Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0003655

Physical Location & Seq

Genomic Coordinates Reverse (-)

95794 .. 101858

Gene Structure 6065 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000026027

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2157 bp

ATGGCGCCTTCCTCATCTGCAAGTTCGGGTGAAGATTCATCAACCCCGGACACCACCCAAAGCCACCTCCAGCATAGTTTCCTTCTTCACAAAGCATCTGATAAATTAATTTCAAGTGGCAAAGCCCGGAGGAGGAGGAGAATTGATCTGTCCCCTACAAAGACCGACGACGACAAGAAGCAATCCGATGATGAACGCTGGTTGAGAATGGAAGCTTTTCAGTTAGTTTGGTCAAGAATTGAATCCACTATCAACCACGTTCTGCGGAATATCAATGCTCGGGTTTTCGATCACATACGCCGCTGGGTATGGGATTCCTTCAATGCTATCAAACCACTTACCAGCATTTCTCCTGGCCCTTTTCCTATTGCCAGCCAAGTTACCTGTACACAGCTCTTCACTGGGCTCCTTCTCACCAATAATATGGAGTTTGTTGATGATATTTCGACATTTCAAGAGCTGGGCCTCTGCTTGAAATCCCATGGATGCCATGTGGCTAACCTTTCTTCCTTCGACTTTTCATCTAAGAATGGGATCGCTGCCTGTCTCACAAGTTTATTGAGACAGTTTCTCATGTCTACTTTTGATGCTGCTGATATGTCCATACTGGCATCATGGTACAGTCAGCAAGGAAACTATGGTTCCCCTGTGGTTGTCATTATAGATGATATGGAACGATGTTGTGGTGCTGTCTTGTCTGATTTCATTCTTATGTTGAGTGAATGGGTTGTGAAGATCCCAGTCATCTTAATAATGGGCGTTGCGACAACTCTGGATGCCCCTAGAAAAATACTTTCTTCAAATGTACTGCAGAAGTTGTGCCCTTGCAACTTCAAGTTGGGATCACCTGCTGAGAGGATGGATGCAGTTGTTGAGGCTGCTCTTGTGAGGCAGTGTTCTGGTTTTGTTGTTGGTCATAAGGTGGCTGTTTTTCTGCGGAACTACTTCTTAAATCAGGATGGTACATTGACATCTTTTGTTAGAGCATTGAAGATAGCATGTGTTCAACATTTTTCCACGGAGCCTTTAAGCTTCCTGCTTGGATGGTTGCTTGTTAAAGAAGACAGTAAGGGAGTTCAGAGTGAGAAAGCGGTCAAGCTTGCTTCTGAGCTTTTATCTCTTGCAAGGAATCAAATAGCTGAACAAACTGAAGTCACTATAGCTCATAGTTTGACAGAGTTGACGAAATTACAGAAGCTCTGGAGCACTGTTGTTCTGTGCTTATATGAAGCTGGGAAGTGTAACAAAACTCGATTGATAGACTTATTTTGTGAGGCACTTGATCCAGATACTTACAACTCATTGGCTTCTGACGGTGTTACTGGAACTGGAAAAGGTTTTGTTCAATCTTTGTCAAGCGATCACTGTATGCTTGAGCAGAACTTGAGCTACAGAAAGGGACGCCTTATTTGCCAATTATTAGGCAGAGTGAGGGATCTTCCTGCAGCATTGCTTTGTCGGCTGCTGAATAGTTGGAAAACTCTTACTGTGGATGTTCTTGAGATTCATGACAAGGTAAAGGAGCTACAGTCAATATTAAAATTAGACGAAGGAAGTTGTAGACCAGATTTGAAGGAGATATCCAGAAGACATACATCTTGGAGTCCCTTAAAGATCGGTGAATCACAATCAATAAATGAAAAAGCTGCTGTACTAATGGATTGCATGGTTAGGGATTTCATGAAGCCGATTGAGTGTACAGCTTTTCACGAAATTGTTTGCTATAGAAATGTTGAAAACCTTCAATCGGCATTAATTGGAGACTCACGGAAAATGATTCAAGTTGATCTTTTGGAGTTTCATAAAACCCTACAATGCAGTTGCTGCAGGAGGAGTGGCAACATACCATTGCCATCACTGCCTGATACGTCTATTATGTACACCCTGGCTCAGGAGCATGGCGATCTTATCAATCTTCATGACTGGTTCCAGTCTTTTAAAACCATTGTCATTAAGTACAGCAGAAAAGGGACAAGCAAACTGAAAAAGTCCCCACTTAAGAAAAGAAAGGAAAGGAATGAATCTGAAAACAAGAGTGAAGCATCCATTCAAGCCAGATTTTGCAGGGCAATCACAGAACTACAGATTACAGGTCTCATTCGGATGCCCAGCAAAAAACGTCGTGATTGTGTGCAGAGAGTGGCCTTTGGGCTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000781 GO:0000784 GO:0000808 GO:0003674 GO:0003676 GO:0003677 GO:0003688 GO:0003690 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005656 GO:0005664 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006267 GO:0006270 GO:0006725 GO:0006807 GO:0007049 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009743 GO:0009744 GO:0009791 GO:0009987 GO:0010033 GO:0016043 GO:0022402 GO:0022607 GO:0022622 GO:0031261 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0032993 GO:0033260 GO:0034285 GO:0034622 GO:0034641 GO:0034645 GO:0036387 GO:0036388 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0044786 GO:0046483 GO:0048364 GO:0048527 GO:0048528 GO:0048731 GO:0048856 GO:0050896 GO:0065003 GO:0065004 GO:0070013 GO:0071704 GO:0071824 GO:0071840 GO:0090304 GO:0090696 GO:0097159 GO:0098687 GO:0099402 GO:1901360 GO:1901363 GO:1901576 GO:1901700 GO:1902299 GO:1990837

