Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0003655

Physical Location & Seq

Genomic Coordinates Forward (+)

54577060 .. 54580467

Gene Structure 3408 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0450100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1596 bp

ATGAGGGTGAGACTGAGATTGAGAGAGCGAACTGAGAGAGCTTACGTGGAGAACCCGTGGGCTGGAAGACTGGAGGAGCAGTGGAGTGGAGGAGCGCCGCGCACCGAGGCCCGACGCCGGAGGCACGGTGATGAACTGAGACCGACGGCGAAGTTACCTTACCTGCTGAATAGAAGTGTGGGATTCTTGGTTGGATTAGTTATATATAAGTGCATGGTCGCTACAATTATTGTTACATTGGGATTACTATTCTTACAAGCAGCAGAAGGTAGAAGAGAGAAGATTGAGGATGTGGTTACGTACTCCGCCATTAACTGCCGGAAGCACAGAGCTCTTTTGACCGATTTTGGAGCCGTTGGAGATGGGAAAACGCTGAACACAAAGGCCTTCAAAGATGCAGTTGATAAACTAAGCCAGTATGCATCGGATGGTGGAGCACAGCTAATTGTGCCGCCCGGAAAATGGCTTACCGGGAGCTTTAATCTCACTAGTCACTTTACCCTTTTCCTCCATAAGGAAGCTGTTATTCTTGGGTCTCAGGATGAATCAGAATGGCCTCTTGTTCCAGTTCTGCCTTCATACGGGAGAGGCAGAGACGCCCCTGGTGGAAGGCGTAGCAGTCTCGTCTTTGGAAGCAACCTCACTGATGTCGTAATTACTGGTAACAATGGCACCATTGATGGACAAGGTGTTCCTTGGTGGGACAAGTTCAAAAAGGGTCTTTTGAATGCCACCAGACCATACTTGATTGAGATTATGTTCTCTAATCAGATCCAAATCTCTAATCTCACTTTGACCAATTCTCCATCTTGGCATGTCCATCCCATTTACTGCAGCAACATAACAATCCAAAGCCTCACTATCCTTGCCCCAGTTAACGTTCCCAACACAGATGGGATTAACCCCGATTCATGTTCACAAACTCGTATTGAAGACTGTTACATAGTCTCGGGGGATGACTGCATTGCAGTGAAGAGTGGCTGGGATCAGTATGGAATCAAATTCGGCATGCCAACCGAGCATCTTGTTATCAGGAGGCTCACCTGCATTTCACCTAAAAGTGCTACCGTTGCTCTAGGCAGTGAAATGTCCGGTGGAATCAGAGATGTTAGAGTTGAGGATGTCACAGCCATTAACACTGAATCTAGTATTAGGATCAAAACAGCTGAAGGGAGAGGGGCTTATGTCAAAGACATCTTTGTACGACGATTAACATTGAACACTATGAAGTACCTTTTTTGGATATCAGGCGCATATGGTTCGCATCCAGATGAGGGATTTGATCCAAAGGCACTTCCTGTGATTCTAAACATCAACTACAGAGATATTGTCGCTGAGAATGTTACCAGGCCAGCACAGTTGGATGGACTTGCTAACGACCCTTTCAAGGGAATTTGCATTTCTAATGTGAGTATCTCATTGACTGCAAATCCTAAGGAGCTGTTGTGGAATTGTACTGATGTTGAGGGCATTACAAGCAATGTGACTCCAAAGGCTTGCGATTTGTTGCCCGAGCAGCAAAACCCAGTAGATTGTGCTTTCCCTGAGGATAAGATAGCCATTGAGGATGTTAAGTTGACGAGTTGTTCTGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000781 GO:0000784 GO:0000808 GO:0003674 GO:0003676 GO:0003677 GO:0003688 GO:0003690 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005656 GO:0005664 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006267 GO:0006270 GO:0006725 GO:0006807 GO:0007049 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009743 GO:0009744 GO:0009791 GO:0009987 GO:0010033 GO:0016043 GO:0022402 GO:0022607 GO:0022622 GO:0031261 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0032993 GO:0033260 GO:0034285 GO:0034622 GO:0034641 GO:0034645 GO:0036387 GO:0036388 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0044786 GO:0046483 GO:0048364 GO:0048527 GO:0048528 GO:0048731 GO:0048856 GO:0050896 GO:0065003 GO:0065004 GO:0070013 GO:0071704 GO:0071824 GO:0071840 GO:0090304 GO:0090696 GO:0097159 GO:0098687 GO:0099402 GO:1901360 GO:1901363 GO:1901576 GO:1901700 GO:1902299 GO:1990837

