Rh3BG296200
NAC Family

inactive purple acid phosphatase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
OG0007682
Physical Location & Seq
Reverse (-)
29721171 .. 29725353
4183 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG296200.1

Sequence Viewer

Length: 987 bp
ATGATGATGATGATGATGATGGGAAGAAGGGTGAGGGTGTTGTGCTGCTTCACCACCTTTACATATGTGTATCTCTACTCCCTTGTCGTGGCGGCTTTGCCAACCATACCGGACGGTGATCACCATCTGCTACTGCCCGGTGCTGGCGAGTCATTCAAGATCGCTCTCTTTGCCGACCTGCATTTCGGAGAGGCCGCCTCCACCGACTGGGGTCCACTCCAAGATGTCAACTCCCTCAGAGTCATGTCCACTGTGCTTGATCATGAAATCCCAGATTTTGTTATCTATCTTGGAGATGTCATCACAGCCAACAATATAGCAATTAAAAATGCAAGCTTGTATTGGGATCAGGCAATTTCTCCAACAAGAGCCAGAGGAATTCCTTGGGCCAGTGTTTTTGGAAACCATGATGATGCGGCATTTGAGTGGCCGATGGAGTGGTTTTCAGGTCCCGGAATTCCTGAAATTCGTTGCTCTGTAGCCAATTCCTCATGCTCAGGAGAAGAAGACTGTAGCTTCAAAGGCACACATCGTCTGGAGTTGATGAAAAATGAGATTGCACTTAGCCCTCTTTCATATTCTCGATATGGTCCTAAAGAACTTTGGCCTAGTGTATCTAACTATGTCCTCCAAGTTTCTTCGTCAAACAATCCCGGGTCACCTGTGGCATTTTTATATTTCCTAGATTCTGGTGGTGGTTCCTACCCAGAAGTTTTATCAAGTGCCCAAGCAGAATGGTTCCGTCAGAAAGCTCTAGAGATCAACCCTGATTCAAGGGTGCCTGAGCTAATCTTTTGGCATATACCAAGTCGTGCTTACAAGAAAGCAGCTCCAAGATTTGGTATACACAAGCCTTGTGTCGGTTCAATTAATAAGGAGAGAGTAGCAACTCAAGACGCTGAAAATGGCATCATGAAACTTTTGGCTGAAAGGGTTTCTGTCAAGGTGAGTTCAAACTTTTTTTTTTTTTTTTGTCATGTACCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0003993 GO:0005575 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0042578 GO:0044237
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Metallophos

Protein Analysis

328

Amino Acids

36.55

Weight (kDa)

5.85

Isoelectric Point (pI)

