RLG00000023892

Mitochondrial fission protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
OG0003516
Physical Location & Seq
Reverse (-)
29621587 .. 29624826
3240 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000023892

Sequence Viewer

Length: 1170 bp
ATGGTACAAGGTGGGACCCAGGGAGCTATCAGACGGGCCATTGTGATCGGAAATGGGTTTGCCGGAGCAGAGAATCAGAGCATTGGTTTGGTTCGTGCTCTGGGTTTATCTGATCGTCATTCTATTTATCGAGTGACTAGACCAAGAGGAGGAATTAACAAATGGCTTCCATGGCTTCCACTTTCTCTACATAAAAAAGTAGACTATGTCATCTCAGGGATGCCCTTTTCTGCGGAAAAGATAGGCCTCTCATCTGGTGTTGTGGAAGCTGATGCAAAGCAGATTGCAAATATGGCTCGTAACACATTTGACAAAGACGGCCCGTTGCTGGTAGTTGCATCTGGTCGGGATACCATTCCTGTTGCAAGCGCCATAAAACGTTTAGCTCCAGAAAATGTTTTTCTTGTCCAGATACAACATCCAAGGTCACATCTGCATAGGTTTGATTTGGTGATAGCTCCTCGTCATGATTATTACCCGTTGACTCCTCATGCACAGAAACAAATTCCTTGGTTTCTCCGGAGGTGGATTACCCCTCGCGAACCACCTGGCAAAAATGTGGTTCTCACCATTGGAGCTCTTCATCAGGCTGATCCTGCTGCACTTAAGAGTGCTGCTTCTGCCTGGCACGCTGAGCTGGCACCTCTCCTGAAGCCCTTGCTTGTAGTCAATATAGGAGGCCCTTCTGGAAACTGTTCATATGGTGTGGATCTTGCGAAACAGTTGGCAGCTATGCTGCAGAATGTTCTGTGGAGCTGTGGAAGTGTGAGAATTTCTTTCTCCAGAAGAACTCCTGAGAAGGTGTCCAGACTTCTTATAAGAGAATTCAGTAATAATCCGAAAGTCTACATTTGGGATGGCAAAGGCCACAATCCACATATGGGCCATCTAGCCTTGGCAGATGCTTTTATCATCACTGCTGATTCAGTCAGCATGTTGAGTGAGGCTTGCAGTACTGGCAAACCTGTGTATGTGATTGGTGCCGAACACTGTACGTGGAAGTTCAGAGACTTCCAGAACCGTCTGGAGGAACGAGGAGTAGTTCAACCATTCACTGGTAAAGAGGATATGTCCAAGTGTTGGAGCTATGTTCCACTTAATGACACTGCCGAGGCTGCTAGTCAGGTGATCAAGGCCCTTGCTGAGCGGGGATGGAGTATACTTATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Mito_fiss_Elm1

Protein Analysis

390

Amino Acids

42.77

Weight (kDa)

9.66

Isoelectric Point (pI)