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 ko04113 map04110 map04111 map04113

Pfam Domains

Protein Families

ORC3_N

Protein Analysis

531

Amino Acids

58.58

Weight (kDa)

7.51

Isoelectric Point (pI)

44.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_28	PF00295	208 - 489	9.6e-38	Glycosyl hydrolases family 28

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0003655)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G16690 AT5G16690
fragaria_vesca	FvH4_7g34260 FvH4_7g34260 FvH4_7g34260 FvH4_7g34260 FvH4_7g34260 FvH4_7g34260 FvH4_7g34260 FvH4_7g34260 FvH4_7g34260 FvH4_7g34260 FvH4_7g34260 FvH4_7g34260
malus_domestica	MD01G1239300.v1.1 MD07G1032700.v1.1
prunus_persica	Prupe.2G329300_v2.0.a1
pyrus_communis	pycom07g02310
rosa_chinensis	RchiOBHm_Chr1g0384611 RchiOBHm_Chr6g0290011
rosa_laevigata	RLG00000000745 RLG00000026027
rosa_multiflora	Rmu_co8125142.1_g000001 Rmu_co8285713.1_g000001 Rmu_sc0012136.1_g000030
rosa_roxburghii	Rroxscaffold_4G00276520
rosa_rugosa	Rorug01G0450000 Rorug01G0450100
rosa_samantha	Rh1AG348300 Rh1AG474600 Rh1BG432700 Rh1CG445900 Rh1DG465300 Rh5DG247400
rosa_wichuraiana	Rw1G039800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1052
Acc36I	ACCTGC	2 cut(s)	171, 1052
AccB1I	GGYRCC	1 cut(s)	671
AccII	CGCG	1 cut(s)	100
AciI	CCGC	3 cut(s)	98, 306, 452
AclI	AACGTT	1 cut(s)	879
AclWI	GGATC	4 cut(s)	766, 993, 1163, 1277
AcsI	RAATTY	2 cut(s)	1001, 1392
AcuI	CTGAAG	1 cut(s)	1188
AcyI	GRCGYC	2 cut(s)	115, 597
AfaI	GTAC	4 cut(s)	302, 1203, 1232, 1456
AfiI	CCNNNNNNNGG	8 cut(s)	62, 117, 462, 514, 581, 1274, 1387, 1388
AgsI	TTSAA	6 cut(s)	391, 712, 727, 932, 1219, 1387
AhlI	ACTAGT	1 cut(s)	488
AjnI	CCWGG	2 cut(s)	601, 1346
AloI	GAACNNNNNNTCC	2 cut(s)	675, 707
AluBI	AGCT	7 cut(s)	41, 332, 442, 477, 521, 1166, 1441
AluI	AGCT	7 cut(s)	41, 332, 442, 477, 521, 1166, 1441
Alw21I	GWGCWC	2 cut(s)	334, 439
Alw26I	GTCTC	6 cut(s)	4, 133, 540, 588, 626, 952
AlwI	GGATC	4 cut(s)	766, 993, 1163, 1277
Ama87I	CYCGRG	2 cut(s)	949, 1511
AoxI	GGCC	4 cut(s)	108, 384, 554, 1349
ApeKI	GCWGC	3 cut(s)	260, 834, 1516
ApoI	RAATTY	2 cut(s)	1001, 1392
AspLEI	GCGC	3 cut(s)	97, 102, 1253
AspS9I	GGNCC	1 cut(s)	109
