NHL domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0330481 RchiOBHm_Chr1g0343121 RchiOBHm_Chr5g0006981 RchiOBHm_Chr7g0228441 |
| rosa_laevigata | RLG00000009218 RLG00000013428 RLG00000023422 RLG00000028878 |
| rosa_multiflora | Rmu_co8340297.1_g000001 Rmu_sc0027157.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00071520 Rroxscaffold_7G00192850 |
| rosa_rugosa | Rorug05G0375200 |
| rosa_samantha | Rh2CG409900 Rh2DG353000 Rh3BG332600 Rh3DG311700 Rh4DG241500 Rh5AG153900 Rh5AG364100 Rh6AG240500 Rh6BG135500 Rh7CG472600 Rh7DG441600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 4 cut(s) | 64, 118, 119, 132 |
| AcsI | RAATTY | 3 cut(s) | 97, 218, 518 |
| AcuI | CTGAAG | 1 cut(s) | 456 |
| AcyI | GRCGYC | 1 cut(s) | 10 |
| AflIII | ACRYGT | 1 cut(s) | 321 |
| AgsI | TTSAA | 4 cut(s) | 97, 349, 517, 539 |
| AjnI | CCWGG | 1 cut(s) | 127 |
| AluBI | AGCT | 3 cut(s) | 33, 63, 487 |
| AluI | AGCT | 3 cut(s) | 33, 63, 487 |
| Alw21I | GWGCWC | 1 cut(s) | 136 |
| Alw26I | GTCTC | 1 cut(s) | 19 |
| AlwI | GGATC | 4 cut(s) | 64, 118, 119, 132 |
| Ama87I | CYCGRG | 1 cut(s) | 135 |
| ApoI | RAATTY | 3 cut(s) | 97, 218, 518 |
| AseI | ATTAAT | 1 cut(s) | 425 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 534 |
| AspS9I | GGNCC | 1 cut(s) | 295 |
| AsuHPI | GGTGA | 1 cut(s) | 257 |
| AvaI | CYCGRG | 1 cut(s) | 135 |
| AvaII | GGWCC | 1 cut(s) | 295 |
| BaeGI | GKGCMC | 1 cut(s) | 198 |
| BamHI | GGATCC | 1 cut(s) | 124 |
| Bbv12I | GWGCWC | 1 cut(s) | 136 |
| BccI | CCATC | 2 cut(s) | 34, 388 |
| BcgI | CGANNNNNNTGC | 1 cut(s) | 27 |
| BciT130I | CCWGG | 1 cut(s) | 129 |
| BcoDI | GTCTC | 1 cut(s) | 19 |
| Bme1390I | CCNGG | 1 cut(s) | 129 |
| Bme18I | GGWCC | 1 cut(s) | 295 |
| BmeT110I | CYCGRG | 1 cut(s) | 135 |
| BmgT120I | GGNCC | 1 cut(s) | 295 |
| BmiI | GGNNCC | 3 cut(s) | 82, 126, 175 |
| BmrFI | CCNGG | 1 cut(s) | 129 |
| BmsI | GCATC | 1 cut(s) | 515 |
| BpuEI | CTTGAG | 2 cut(s) | 55, 85 |
| BsaBI | GATNNNNATC | 1 cut(s) | 379 |
| BsaHI | GRCGYC | 1 cut(s) | 10 |
| Bse8I | GATNNNNATC | 1 cut(s) | 379 |
| BseBI | CCWGG | 1 cut(s) | 129 |
| BseGI | GGATG | 2 cut(s) | 45, 358 |
| BseJI | GATNNNNATC | 1 cut(s) | 379 |
| BseRI | GAGGAG | 2 cut(s) | 31, 204 |
| BseSI | GKGCMC | 1 cut(s) | 198 |
| BsiHKAI | GWGCWC | 1 cut(s) | 136 |
| BsiHKCI | CYCGRG | 1 cut(s) | 135 |
| BslFI | GGGAC | 2 cut(s) | 87, 344 |
| BsmAI | GTCTC | 1 cut(s) | 19 |
| BsmBI | CGTCTC | 1 cut(s) | 19 |
| BsmFI | GGGAC | 2 cut(s) | 87, 344 |
| BsmI | GAATGC | 2 cut(s) | 534, 579 |
| BsoBI | CYCGRG | 1 cut(s) | 135 |