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 ko04113 map04110 map04111 map04113

Pfam Domains

Protein Families

ORC3_N

Protein Analysis

719

Amino Acids

80.62

Weight (kDa)

8.75

Isoelectric Point (pI)

53.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ORC3_N	PF07034	44 - 346	1.7e-64	Origin recognition complex (ORC) subunit 3 N-terminus
WHD_ORC	PF18137	590 - 716	3.4e-28	Origin recognition complex winged helix C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003655)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G16690 AT5G16690
fragaria_vesca	FvH4_7g34260 FvH4_7g34260 FvH4_7g34260 FvH4_7g34260 FvH4_7g34260 FvH4_7g34260 FvH4_7g34260 FvH4_7g34260 FvH4_7g34260 FvH4_7g34260 FvH4_7g34260 FvH4_7g34260
malus_domestica	MD01G1239300.v1.1 MD07G1032700.v1.1
prunus_persica	Prupe.2G329300_v2.0.a1
pyrus_communis	pycom07g02310
rosa_chinensis	RchiOBHm_Chr1g0384611 RchiOBHm_Chr6g0290011
rosa_laevigata	RLG00000000745 RLG00000026027
rosa_multiflora	Rmu_co8125142.1_g000001 Rmu_co8285713.1_g000001 Rmu_sc0012136.1_g000030
rosa_roxburghii	Rroxscaffold_4G00276520
rosa_rugosa	Rorug01G0450000 Rorug01G0450100
rosa_samantha	Rh1AG348300 Rh1AG474600 Rh1BG432700 Rh1CG445900 Rh1DG465300 Rh5DG247400
rosa_wichuraiana	Rw1G039800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	856
Acc36I	ACCTGC	1 cut(s)	856
AccB1I	GGYRCC	1 cut(s)	4
AccI	GTMKAC	2 cut(s)	578, 1561
AciI	CCGC	4 cut(s)	265, 301, 937, 1091
AclWI	GGATC	5 cut(s)	542, 730, 850, 1277, 1443
AcuI	CTGAAG	1 cut(s)	1170
AcyI	GRCGYC	2 cut(s)	5, 1402
AfaI	GTAC	8 cut(s)	388, 620, 807, 964, 1653, 1699, 1880, 1958
AfiI	CCNNNNNNNGG	3 cut(s)	132, 1747, 1891
AflII	CTTAAG	1 cut(s)	1997
AjnI	CCWGG	2 cut(s)	352, 1884
Alw21I	GWGCWC	1 cut(s)	1208
Alw26I	GTCTC	4 cut(s)	551, 556, 1755, 2099
AlwI	GGATC	5 cut(s)	542, 730, 850, 1277, 1443
AlwNI	CAGNNNCTG	1 cut(s)	1824
Ama87I	CYCGRG	1 cut(s)	279
AoxI	GGCC	3 cut(s)	355, 463, 2142
ApeKI	GCWGC	7 cut(s)	539, 590, 878, 1445, 1462, 1646, 1824
ArsI	GACNNNNNNTTYG	2 cut(s)	1392, 1424
AseI	ATTAAT	2 cut(s)	107, 1754
Asp700I	GAANNNNTTC	3 cut(s)	216, 944, 1740
