Rh3CG218700

Mitochondrial fission protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
OG0003516
Physical Location & Seq
Forward (+)
20361111 .. 20365073
3963 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG218700.1

Sequence Viewer

Length: 1005 bp
ATGGCGGAGATGGTACAAGGTGGGACCCAGGGAGCTATCAGACGGGCCATTGTGATCGGAAATGGGTTTGCCGGAGCAGAGAATCAGAGCATTGGCCTGGTTCGTGCTCTGGGTCTATCTGATCGTCATTCTATTTATCGAGTTACTAGACCAAGAGGAGGAATTAACAGATGGCTTCCATGGCTTCCACTTTCTCTGCATAAGAAAGTAGACTATGTCATCTCAGGGATGCCCTTTTATGCAGAAAAGATAGGCCTCTCATCTGGTGTTGTGGAAGCTGATGCAAAGCAGATTGCAAATATGGCTCGTAACACATTTGACAAAGACGGCCCGTTGCTGGTAGTTGCATCTGGTCGGGATACCATTCCTGTTGCAAGCGCCATAAAACGTTTAGCTCCAGAAAATGTTTTTCTTGTCCAGATACAACATCCAAGGTCACATCTGCATAGGTTTGATTTGGTGATAGCTCCTCGTCATGATTATTACCCGTTGACTCCTCATGCACAGAAACAAATTCCTTGGTTTCTCCGGAGGTGGATTACCCCTCGTGAACCACCTGGCAAAAATGTGGTTCTCACCATTGGAGCTCTTCATCAGGCTGATCCTGCTGCACTTACGCGTGCCGCTTCTGCCTGGCATGCTGAACTGGCACCTCTCCCGAAGCCCTTGCTTGTAGTCAATATAGGAGGCCCTTCTGGAAACTGTTCATATGGTGTGGATCTTGCGAAACAGTTGGCAGCTATGCTACAGAATGTTCTGTGGAGCTGTGGAAGTGTGAGAATTTCTTTCTCTAGAAGAACTCCTGAGAAGGTGTCCAGACTTCTTATAAGAGAATTCAGTAATAATCCAAAAGTCTACATTTGGGATGGCGAAGGTTGCAATCCACATATGGGCCATCTAGCCTTGGCAGATGCTTTTATGATCACTGCTGATTCAGTCAGCATGTTGAGTGAGGCTTGCAGTACTGGGTATGTTTCAAGTTTGATGATGACGAGGTTTAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Mito_fiss_Elm1

Protein Analysis

334

Amino Acids

36.65

Weight (kDa)

9.77

Isoelectric Point (pI)