| Bsp1286I | GDGCHC | 2 cut(s) | 136, 198 |
| Bsp143I | GATC | 3 cut(s) | 56, 110, 124 |
| BspLI | GGNNCC | 3 cut(s) | 82, 126, 175 |
| BspPI | GGATC | 4 cut(s) | 64, 118, 119, 132 |
| BssMI | GATC | 3 cut(s) | 56, 110, 124 |
| BssNI | GRCGYC | 1 cut(s) | 10 |
| Bst2UI | CCWGG | 1 cut(s) | 129 |
| BstACI | GRCGYC | 1 cut(s) | 10 |
| BstC8I | GCNNGC | 1 cut(s) | 559 |
| BstDEI | CTNAG | 1 cut(s) | 152 |
| BstF5I | GGATG | 2 cut(s) | 45, 358 |
| BstKTI | GATC | 3 cut(s) | 59, 113, 127 |
| BstMAI | GTCTC | 1 cut(s) | 19 |
| BstMBI | GATC | 3 cut(s) | 56, 110, 124 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 376, 451 |
| BstNI | CCWGG | 1 cut(s) | 129 |
| BstNSI | RCATGY | 2 cut(s) | 318, 325 |
| BstSCI | CCNGG | 1 cut(s) | 127 |
| BstSLI | GKGCMC | 1 cut(s) | 198 |
| BstX2I | RGATCY | 2 cut(s) | 110, 124 |
| BstYI | RGATCY | 2 cut(s) | 110, 124 |
| BtsCI | GGATG | 2 cut(s) | 45, 358 |
| Cac8I | GCNNGC | 1 cut(s) | 559 |
| Cfr13I | GGNCC | 1 cut(s) | 295 |
| CviAII | CATG | 5 cut(s) | 77, 167, 315, 322, 594 |
| CviJI | RGCY | 9 cut(s) | 33, 63, 83, 140, 370, 400, 465, 487, 557 |
| CviKI_1 | RGCY | 9 cut(s) | 33, 63, 83, 140, 370, 400, 465, 487, 557 |
| DdeI | CTNAG | 1 cut(s) | 152 |
| DpnI | GATC | 3 cut(s) | 58, 112, 126 |
| DpnII | GATC | 3 cut(s) | 56, 110, 124 |
| DraI | TTTAAA | 1 cut(s) | 600 |
| Eco47I | GGWCC | 1 cut(s) | 295 |
| Eco57I | CTGAAG | 1 cut(s) | 456 |
| Eco88I | CYCGRG | 1 cut(s) | 135 |
| EcoRII | CCWGG | 1 cut(s) | 127 |
| EcoT22I | ATGCAT | 1 cut(s) | 508 |
| Esp3I | CGTCTC | 1 cut(s) | 19 |
| FaeI | CATG | 5 cut(s) | 80, 170, 318, 325, 597 |
| FaqI | GGGAC | 2 cut(s) | 87, 344 |
| FatI | CATG | 5 cut(s) | 76, 166, 314, 321, 593 |
| FokI | GGATG | 2 cut(s) | 52, 365 |
| Hin1I | GRCGYC | 1 cut(s) | 10 |
| Hin1II | CATG | 5 cut(s) | 80, 170, 318, 325, 597 |
| HincII | GTYRAC | 1 cut(s) | 496 |
| HindII | GTYRAC | 1 cut(s) | 496 |
| HindIII | AAGCTT | 1 cut(s) | 485 |
| HinfI | GANTC | 1 cut(s) | 248 |
| HphI | GGTGA | 1 cut(s) | 257 |
| Hpy166II | GTNNAC | 1 cut(s) | 496 |
| Hpy188I | TCNGA | 2 cut(s) | 15, 405 |
| Hpy188III | TCNNGA | 3 cut(s) | 177, 206, 547 |
| Hpy8I | GTNNAC | 1 cut(s) | 496 |
| Hpy99I | CGWCG | 1 cut(s) | 15 |
| HpyAV | CCTTC | 5 cut(s) | 64, 164, 176, 343, 455 |
| HpyCH4V | TGCA | 3 cut(s) | 4, 283, 506 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 376, 451 |
| HpyF3I | CTNAG | 1 cut(s) | 152 |
| Hsp92I | GRCGYC | 1 cut(s) | 10 |
| Hsp92II | CATG | 5 cut(s) | 80, 170, 318, 325, 597 |
| Kzo9I | GATC | 3 cut(s) | 56, 110, 124 |
| LmnI | GCTCC | 2 cut(s) | 30, 80 |