AspLEI	GCGC	1 cut(s)	7
AspS9I	GGNCC	2 cut(s)	356, 463
AsuC2I	CCSGG	2 cut(s)	47, 127
AsuHPI	GGTGA	4 cut(s)	41, 406, 837, 1631
AvaI	CYCGRG	1 cut(s)	279
BaeGI	GKGCMC	1 cut(s)	824
BanI	GGYRCC	1 cut(s)	4
BanII	GRGCYC	1 cut(s)	408
BbsI	GAAGAC	2 cut(s)	1068, 1594
Bbv12I	GWGCWC	1 cut(s)	1208
BbvI	GCAGC	7 cut(s)	526, 577, 865, 1449, 1457, 1633, 1811
BccI	CCATC	4 cut(s)	853, 953, 1038, 1861
BciT130I	CCWGG	2 cut(s)	354, 1886
BcnI	CCSGG	2 cut(s)	47, 127
BcoDI	GTCTC	4 cut(s)	551, 556, 1755, 2099
BfaI	CTAG	1 cut(s)	783
BfmI	CTRYAG	8 cut(s)	809, 1158, 1390, 1443, 1526, 1723, 1825, 2081
BfoI	RGCGCY	1 cut(s)	8
BfrI	CTTAAG	1 cut(s)	1997
BfuAI	ACCTGC	1 cut(s)	856
BisI	GCNGC	8 cut(s)	301, 540, 591, 879, 1446, 1463, 1647, 1825
BlsI	GCNGC	8 cut(s)	302, 541, 592, 880, 1447, 1464, 1648, 1826
Bme1390I	CCNGG	4 cut(s)	47, 127, 354, 1886
BmeT110I	CYCGRG	1 cut(s)	279
BmgT120I	GGNCC	2 cut(s)	356, 463
BmiI	GGNNCC	5 cut(s)	6, 407, 643, 1023, 1928
BmrFI	CCNGG	4 cut(s)	47, 127, 354, 1886
BmrI	ACTGGG	2 cut(s)	411, 734
BmsI	GCATC	8 cut(s)	104, 476, 577, 620, 766, 853, 2051, 2094
BmuI	ACTGGG	2 cut(s)	411, 734
BpiI	GAAGAC	2 cut(s)	1068, 1594
BpmI	CTGGAG	2 cut(s)	53, 1222
Bpu10I	CCTNAGC	1 cut(s)	1890
BpuEI	CTTGAG	3 cut(s)	1394, 1405, 1520
BpuMI	CCSGG	2 cut(s)	47, 127
BsaHI	GRCGYC	2 cut(s)	5, 1402
BsaI	GGTCTC	1 cut(s)	2099
BsaJI	CCNNGG	4 cut(s)	45, 481, 1017, 1884
BsaXI	ACNNNNNCTCC	2 cut(s)	1514, 1544
Bsc4I	CCNNNNNNNGG	3 cut(s)	132, 1747, 1891
Bse1I	ACTGG	7 cut(s)	406, 612, 740, 1327, 1333, 1928, 1930
Bse3DI	GCAATG	2 cut(s)	1448, 1847
BseBI	CCWGG	2 cut(s)	354, 1886
BseDI	CCNNGG	4 cut(s)	45, 481, 1017, 1884
BseGI	GGATG	9 cut(s)	491, 781, 864, 868, 964, 1049, 1498, 2042, 2109
BseLI	CCNNNNNNNGG	3 cut(s)	132, 1747, 1891
BseMI	GCAATG	2 cut(s)	1448, 1847
BseMII	CTCAG	3 cut(s)	843, 1098, 1904
BseNI	ACTGG	7 cut(s)	406, 612, 740, 1327, 1333, 1928, 1930
BseRI	GAGGAG	4 cut(s)	145, 148, 151, 1846
BseSI	GKGCMC	1 cut(s)	824
BseXI	GCAGC	7 cut(s)	526, 577, 865, 1449, 1457, 1633, 1811
BseYI	CCCAGC	4 cut(s)	303, 460, 1232, 2108
BsgI	GTGCAG	1 cut(s)	2153
