Rh3BG223800

Mitochondrial fission protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
OG0003516
Physical Location & Seq
Forward (+)
20418251 .. 20422213
3963 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG223800.1

Sequence Viewer

Length: 1122 bp
ATGTTTCGGATTCTTTGTAATTTGAATTGGGTTTCTGGTTTTCTTGGTTGGGTTGCAAACCCCATTTTGATTGGTTTAAAGCGAGTTACTAGACCAAGAGGAGGAATTAACAGATGGCTTCCATGGCTTCCACTTTCTCTGCATAAGAAAGTAGACTATGTCATCTCAGGGATGCCCTTTTATGCAGAAAAGATAGGCCTCTCATCTGGTGTTGTGGAAGCTGATGCAAAGCAGATTGCAAATATGGCTCGTAACACATTTGACAAAGACGGCCCGTTGCTGGTAGTTGCATCTGGTCGGGATACCATTCCTGTTGCAAGCGCCATAAAACGTTTAGCTCCAGAAAATGTTTTTCTTGTCCAGATACAACATCCAAGGTCACATCTGCATAGGTTTGATTTGGTGATAGCTCCTCGTCATGATTATTACCCGTTGACTCCTCATGCACAGAAACAAATTCCTTGGTTTCTCCGGAGGTGGATTACCCCTCGTGAACCACCTGGCAAAAATGTGGTTCTCACCATTGGAGCTCTTCATCAGGCTGATCCTGCTGCACTTACGCGTGCCGCTTCTGCCTGGCATGCTGAACTGGCACCTCTCCCGAAGCCCTTGCTTGTAGTCAATATAGGAGGCCCTTCTGGAAACTGTTCATATGGTGTGGATCTTGCGAAACAGTTGGCAGCTATGCTACAGAATGTTCTGTGGAGCTGTGGAAGTGTGAGAATTTCTTTCTCTAGAAGAACTCCTGAGAAGGTGTCCAGACTTCTTATAAGAGAATTCAGTAATAATCCAAAAGTCTACATTTGGGATGGCGAAGGTTGCAATCCACATATGGGCCATCTAGCCTTGGCAGATGCTTTTATGATCACTGCTGATTCAGTCAGCATGTTGAGTGAGGCTTGCAGTACTGGCAAACCTGTGTATGTGATTGGCGCTGAACACTGTACATGGAAGTTCACAGACTTCCAGAACCGTCTGGAGGAACGGGGAGTAGTTCGACCATTCACTGGTAAAGAGGATATGTCCAAGTGTTGGACCTATGTTCCACTTAATGACACTGCCGAGGCTGCTAGTCAGGTGATCAAGGCCCTTGCTGAGCGGGGATGGAGTATACTTATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Mito_fiss_Elm1

Protein Analysis

373

Amino Acids

41.5

Weight (kDa)

9.45

Isoelectric Point (pI)