37.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mito_fiss_Elm1 PF06258 21 - 380 6.5e-111 Mitochondrial fission ELM1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 818
AccB1I GGYRCC 2 cut(s) 640, 980
AccB7I CCANNNNNTGG 2 cut(s) 1055, 1080
AccBSI CCGCTC 1 cut(s) 1147
AccI GTMKAC 3 cut(s) 201, 846, 1159
AccII CGCG 1 cut(s) 540
AccIII TCCGGA 1 cut(s) 519
AciI CCGC 2 cut(s) 233, 1147
AclI AACGTT 1 cut(s) 379
AclWI GGATC 2 cut(s) 587, 717
AcsI RAATTY 3 cut(s) 504, 771, 824
AcuI CTGAAG 1 cut(s) 671
AfaI GTAC 3 cut(s) 6, 955, 994
AfiI CCNNNNNNNGG 6 cut(s) 149, 328, 881, 1027, 1055, 1080
AflII CTTAAG 1 cut(s) 605
AgsI TTSAA 1 cut(s) 1046
AjnI CCWGG 3 cut(s) 18, 547, 623
AluBI AGCT 9 cut(s) 26, 269, 386, 458, 578, 637, 731, 756, 1086
AluI AGCT 9 cut(s) 26, 269, 386, 458, 578, 637, 731, 756, 1086
Alw21I GWGCWC 2 cut(s) 100, 580
Alw26I GTCTC 1 cut(s) 1002
AlwI GGATC 2 cut(s) 587, 717
Aor13HI TCCGGA 1 cut(s) 519
AoxI GGCC 7 cut(s) 36, 244, 319, 679, 865, 883, 1134
ApeKI GCWGC 5 cut(s) 599, 614, 728, 736, 1115
ApoI RAATTY 3 cut(s) 504, 771, 824
Asp700I GAANNNNTTC 1 cut(s) 694
AspLEI GCGC 1 cut(s) 371
AspS9I GGNCC 6 cut(s) 15, 36, 320, 680, 883, 1135
AsuHPI GGTGA 3 cut(s) 463, 559, 1138
AvaII GGWCC 1 cut(s) 15
BanI GGYRCC 2 cut(s) 640, 980
BanII GRGCYC 1 cut(s) 580
Bbv12I GWGCWC 2 cut(s) 100, 580
BbvI GCAGC 5 cut(s) 586, 601, 723, 740, 1102
BccI CCATC 3 cut(s) 851, 894, 1146
BceAI ACGGC 1 cut(s) 334
BciT130I CCWGG 3 cut(s) 20, 549, 625
BciVI GTATCC 1 cut(s) 343
BclI TGATCA 1 cut(s) 1128
BcoDI GTCTC 1 cut(s) 1002
BfaI CTAG 3 cut(s) 138, 890, 1119
BfmI CTRYAG 1 cut(s) 737
BfoI RGCGCY 1 cut(s) 372
BfrI CTTAAG 1 cut(s) 605
BfuI GTATCC 1 cut(s) 343
BisI GCNGC 5 cut(s) 600, 615, 729, 737, 1116
BlpI GCTNAGC 2 cut(s) 633, 1143
BlsI GCNGC 5 cut(s) 601, 616, 730, 738, 1117
BmcAI AGTACT 1 cut(s) 955
Bme1390I CCNGG 3 cut(s) 20, 549, 625
Bme18I GGWCC 1 cut(s) 15
BmgT120I GGNCC 6 cut(s) 15, 36, 320, 680, 883, 1135
BmiI GGNNCC 4 cut(s) 16, 17, 642, 982
BmrFI CCNGG 3 cut(s) 20, 549, 625
BmsI GCATC 4 cut(s) 210, 262, 347, 892
BpmI CTGGAG 3 cut(s) 372, 766, 1046
Bpu1102I GCTNAGC 2 cut(s) 633, 1143
BsaAI YACGTR 1 cut(s) 996
BsaJI CCNNGG 7 cut(s) 18, 19, 170, 422, 509, 894, 1110