BshFI	GGCC	3 cut(s)	357, 465, 2144
BshNI	GGYRCC	1 cut(s)	4
BsiHKAI	GWGCWC	1 cut(s)	1208
BsiHKCI	CYCGRG	1 cut(s)	279
BsiSI	CCGG	2 cut(s)	47, 127
BslFI	GGGAC	5 cut(s)	136, 1413, 1590, 1975, 1984
BslI	CCNNNNNNNGG	3 cut(s)	132, 1747, 1891
BsmAI	GTCTC	4 cut(s)	551, 556, 1755, 2099
BsmFI	GGGAC	5 cut(s)	136, 1413, 1590, 1975, 1984
BsnI	GGCC	3 cut(s)	357, 465, 2144
Bso31I	GGTCTC	1 cut(s)	2099
BsoBI	CYCGRG	1 cut(s)	279
Bsp1286I	GDGCHC	3 cut(s)	408, 824, 1208
Bsp1407I	TGTACA	3 cut(s)	386, 1697, 1878
Bsp19I	CCATGG	1 cut(s)	481
BspACI	CCGC	4 cut(s)	265, 301, 937, 1091
BspANI	GGCC	3 cut(s)	357, 465, 2144
BspCNI	CTCAG	3 cut(s)	844, 1099, 1903
BspHI	TCATGA	3 cut(s)	1507, 1680, 1918
BspLI	GGNNCC	5 cut(s)	6, 407, 643, 1023, 1928
BspMAI	CTGCAG	3 cut(s)	813, 1447, 1829
BspMI	ACCTGC	1 cut(s)	856
BspPI	GGATC	5 cut(s)	542, 730, 850, 1277, 1443
BspQI	GCTCTTC	1 cut(s)	401
BspT107I	GGYRCC	1 cut(s)	4
BspTI	CTTAAG	1 cut(s)	1997
BspTNI	GGTCTC	1 cut(s)	2099
BsrDI	GCAATG	2 cut(s)	1448, 1847
BsrGI	TGTACA	3 cut(s)	386, 1697, 1878
BsrI	ACTGG	7 cut(s)	406, 612, 740, 1327, 1333, 1928, 1930
BssECI	CCNNGG	4 cut(s)	45, 481, 1017, 1884
BssNI	GRCGYC	2 cut(s)	5, 1402
BssT1I	CCWWGG	1 cut(s)	481
Bst2UI	CCWGG	2 cut(s)	354, 1886
Bst4CI	ACNGT	8 cut(s)	567, 623, 1067, 1210, 1316, 1367, 1489, 1530
Bst6I	CTCTTC	1 cut(s)	401
BstACI	GRCGYC	2 cut(s)	5, 1402
BstAFI	CTTAAG	1 cut(s)	1997
BstAPI	GCANNNNNTGC	1 cut(s)	1824
BstAUI	TGTACA	3 cut(s)	386, 1697, 1878
BstC8I	GCNNGC	2 cut(s)	373, 1101
BstDEI	CTNAG	4 cut(s)	525, 852, 1107, 1890
BstDSI	CCRYGG	2 cut(s)	481, 1017
BstENI	CCTNNNNNAGG	1 cut(s)	1889
BstF5I	GGATG	9 cut(s)	491, 781, 864, 868, 964, 1049, 1498, 2042, 2109
BstH2I	RGCGCY	1 cut(s)	8
BstHHI	GCGC	1 cut(s)	7
BstMAI	GTCTC	4 cut(s)	551, 556, 1755, 2099
BstMWI	GCNNNNNNNGC	4 cut(s)	1410, 1459, 1824, 1858
BstNI	CCWGG	2 cut(s)	354, 1886
BstNSI	RCATGY	1 cut(s)	1002
BstSCI	CCNGG	4 cut(s)	45, 125, 352, 1884
BstSFI	CTRYAG	8 cut(s)	809, 1158, 1390, 1443, 1526, 1723, 1825, 2081
BstSLI	GKGCMC	1 cut(s)	824
BstV1I	GCAGC	7 cut(s)	526, 577, 865, 1449, 1457, 1633, 1811
BstV2I	GAAGAC	2 cut(s)	1068, 1594
