Rh3AG259600
NAC Family

inactive purple acid phosphatase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3A
OG0007682
Physical Location & Seq
Reverse (-)
28828466 .. 28832575
4110 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3AG259600.1

Sequence Viewer

Length: 1155 bp
ATGATGATGATGATGATGATGGGAAGAAGGGTGAGGGTGTTGTGCTGCTTCACCACCTTTACATATTTGTATATCTACTCACTTGTCGTGGCTTTGCCAACCATACCGGACGGTGATCACCATCTGCTACTGCCCGGTGCTGGCCAGTCATTCAAGATCGCTCTCTTTGCCGACCTGCATTTCGGAGAGGCCGCCTCCACCGACTGGGGTCCACTCCAAGATGTCAACTCCCTCAGAGTCATGTCCACTGTGCTTGATCATGAAATCCCAGATTTTGTTATCTATCTTGGAGATGTCATCACAGCCAACAATATAGCAATTAAAAATGCAAGCTTGTATTGGGATCAAGCAATTTCTCCAACAAGAGCCAGAGGAATTCCTTGGGCCAGTGTTTTTGGAAACCATGATGATGCGGCATTTGAGTGGCCGATGGAGTGGTTTTCAGGTCCCGGAATTCCTGAAATTCGTTGCCCTGTAGCCAATTCCTCATGCTCAGGAGAAGAAGACTGTAGCTTCAAAGGCACACATCGTCTGGAGTTAATGAAAAATGAGATTGCACTTAGCTCTCTTTCATATTCTCGATATGGTCCTAAAGAACTTTGGCCTAGTGTATCTAACTATGTCCTGCAAGTTTCTTCGTCAAACAATCCCGGGTCACCTGTGGCATTTTTATATTTCCTAGATTCTGGTGGTGGTTCCTACCCAGAAGTTTTATCAAGTGGCCAAGCAGAATGGTTCCGTCGGAAAGCTCTAGAGATCAACCCTGATTCAAGGGTGCCTGAGCTAATCTTTTGGCATATACCAAGTCGTGCTTACAAGAAAGCGGCTCCAAGATTTGGTATACACAAGCCTTGTGTCGGTTCAATTAATAAGGAGAGAGTAGCAACTCAAGACGCTGAAAATGGCATCATGAAACTTTTGGCTGAAAGGGTTTCTGTCAAGGCAATATTTGTAGGACACAACCATGGATTGGACTGGTGCTGCCCTTATAAGAAACTGTGGCTATGCTTTGCTCGGCATACTGGTTATGGTGGCTATGGAAACTGGGCTAGAGGAGCTAGAATCATAGAAATCACCCAGCAGCCTTTCTCTATTAAATCTTGGATTAGAATGGAAGATGGTAGTGTACATAGTGAACTTGTCTTGAGTCCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0003993 GO:0005575 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0042578 GO:0044237
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Metallophos

Protein Analysis

384

Amino Acids

42.94

Weight (kDa)

6.63

Isoelectric Point (pI)