AsuC2I	CCSGG	2 cut(s)	456, 472
AsuHPI	GGTGA	4 cut(s)	19, 140, 1033, 1044
AvaI	CYCGRG	2 cut(s)	949, 1511
AxyI	CCTNAGG	2 cut(s)	1434, 1545
BanI	GGYRCC	1 cut(s)	671
BanII	GRGCYC	1 cut(s)	334
BarI	GAAGNNNNNNTAC	2 cut(s)	143, 175
BbsI	GAAGAC	2 cut(s)	73, 939
Bbv12I	GWGCWC	2 cut(s)	334, 439
BbvI	GCAGC	3 cut(s)	272, 846, 1528
BccI	CCATC	7 cut(s)	356, 422, 674, 814, 828, 887, 1358
BceAI	ACGGC	2 cut(s)	162, 338
BcgI	CGANNNNNNTGC	2 cut(s)	1242, 1276
BciT130I	CCWGG	2 cut(s)	603, 1348
BcnI	CCSGG	2 cut(s)	456, 472
BcoDI	GTCTC	6 cut(s)	4, 133, 540, 588, 626, 952
BcuI	ACTAGT	1 cut(s)	488
BfaI	CTAG	3 cut(s)	489, 1076, 1146
BfmI	CTRYAG	2 cut(s)	832, 1318
BfoI	RGCGCY	1 cut(s)	98
BfuAI	ACCTGC	2 cut(s)	171, 1052
BisI	GCNGC	5 cut(s)	98, 261, 452, 835, 1517
BlsI	GCNGC	5 cut(s)	99, 262, 453, 836, 1518
Bme1390I	CCNGG	4 cut(s)	456, 472, 603, 1348
BmeT110I	CYCGRG	2 cut(s)	949, 1511
BmgT120I	GGNCC	1 cut(s)	109
BmiI	GGNNCC	2 cut(s)	352, 673
BmrFI	CCNGG	4 cut(s)	456, 472, 603, 1348
BmrI	ACTGGG	2 cut(s)	866, 1520
BmsI	GCATC	4 cut(s)	385, 431, 1030, 1273
BmuI	ACTGGG	2 cut(s)	866, 1520
BpiI	GAAGAC	2 cut(s)	73, 939
BpmI	CTGGAG	1 cut(s)	92
BpuMI	CCSGG	2 cut(s)	456, 472
BsaAI	YACGTR	2 cut(s)	46, 300
BsaBI	GATNNNNATC	1 cut(s)	776
BsaHI	GRCGYC	2 cut(s)	115, 597
BsaI	GGTCTC	2 cut(s)	133, 540
BsaJI	CCNNGG	4 cut(s)	56, 105, 601, 695
BsaWI	WCCGGW	1 cut(s)	1091
Bsc4I	CCNNNNNNNGG	8 cut(s)	62, 117, 462, 514, 581, 1274, 1387, 1388
Bse1I	ACTGG	6 cut(s)	75, 415, 566, 664, 872, 1526
Bse21I	CCTNAGG	2 cut(s)	1434, 1545
Bse3DI	GCAATG	2 cut(s)	963, 1486
Bse8I	GATNNNNATC	1 cut(s)	776
BseBI	CCWGG	2 cut(s)	603, 1348
BseDI	CCNNGG	4 cut(s)	56, 105, 601, 695
BseGI	GGATG	9 cut(s)	295, 433, 547, 820, 961, 1126, 1264, 1369, 1573
BseJI	GATNNNNATC	1 cut(s)	776
BseLI	CCNNNNNNNGG	8 cut(s)	62, 117, 462, 514, 581, 1274, 1387, 1388
BseMI	GCAATG	2 cut(s)	963, 1486
BseMII	CTCAG	6 cut(s)	5, 24, 128, 551, 1326, 1536
BseNI	ACTGG	6 cut(s)	75, 415, 566, 664, 872, 1526
BseRI	GAGGAG	2 cut(s)	89, 105
BseXI	GCAGC	3 cut(s)	272, 846, 1528
BseYI	CCCAGC	1 cut(s)	981
Bsh1236I	CGCG	1 cut(s)	100
BshFI	GGCC	4 cut(s)	110, 386, 556, 1351
BshNI	GGYRCC	1 cut(s)	671
BsiHKAI	GWGCWC	2 cut(s)	334, 439
BsiHKCI	CYCGRG	2 cut(s)	949, 1511