BstX2I	RGATCY	2 cut(s)	735, 1435
BstXI	CCANNNNNNTGG	1 cut(s)	424
BstYI	RGATCY	2 cut(s)	735, 1435
BsuRI	GGCC	3 cut(s)	357, 465, 2144
BtgI	CCRYGG	2 cut(s)	481, 1017
BtsCI	GGATG	9 cut(s)	491, 781, 864, 868, 964, 1049, 1498, 2042, 2109
BtsI	GCAGTG	2 cut(s)	899, 1856
BtsIMutI	CAGTG	5 cut(s)	399, 899, 1206, 1363, 1856
BveI	ACCTGC	1 cut(s)	856
Cac8I	GCNNGC	2 cut(s)	373, 1101
CaiI	CAGNNNCTG	1 cut(s)	1824
CciI	TCATGA	3 cut(s)	1507, 1680, 1918
CfoI	GCGC	1 cut(s)	7
Cfr13I	GGNCC	2 cut(s)	356, 463
CseI	GACGC	1 cut(s)	1410
Csp6I	GTAC	8 cut(s)	387, 619, 806, 963, 1652, 1698, 1879, 1957
CviQI	GTAC	8 cut(s)	387, 619, 806, 963, 1652, 1698, 1879, 1957
DdeI	CTNAG	4 cut(s)	525, 852, 1107, 1890
DinI	GGCGCC	1 cut(s)	6
DraI	TTTAAA	1 cut(s)	1939
Eam1104I	CTCTTC	1 cut(s)	401
EarI	CTCTTC	1 cut(s)	401
Eco130I	CCWWGG	1 cut(s)	481
Eco24I	GRGCYC	1 cut(s)	408
Eco31I	GGTCTC	1 cut(s)	2099
Eco32I	GATATC	1 cut(s)	1581
Eco57I	CTGAAG	1 cut(s)	1170
Eco88I	CYCGRG	1 cut(s)	279
EcoNI	CCTNNNNNAGG	1 cut(s)	1889
EcoRII	CCWGG	2 cut(s)	352, 1884
EcoRV	GATATC	1 cut(s)	1581
EcoT14I	CCWWGG	1 cut(s)	481
EcoT38I	GRGCYC	1 cut(s)	408
EgeI	GGCGCC	1 cut(s)	6
EheI	GGCGCC	1 cut(s)	6
ErhI	CCWWGG	1 cut(s)	481
FalI	AAGNNNNNCTT	2 cut(s)	1773, 1805
FaqI	GGGAC	5 cut(s)	136, 1413, 1590, 1975, 1984
FblI	GTMKAC	2 cut(s)	578, 1561
Fnu4HI	GCNGC	8 cut(s)	301, 540, 591, 879, 1446, 1463, 1647, 1825
FokI	GGATG	9 cut(s)	498, 788, 871, 875, 971, 1056, 1505, 2029, 2116
FriOI	GRGCYC	1 cut(s)	408
Fsp4HI	GCNGC	8 cut(s)	301, 540, 591, 879, 1446, 1463, 1647, 1825
FspBI	CTAG	1 cut(s)	783
GlaI	GCGC	1 cut(s)	6
GluI	GCNGC	8 cut(s)	301, 540, 591, 879, 1446, 1463, 1647, 1825
GsaI	CCCAGC	4 cut(s)	307, 464, 1236, 2112
GsuI	CTGGAG	2 cut(s)	53, 1222
HaeII	RGCGCY	1 cut(s)	8
HaeIII	GGCC	3 cut(s)	357, 465, 2144
HapII	CCGG	2 cut(s)	47, 127
HgaI	GACGC	1 cut(s)	1410
HhaI	GCGC	1 cut(s)	7
Hin1I	GRCGYC	2 cut(s)	5, 1402
Hin6I	GCGC	1 cut(s)	5
HinP1I	GCGC	1 cut(s)	5
HincII	GTYRAC	1 cut(s)	1182
HindII	GTYRAC	1 cut(s)	1182
HindIII	AAGCTT	3 cut(s)	213, 1030, 1097
HpaII	CCGG	2 cut(s)	47, 127