40.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mito_fiss_Elm1 PF06258 47 - 364 8.5e-105 Mitochondrial fission ELM1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 770
AccB1I GGYRCC 1 cut(s) 592
AccB7I CCANNNNNTGG 2 cut(s) 1007, 1032
AccBSI CCGCTC 1 cut(s) 1099
AccI GTMKAC 3 cut(s) 153, 798, 1111
AccII CGCG 1 cut(s) 562
AccIII TCCGGA 1 cut(s) 471
AciI CCGC 2 cut(s) 567, 1099
AclI AACGTT 1 cut(s) 331
AclWI GGATC 2 cut(s) 539, 669
AcsI RAATTY 3 cut(s) 456, 723, 776
AfaI GTAC 2 cut(s) 907, 946
AfiI CCNNNNNNNGG 6 cut(s) 101, 280, 833, 979, 1007, 1032
AflIII ACRYGT 1 cut(s) 560
AgsI TTSAA 1 cut(s) 25
AjnI CCWGG 2 cut(s) 499, 575
AluBI AGCT 6 cut(s) 221, 338, 410, 530, 683, 708
AluI AGCT 6 cut(s) 221, 338, 410, 530, 683, 708
Alw21I GWGCWC 1 cut(s) 532
AlwI GGATC 2 cut(s) 539, 669
Aor13HI TCCGGA 1 cut(s) 471
AoxI GGCC 5 cut(s) 196, 271, 631, 835, 1086
ApeKI GCWGC 3 cut(s) 551, 680, 1067
ApoI RAATTY 3 cut(s) 456, 723, 776
Asp700I GAANNNNTTC 1 cut(s) 646
AspLEI GCGC 2 cut(s) 323, 935
AspS9I GGNCC 5 cut(s) 272, 632, 835, 1035, 1087
AsuHPI GGTGA 3 cut(s) 415, 511, 1090
AvaII GGWCC 1 cut(s) 1035
BanI GGYRCC 1 cut(s) 592
BanII GRGCYC 1 cut(s) 532
BauI CACGAG 1 cut(s) 489
Bbv12I GWGCWC 1 cut(s) 532
BbvI GCAGC 3 cut(s) 538, 692, 1054
BccI CCATC 4 cut(s) 108, 803, 846, 1098
BceAI ACGGC 1 cut(s) 286
BcgI CGANNNNNNTGC 2 cut(s) 592, 626
BciT130I CCWGG 2 cut(s) 501, 577
BciVI GTATCC 1 cut(s) 295
BclI TGATCA 2 cut(s) 864, 1080
BfaI CTAG 4 cut(s) 90, 735, 842, 1071
BfmI CTRYAG 1 cut(s) 689
BfoI RGCGCY 2 cut(s) 324, 936
BfuI GTATCC 1 cut(s) 295
BisI GCNGC 4 cut(s) 552, 567, 681, 1068
BlpI GCTNAGC 1 cut(s) 1095
BlsI GCNGC 4 cut(s) 553, 568, 682, 1069
BmcAI AGTACT 1 cut(s) 907
Bme1390I CCNGG 2 cut(s) 501, 577
Bme18I GGWCC 1 cut(s) 1035
BmgT120I GGNCC 5 cut(s) 272, 632, 835, 1035, 1087
BmiI GGNNCC 1 cut(s) 594
BmrFI CCNGG 2 cut(s) 501, 577
BmsI GCATC 4 cut(s) 162, 214, 299, 844
BpmI CTGGAG 2 cut(s) 324, 998
Bpu1102I GCTNAGC 1 cut(s) 1095
BsaJI CCNNGG 5 cut(s) 122, 374, 461, 846, 1062
BsaWI WCCGGW 1 cut(s) 471
Bsc4I CCNNNNNNNGG 6 cut(s) 101, 280, 833, 979, 1007, 1032
Bse1I ACTGG 3 cut(s) 594, 913, 1012
BseAI TCCGGA 1 cut(s) 471
BseBI CCWGG 2 cut(s) 501, 577
BseDI CCNNGG 5 cut(s) 122, 374, 461, 846, 1062
BseGI GGATG 4 cut(s) 177, 370, 814, 1109
BseLI CCNNNNNNNGG 6 cut(s) 101, 280, 833, 979, 1007, 1032
BseMII CTCAG 3 cut(s) 180, 738, 1086
BseNI ACTGG 3 cut(s) 594, 913, 1012
BseRI GAGGAG 3 cut(s) 114, 402, 429
BseXI GCAGC 3 cut(s) 538, 692, 1054
BsgI GTGCAG 1 cut(s) 537
Bsh1236I CGCG 1 cut(s) 562