35.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Metallophos PF00149 51 - 322 2.3e-10 Calcineurin-like phosphoesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 990
Acc36I ACCTGC 1 cut(s) 183
AccB1I GGYRCC 1 cut(s) 775
AccB7I CCANNNNNTGG 3 cut(s) 204, 836, 970
AccI GTMKAC 1 cut(s) 841
AciI CCGC 3 cut(s) 192, 413, 824
AclWI GGATC 1 cut(s) 351
AcoI YGGCCR 3 cut(s) 142, 425, 721
AcsI RAATTY 3 cut(s) 375, 453, 462
AfaI GTAC 1 cut(s) 1128
AfiI CCNNNNNNNGG 5 cut(s) 140, 204, 836, 857, 970
AgsI TTSAA 4 cut(s) 154, 517, 771, 864
AluBI AGCT 6 cut(s) 333, 513, 564, 749, 784, 1058
AluI AGCT 6 cut(s) 333, 513, 564, 749, 784, 1058
AlwI GGATC 1 cut(s) 351
Ama87I CYCGRG 1 cut(s) 650
AoxI GGCC 6 cut(s) 142, 189, 384, 425, 602, 721
ApeKI GCWGC 3 cut(s) 45, 981, 1081
ApoI RAATTY 3 cut(s) 375, 453, 462
ArsI GACNNNNNNTTYG 2 cut(s) 164, 196
AseI ATTAAT 1 cut(s) 867
AspS9I GGNCC 4 cut(s) 209, 384, 446, 587
AsuC2I CCSGG 4 cut(s) 135, 450, 651, 652
AsuHPI GGTGA 6 cut(s) 43, 43, 110, 125, 648, 1066
AvaI CYCGRG 1 cut(s) 650
AvaII GGWCC 3 cut(s) 209, 446, 587
BalI TGGCCA 2 cut(s) 144, 723
BanI GGYRCC 1 cut(s) 775
BbsI GAAGAC 1 cut(s) 510
BbvI GCAGC 3 cut(s) 32, 968, 1093
BccI CCATC 4 cut(s) 13, 129, 424, 1112
BclI TGATCA 2 cut(s) 115, 256
BcnI CCSGG 4 cut(s) 135, 450, 651, 652
BfaI CTAG 5 cut(s) 606, 680, 752, 1050, 1059
BfmI CTRYAG 2 cut(s) 474, 508
BfuAI ACCTGC 1 cut(s) 183
BisI GCNGC 6 cut(s) 46, 192, 414, 825, 982, 1082
BlsI GCNGC 6 cut(s) 47, 193, 415, 826, 983, 1083
Bme1390I CCNGG 4 cut(s) 135, 450, 651, 652
Bme18I GGWCC 3 cut(s) 209, 446, 587
BmeT110I CYCGRG 1 cut(s) 650
BmgT120I GGNCC 4 cut(s) 209, 384, 446, 587
BmiI GGNNCC 6 cut(s) 210, 448, 697, 737, 777, 828
BmrFI CCNGG 4 cut(s) 135, 450, 651, 652
BmrI ACTGGG 2 cut(s) 214, 1054
BmsI GCATC 2 cut(s) 400, 915
BmuI ACTGGG 2 cut(s) 214, 1054
BoxI GACNNNNGTC 1 cut(s) 207
BpiI GAAGAC 1 cut(s) 510
BplI GAGNNNNNCTC 2 cut(s) 179, 211
BpmI CTGGAG 1 cut(s) 554
Bpu10I CCTNAGC 2 cut(s) 493, 780
BpuEI CTTGAG 1 cut(s) 873
BpuMI CCSGG 4 cut(s) 135, 450, 651, 652
BsaBI GATNNNNATC 1 cut(s) 120
BsaJI CCNNGG 3 cut(s) 380, 650, 964
BsaWI WCCGGW 1 cut(s) 106
Bsc4I CCNNNNNNNGG 5 cut(s) 140, 204, 836, 857, 970
Bse1I ACTGG 6 cut(s) 145, 209, 387, 980, 1027, 1049
Bse8I GATNNNNATC 1 cut(s) 120
BseDI CCNNGG 3 cut(s) 380, 650, 964
BseJI GATNNNNATC 1 cut(s) 120
BseLI CCNNNNNNNGG 5 cut(s) 140, 204, 836, 857, 970