HphI	GGTGA	4 cut(s)	41, 406, 837, 1631
Hpy166II	GTNNAC	6 cut(s)	389, 579, 1182, 1562, 1698, 1881
Hpy188I	TCNGA	8 cut(s)	100, 187, 700, 1080, 1108, 1312, 2026, 2103
Hpy8I	GTNNAC	6 cut(s)	389, 579, 1182, 1562, 1698, 1881
Hpy99I	CGWCG	3 cut(s)	170, 173, 2124
HpyAV	CCTTC	8 cut(s)	18, 92, 328, 419, 520, 1544, 1567, 1751
HpyCH4III	ACNGT	8 cut(s)	567, 623, 1067, 1210, 1316, 1367, 1489, 1530
HpyCH4IV	ACGT	3 cut(s)	258, 1868, 2119
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1410, 1459, 1824, 1858
HpyF3I	CTNAG	4 cut(s)	525, 852, 1107, 1890
HpySE526I	ACGT	3 cut(s)	258, 1868, 2119
Hsp92I	GRCGYC	2 cut(s)	5, 1402
HspAI	GCGC	1 cut(s)	5
KasI	GGCGCC	1 cut(s)	4
LguI	GCTCTTC	1 cut(s)	401
LmnI	GCTCC	5 cut(s)	411, 1021, 1203, 1522, 1894
Lsp1109I	GCAGC	7 cut(s)	526, 577, 865, 1449, 1457, 1633, 1811
LweI	GCATC	8 cut(s)	104, 476, 577, 620, 766, 853, 2051, 2094
MaeI	CTAG	1 cut(s)	783
MaeII	ACGT	3 cut(s)	258, 1868, 2119
MaeIII	GTNAC	4 cut(s)	379, 1153, 1241, 1318
MflI	RGATCY	2 cut(s)	735, 1435
MhlI	GDGCHC	3 cut(s)	408, 824, 1208
MluCI	AATT	9 cut(s)	104, 108, 141, 237, 1187, 1415, 1541, 1713, 1755
Mly113I	GGCGCC	1 cut(s)	5
MlyI	GAGTC	2 cut(s)	1612, 1757
MmeI	TCCRAC	1 cut(s)	1454
MroXI	GAANNNNTTC	3 cut(s)	216, 944, 1740
MslI	CAYNNNNRTG	2 cut(s)	710, 2102
MspA1I	CMGCKG	1 cut(s)	303
MspCI	CTTAAG	1 cut(s)	1997
MspI	CCGG	2 cut(s)	47, 127
MspR9I	CCNGG	4 cut(s)	47, 127, 354, 1886
MvaI	CCWGG	2 cut(s)	354, 1886
MwoI	GCNNNNNNNGC	4 cut(s)	1410, 1459, 1824, 1858
NarI	GGCGCC	1 cut(s)	5
NciI	CCSGG	2 cut(s)	47, 127
NcoI	CCATGG	1 cut(s)	481
NlaIV	GGNNCC	5 cut(s)	6, 407, 643, 1023, 1928
NmuCI	GTSAC	1 cut(s)	1153
NspI	RCATGY	1 cut(s)	1002
PagI	TCATGA	3 cut(s)	1507, 1680, 1918
PaqCI	CACCTGC	1 cut(s)	856
PciSI	GCTCTTC	1 cut(s)	401
PdmI	GAANNNNTTC	3 cut(s)	216, 944, 1740
PfeI	GAWTC	8 cut(s)	35, 242, 314, 1129, 1504, 1622, 1777, 2021
PkrI	GCNGC	8 cut(s)	302, 541, 592, 880, 1447, 1464, 1648, 1826
PleI	GAGTC	2 cut(s)	1611, 1757
PluTI	GGCGCC	1 cut(s)	8
PpsI	GAGTC	2 cut(s)	1611, 1757
PshBI	ATTAAT	2 cut(s)	107, 1754
Psp6I	CCWGG	2 cut(s)	352, 1884
PspFI	CCCAGC	4 cut(s)	303, 460, 1232, 2108