BsiSI	CCGG	5 cut(s)	118, 319, 456, 471, 1092
BslFI	GGGAC	1 cut(s)	716
BslI	CCNNNNNNNGG	8 cut(s)	62, 117, 462, 514, 581, 1274, 1387, 1388
BsmAI	GTCTC	6 cut(s)	4, 133, 540, 588, 626, 952
BsmBI	CGTCTC	1 cut(s)	588
BsmFI	GGGAC	1 cut(s)	716
BsmI	GAATGC	1 cut(s)	733
BsnI	GGCC	4 cut(s)	110, 386, 556, 1351
Bso31I	GGTCTC	2 cut(s)	133, 540
BsoBI	CYCGRG	2 cut(s)	949, 1511
Bsp1286I	GDGCHC	2 cut(s)	334, 439
Bsp143I	GATC	4 cut(s)	771, 985, 1155, 1282
BspACI	CCGC	3 cut(s)	98, 306, 452
BspANI	GGCC	4 cut(s)	110, 386, 556, 1351
BspCNI	CTCAG	6 cut(s)	6, 25, 129, 550, 1327, 1537
BspFNI	CGCG	1 cut(s)	100
BspLI	GGNNCC	2 cut(s)	352, 673
BspMAI	CTGCAG	1 cut(s)	836
BspMI	ACCTGC	2 cut(s)	171, 1052
BspPI	GGATC	4 cut(s)	766, 993, 1163, 1277
BspT107I	GGYRCC	1 cut(s)	671
BspTNI	GGTCTC	2 cut(s)	133, 540
BsrDI	GCAATG	2 cut(s)	963, 1486
BsrI	ACTGG	6 cut(s)	75, 415, 566, 664, 872, 1526
BssECI	CCNNGG	4 cut(s)	56, 105, 601, 695
BssMI	GATC	4 cut(s)	771, 985, 1155, 1282
BssNI	GRCGYC	2 cut(s)	115, 597
BssT1I	CCWWGG	1 cut(s)	695
Bst2UI	CCWGG	2 cut(s)	603, 1348
Bst4CI	ACNGT	4 cut(s)	128, 938, 1069, 1359
Bst6I	CTCTTC	2 cut(s)	268, 968
BstACI	GRCGYC	2 cut(s)	115, 597
BstBAI	YACGTR	2 cut(s)	46, 300
BstC8I	GCNNGC	3 cut(s)	1010, 1353, 1498
BstDEI	CTNAG	8 cut(s)	14, 33, 137, 410, 537, 1335, 1434, 1545
BstDSI	CCRYGG	1 cut(s)	56
BstENI	CCTNNNNNAGG	1 cut(s)	512
BstF5I	GGATG	9 cut(s)	295, 433, 547, 820, 961, 1126, 1264, 1369, 1573
BstFNI	CGCG	1 cut(s)	100
BstH2I	RGCGCY	1 cut(s)	98
BstHHI	GCGC	3 cut(s)	97, 102, 1253
BstKTI	GATC	4 cut(s)	774, 988, 1158, 1285
BstMAI	GTCTC	6 cut(s)	4, 133, 540, 588, 626, 952
BstMBI	GATC	4 cut(s)	771, 985, 1155, 1282
BstMWI	GCNNNNNNNGC	5 cut(s)	448, 1018, 1070, 1476, 1516
BstNI	CCWGG	2 cut(s)	603, 1348
BstNSI	RCATGY	2 cut(s)	818, 1012
BstSCI	CCNGG	4 cut(s)	454, 470, 601, 1346
BstSFI	CTRYAG	2 cut(s)	832, 1318
BstSNI	TACGTA	1 cut(s)	300
BstUI	CGCG	1 cut(s)	100
BstV1I	GCAGC	3 cut(s)	272, 846, 1528
BstV2I	GAAGAC	2 cut(s)	73, 939
BstX2I	RGATCY	1 cut(s)	771
BstYI	RGATCY	1 cut(s)	771
Bsu36I	CCTNAGG	2 cut(s)	1434, 1545
BsuRI	GGCC	4 cut(s)	110, 386, 556, 1351
BtgI	CCRYGG	1 cut(s)	56
BtsCI	GGATG	9 cut(s)	295, 433, 547, 820, 961, 1126, 1264, 1369, 1573