BsaWI WCCGGW 1 cut(s) 519
Bsc4I CCNNNNNNNGG 6 cut(s) 149, 328, 881, 1027, 1055, 1080
Bse1I ACTGG 2 cut(s) 961, 1060
BseAI TCCGGA 1 cut(s) 519
BseBI CCWGG 3 cut(s) 20, 549, 625
BseDI CCNNGG 7 cut(s) 18, 19, 170, 422, 509, 894, 1110
BseGI GGATG 4 cut(s) 225, 418, 862, 1157
BseLI CCNNNNNNNGG 6 cut(s) 149, 328, 881, 1027, 1055, 1080
BseMII CTCAG 4 cut(s) 228, 624, 786, 1134
BseNI ACTGG 2 cut(s) 961, 1060
BseRI GAGGAG 4 cut(s) 162, 450, 477, 1050
BseXI GCAGC 5 cut(s) 586, 601, 723, 740, 1102
BsgI GTGCAG 1 cut(s) 585
Bsh1236I CGCG 1 cut(s) 540
BshFI GGCC 7 cut(s) 38, 246, 321, 681, 867, 885, 1136
BshNI GGYRCC 2 cut(s) 640, 980
BsiHKAI GWGCWC 2 cut(s) 100, 580
BsiSI CCGG 2 cut(s) 63, 520
BslFI GGGAC 1 cut(s) 28
BslI CCNNNNNNNGG 6 cut(s) 149, 328, 881, 1027, 1055, 1080
BsmAI GTCTC 1 cut(s) 1002
BsmFI GGGAC 1 cut(s) 28
BsnI GGCC 7 cut(s) 38, 246, 321, 681, 867, 885, 1136
Bsp1286I GDGCHC 2 cut(s) 100, 580
Bsp13I TCCGGA 1 cut(s) 519
Bsp143I GATC 5 cut(s) 45, 112, 592, 709, 1128
Bsp1720I GCTNAGC 2 cut(s) 633, 1143
Bsp19I CCATGG 1 cut(s) 170
Bsp68I TCGCGA 1 cut(s) 540
BspACI CCGC 2 cut(s) 233, 1147
BspANI GGCC 7 cut(s) 38, 246, 321, 681, 867, 885, 1136
BspCNI CTCAG 4 cut(s) 227, 625, 787, 1135
BspEI TCCGGA 1 cut(s) 519
BspFNI CGCG 1 cut(s) 540
BspHI TCATGA 1 cut(s) 466
BspLI GGNNCC 4 cut(s) 16, 17, 642, 982
BspMAI CTGCAG 1 cut(s) 741
BspPI GGATC 2 cut(s) 587, 717
BspQI GCTCTTC 1 cut(s) 585
BspT107I GGYRCC 2 cut(s) 640, 980
BspTI CTTAAG 1 cut(s) 605
BsrBI CCGCTC 1 cut(s) 1147
BsrI ACTGG 2 cut(s) 961, 1060
BssECI CCNNGG 7 cut(s) 18, 19, 170, 422, 509, 894, 1110
BssMI GATC 5 cut(s) 45, 112, 592, 709, 1128
BssNAI GTATAC 1 cut(s) 1160
BssT1I CCWWGG 4 cut(s) 170, 422, 509, 894
Bst1107I GTATAC 1 cut(s) 1160
Bst2UI CCWGG 3 cut(s) 20, 549, 625
Bst4CI ACNGT 4 cut(s) 695, 723, 992, 1022
Bst6I CTCTTC 1 cut(s) 585
BstAFI CTTAAG 1 cut(s) 605
BstBAI YACGTR 1 cut(s) 996
BstC8I GCNNGC 4 cut(s) 367, 630, 639, 949
BstDEI CTNAG 4 cut(s) 214, 633, 795, 1143
BstDSI CCRYGG 1 cut(s) 170
BstF5I GGATG 4 cut(s) 225, 418, 862, 1157
BstFNI CGCG 1 cut(s) 540
BstH2I RGCGCY 1 cut(s) 372
BstHHI GCGC 1 cut(s) 371
BstKTI GATC 5 cut(s) 48, 115, 595, 712, 1131
BstMAI GTCTC 1 cut(s) 1002