PspGI	CCWGG	2 cut(s)	352, 1884
PspN4I	GGNNCC	5 cut(s)	6, 407, 643, 1023, 1928
PspPI	GGNCC	2 cut(s)	356, 463
PsrI	GAACNNNNNNTAC	2 cut(s)	1373, 1405
PstI	CTGCAG	3 cut(s)	813, 1447, 1829
PstNI	CAGNNNCTG	1 cut(s)	1824
PsuI	RGATCY	2 cut(s)	735, 1435
RsaI	GTAC	8 cut(s)	388, 620, 807, 964, 1653, 1699, 1880, 1958
RsaNI	GTAC	8 cut(s)	387, 619, 806, 963, 1652, 1698, 1879, 1957
RseI	CAYNNNNRTG	2 cut(s)	710, 2102
SapI	GCTCTTC	1 cut(s)	401
SatI	GCNGC	8 cut(s)	301, 540, 591, 879, 1446, 1463, 1647, 1825
Sau96I	GGNCC	2 cut(s)	356, 463
SchI	GAGTC	2 cut(s)	1612, 1757
ScrFI	CCNGG	4 cut(s)	47, 127, 354, 1886
SduI	GDGCHC	3 cut(s)	408, 824, 1208
SfaNI	GCATC	8 cut(s)	104, 476, 577, 620, 766, 853, 2051, 2094
SfcI	CTRYAG	8 cut(s)	809, 1158, 1390, 1443, 1526, 1723, 1825, 2081
SfoI	GGCGCC	1 cut(s)	6
SmiMI	CAYNNNNRTG	2 cut(s)	710, 2102
SmlI	CTYRAG	4 cut(s)	1373, 1384, 1499, 1997
SmoI	CTYRAG	4 cut(s)	1373, 1384, 1499, 1997
Sse9I	AATT	9 cut(s)	104, 108, 141, 237, 1187, 1415, 1541, 1713, 1755
SsiI	CCGC	4 cut(s)	265, 301, 937, 1091
SspDI	GGCGCC	1 cut(s)	4
SspI	AATATT	1 cut(s)	1536
SspMI	CTAG	1 cut(s)	783
StyD4I	CCNGG	4 cut(s)	45, 125, 352, 1884
StyI	CCWWGG	1 cut(s)	481
TaaI	ACNGT	8 cut(s)	567, 623, 1067, 1210, 1316, 1367, 1489, 1530
TaiI	ACGT	3 cut(s)	261, 1871, 2122
TaqI	TCGA	4 cut(s)	288, 446, 513, 1252
TaqII	GACCGA	1 cut(s)	179
TasI	AATT	9 cut(s)	104, 108, 141, 237, 1187, 1415, 1541, 1713, 1755
TatI	WGTACW	6 cut(s)	386, 805, 1651, 1697, 1878, 1956
TauI	GCSGC	1 cut(s)	303
TfiI	GAWTC	8 cut(s)	35, 242, 314, 1129, 1504, 1622, 1777, 2021
TscAI	CASTG	5 cut(s)	406, 899, 1213, 1370, 1863
TseFI	GTSAC	1 cut(s)	1153
TseI	GCWGC	7 cut(s)	539, 590, 878, 1445, 1462, 1646, 1824
Tsp45I	GTSAC	1 cut(s)	1153
TspGWI	ACGGA	2 cut(s)	1034, 1783
TspRI	CASTG	5 cut(s)	406, 899, 1213, 1370, 1863
Vha464I	CTTAAG	1 cut(s)	1997
VspI	ATTAAT	2 cut(s)	107, 1754
XagI	CCTNNNNNAGG	1 cut(s)	1889
XceI	RCATGY	1 cut(s)	1002
XmiI	GTMKAC	2 cut(s)	578, 1561
XmnI	GAANNNNTTC	3 cut(s)	216, 944, 1740
XspI	CTAG	1 cut(s)	783

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.