BseMII CTCAG 3 cut(s) 247, 507, 771
BseNI ACTGG 6 cut(s) 145, 209, 387, 980, 1027, 1049
BseRI GAGGAG 1 cut(s) 1068
BseXI GCAGC 3 cut(s) 32, 968, 1093
BseYI CCCAGC 1 cut(s) 1077
BshFI GGCC 6 cut(s) 144, 191, 386, 427, 604, 723
BshNI GGYRCC 1 cut(s) 775
BsiHKCI CYCGRG 1 cut(s) 650
BsiSI CCGG 4 cut(s) 107, 135, 450, 651
BslFI GGGAC 2 cut(s) 432, 1134
BslI CCNNNNNNNGG 5 cut(s) 140, 204, 836, 857, 970
BsmFI GGGAC 2 cut(s) 432, 1134
BsnI GGCC 6 cut(s) 144, 191, 386, 427, 604, 723
BsoBI CYCGRG 1 cut(s) 650
Bsp1407I TGTACA 1 cut(s) 1126
Bsp143I GATC 5 cut(s) 115, 156, 256, 343, 756
Bsp19I CCATGG 1 cut(s) 964
BspACI CCGC 3 cut(s) 192, 413, 824
BspANI GGCC 6 cut(s) 144, 191, 386, 427, 604, 723
BspCNI CTCAG 3 cut(s) 246, 506, 772
BspHI TCATGA 2 cut(s) 259, 909
BspLI GGNNCC 6 cut(s) 210, 448, 697, 737, 777, 828
BspMI ACCTGC 1 cut(s) 183
BspPI GGATC 1 cut(s) 351
BspT107I GGYRCC 1 cut(s) 775
BsrGI TGTACA 1 cut(s) 1126
BsrI ACTGG 6 cut(s) 145, 209, 387, 980, 1027, 1049
BssECI CCNNGG 3 cut(s) 380, 650, 964
BssMI GATC 5 cut(s) 115, 156, 256, 343, 756
BssNAI GTATAC 1 cut(s) 842
BssT1I CCWWGG 2 cut(s) 380, 964
Bst1107I GTATAC 1 cut(s) 842
Bst4CI ACNGT 4 cut(s) 113, 250, 509, 999
BstAUI TGTACA 1 cut(s) 1126
BstC8I GCNNGC 2 cut(s) 142, 331
BstDEI CTNAG 4 cut(s) 233, 493, 560, 780
BstDSI CCRYGG 1 cut(s) 964
BstEII GGTNACC 1 cut(s) 654
BstKTI GATC 5 cut(s) 118, 159, 259, 346, 759
BstMBI GATC 5 cut(s) 115, 156, 256, 343, 756
BstMWI GCNNNNNNNGC 3 cut(s) 167, 519, 1055
BstPAI GACNNNNGTC 1 cut(s) 207
BstPI GGTNACC 1 cut(s) 654
BstSCI CCNGG 4 cut(s) 133, 448, 649, 650
BstSFI CTRYAG 2 cut(s) 474, 508
BstV1I GCAGC 3 cut(s) 32, 968, 1093
BstV2I GAAGAC 1 cut(s) 510
BstZ17I GTATAC 1 cut(s) 842
BsuRI GGCC 6 cut(s) 144, 191, 386, 427, 604, 723
BtgI CCRYGG 1 cut(s) 964
BtsIMutI CAGTG 2 cut(s) 246, 394
BveI ACCTGC 1 cut(s) 183
Cac8I GCNNGC 2 cut(s) 142, 331
CciI TCATGA 2 cut(s) 259, 909
Cfr13I GGNCC 4 cut(s) 209, 384, 446, 587
Cfr9I CCCGGG 1 cut(s) 650
CseI GACGC 1 cut(s) 902
Csp6I GTAC 1 cut(s) 1127
CspCI CAANNNNNGTGG 2 cut(s) 235, 270
CviAII CATG 6 cut(s) 241, 260, 404, 489, 910, 965
CviQI GTAC 1 cut(s) 1127
DdeI CTNAG 4 cut(s) 233, 493, 560, 780
DpnI GATC 5 cut(s) 117, 158, 258, 345, 758
DpnII GATC 5 cut(s) 115, 156, 256, 343, 756
EaeI YGGCCR 3 cut(s) 142, 425, 721
Eco130I CCWWGG 2 cut(s) 380, 964
Eco47I GGWCC 3 cut(s) 209, 446, 587
Eco88I CYCGRG 1 cut(s) 650