BtsI	GCAGTG	3 cut(s)	86, 975, 1087
BtsIMutI	CAGTG	5 cut(s)	86, 642, 975, 1087, 1137
BveI	ACCTGC	2 cut(s)	171, 1052
Cac8I	GCNNGC	3 cut(s)	1010, 1353, 1498
CfoI	GCGC	3 cut(s)	97, 102, 1253
Cfr13I	GGNCC	1 cut(s)	109
CseI	GACGC	2 cut(s)	123, 605
Csp6I	GTAC	4 cut(s)	301, 1202, 1231, 1455
CviAII	CATG	4 cut(s)	214, 815, 912, 1009
CviQI	GTAC	4 cut(s)	301, 1202, 1231, 1455
DdeI	CTNAG	8 cut(s)	14, 33, 137, 410, 537, 1335, 1434, 1545
DpnI	GATC	4 cut(s)	773, 987, 1157, 1284
DpnII	GATC	4 cut(s)	771, 985, 1155, 1282
Eam1104I	CTCTTC	2 cut(s)	268, 968
EarI	CTCTTC	2 cut(s)	268, 968
EciI	GGCGGA	1 cut(s)	295
Ecl136II	GAGCTC	1 cut(s)	332
Eco105I	TACGTA	1 cut(s)	300
Eco130I	CCWWGG	1 cut(s)	695
Eco147I	AGGCCT	1 cut(s)	386
Eco24I	GRGCYC	1 cut(s)	334
Eco31I	GGTCTC	2 cut(s)	133, 540
Eco32I	GATATC	1 cut(s)	1245
Eco53kI	GAGCTC	1 cut(s)	332
Eco57I	CTGAAG	1 cut(s)	1188
Eco81I	CCTNAGG	2 cut(s)	1434, 1545
Eco88I	CYCGRG	2 cut(s)	949, 1511
EcoICRI	GAGCTC	1 cut(s)	332
EcoNI	CCTNNNNNAGG	1 cut(s)	512
EcoRII	CCWGG	2 cut(s)	601, 1346
EcoRV	GATATC	1 cut(s)	1245
EcoT14I	CCWWGG	1 cut(s)	695
EcoT22I	ATGCAT	1 cut(s)	424
EcoT38I	GRGCYC	1 cut(s)	334
ErhI	CCWWGG	1 cut(s)	695
Esp3I	CGTCTC	1 cut(s)	588
FaeI	CATG	4 cut(s)	217, 818, 915, 1012
FaqI	GGGAC	1 cut(s)	716
FatI	CATG	4 cut(s)	213, 814, 911, 1008
FauNDI	CATATG	1 cut(s)	1255
Fnu4HI	GCNGC	5 cut(s)	98, 261, 452, 835, 1517
FokI	GGATG	9 cut(s)	302, 440, 554, 807, 968, 1133, 1251, 1376, 1580
FriOI	GRGCYC	1 cut(s)	334
Fsp4HI	GCNGC	5 cut(s)	98, 261, 452, 835, 1517
FspBI	CTAG	3 cut(s)	489, 1076, 1146
GlaI	GCGC	3 cut(s)	96, 101, 1252
GluI	GCNGC	5 cut(s)	98, 261, 452, 835, 1517
GsaI	CCCAGC	1 cut(s)	985
GsuI	CTGGAG	1 cut(s)	92
HaeII	RGCGCY	1 cut(s)	98
HaeIII	GGCC	4 cut(s)	110, 386, 556, 1351
HapII	CCGG	5 cut(s)	118, 319, 456, 471, 1092
HgaI	GACGC	2 cut(s)	123, 605
HhaI	GCGC	3 cut(s)	97, 102, 1253
Hin1I	GRCGYC	2 cut(s)	115, 597
Hin1II	CATG	4 cut(s)	217, 818, 915, 1012
Hin6I	GCGC	3 cut(s)	95, 100, 1251
HinP1I	GCGC	3 cut(s)	95, 100, 1251
HincII	GTYRAC	2 cut(s)	877, 1578
HindII	GTYRAC	2 cut(s)	877, 1578
HinfI	GANTC	8 cut(s)	183, 545, 908, 996, 1098, 1142, 1303, 1486
HpaI	GTTAAC	1 cut(s)	877
HpaII	CCGG	5 cut(s)	118, 319, 456, 471, 1092