40.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mito_fiss_Elm1 PF06258 24 - 323 9.9e-89 Mitochondrial fission ELM1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 827
AccB1I GGYRCC 1 cut(s) 649
AccI GTMKAC 2 cut(s) 210, 855
AccII CGCG 1 cut(s) 619
AccIII TCCGGA 1 cut(s) 528
AciI CCGC 2 cut(s) 5, 624
AclI AACGTT 1 cut(s) 388
AclWI GGATC 2 cut(s) 596, 726
AcsI RAATTY 3 cut(s) 513, 780, 833
AfaI GTAC 2 cut(s) 15, 964
AfiI CCNNNNNNNGG 3 cut(s) 158, 337, 890
AflIII ACRYGT 1 cut(s) 617
AgsI TTSAA 1 cut(s) 978
AjnI CCWGG 4 cut(s) 27, 96, 556, 632
AluBI AGCT 7 cut(s) 35, 278, 395, 467, 587, 740, 765
AluI AGCT 7 cut(s) 35, 278, 395, 467, 587, 740, 765
Alw21I GWGCWC 2 cut(s) 109, 589
AlwI GGATC 2 cut(s) 596, 726
Aor13HI TCCGGA 1 cut(s) 528
AoxI GGCC 6 cut(s) 45, 94, 253, 328, 688, 892
ApeKI GCWGC 2 cut(s) 608, 737
ApoI RAATTY 3 cut(s) 513, 780, 833
Asp700I GAANNNNTTC 1 cut(s) 703
AspLEI GCGC 1 cut(s) 380
AspS9I GGNCC 5 cut(s) 24, 45, 329, 689, 892
AsuHPI GGTGA 2 cut(s) 472, 568
AvaII GGWCC 1 cut(s) 24
BanI GGYRCC 1 cut(s) 649
BanII GRGCYC 1 cut(s) 589
BauI CACGAG 1 cut(s) 546
Bbv12I GWGCWC 2 cut(s) 109, 589
BbvI GCAGC 2 cut(s) 595, 749
BccI CCATC 4 cut(s) 4, 165, 860, 903
BceAI ACGGC 1 cut(s) 343
BcgI CGANNNNNNTGC 2 cut(s) 649, 683
BciT130I CCWGG 4 cut(s) 29, 98, 558, 634
BciVI GTATCC 1 cut(s) 352
BclI TGATCA 1 cut(s) 921
BfaI CTAG 3 cut(s) 147, 792, 899
BfmI CTRYAG 1 cut(s) 746
BfoI RGCGCY 1 cut(s) 381
BfuI GTATCC 1 cut(s) 352
BisI GCNGC 3 cut(s) 609, 624, 738
BlsI GCNGC 3 cut(s) 610, 625, 739
BmcAI AGTACT 1 cut(s) 964
Bme1390I CCNGG 4 cut(s) 29, 98, 558, 634
Bme18I GGWCC 1 cut(s) 24
BmgT120I GGNCC 5 cut(s) 24, 45, 329, 689, 892
BmiI GGNNCC 3 cut(s) 25, 26, 651
BmrFI CCNGG 4 cut(s) 29, 98, 558, 634
BmrI ACTGGG 1 cut(s) 975
BmsI GCATC 4 cut(s) 219, 271, 356, 901
BmuI ACTGGG 1 cut(s) 975
BpmI CTGGAG 1 cut(s) 381
BsaJI CCNNGG 6 cut(s) 27, 28, 179, 431, 518, 903
BsaWI WCCGGW 1 cut(s) 528
Bsc4I CCNNNNNNNGG 3 cut(s) 158, 337, 890
Bse1I ACTGG 2 cut(s) 651, 970
BseAI TCCGGA 1 cut(s) 528
BseBI CCWGG 4 cut(s) 29, 98, 558, 634
BseDI CCNNGG 6 cut(s) 27, 28, 179, 431, 518, 903
BseGI GGATG 3 cut(s) 234, 427, 871
BseLI CCNNNNNNNGG 3 cut(s) 158, 337, 890
BseMII CTCAG 2 cut(s) 237, 795
BseNI ACTGG 2 cut(s) 651, 970
BseRI GAGGAG 3 cut(s) 171, 459, 486
BseXI GCAGC 2 cut(s) 595, 749
BsgI GTGCAG 1 cut(s) 594
Bsh1236I CGCG 1 cut(s) 619