BshFI GGCC 5 cut(s) 198, 273, 633, 837, 1088
BshNI GGYRCC 1 cut(s) 592
BsiHKAI GWGCWC 1 cut(s) 532
BsiSI CCGG 1 cut(s) 472
BslI CCNNNNNNNGG 6 cut(s) 101, 280, 833, 979, 1007, 1032
BsnI GGCC 5 cut(s) 198, 273, 633, 837, 1088
Bsp1286I GDGCHC 1 cut(s) 532
Bsp13I TCCGGA 1 cut(s) 471
Bsp1407I TGTACA 1 cut(s) 944
Bsp143I GATC 4 cut(s) 544, 661, 864, 1080
Bsp1720I GCTNAGC 1 cut(s) 1095
Bsp19I CCATGG 1 cut(s) 122
BspACI CCGC 2 cut(s) 567, 1099
BspANI GGCC 5 cut(s) 198, 273, 633, 837, 1088
BspCNI CTCAG 3 cut(s) 179, 739, 1087
BspEI TCCGGA 1 cut(s) 471
BspFNI CGCG 1 cut(s) 562
BspHI TCATGA 1 cut(s) 418
BspLI GGNNCC 1 cut(s) 594
BspPI GGATC 2 cut(s) 539, 669
BspQI GCTCTTC 1 cut(s) 537
BspT107I GGYRCC 1 cut(s) 592
BsrBI CCGCTC 1 cut(s) 1099
BsrGI TGTACA 1 cut(s) 944
BsrI ACTGG 3 cut(s) 594, 913, 1012
BssECI CCNNGG 5 cut(s) 122, 374, 461, 846, 1062
BssMI GATC 4 cut(s) 544, 661, 864, 1080
BssNAI GTATAC 1 cut(s) 1112
BssSI CACGAG 1 cut(s) 489
BssT1I CCWWGG 4 cut(s) 122, 374, 461, 846
Bst1107I GTATAC 1 cut(s) 1112
Bst2BI CACGAG 1 cut(s) 489
Bst2UI CCWGG 2 cut(s) 501, 577
Bst4CI ACNGT 4 cut(s) 647, 675, 944, 974
Bst6I CTCTTC 1 cut(s) 537
BstAUI TGTACA 1 cut(s) 944
BstC8I GCNNGC 4 cut(s) 319, 564, 582, 901
BstDEI CTNAG 3 cut(s) 166, 747, 1095
BstDSI CCRYGG 1 cut(s) 122
BstF5I GGATG 4 cut(s) 177, 370, 814, 1109
BstFNI CGCG 1 cut(s) 562
BstH2I RGCGCY 2 cut(s) 324, 936
BstHHI GCGC 2 cut(s) 323, 935
BstKTI GATC 4 cut(s) 547, 664, 867, 1083
BstMBI GATC 4 cut(s) 544, 661, 864, 1080
BstMWI GCNNNNNNNGC 9 cut(s) 124, 245, 548, 572, 581, 590, 819, 909, 1067
BstNI CCWGG 2 cut(s) 501, 577
BstNSI RCATGY 2 cut(s) 584, 889
BstSCI CCNGG 2 cut(s) 499, 575
BstSFI CTRYAG 1 cut(s) 689
BstUI CGCG 1 cut(s) 562
BstV1I GCAGC 3 cut(s) 538, 692, 1054
BstX2I RGATCY 1 cut(s) 661
BstYI RGATCY 1 cut(s) 661
BstZ17I GTATAC 1 cut(s) 1112
BsuI GTATCC 1 cut(s) 295
BsuRI GGCC 5 cut(s) 198, 273, 633, 837, 1088
BtgI CCRYGG 1 cut(s) 122
BtsCI GGATG 4 cut(s) 177, 370, 814, 1109
BtsI GCAGTG 2 cut(s) 867, 1056
BtsIMutI CAGTG 4 cut(s) 867, 940, 1005, 1056
Cac8I GCNNGC 4 cut(s) 319, 564, 582, 901
CciI TCATGA 1 cut(s) 418
CfoI GCGC 2 cut(s) 323, 935
Cfr13I GGNCC 5 cut(s) 272, 632, 835, 1035, 1087
Csp6I GTAC 2 cut(s) 906, 945
CviAII CATG 6 cut(s) 123, 419, 443, 581, 886, 948
CviQI GTAC 2 cut(s) 906, 945
DdeI CTNAG 3 cut(s) 166, 747, 1095
DpnI GATC 4 cut(s) 546, 663, 866, 1082
DpnII GATC 4 cut(s) 544, 661, 864, 1080
DraI TTTAAA 1 cut(s) 78
Eam1104I CTCTTC 1 cut(s) 537
EarI CTCTTC 1 cut(s) 537
Ecl136II GAGCTC 1 cut(s) 530
Eco130I CCWWGG 4 cut(s) 122, 374, 461, 846