BstMBI GATC 5 cut(s) 45, 112, 592, 709, 1128
BstMWI GCNNNNNNNGC 9 cut(s) 172, 293, 596, 620, 629, 634, 638, 957, 1115
BstNI CCWGG 3 cut(s) 20, 549, 625
BstNSI RCATGY 1 cut(s) 937
BstSCI CCNGG 3 cut(s) 18, 547, 623
BstSFI CTRYAG 1 cut(s) 737
BstUI CGCG 1 cut(s) 540
BstV1I GCAGC 5 cut(s) 586, 601, 723, 740, 1102
BstX2I RGATCY 1 cut(s) 709
BstYI RGATCY 1 cut(s) 709
BstZ17I GTATAC 1 cut(s) 1160
BsuI GTATCC 1 cut(s) 343
BsuRI GGCC 7 cut(s) 38, 246, 321, 681, 867, 885, 1136
BtgI CCRYGG 1 cut(s) 170
BtsCI GGATG 4 cut(s) 225, 418, 862, 1157
BtsI GCAGTG 2 cut(s) 915, 1104
BtsIMutI CAGTG 4 cut(s) 915, 988, 1053, 1104
BtuMI TCGCGA 1 cut(s) 540
Cac8I GCNNGC 4 cut(s) 367, 630, 639, 949
CciI TCATGA 1 cut(s) 466
CfoI GCGC 1 cut(s) 371
Cfr13I GGNCC 6 cut(s) 15, 36, 320, 680, 883, 1135
Csp6I GTAC 3 cut(s) 5, 954, 993
CviAII CATG 4 cut(s) 171, 467, 491, 934
CviQI GTAC 3 cut(s) 5, 954, 993
DdeI CTNAG 4 cut(s) 214, 633, 795, 1143
DpnI GATC 5 cut(s) 47, 114, 594, 711, 1130
DpnII GATC 5 cut(s) 45, 112, 592, 709, 1128
Eam1104I CTCTTC 1 cut(s) 585
EarI CTCTTC 1 cut(s) 585
Ecl136II GAGCTC 1 cut(s) 578
Eco130I CCWWGG 4 cut(s) 170, 422, 509, 894
Eco147I AGGCCT 1 cut(s) 246
Eco24I GRGCYC 1 cut(s) 580
Eco47I GGWCC 1 cut(s) 15
Eco53kI GAGCTC 1 cut(s) 578
Eco57I CTGAAG 1 cut(s) 671
EcoICRI GAGCTC 1 cut(s) 578
EcoO109I RGGNCCY 3 cut(s) 15, 680, 1135
EcoRI GAATTC 1 cut(s) 824
EcoRII CCWGG 3 cut(s) 18, 547, 623
EcoT14I CCWWGG 4 cut(s) 170, 422, 509, 894
EcoT38I GRGCYC 1 cut(s) 580
ErhI CCWWGG 4 cut(s) 170, 422, 509, 894
FaeI CATG 4 cut(s) 174, 470, 494, 937
FaqI GGGAC 1 cut(s) 28
FatI CATG 4 cut(s) 170, 466, 490, 933
FauI CCCGC 1 cut(s) 1140
FauNDI CATATG 2 cut(s) 700, 879
FbaI TGATCA 1 cut(s) 1128
FblI GTMKAC 3 cut(s) 201, 846, 1159
Fnu4HI GCNGC 5 cut(s) 600, 615, 729, 737, 1116
FokI GGATG 4 cut(s) 232, 405, 869, 1164
FriOI GRGCYC 1 cut(s) 580
Fsp4HI GCNGC 5 cut(s) 600, 615, 729, 737, 1116
FspBI CTAG 3 cut(s) 138, 890, 1119
GlaI GCGC 1 cut(s) 370
GluI GCNGC 5 cut(s) 600, 615, 729, 737, 1116
GsuI CTGGAG 3 cut(s) 372, 766, 1046
HaeII RGCGCY 1 cut(s) 372
HaeIII GGCC 7 cut(s) 38, 246, 321, 681, 867, 885, 1136
HapII CCGG 2 cut(s) 63, 520
HhaI GCGC 1 cut(s) 371
Hin1II CATG 4 cut(s) 174, 470, 494, 937