BshFI GGCC 6 cut(s) 47, 96, 255, 330, 690, 894
BshNI GGYRCC 1 cut(s) 649
BsiHKAI GWGCWC 2 cut(s) 109, 589
BsiSI CCGG 2 cut(s) 72, 529
BslFI GGGAC 1 cut(s) 37
BslI CCNNNNNNNGG 3 cut(s) 158, 337, 890
BsmFI GGGAC 1 cut(s) 37
BsnI GGCC 6 cut(s) 47, 96, 255, 330, 690, 894
Bsp1286I GDGCHC 2 cut(s) 109, 589
Bsp13I TCCGGA 1 cut(s) 528
Bsp143I GATC 5 cut(s) 54, 121, 601, 718, 921
Bsp19I CCATGG 1 cut(s) 179
BspACI CCGC 2 cut(s) 5, 624
BspANI GGCC 6 cut(s) 47, 96, 255, 330, 690, 894
BspCNI CTCAG 2 cut(s) 236, 796
BspEI TCCGGA 1 cut(s) 528
BspFNI CGCG 1 cut(s) 619
BspHI TCATGA 1 cut(s) 475
BspLI GGNNCC 3 cut(s) 25, 26, 651
BspPI GGATC 2 cut(s) 596, 726
BspQI GCTCTTC 1 cut(s) 594
BspT107I GGYRCC 1 cut(s) 649
BsrI ACTGG 2 cut(s) 651, 970
BssECI CCNNGG 6 cut(s) 27, 28, 179, 431, 518, 903
BssMI GATC 5 cut(s) 54, 121, 601, 718, 921
BssSI CACGAG 1 cut(s) 546
BssT1I CCWWGG 4 cut(s) 179, 431, 518, 903
Bst2BI CACGAG 1 cut(s) 546
Bst2UI CCWGG 4 cut(s) 29, 98, 558, 634
Bst4CI ACNGT 2 cut(s) 704, 732
Bst6I CTCTTC 1 cut(s) 594
BstC8I GCNNGC 4 cut(s) 376, 621, 639, 958
BstDEI CTNAG 2 cut(s) 223, 804
BstDSI CCRYGG 1 cut(s) 179
BstF5I GGATG 3 cut(s) 234, 427, 871
BstFNI CGCG 1 cut(s) 619
BstH2I RGCGCY 1 cut(s) 381
BstHHI GCGC 1 cut(s) 380
BstKTI GATC 5 cut(s) 57, 124, 604, 721, 924
BstMBI GATC 5 cut(s) 54, 121, 601, 718, 921
BstMWI GCNNNNNNNGC 7 cut(s) 181, 302, 605, 629, 638, 647, 876
BstNI CCWGG 4 cut(s) 29, 98, 558, 634
BstNSI RCATGY 2 cut(s) 641, 946
BstSCI CCNGG 4 cut(s) 27, 96, 556, 632
BstSFI CTRYAG 1 cut(s) 746
BstUI CGCG 1 cut(s) 619
BstV1I GCAGC 2 cut(s) 595, 749
BstX2I RGATCY 1 cut(s) 718
BstYI RGATCY 1 cut(s) 718
BsuI GTATCC 1 cut(s) 352
BsuRI GGCC 6 cut(s) 47, 96, 255, 330, 690, 894
BtgI CCRYGG 1 cut(s) 179
BtsCI GGATG 3 cut(s) 234, 427, 871
BtsI GCAGTG 1 cut(s) 924
BtsIMutI CAGTG 1 cut(s) 924
Cac8I GCNNGC 4 cut(s) 376, 621, 639, 958
CciI TCATGA 1 cut(s) 475
CfoI GCGC 1 cut(s) 380
Cfr13I GGNCC 5 cut(s) 24, 45, 329, 689, 892
Csp6I GTAC 2 cut(s) 14, 963
CviAII CATG 5 cut(s) 180, 476, 500, 638, 943
CviQI GTAC 2 cut(s) 14, 963
DdeI CTNAG 2 cut(s) 223, 804
DpnI GATC 5 cut(s) 56, 123, 603, 720, 923
DpnII GATC 5 cut(s) 54, 121, 601, 718, 921
Eam1104I CTCTTC 1 cut(s) 594
EarI CTCTTC 1 cut(s) 594
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 1 cut(s) 587
Eco130I CCWWGG 4 cut(s) 179, 431, 518, 903
Eco147I AGGCCT 1 cut(s) 255
Eco24I GRGCYC 1 cut(s) 589
Eco47I GGWCC 1 cut(s) 24