33.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Metallophos PF00149 52 - 271 5.4e-08 Calcineurin-like phosphoesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 186
AccB1I GGYRCC 1 cut(s) 778
AccB7I CCANNNNNTGG 2 cut(s) 207, 839
AccI GTMKAC 1 cut(s) 844
AciI CCGC 3 cut(s) 92, 195, 416
AclWI GGATC 1 cut(s) 354
AcoI YGGCCR 1 cut(s) 428
AcsI RAATTY 3 cut(s) 378, 456, 465
AfaI GTAC 1 cut(s) 981
AfiI CCNNNNNNNGG 5 cut(s) 88, 143, 207, 839, 860
AgsI TTSAA 5 cut(s) 157, 520, 774, 867, 954
AluBI AGCT 5 cut(s) 336, 516, 752, 787, 830
AluI AGCT 5 cut(s) 336, 516, 752, 787, 830
AlwI GGATC 1 cut(s) 354
Ama87I CYCGRG 1 cut(s) 653
AoxI GGCC 4 cut(s) 192, 387, 428, 605
ApeKI GCWGC 2 cut(s) 45, 827
ApoI RAATTY 3 cut(s) 378, 456, 465
ArsI GACNNNNNNTTYG 2 cut(s) 167, 199
AseI ATTAAT 1 cut(s) 870
AspS9I GGNCC 4 cut(s) 212, 387, 449, 590
AsuC2I CCSGG 4 cut(s) 138, 453, 654, 655
AsuHPI GGTGA 6 cut(s) 43, 43, 113, 128, 651, 958
AvaI CYCGRG 1 cut(s) 653
AvaII GGWCC 3 cut(s) 212, 449, 590
BaeGI GKGCMC 1 cut(s) 727
BanI GGYRCC 1 cut(s) 778
BbsI GAAGAC 1 cut(s) 513
BbvI GCAGC 2 cut(s) 32, 839
BccI CCATC 3 cut(s) 13, 132, 427
BclI TGATCA 2 cut(s) 118, 259
BcnI CCSGG 4 cut(s) 138, 453, 654, 655
BfaI CTAG 3 cut(s) 609, 683, 755
BfmI CTRYAG 2 cut(s) 477, 511
BfuAI ACCTGC 1 cut(s) 186
BisI GCNGC 5 cut(s) 46, 93, 195, 417, 828
BlsI GCNGC 5 cut(s) 47, 94, 196, 418, 829
Bme1390I CCNGG 4 cut(s) 138, 453, 654, 655
Bme18I GGWCC 3 cut(s) 212, 449, 590
BmeT110I CYCGRG 1 cut(s) 653
BmgT120I GGNCC 4 cut(s) 212, 387, 449, 590
BmiI GGNNCC 5 cut(s) 213, 451, 700, 740, 780
BmrFI CCNGG 4 cut(s) 138, 453, 654, 655
BmrI ACTGGG 1 cut(s) 217
BmsI GCATC 2 cut(s) 403, 918
BmuI ACTGGG 1 cut(s) 217
BoxI GACNNNNGTC 1 cut(s) 210
BpiI GAAGAC 1 cut(s) 513
BplI GAGNNNNNCTC 2 cut(s) 182, 214
BpmI CTGGAG 1 cut(s) 557
Bpu10I CCTNAGC 2 cut(s) 496, 783
BpuEI CTTGAG 1 cut(s) 876
BpuMI CCSGG 4 cut(s) 138, 453, 654, 655
BsaBI GATNNNNATC 1 cut(s) 123
BsaJI CCNNGG 2 cut(s) 383, 653
BsaWI WCCGGW 1 cut(s) 109
Bsc4I CCNNNNNNNGG 5 cut(s) 88, 143, 207, 839, 860
Bse1I ACTGG 2 cut(s) 212, 390
Bse8I GATNNNNATC 1 cut(s) 123
BseDI CCNNGG 2 cut(s) 383, 653
BseJI GATNNNNATC 1 cut(s) 123
BseLI CCNNNNNNNGG 5 cut(s) 88, 143, 207, 839, 860
BseMII CTCAG 3 cut(s) 250, 510, 774
BseNI ACTGG 2 cut(s) 212, 390
BseSI GKGCMC 1 cut(s) 727
BseXI GCAGC 2 cut(s) 32, 839
BshFI GGCC 4 cut(s) 194, 389, 430, 607
BshNI GGYRCC 1 cut(s) 778
BsiHKCI CYCGRG 1 cut(s) 653
BsiSI CCGG 4 cut(s) 110, 138, 453, 654
BslFI GGGAC 1 cut(s) 435
BslI CCNNNNNNNGG 5 cut(s) 88, 143, 207, 839, 860
BsmFI GGGAC 1 cut(s) 435
BsnI GGCC 4 cut(s) 194, 389, 430, 607
BsoBI CYCGRG 1 cut(s) 653
Bsp1286I GDGCHC 1 cut(s) 727
Bsp143I GATC 5 cut(s) 118, 159, 259, 346, 759
BspACI CCGC 3 cut(s) 92, 195, 416
BspANI GGCC 4 cut(s) 194, 389, 430, 607
BspCNI CTCAG 3 cut(s) 249, 509, 775
BspHI TCATGA 2 cut(s) 262, 912