HphI	GGTGA	4 cut(s)	19, 140, 1033, 1044
Hpy166II	GTNNAC	3 cut(s)	877, 917, 1578
Hpy188I	TCNGA	4 cut(s)	427, 550, 771, 1103
Hpy188III	TCNNGA	3 cut(s)	539, 1033, 1268
Hpy8I	GTNNAC	3 cut(s)	877, 917, 1578
Hpy99I	CGWCG	3 cut(s)	117, 148, 1209
HpyAV	CCTTC	5 cut(s)	260, 397, 585, 603, 1163
HpyCH4III	ACNGT	4 cut(s)	128, 938, 1069, 1359
HpyCH4IV	ACGT	3 cut(s)	45, 299, 879
HpyCH4V	TGCA	9 cut(s)	213, 398, 422, 834, 963, 968, 1047, 1398, 1427
HpyF10VI	GCNNNNNNNGC	5 cut(s)	448, 1018, 1070, 1476, 1516
HpyF3I	CTNAG	8 cut(s)	14, 33, 137, 410, 537, 1335, 1434, 1545
HpySE526I	ACGT	3 cut(s)	45, 299, 879
Hsp92I	GRCGYC	2 cut(s)	115, 597
Hsp92II	CATG	4 cut(s)	217, 818, 915, 1012
HspAI	GCGC	3 cut(s)	95, 100, 1251
KspAI	GTTAAC	1 cut(s)	877
Kzo9I	GATC	4 cut(s)	771, 985, 1155, 1282
LmnI	GCTCC	6 cut(s)	76, 92, 350, 434, 474, 1438
Lsp1109I	GCAGC	3 cut(s)	272, 846, 1528
LweI	GCATC	4 cut(s)	385, 431, 1030, 1273
MaeI	CTAG	3 cut(s)	489, 1076, 1146
MaeII	ACGT	3 cut(s)	45, 299, 879
MaeIII	GTNAC	9 cut(s)	153, 232, 295, 491, 662, 938, 1123, 1342, 1483
MalI	GATC	4 cut(s)	773, 987, 1157, 1284
MboI	GATC	4 cut(s)	771, 985, 1155, 1282
MboII	GAAGA	5 cut(s)	78, 285, 292, 944, 985
MflI	RGATCY	1 cut(s)	771
MhlI	GDGCHC	2 cut(s)	334, 439
MluCI	AATT	7 cut(s)	225, 444, 654, 799, 1001, 1392, 1450
MlyI	GAGTC	1 cut(s)	1480
MmeI	TCCRAC	3 cut(s)	172, 337, 1341
Mph1103I	ATGCAT	1 cut(s)	424
MseI	TTAA	8 cut(s)	312, 480, 876, 900, 1134, 1211, 1572, 1594
MslI	CAYNNNNRTG	3 cut(s)	129, 968, 1269
MspA1I	CMGCKG	1 cut(s)	1166
MspI	CCGG	5 cut(s)	118, 319, 456, 471, 1092
MspR9I	CCNGG	4 cut(s)	456, 472, 603, 1348
MteI	GCGCNGCGC	1 cut(s)	98
Mva1269I	GAATGC	1 cut(s)	733
MvaI	CCWGG	2 cut(s)	603, 1348
MvnI	CGCG	1 cut(s)	100
MwoI	GCNNNNNNNGC	5 cut(s)	448, 1018, 1070, 1476, 1516
NciI	CCSGG	2 cut(s)	456, 472
NdeI	CATATG	1 cut(s)	1255
NdeII	GATC	4 cut(s)	771, 985, 1155, 1282
NlaIII	CATG	4 cut(s)	217, 818, 915, 1012
NlaIV	GGNNCC	2 cut(s)	352, 673
NmuCI	GTSAC	3 cut(s)	491, 1123, 1483
NsiI	ATGCAT	1 cut(s)	424
NspI	RCATGY	2 cut(s)	818, 1012
PaeI	GCATGC	1 cut(s)	1012
PaqCI	CACCTGC	1 cut(s)	1052
PceI	AGGCCT	1 cut(s)	386
PctI	GAATGC	1 cut(s)	733
PfeI	GAWTC	7 cut(s)	183, 545, 908, 996, 1098, 1142, 1303