Eco147I AGGCCT 1 cut(s) 198
Eco24I GRGCYC 1 cut(s) 532
Eco47I GGWCC 1 cut(s) 1035
Eco53kI GAGCTC 1 cut(s) 530
EcoICRI GAGCTC 1 cut(s) 530
EcoO109I RGGNCCY 2 cut(s) 632, 1087
EcoRI GAATTC 1 cut(s) 776
EcoRII CCWGG 2 cut(s) 499, 575
EcoT14I CCWWGG 4 cut(s) 122, 374, 461, 846
EcoT38I GRGCYC 1 cut(s) 532
ErhI CCWWGG 4 cut(s) 122, 374, 461, 846
FaeI CATG 6 cut(s) 126, 422, 446, 584, 889, 951
FatI CATG 6 cut(s) 122, 418, 442, 580, 885, 947
FauI CCCGC 1 cut(s) 1092
FauNDI CATATG 2 cut(s) 652, 831
FbaI TGATCA 2 cut(s) 864, 1080
FblI GTMKAC 3 cut(s) 153, 798, 1111
Fnu4HI GCNGC 4 cut(s) 552, 567, 681, 1068
FokI GGATG 4 cut(s) 184, 357, 821, 1116
FriOI GRGCYC 1 cut(s) 532
Fsp4HI GCNGC 4 cut(s) 552, 567, 681, 1068
FspBI CTAG 4 cut(s) 90, 735, 842, 1071
GlaI GCGC 2 cut(s) 322, 934
GluI GCNGC 4 cut(s) 552, 567, 681, 1068
GsuI CTGGAG 2 cut(s) 324, 998
HaeII RGCGCY 2 cut(s) 324, 936
HaeIII GGCC 5 cut(s) 198, 273, 633, 837, 1088
HapII CCGG 1 cut(s) 472
HhaI GCGC 2 cut(s) 323, 935
Hin1II CATG 6 cut(s) 126, 422, 446, 584, 889, 951
Hin6I GCGC 2 cut(s) 321, 933
HinP1I GCGC 2 cut(s) 321, 933
HincII GTYRAC 1 cut(s) 435
HindII GTYRAC 1 cut(s) 435
HinfI GANTC 3 cut(s) 10, 436, 875
HpaII CCGG 1 cut(s) 472
HphI GGTGA 3 cut(s) 415, 511, 1090
Hpy166II GTNNAC 6 cut(s) 154, 435, 494, 799, 957, 1112
Hpy188I TCNGA 1 cut(s) 9
Hpy8I GTNNAC 6 cut(s) 154, 435, 494, 799, 957, 1112
HpyAV CCTTC 3 cut(s) 645, 745, 809
HpyCH4III ACNGT 4 cut(s) 647, 675, 944, 974
HpyCH4IV ACGT 1 cut(s) 331
HpyF10VI GCNNNNNNNGC 9 cut(s) 124, 245, 548, 572, 581, 590, 819, 909, 1067
HpyF3I CTNAG 3 cut(s) 166, 747, 1095
HpySE526I ACGT 1 cut(s) 331
Hsp92II CATG 6 cut(s) 126, 422, 446, 584, 889, 951
HspAI GCGC 2 cut(s) 321, 933
Kpn2I TCCGGA 1 cut(s) 471
Ksp22I TGATCA 2 cut(s) 864, 1080
Kzo9I GATC 4 cut(s) 544, 661, 864, 1080
LguI GCTCTTC 1 cut(s) 537
LmnI GCTCC 4 cut(s) 343, 415, 527, 705
Lsp1109I GCAGC 3 cut(s) 538, 692, 1054
LweI GCATC 4 cut(s) 162, 214, 299, 844
MaeI CTAG 4 cut(s) 90, 735, 842, 1071
MaeII ACGT 1 cut(s) 331
MaeIII GTNAC 3 cut(s) 85, 251, 378
MalI GATC 4 cut(s) 546, 663, 866, 1082
MbiI CCGCTC 1 cut(s) 1099
MboI GATC 4 cut(s) 544, 661, 864, 1080
MboII GAAGA 2 cut(s) 524, 750
MflI RGATCY 1 cut(s) 661
MhlI GDGCHC 1 cut(s) 532
MluCI AATT 6 cut(s) 19, 25, 105, 456, 723, 776
MluI ACGCGT 1 cut(s) 560
MlyI GAGTC 1 cut(s) 430
MmeI TCCRAC 1 cut(s) 1013
MroI TCCGGA 1 cut(s) 471
MroXI GAANNNNTTC 1 cut(s) 646
MseI TTAA 3 cut(s) 77, 108, 1050
MspI CCGG 1 cut(s) 472
MspR9I CCNGG 2 cut(s) 501, 577
MvaI CCWGG 2 cut(s) 501, 577