Eco91I GGTNACC 1 cut(s) 654
EcoO109I RGGNCCY 1 cut(s) 446
EcoO65I GGTNACC 1 cut(s) 654
EcoRI GAATTC 2 cut(s) 375, 453
EcoT14I CCWWGG 2 cut(s) 380, 964
ErhI CCWWGG 2 cut(s) 380, 964
FaeI CATG 6 cut(s) 244, 263, 407, 492, 913, 968
FalI AAGNNNNNCTT 2 cut(s) 796, 828
FaqI GGGAC 2 cut(s) 432, 1134
FatI CATG 6 cut(s) 240, 259, 403, 488, 909, 964
FbaI TGATCA 2 cut(s) 115, 256
FblI GTMKAC 1 cut(s) 841
Fnu4HI GCNGC 6 cut(s) 46, 192, 414, 825, 982, 1082
Fsp4HI GCNGC 6 cut(s) 46, 192, 414, 825, 982, 1082
FspBI CTAG 5 cut(s) 606, 680, 752, 1050, 1059
GluI GCNGC 6 cut(s) 46, 192, 414, 825, 982, 1082
GsaI CCCAGC 1 cut(s) 1081
GsuI CTGGAG 1 cut(s) 554
HaeIII GGCC 6 cut(s) 144, 191, 386, 427, 604, 723
HapII CCGG 4 cut(s) 107, 135, 450, 651
HgaI GACGC 1 cut(s) 902
Hin1II CATG 6 cut(s) 244, 263, 407, 492, 913, 968
HincII GTYRAC 1 cut(s) 226
HindII GTYRAC 1 cut(s) 226
HindIII AAGCTT 1 cut(s) 331
HinfI GANTC 5 cut(s) 237, 683, 767, 1062, 1147
HpaII CCGG 4 cut(s) 107, 135, 450, 651
HphI GGTGA 6 cut(s) 43, 43, 110, 125, 648, 1066
Hpy166II GTNNAC 6 cut(s) 212, 226, 246, 842, 1127, 1136
Hpy188I TCNGA 3 cut(s) 185, 236, 744
Hpy8I GTNNAC 6 cut(s) 212, 226, 246, 842, 1127, 1136
Hpy99I CGWCG 1 cut(s) 744
HpyAV CCTTC 1 cut(s) 21
HpyCH4III ACNGT 4 cut(s) 113, 250, 509, 999
HpyCH4V TGCA 4 cut(s) 178, 329, 557, 628
HpyF10VI GCNNNNNNNGC 3 cut(s) 167, 519, 1055
HpyF3I CTNAG 4 cut(s) 233, 493, 560, 780
Hsp92II CATG 6 cut(s) 244, 263, 407, 492, 913, 968
Ksp22I TGATCA 2 cut(s) 115, 256
Kzo9I GATC 5 cut(s) 115, 156, 256, 343, 756
LmnI GCTCC 2 cut(s) 832, 1055
Lsp1109I GCAGC 3 cut(s) 32, 968, 1093
LweI GCATC 2 cut(s) 400, 915
MaeI CTAG 5 cut(s) 606, 680, 752, 1050, 1059
MaeIII GTNAC 1 cut(s) 654
MalI GATC 5 cut(s) 117, 158, 258, 345, 758
MboI GATC 5 cut(s) 115, 156, 256, 343, 756
MboII GAAGA 5 cut(s) 36, 512, 515, 627, 1127
MlsI TGGCCA 2 cut(s) 144, 723
MluCI AATT 7 cut(s) 318, 351, 375, 453, 462, 481, 864
MluNI TGGCCA 2 cut(s) 144, 723
MlyI GAGTC 1 cut(s) 246
MmeI TCCRAC 2 cut(s) 383, 722
MnlI CCTC 7 cut(s) 27, 181, 205, 242, 365, 496, 1046
Mox20I TGGCCA 2 cut(s) 144, 723
MscI TGGCCA 2 cut(s) 144, 723
MseI TTAA 4 cut(s) 321, 539, 867, 1095
MslI CAYNNNNRTG 3 cut(s) 408, 421, 963
Msp20I TGGCCA 2 cut(s) 144, 723
MspI CCGG 4 cut(s) 107, 135, 450, 651
MspR9I CCNGG 4 cut(s) 135, 450, 651, 652
MwoI GCNNNNNNNGC 3 cut(s) 167, 519, 1055
NciI CCSGG 4 cut(s) 135, 450, 651, 652