BspLI GGNNCC 5 cut(s) 213, 451, 700, 740, 780
BspMI ACCTGC 1 cut(s) 186
BspPI GGATC 1 cut(s) 354
BspT107I GGYRCC 1 cut(s) 778
BsrI ACTGG 2 cut(s) 212, 390
BssECI CCNNGG 2 cut(s) 383, 653
BssMI GATC 5 cut(s) 118, 159, 259, 346, 759
BssNAI GTATAC 1 cut(s) 845
BssT1I CCWWGG 1 cut(s) 383
Bst1107I GTATAC 1 cut(s) 845
Bst4CI ACNGT 3 cut(s) 116, 253, 512
BstC8I GCNNGC 2 cut(s) 145, 334
BstDEI CTNAG 4 cut(s) 236, 496, 563, 783
BstEII GGTNACC 1 cut(s) 657
BstKTI GATC 5 cut(s) 121, 162, 262, 349, 762
BstMBI GATC 5 cut(s) 118, 159, 259, 346, 759
BstMWI GCNNNNNNNGC 2 cut(s) 170, 522
BstPAI GACNNNNGTC 1 cut(s) 210
BstPI GGTNACC 1 cut(s) 657
BstSCI CCNGG 4 cut(s) 136, 451, 652, 653
BstSFI CTRYAG 2 cut(s) 477, 511
BstSLI GKGCMC 1 cut(s) 727
BstV1I GCAGC 2 cut(s) 32, 839
BstV2I GAAGAC 1 cut(s) 513
BstZ17I GTATAC 1 cut(s) 845
BsuRI GGCC 4 cut(s) 194, 389, 430, 607
BtsIMutI CAGTG 2 cut(s) 249, 397
BveI ACCTGC 1 cut(s) 186
Cac8I GCNNGC 2 cut(s) 145, 334
CciI TCATGA 2 cut(s) 262, 912
Cfr13I GGNCC 4 cut(s) 212, 387, 449, 590
Cfr9I CCCGGG 1 cut(s) 653
CseI GACGC 1 cut(s) 905
Csp6I GTAC 1 cut(s) 980
CspCI CAANNNNNGTGG 2 cut(s) 238, 273
CviAII CATG 6 cut(s) 244, 263, 407, 492, 913, 977
CviQI GTAC 1 cut(s) 980
DdeI CTNAG 4 cut(s) 236, 496, 563, 783
DpnI GATC 5 cut(s) 120, 161, 261, 348, 761
DpnII GATC 5 cut(s) 118, 159, 259, 346, 759
EaeI YGGCCR 1 cut(s) 428
Eco130I CCWWGG 1 cut(s) 383
Eco47I GGWCC 3 cut(s) 212, 449, 590
Eco88I CYCGRG 1 cut(s) 653
Eco91I GGTNACC 1 cut(s) 657
EcoO109I RGGNCCY 1 cut(s) 449
EcoO65I GGTNACC 1 cut(s) 657
EcoRI GAATTC 2 cut(s) 378, 456
EcoT14I CCWWGG 1 cut(s) 383
ErhI CCWWGG 1 cut(s) 383
FaeI CATG 6 cut(s) 247, 266, 410, 495, 916, 980
FalI AAGNNNNNCTT 2 cut(s) 799, 831
FaqI GGGAC 1 cut(s) 435
FatI CATG 6 cut(s) 243, 262, 406, 491, 912, 976
FauNDI CATATG 1 cut(s) 64
FbaI TGATCA 2 cut(s) 118, 259
FblI GTMKAC 1 cut(s) 844
Fnu4HI GCNGC 5 cut(s) 46, 93, 195, 417, 828
Fsp4HI GCNGC 5 cut(s) 46, 93, 195, 417, 828
FspBI CTAG 3 cut(s) 609, 683, 755
GluI GCNGC 5 cut(s) 46, 93, 195, 417, 828
GsuI CTGGAG 1 cut(s) 557
HaeIII GGCC 4 cut(s) 194, 389, 430, 607
HapII CCGG 4 cut(s) 110, 138, 453, 654
HgaI GACGC 1 cut(s) 905
Hin1II CATG 6 cut(s) 247, 266, 410, 495, 916, 980
HincII GTYRAC 1 cut(s) 229
HindII GTYRAC 1 cut(s) 229
HindIII AAGCTT 1 cut(s) 334
HinfI GANTC 4 cut(s) 149, 240, 686, 770
HpaII CCGG 4 cut(s) 110, 138, 453, 654
HphI GGTGA 6 cut(s) 43, 43, 113, 128, 651, 958
Hpy166II GTNNAC 4 cut(s) 215, 229, 249, 845
Hpy188I TCNGA 3 cut(s) 188, 239, 747
Hpy188III TCNNGA 9 cut(s) 157, 263, 461, 498, 536, 582, 755, 893, 913
Hpy8I GTNNAC 4 cut(s) 215, 229, 249, 845
HpyAV CCTTC 1 cut(s) 21
HpyCH4III ACNGT 3 cut(s) 116, 253, 512
HpyCH4V TGCA 3 cut(s) 181, 332, 560
HpyF10VI GCNNNNNNNGC 2 cut(s) 170, 522
HpyF3I CTNAG 4 cut(s) 236, 496, 563, 783
Hsp92II CATG 6 cut(s) 247, 266, 410, 495, 916, 980
Ksp22I TGATCA 2 cut(s) 118, 259