Eco53kI GAGCTC 1 cut(s) 587
EcoICRI GAGCTC 1 cut(s) 587
EcoO109I RGGNCCY 2 cut(s) 24, 689
EcoRI GAATTC 1 cut(s) 833
EcoRII CCWGG 4 cut(s) 27, 96, 556, 632
EcoT14I CCWWGG 4 cut(s) 179, 431, 518, 903
EcoT38I GRGCYC 1 cut(s) 589
ErhI CCWWGG 4 cut(s) 179, 431, 518, 903
FaeI CATG 5 cut(s) 183, 479, 503, 641, 946
FaqI GGGAC 1 cut(s) 37
FatI CATG 5 cut(s) 179, 475, 499, 637, 942
FauNDI CATATG 2 cut(s) 709, 888
FbaI TGATCA 1 cut(s) 921
FblI GTMKAC 2 cut(s) 210, 855
Fnu4HI GCNGC 3 cut(s) 609, 624, 738
FokI GGATG 3 cut(s) 241, 414, 878
FriOI GRGCYC 1 cut(s) 589
Fsp4HI GCNGC 3 cut(s) 609, 624, 738
FspBI CTAG 3 cut(s) 147, 792, 899
GlaI GCGC 1 cut(s) 379
GluI GCNGC 3 cut(s) 609, 624, 738
GsuI CTGGAG 1 cut(s) 381
HaeII RGCGCY 1 cut(s) 381
HaeIII GGCC 6 cut(s) 47, 96, 255, 330, 690, 894
HapII CCGG 2 cut(s) 72, 529
HhaI GCGC 1 cut(s) 380
Hin1II CATG 5 cut(s) 183, 479, 503, 641, 946
Hin6I GCGC 1 cut(s) 378
HinP1I GCGC 1 cut(s) 378
HincII GTYRAC 1 cut(s) 492
HindII GTYRAC 1 cut(s) 492
HinfI GANTC 3 cut(s) 82, 493, 932
HpaII CCGG 2 cut(s) 72, 529
HphI GGTGA 2 cut(s) 472, 568
Hpy166II GTNNAC 4 cut(s) 211, 492, 551, 856
Hpy188I TCNGA 4 cut(s) 41, 59, 87, 121
Hpy8I GTNNAC 4 cut(s) 211, 492, 551, 856
HpyAV CCTTC 3 cut(s) 702, 802, 866
HpyCH4III ACNGT 2 cut(s) 704, 732
HpyCH4IV ACGT 1 cut(s) 388
HpyF10VI GCNNNNNNNGC 7 cut(s) 181, 302, 605, 629, 638, 647, 876
HpyF3I CTNAG 2 cut(s) 223, 804
HpySE526I ACGT 1 cut(s) 388
Hsp92II CATG 5 cut(s) 183, 479, 503, 641, 946
HspAI GCGC 1 cut(s) 378
KflI GGGWCCC 1 cut(s) 24
Kpn2I TCCGGA 1 cut(s) 528
Ksp22I TGATCA 1 cut(s) 921
Kzo9I GATC 5 cut(s) 54, 121, 601, 718, 921
LguI GCTCTTC 1 cut(s) 594
LmnI GCTCC 6 cut(s) 32, 74, 400, 472, 584, 762
Lsp1109I GCAGC 2 cut(s) 595, 749
LweI GCATC 4 cut(s) 219, 271, 356, 901
MaeI CTAG 3 cut(s) 147, 792, 899
MaeII ACGT 1 cut(s) 388
MaeIII GTNAC 3 cut(s) 142, 308, 435
MalI GATC 5 cut(s) 56, 123, 603, 720, 923
MboI GATC 5 cut(s) 54, 121, 601, 718, 921
MboII GAAGA 2 cut(s) 581, 807
MflI RGATCY 1 cut(s) 718
MhlI GDGCHC 2 cut(s) 109, 589
MluCI AATT 4 cut(s) 162, 513, 780, 833
MluI ACGCGT 1 cut(s) 617
MlyI GAGTC 1 cut(s) 487
MroI TCCGGA 1 cut(s) 528
MroXI GAANNNNTTC 1 cut(s) 703
MseI TTAA 2 cut(s) 165, 999
MspI CCGG 2 cut(s) 72, 529
MspR9I CCNGG 4 cut(s) 29, 98, 558, 634
MvaI CCWGG 4 cut(s) 29, 98, 558, 634
MvnI CGCG 1 cut(s) 619
MwoI GCNNNNNNNGC 7 cut(s) 181, 302, 605, 629, 638, 647, 876