Hin6I GCGC 1 cut(s) 369
HinP1I GCGC 1 cut(s) 369
HincII GTYRAC 1 cut(s) 483
HindII GTYRAC 1 cut(s) 483
HinfI GANTC 3 cut(s) 73, 484, 923
HpaII CCGG 2 cut(s) 63, 520
HphI GGTGA 3 cut(s) 463, 559, 1138
Hpy166II GTNNAC 4 cut(s) 202, 483, 847, 1160
Hpy188I TCNGA 6 cut(s) 32, 50, 78, 112, 840, 1007
Hpy8I GTNNAC 4 cut(s) 202, 483, 847, 1160
HpyAV CCTTC 2 cut(s) 693, 793
HpyCH4III ACNGT 4 cut(s) 695, 723, 992, 1022
HpyCH4IV ACGT 2 cut(s) 379, 995
HpyCH4V TGCA 9 cut(s) 275, 287, 338, 365, 436, 494, 602, 739, 951
HpyF10VI GCNNNNNNNGC 9 cut(s) 172, 293, 596, 620, 629, 634, 638, 957, 1115
HpyF3I CTNAG 4 cut(s) 214, 633, 795, 1143
HpySE526I ACGT 2 cut(s) 379, 995
Hsp92II CATG 4 cut(s) 174, 470, 494, 937
HspAI GCGC 1 cut(s) 369
KflI GGGWCCC 1 cut(s) 15
Kpn2I TCCGGA 1 cut(s) 519
Ksp22I TGATCA 1 cut(s) 1128
Kzo9I GATC 5 cut(s) 45, 112, 592, 709, 1128
LguI GCTCTTC 1 cut(s) 585
LmnI GCTCC 7 cut(s) 23, 65, 391, 463, 575, 753, 1083
Lsp1109I GCAGC 5 cut(s) 586, 601, 723, 740, 1102
LweI GCATC 4 cut(s) 210, 262, 347, 892
MaeI CTAG 3 cut(s) 138, 890, 1119
MaeII ACGT 2 cut(s) 379, 995
MaeIII GTNAC 3 cut(s) 133, 299, 426
MalI GATC 5 cut(s) 47, 114, 594, 711, 1130
MbiI CCGCTC 1 cut(s) 1147
MboI GATC 5 cut(s) 45, 112, 592, 709, 1128
MboII GAAGA 2 cut(s) 572, 798
MflI RGATCY 1 cut(s) 709
MhlI GDGCHC 2 cut(s) 100, 580
MluCI AATT 4 cut(s) 153, 504, 771, 824
MlyI GAGTC 1 cut(s) 478
MmeI TCCRAC 1 cut(s) 1061
MroI TCCGGA 1 cut(s) 519
MroXI GAANNNNTTC 1 cut(s) 694
MseI TTAA 3 cut(s) 156, 606, 1098
MspCI CTTAAG 1 cut(s) 605
MspI CCGG 2 cut(s) 63, 520
MspR9I CCNGG 3 cut(s) 20, 549, 625
MvaI CCWGG 3 cut(s) 20, 549, 625
MvnI CGCG 1 cut(s) 540
MwoI GCNNNNNNNGC 9 cut(s) 172, 293, 596, 620, 629, 634, 638, 957, 1115
NcoI CCATGG 1 cut(s) 170
NdeI CATATG 2 cut(s) 700, 879
NdeII GATC 5 cut(s) 45, 112, 592, 709, 1128
NlaIII CATG 4 cut(s) 174, 470, 494, 937
NlaIV GGNNCC 4 cut(s) 16, 17, 642, 982
NmeAIII GCCGAG 1 cut(s) 1135
NmuCI GTSAC 2 cut(s) 133, 426
NruI TCGCGA 1 cut(s) 540
NspI RCATGY 1 cut(s) 937
PagI TCATGA 1 cut(s) 466
PasI CCCWGGG 1 cut(s) 19
PceI AGGCCT 1 cut(s) 246
PciSI GCTCTTC 1 cut(s) 585
PdmI GAANNNNTTC 1 cut(s) 694
PfeI GAWTC 2 cut(s) 73, 923
PflFI GACNNNGTC 1 cut(s) 206