MvnI CGCG 1 cut(s) 562
MwoI GCNNNNNNNGC 9 cut(s) 124, 245, 548, 572, 581, 590, 819, 909, 1067
NcoI CCATGG 1 cut(s) 122
NdeI CATATG 2 cut(s) 652, 831
NdeII GATC 4 cut(s) 544, 661, 864, 1080
NlaIII CATG 6 cut(s) 126, 422, 446, 584, 889, 951
NlaIV GGNNCC 1 cut(s) 594
NmeAIII GCCGAG 1 cut(s) 1087
NmuCI GTSAC 1 cut(s) 378
NspI RCATGY 2 cut(s) 584, 889
PaeI GCATGC 1 cut(s) 584
PagI TCATGA 1 cut(s) 418
PceI AGGCCT 1 cut(s) 198
PciSI GCTCTTC 1 cut(s) 537
PdmI GAANNNNTTC 1 cut(s) 646
PfeI GAWTC 2 cut(s) 10, 875
PflFI GACNNNGTC 1 cut(s) 158
PflMI CCANNNNNTGG 2 cut(s) 1007, 1032
PkrI GCNGC 4 cut(s) 553, 568, 682, 1069
PleI GAGTC 1 cut(s) 430
PpsI GAGTC 1 cut(s) 430
PsiI TTATAA 1 cut(s) 770
Psp124BI GAGCTC 1 cut(s) 532
Psp1406I AACGTT 1 cut(s) 331
Psp6I CCWGG 2 cut(s) 499, 575
PspGI CCWGG 2 cut(s) 499, 575
PspN4I GGNNCC 1 cut(s) 594
PspPI GGNCC 5 cut(s) 272, 632, 835, 1035, 1087
PsuI RGATCY 1 cut(s) 661
PsyI GACNNNGTC 1 cut(s) 158
RsaI GTAC 2 cut(s) 907, 946
RsaNI GTAC 2 cut(s) 906, 945
SacI GAGCTC 1 cut(s) 532
SapI GCTCTTC 1 cut(s) 537
SaqAI TTAA 3 cut(s) 77, 108, 1050
SatI GCNGC 4 cut(s) 552, 567, 681, 1068
Sau3AI GATC 4 cut(s) 544, 661, 864, 1080
Sau96I GGNCC 5 cut(s) 272, 632, 835, 1035, 1087
ScaI AGTACT 1 cut(s) 907
SchI GAGTC 1 cut(s) 430
ScrFI CCNGG 2 cut(s) 501, 577
SduI GDGCHC 1 cut(s) 532
SfaNI GCATC 4 cut(s) 162, 214, 299, 844
SfcI CTRYAG 1 cut(s) 689
SinI GGWCC 1 cut(s) 1035
SphI GCATGC 1 cut(s) 584
Sse9I AATT 6 cut(s) 19, 25, 105, 456, 723, 776
SseBI AGGCCT 1 cut(s) 198
SsiI CCGC 2 cut(s) 567, 1099
SspMI CTAG 4 cut(s) 90, 735, 842, 1071
SstI GAGCTC 1 cut(s) 532
StuI AGGCCT 1 cut(s) 198
StyD4I CCNGG 2 cut(s) 499, 575
StyI CCWWGG 4 cut(s) 122, 374, 461, 846
TaaI ACNGT 4 cut(s) 647, 675, 944, 974
TaiI ACGT 1 cut(s) 334
TaqI TCGA 1 cut(s) 997
TasI AATT 6 cut(s) 19, 25, 105, 456, 723, 776
TatI WGTACW 2 cut(s) 905, 944
TauI GCSGC 1 cut(s) 569
TfiI GAWTC 2 cut(s) 10, 875
Tru1I TTAA 3 cut(s) 77, 108, 1050
Tru9I TTAA 3 cut(s) 77, 108, 1050
TscAI CASTG 4 cut(s) 874, 947, 1012, 1063
TseFI GTSAC 1 cut(s) 378
TseI GCWGC 3 cut(s) 551, 680, 1067
Tsp45I GTSAC 1 cut(s) 378
TspDTI ATGAA 2 cut(s) 524, 639
TspRI CASTG 4 cut(s) 874, 947, 1012, 1063
Tth111I GACNNNGTC 1 cut(s) 158
Van91I CCANNNNNTGG 2 cut(s) 1007, 1032
VpaK11BI GGWCC 1 cut(s) 1035
XapI RAATTY 3 cut(s) 456, 723, 776
XbaI TCTAGA 1 cut(s) 734
XceI RCATGY 2 cut(s) 584, 889
XmiI GTMKAC 3 cut(s) 153, 798, 1111
XmnI GAANNNNTTC 1 cut(s) 646
XspI CTAG 4 cut(s) 90, 735, 842, 1071
ZrmI AGTACT 1 cut(s) 907
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.