NcoI CCATGG 1 cut(s) 964
NdeII GATC 5 cut(s) 115, 156, 256, 343, 756
NlaIII CATG 6 cut(s) 244, 263, 407, 492, 913, 968
NlaIV GGNNCC 6 cut(s) 210, 448, 697, 737, 777, 828
NmeAIII GCCGAG 1 cut(s) 994
NmuCI GTSAC 1 cut(s) 654
PagI TCATGA 2 cut(s) 259, 909
PfeI GAWTC 3 cut(s) 683, 767, 1062
PflMI CCANNNNNTGG 3 cut(s) 204, 836, 970
PfoI TCCNGGA 1 cut(s) 448
PkrI GCNGC 6 cut(s) 47, 193, 415, 826, 983, 1083
PleI GAGTC 1 cut(s) 245
PpsI GAGTC 1 cut(s) 245
PpuMI RGGWCCY 1 cut(s) 446
PshAI GACNNNNGTC 1 cut(s) 207
PshBI ATTAAT 1 cut(s) 867
PsiI TTATAA 1 cut(s) 990
Psp5II RGGWCCY 1 cut(s) 446
PspEI GGTNACC 1 cut(s) 654
PspFI CCCAGC 1 cut(s) 1077
PspN4I GGNNCC 6 cut(s) 210, 448, 697, 737, 777, 828
PspPI GGNCC 4 cut(s) 209, 384, 446, 587
PspPPI RGGWCCY 1 cut(s) 446
RsaI GTAC 1 cut(s) 1128
RsaNI GTAC 1 cut(s) 1127
RseI CAYNNNNRTG 3 cut(s) 408, 421, 963
SaqAI TTAA 4 cut(s) 321, 539, 867, 1095
SatI GCNGC 6 cut(s) 46, 192, 414, 825, 982, 1082
Sau3AI GATC 5 cut(s) 115, 156, 256, 343, 756
Sau96I GGNCC 4 cut(s) 209, 384, 446, 587
SchI GAGTC 1 cut(s) 246
ScrFI CCNGG 4 cut(s) 135, 450, 651, 652
SfaNI GCATC 2 cut(s) 400, 915
SfcI CTRYAG 2 cut(s) 474, 508
SinI GGWCC 3 cut(s) 209, 446, 587
SmaI CCCGGG 1 cut(s) 652
SmiMI CAYNNNNRTG 3 cut(s) 408, 421, 963
SmlI CTYRAG 2 cut(s) 888, 1144
SmoI CTYRAG 2 cut(s) 888, 1144
Sse9I AATT 7 cut(s) 318, 351, 375, 453, 462, 481, 864
SsiI CCGC 3 cut(s) 192, 413, 824
SspI AATATT 1 cut(s) 948
SspMI CTAG 5 cut(s) 606, 680, 752, 1050, 1059
StyD4I CCNGG 4 cut(s) 133, 448, 649, 650
StyI CCWWGG 2 cut(s) 380, 964
TaaI ACNGT 4 cut(s) 113, 250, 509, 999
TaqI TCGA 1 cut(s) 580
TasI AATT 7 cut(s) 318, 351, 375, 453, 462, 481, 864
TatI WGTACW 1 cut(s) 1126
TauI GCSGC 3 cut(s) 194, 416, 827
TfiI GAWTC 3 cut(s) 683, 767, 1062
Tru1I TTAA 4 cut(s) 321, 539, 867, 1095
Tru9I TTAA 4 cut(s) 321, 539, 867, 1095
TscAI CASTG 2 cut(s) 253, 394
TseFI GTSAC 1 cut(s) 654
TseI GCWGC 3 cut(s) 45, 981, 1081
Tsp45I GTSAC 1 cut(s) 654
TspDTI ATGAA 4 cut(s) 276, 557, 561, 926
TspGWI ACGGA 1 cut(s) 728
TspMI CCCGGG 1 cut(s) 650
TspRI CASTG 2 cut(s) 253, 394
Van91I CCANNNNNTGG 3 cut(s) 204, 836, 970
VpaK11BI GGWCC 3 cut(s) 209, 446, 587
VspI ATTAAT 1 cut(s) 867
XapI RAATTY 3 cut(s) 375, 453, 462
XbaI TCTAGA 1 cut(s) 751
XmaI CCCGGG 1 cut(s) 650
XmiI GTMKAC 1 cut(s) 841
XspI CTAG 5 cut(s) 606, 680, 752, 1050, 1059
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.