| LpnPI | CCDG | 6 cut(s) | 114, 141, 190, 269, 431, 571 |
| LweI | GCATC | 1 cut(s) | 515 |
| MaeIII | GTNAC | 2 cut(s) | 270, 317 |
| MalI | GATC | 3 cut(s) | 58, 112, 126 |
| MboI | GATC | 3 cut(s) | 56, 110, 124 |
| MboII | GAAGA | 4 cut(s) | 105, 316, 449, 470 |
| MfeI | CAATTG | 1 cut(s) | 278 |
| MflI | RGATCY | 2 cut(s) | 110, 124 |
| MhlI | GDGCHC | 2 cut(s) | 136, 198 |
| MluCI | AATT | 6 cut(s) | 97, 218, 278, 290, 426, 518 |
| MmeI | TCCRAC | 2 cut(s) | 34, 455 |
| MnlI | CCTC | 5 cut(s) | 9, 30, 60, 182, 411 |
| Mph1103I | ATGCAT | 1 cut(s) | 508 |
| MroXI | GAANNNNTTC | 1 cut(s) | 534 |
| MseI | TTAA | 3 cut(s) | 425, 599, 607 |
| MspR9I | CCNGG | 1 cut(s) | 129 |
| MssI | GTTTAAAC | 1 cut(s) | 600 |
| MunI | CAATTG | 1 cut(s) | 278 |
| Mva1269I | GAATGC | 2 cut(s) | 534, 579 |
| MvaI | CCWGG | 1 cut(s) | 129 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 376, 451 |
| NdeII | GATC | 3 cut(s) | 56, 110, 124 |
| NlaIII | CATG | 5 cut(s) | 80, 170, 318, 325, 597 |
| NlaIV | GGNNCC | 3 cut(s) | 82, 126, 175 |
| NsiI | ATGCAT | 1 cut(s) | 508 |
| NspI | RCATGY | 2 cut(s) | 318, 325 |
| PciI | ACATGT | 1 cut(s) | 321 |
| PctI | GAATGC | 2 cut(s) | 534, 579 |
| PdmI | GAANNNNTTC | 1 cut(s) | 534 |
| PfeI | GAWTC | 1 cut(s) | 248 |
| PmeI | GTTTAAAC | 1 cut(s) | 600 |
| PscI | ACATGT | 1 cut(s) | 321 |
| PshBI | ATTAAT | 1 cut(s) | 425 |
| Psp6I | CCWGG | 1 cut(s) | 127 |
| PspGI | CCWGG | 1 cut(s) | 127 |
| PspN4I | GGNNCC | 3 cut(s) | 82, 126, 175 |
| PspPI | GGNCC | 1 cut(s) | 295 |
| PsuI | RGATCY | 2 cut(s) | 110, 124 |
| SaqAI | TTAA | 3 cut(s) | 425, 599, 607 |
| Sau3AI | GATC | 3 cut(s) | 56, 110, 124 |
| Sau96I | GGNCC | 1 cut(s) | 295 |
| ScrFI | CCNGG | 1 cut(s) | 129 |
| SduI | GDGCHC | 2 cut(s) | 136, 198 |
| SetI | ASST | 7 cut(s) | 35, 65, 175, 187, 334, 489, 606 |
| SfaNI | GCATC | 1 cut(s) | 515 |
| SinI | GGWCC | 1 cut(s) | 295 |
| SmlI | CTYRAG | 2 cut(s) | 34, 64 |
| SmoI | CTYRAG | 2 cut(s) | 34, 64 |
| Sse9I | AATT | 6 cut(s) | 97, 218, 278, 290, 426, 518 |
| StyD4I | CCNGG | 1 cut(s) | 127 |
| TaqI | TCGA | 1 cut(s) | 59 |
| TasI | AATT | 6 cut(s) | 97, 218, 278, 290, 426, 518 |
| TfiI | GAWTC | 1 cut(s) | 248 |
| Tru1I | TTAA | 3 cut(s) | 425, 599, 607 |
| Tru9I | TTAA | 3 cut(s) | 425, 599, 607 |
| TspDTI | ATGAA | 4 cut(s) | 183, 217, 369, 582 |
| TspGWI | ACGGA | 1 cut(s) | 43 |
| VpaK11BI | GGWCC | 1 cut(s) | 295 |
| VspI | ATTAAT | 1 cut(s) | 425 |
| XapI | RAATTY | 3 cut(s) | 97, 218, 518 |
| XceI | RCATGY | 2 cut(s) | 318, 325 |
| XmnI | GAANNNNTTC | 1 cut(s) | 534 |
| Zsp2I | ATGCAT | 1 cut(s) | 508 |