PkrI	GCNGC	5 cut(s)	99, 262, 453, 836, 1518
PleI	GAGTC	1 cut(s)	1480
PpsI	GAGTC	1 cut(s)	1480
Ppu21I	YACGTR	2 cut(s)	46, 300
Psp124BI	GAGCTC	1 cut(s)	334
Psp1406I	AACGTT	1 cut(s)	879
Psp6I	CCWGG	2 cut(s)	601, 1346
PspFI	CCCAGC	1 cut(s)	981
PspGI	CCWGG	2 cut(s)	601, 1346
PspN4I	GGNNCC	2 cut(s)	352, 673
PspPI	GGNCC	1 cut(s)	109
PstI	CTGCAG	1 cut(s)	836
PsuI	RGATCY	1 cut(s)	771
PvuII	CAGCTG	1 cut(s)	1166
RsaI	GTAC	4 cut(s)	302, 1203, 1232, 1456
RsaNI	GTAC	4 cut(s)	301, 1202, 1231, 1455
RseI	CAYNNNNRTG	3 cut(s)	129, 968, 1269
SacI	GAGCTC	1 cut(s)	334
SaqAI	TTAA	8 cut(s)	312, 480, 876, 900, 1134, 1211, 1572, 1594
SatI	GCNGC	5 cut(s)	98, 261, 452, 835, 1517
Sau3AI	GATC	4 cut(s)	771, 985, 1155, 1282
Sau96I	GGNCC	1 cut(s)	109
SchI	GAGTC	1 cut(s)	1480
ScrFI	CCNGG	4 cut(s)	456, 472, 603, 1348
SduI	GDGCHC	2 cut(s)	334, 439
SfaNI	GCATC	4 cut(s)	385, 431, 1030, 1273
SfcI	CTRYAG	2 cut(s)	832, 1318
SmiMI	CAYNNNNRTG	3 cut(s)	129, 968, 1269
SnaBI	TACGTA	1 cut(s)	300
SpeI	ACTAGT	1 cut(s)	488
SphI	GCATGC	1 cut(s)	1012
Sse9I	AATT	7 cut(s)	225, 444, 654, 799, 1001, 1392, 1450
SseBI	AGGCCT	1 cut(s)	386
SsiI	CCGC	3 cut(s)	98, 306, 452
SspMI	CTAG	3 cut(s)	489, 1076, 1146
SstI	GAGCTC	1 cut(s)	334
StuI	AGGCCT	1 cut(s)	386
StyD4I	CCNGG	4 cut(s)	454, 470, 601, 1346
StyI	CCWWGG	1 cut(s)	695
TaaI	ACNGT	4 cut(s)	128, 938, 1069, 1359
TaiI	ACGT	3 cut(s)	48, 302, 882
TaqII	GACCGA	2 cut(s)	157, 356
TasI	AATT	7 cut(s)	225, 444, 654, 799, 1001, 1392, 1450
TatI	WGTACW	1 cut(s)	1454
TauI	GCSGC	2 cut(s)	100, 454
TfiI	GAWTC	7 cut(s)	183, 545, 908, 996, 1098, 1142, 1303
Tru1I	TTAA	8 cut(s)	312, 480, 876, 900, 1134, 1211, 1572, 1594
Tru9I	TTAA	8 cut(s)	312, 480, 876, 900, 1134, 1211, 1572, 1594
TscAI	CASTG	5 cut(s)	86, 649, 975, 1087, 1144
TseFI	GTSAC	3 cut(s)	491, 1123, 1483
TseI	GCWGC	3 cut(s)	260, 834, 1516
Tsp45I	GTSAC	3 cut(s)	491, 1123, 1483
TspDTI	ATGAA	5 cut(s)	147, 558, 567, 900, 1241
TspRI	CASTG	5 cut(s)	86, 649, 975, 1087, 1144
XagI	CCTNNNNNAGG	1 cut(s)	512
XapI	RAATTY	2 cut(s)	1001, 1392
XceI	RCATGY	2 cut(s)	818, 1012
XspI	CTAG	3 cut(s)	489, 1076, 1146
Zsp2I	ATGCAT	1 cut(s)	424

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.