NcoI CCATGG 1 cut(s) 179
NdeI CATATG 2 cut(s) 709, 888
NdeII GATC 5 cut(s) 54, 121, 601, 718, 921
NlaIII CATG 5 cut(s) 183, 479, 503, 641, 946
NlaIV GGNNCC 3 cut(s) 25, 26, 651
NmuCI GTSAC 1 cut(s) 435
NspI RCATGY 2 cut(s) 641, 946
PaeI GCATGC 1 cut(s) 641
PagI TCATGA 1 cut(s) 475
PasI CCCWGGG 1 cut(s) 28
PceI AGGCCT 1 cut(s) 255
PciSI GCTCTTC 1 cut(s) 594
PdmI GAANNNNTTC 1 cut(s) 703
PfeI GAWTC 2 cut(s) 82, 932
PflFI GACNNNGTC 1 cut(s) 215
PkrI GCNGC 3 cut(s) 610, 625, 739
PleI GAGTC 1 cut(s) 487
PpsI GAGTC 1 cut(s) 487
PpuMI RGGWCCY 1 cut(s) 24
PsiI TTATAA 1 cut(s) 827
Psp124BI GAGCTC 1 cut(s) 589
Psp1406I AACGTT 1 cut(s) 388
Psp5II RGGWCCY 1 cut(s) 24
Psp6I CCWGG 4 cut(s) 27, 96, 556, 632
PspGI CCWGG 4 cut(s) 27, 96, 556, 632
PspN4I GGNNCC 3 cut(s) 25, 26, 651
PspPI GGNCC 5 cut(s) 24, 45, 329, 689, 892
PspPPI RGGWCCY 1 cut(s) 24
PsuI RGATCY 1 cut(s) 718
PsyI GACNNNGTC 1 cut(s) 215
RsaI GTAC 2 cut(s) 15, 964
RsaNI GTAC 2 cut(s) 14, 963
SacI GAGCTC 1 cut(s) 589
SapI GCTCTTC 1 cut(s) 594
SaqAI TTAA 2 cut(s) 165, 999
SatI GCNGC 3 cut(s) 609, 624, 738
Sau3AI GATC 5 cut(s) 54, 121, 601, 718, 921
Sau96I GGNCC 5 cut(s) 24, 45, 329, 689, 892
ScaI AGTACT 1 cut(s) 964
SchI GAGTC 1 cut(s) 487
ScrFI CCNGG 4 cut(s) 29, 98, 558, 634
SduI GDGCHC 2 cut(s) 109, 589
SfaNI GCATC 4 cut(s) 219, 271, 356, 901
SfcI CTRYAG 1 cut(s) 746
SinI GGWCC 1 cut(s) 24
SphI GCATGC 1 cut(s) 641
Sse9I AATT 4 cut(s) 162, 513, 780, 833
SseBI AGGCCT 1 cut(s) 255
SsiI CCGC 2 cut(s) 5, 624
SspMI CTAG 3 cut(s) 147, 792, 899
SstI GAGCTC 1 cut(s) 589
StuI AGGCCT 1 cut(s) 255
StyD4I CCNGG 4 cut(s) 27, 96, 556, 632
StyI CCWWGG 4 cut(s) 179, 431, 518, 903
TaaI ACNGT 2 cut(s) 704, 732
TaiI ACGT 1 cut(s) 391
TaqI TCGA 1 cut(s) 139
TasI AATT 4 cut(s) 162, 513, 780, 833
TatI WGTACW 1 cut(s) 962
TauI GCSGC 1 cut(s) 626
TfiI GAWTC 2 cut(s) 82, 932
Tru1I TTAA 2 cut(s) 165, 999
Tru9I TTAA 2 cut(s) 165, 999
TscAI CASTG 1 cut(s) 931
TseFI GTSAC 1 cut(s) 435
TseI GCWGC 2 cut(s) 608, 737
Tsp45I GTSAC 1 cut(s) 435
TspDTI ATGAA 2 cut(s) 581, 696
TspRI CASTG 1 cut(s) 931
Tth111I GACNNNGTC 1 cut(s) 215
VpaK11BI GGWCC 1 cut(s) 24
XapI RAATTY 3 cut(s) 513, 780, 833
XbaI TCTAGA 1 cut(s) 791
XceI RCATGY 2 cut(s) 641, 946
XmiI GTMKAC 2 cut(s) 210, 855
XmnI GAANNNNTTC 1 cut(s) 703
XspI CTAG 3 cut(s) 147, 792, 899
ZrmI AGTACT 1 cut(s) 964
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.