 587
ScaI	AGTACT	1 cut(s)	1840
SchI	GAGTC	1 cut(s)	182
ScrFI	CCNGG	5 cut(s)	71, 450, 651, 652, 1796
SduI	GDGCHC	1 cut(s)	724
SfaNI	GCATC	5 cut(s)	235, 400, 915, 1301, 1516
SfcI	CTRYAG	4 cut(s)	508, 1317, 1383, 1401
SinI	GGWCC	4 cut(s)	145, 236, 446, 587
SmaI	CCCGGG	1 cut(s)	652
SmiMI	CAYNNNNRTG	3 cut(s)	408, 421, 972
SmlI	CTYRAG	1 cut(s)	888
SmoI	CTYRAG	1 cut(s)	888
SsiI	CCGC	6 cut(s)	128, 413, 824, 1364, 1630, 1768
SspI	AATATT	2 cut(s)	957, 1895
SspMI	CTAG	6 cut(s)	606, 680, 752, 944, 1059, 1068
StyD4I	CCNGG	5 cut(s)	69, 448, 649, 650, 1794
StyI	CCWWGG	3 cut(s)	380, 973, 1374
TaaI	ACNGT	6 cut(s)	49, 186, 509, 1008, 1348, 1700
TaiI	ACGT	2 cut(s)	1609, 1853
TaqI	TCGA	3 cut(s)	580, 1594, 1909
TatI	WGTACW	1 cut(s)	1838
TauI	GCSGC	3 cut(s)	130, 416, 827
TfiI	GAWTC	5 cut(s)	683, 767, 1071, 1755, 1826
TscAI	CASTG	4 cut(s)	189, 232, 394, 1905
TseFI	GTSAC	1 cut(s)	654
Tsp45I	GTSAC	1 cut(s)	654
TspDTI	ATGAA	5 cut(s)	212, 557, 926, 1787, 1905
TspGWI	ACGGA	2 cut(s)	728, 1552
TspMI	CCCGGG	1 cut(s)	650
TspRI	CASTG	4 cut(s)	189, 232, 394, 1905
Van91I	CCANNNNNTGG	3 cut(s)	140, 836, 979
VpaK11BI	GGWCC	4 cut(s)	145, 236, 446, 587
VspI	ATTAAT	1 cut(s)	867
XapI	RAATTY	6 cut(s)	211, 259, 375, 453, 462, 1485
XbaI	TCTAGA	1 cut(s)	751
XceI	RCATGY	1 cut(s)	1340
XmaI	CCCGGG	1 cut(s)	650
XmiI	GTMKAC	1 cut(s)	841
XspI	CTAG	6 cut(s)	606, 680, 752, 944, 1059, 1068
ZraI	GACGTC	1 cut(s)	1607
ZrmI	AGTACT	1 cut(s)	1840

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.