Kzo9I GATC 5 cut(s) 118, 159, 259, 346, 759
LmnI GCTCC 1 cut(s) 835
Lsp1109I GCAGC 2 cut(s) 32, 839
LweI GCATC 2 cut(s) 403, 918
MaeI CTAG 3 cut(s) 609, 683, 755
MaeIII GTNAC 1 cut(s) 657
MalI GATC 5 cut(s) 120, 161, 261, 348, 761
MboI GATC 5 cut(s) 118, 159, 259, 346, 759
MboII GAAGA 4 cut(s) 36, 515, 518, 630
MhlI GDGCHC 1 cut(s) 727
MluCI AATT 7 cut(s) 321, 354, 378, 456, 465, 484, 867
MlyI GAGTC 2 cut(s) 158, 249
MmeI TCCRAC 1 cut(s) 386
MnlI CCTC 8 cut(s) 27, 184, 208, 245, 368, 499, 579, 638
MseI TTAA 2 cut(s) 324, 870
MslI CAYNNNNRTG 2 cut(s) 411, 424
MspI CCGG 4 cut(s) 110, 138, 453, 654
MspR9I CCNGG 4 cut(s) 138, 453, 654, 655
MwoI GCNNNNNNNGC 2 cut(s) 170, 522
NciI CCSGG 4 cut(s) 138, 453, 654, 655
NdeI CATATG 1 cut(s) 64
NdeII GATC 5 cut(s) 118, 159, 259, 346, 759
NlaIII CATG 6 cut(s) 247, 266, 410, 495, 916, 980
NlaIV GGNNCC 5 cut(s) 213, 451, 700, 740, 780
NmuCI GTSAC 1 cut(s) 657
PagI TCATGA 2 cut(s) 262, 912
PfeI GAWTC 2 cut(s) 686, 770
PflMI CCANNNNNTGG 2 cut(s) 207, 839
PfoI TCCNGGA 1 cut(s) 451
PkrI GCNGC 5 cut(s) 47, 94, 196, 418, 829
PleI GAGTC 2 cut(s) 157, 248
PpsI GAGTC 2 cut(s) 157, 248
PpuMI RGGWCCY 1 cut(s) 449
PshAI GACNNNNGTC 1 cut(s) 210
PshBI ATTAAT 1 cut(s) 870
Psp5II RGGWCCY 1 cut(s) 449
PspEI GGTNACC 1 cut(s) 657
PspN4I GGNNCC 5 cut(s) 213, 451, 700, 740, 780
PspPI GGNCC 4 cut(s) 212, 387, 449, 590
PspPPI RGGWCCY 1 cut(s) 449
RsaI GTAC 1 cut(s) 981
RsaNI GTAC 1 cut(s) 980
RseI CAYNNNNRTG 2 cut(s) 411, 424
SaqAI TTAA 2 cut(s) 324, 870
SatI GCNGC 5 cut(s) 46, 93, 195, 417, 828
Sau3AI GATC 5 cut(s) 118, 159, 259, 346, 759
Sau96I GGNCC 4 cut(s) 212, 387, 449, 590
SchI GAGTC 2 cut(s) 158, 249
ScrFI CCNGG 4 cut(s) 138, 453, 654, 655
SduI GDGCHC 1 cut(s) 727
SfaNI GCATC 2 cut(s) 403, 918
SfcI CTRYAG 2 cut(s) 477, 511
SinI GGWCC 3 cut(s) 212, 449, 590
SmaI CCCGGG 1 cut(s) 655
SmiMI CAYNNNNRTG 2 cut(s) 411, 424
SmlI CTYRAG 1 cut(s) 891
SmoI CTYRAG 1 cut(s) 891
Sse9I AATT 7 cut(s) 321, 354, 378, 456, 465, 484, 867
SsiI CCGC 3 cut(s) 92, 195, 416
SspMI CTAG 3 cut(s) 609, 683, 755
StyD4I CCNGG 4 cut(s) 136, 451, 652, 653
StyI CCWWGG 1 cut(s) 383
TaaI ACNGT 3 cut(s) 116, 253, 512
TaqI TCGA 1 cut(s) 583
TasI AATT 7 cut(s) 321, 354, 378, 456, 465, 484, 867
TauI GCSGC 3 cut(s) 95, 197, 419
TfiI GAWTC 2 cut(s) 686, 770
Tru1I TTAA 2 cut(s) 324, 870
Tru9I TTAA 2 cut(s) 324, 870
TscAI CASTG 2 cut(s) 256, 397
TseFI GTSAC 1 cut(s) 657
TseI GCWGC 2 cut(s) 45, 827
Tsp45I GTSAC 1 cut(s) 657
TspDTI ATGAA 4 cut(s) 279, 560, 564, 929
TspGWI ACGGA 1 cut(s) 731
TspMI CCCGGG 1 cut(s) 653
TspRI CASTG 2 cut(s) 256, 397
Van91I CCANNNNNTGG 2 cut(s) 207, 839
VpaK11BI GGWCC 3 cut(s) 212, 449, 590
VspI ATTAAT 1 cut(s) 870
XapI RAATTY 3 cut(s) 378, 456, 465
XbaI TCTAGA 1 cut(s) 754
XmaI CCCGGG 1 cut(s) 653
XmiI GTMKAC 1 cut(s) 844
XspI CTAG 3 cut(s) 609, 683, 755
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.