PflMI CCANNNNNTGG 2 cut(s) 1055, 1080
PkrI GCNGC 5 cut(s) 601, 616, 730, 738, 1117
PleI GAGTC 1 cut(s) 478
PpsI GAGTC 1 cut(s) 478
Ppu21I YACGTR 1 cut(s) 996
PpuMI RGGWCCY 1 cut(s) 15
PsiI TTATAA 1 cut(s) 818
Psp124BI GAGCTC 1 cut(s) 580
Psp1406I AACGTT 1 cut(s) 379
Psp5II RGGWCCY 1 cut(s) 15
Psp6I CCWGG 3 cut(s) 18, 547, 623
PspGI CCWGG 3 cut(s) 18, 547, 623
PspN4I GGNNCC 4 cut(s) 16, 17, 642, 982
PspPI GGNCC 6 cut(s) 15, 36, 320, 680, 883, 1135
PspPPI RGGWCCY 1 cut(s) 15
PstI CTGCAG 1 cut(s) 741
PsuI RGATCY 1 cut(s) 709
PsyI GACNNNGTC 1 cut(s) 206
RruI TCGCGA 1 cut(s) 540
RsaI GTAC 3 cut(s) 6, 955, 994
RsaNI GTAC 3 cut(s) 5, 954, 993
SacI GAGCTC 1 cut(s) 580
SapI GCTCTTC 1 cut(s) 585
SaqAI TTAA 3 cut(s) 156, 606, 1098
SatI GCNGC 5 cut(s) 600, 615, 729, 737, 1116
Sau3AI GATC 5 cut(s) 45, 112, 592, 709, 1128
Sau96I GGNCC 6 cut(s) 15, 36, 320, 680, 883, 1135
ScaI AGTACT 1 cut(s) 955
SchI GAGTC 1 cut(s) 478
ScrFI CCNGG 3 cut(s) 20, 549, 625
SduI GDGCHC 2 cut(s) 100, 580
SfaNI GCATC 4 cut(s) 210, 262, 347, 892
SfcI CTRYAG 1 cut(s) 737
SinI GGWCC 1 cut(s) 15
SmlI CTYRAG 1 cut(s) 605
SmoI CTYRAG 1 cut(s) 605
Sse9I AATT 4 cut(s) 153, 504, 771, 824
SseBI AGGCCT 1 cut(s) 246
SsiI CCGC 2 cut(s) 233, 1147
SspMI CTAG 3 cut(s) 138, 890, 1119
SstI GAGCTC 1 cut(s) 580
StuI AGGCCT 1 cut(s) 246
StyD4I CCNGG 3 cut(s) 18, 547, 623
StyI CCWWGG 4 cut(s) 170, 422, 509, 894
TaaI ACNGT 4 cut(s) 695, 723, 992, 1022
TaiI ACGT 2 cut(s) 382, 998
TaqI TCGA 1 cut(s) 130
TasI AATT 4 cut(s) 153, 504, 771, 824
TatI WGTACW 1 cut(s) 953
TfiI GAWTC 2 cut(s) 73, 923
Tru1I TTAA 3 cut(s) 156, 606, 1098
Tru9I TTAA 3 cut(s) 156, 606, 1098
TscAI CASTG 4 cut(s) 922, 995, 1060, 1111
TseFI GTSAC 2 cut(s) 133, 426
TseI GCWGC 5 cut(s) 599, 614, 728, 736, 1115
Tsp45I GTSAC 2 cut(s) 133, 426
TspDTI ATGAA 2 cut(s) 572, 687
TspRI CASTG 4 cut(s) 922, 995, 1060, 1111
Tth111I GACNNNGTC 1 cut(s) 206
Van91I CCANNNNNTGG 2 cut(s) 1055, 1080
Vha464I CTTAAG 1 cut(s) 605
VpaK11BI GGWCC 1 cut(s) 15
XapI RAATTY 3 cut(s) 504, 771, 824
XceI RCATGY 1 cut(s) 937
XmiI GTMKAC 3 cut(s) 201, 846, 1159
XmnI GAANNNNTTC 1 cut(s) 694
XspI CTAG 3 cut(s) 138, 890, 1119
ZrmI AGTACT 1 cut(s) 955
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.