Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0003655

Physical Location & Seq

Genomic Coordinates Reverse (-)

94879 .. 101273

Gene Structure 6395 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00276520.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2154 bp

ATGGCGCCTTCCTCATCTGCAAGTTCGGGTGAAGATTCATCAACCCCGGACACCACCCAAAGCCACCTCCAGCATAGTTTCCTTCTTCACAAAGCATCTGATAAATTAATTTCAAGTGGCAAAGCCCGGAGGAGGAGGATTGATCTGTCCCCCACAAAGACCGACGACGACAAGAAGCAATTCGATGATGAACGCTGGTTGAGAATGGAAGCTTTTCAGTTAGTTTGGTCAAGAATTGAATCCACTATCAACCATGTTCTGCGGAATATCAATGCTCGGGTTTTCGATCACATACGCCGCTGGGTCTGGGATTCCTTCAATGCTATCAAACCACTTGCCACCATTTCTCCTGGCCCTTTTCCTATTGTCAGCCAAGTTACCTGTACACAGCTCTTCACTGGGCTCCTTCTCACCAATAATATGGAGTTTGTTGATGATATTTCGACATTTCAAGAGCTGGGCCTCTGCTTGAAATCCCATGGATGCCATGTGGCTAACCTTTCCTCCTTCGACTTTTCATCCAAGAATGGGATCGCTGGCTGTCTCACAAGTTTATTGAGACAGTTTCTCATGTCTACTTTTGATGCTGCTGATATGTCCATACTGGCATCATGGTACAGTCGGCAAGGAAACTATGGTTCCCCTGTGGTTGTCATTATAGATGATATGGAACGATGTTGTGGTGCTGTCATGTCTGATTTCATTCTTATGTTGAGCGAATGGGTTGTGAAGATCCCAGTCATCTTAATAATGGGCGTTGCGACAACTCTGGATGCCCCTAGAAAAATACTTTCTTCAAATGTACTGCAGAAGTTGTGCCCTTGCAGCTTCAAGTTGGGATCACCTGCTGAGAGGATGGATGCAGTTGTTGAGGCTGCTCTTGTGAGGCAGTGTTCTGGTTTTGCTGTTGGTCATAAGGTGGCTGTTTTTCTGCGGAACTACTTCTTAAATCAGGATGGTACATTGACATCTTTTGTTAGAGCATTGAAGATAGCATGTGTTCAACATTTTTCCACGGAGCCTTTAAGCTTCCTGCTTGGATGGTTGCTTGTTAAAGAAGACAGTAAGGGAGTTCAGAGTGAGAAAGCGGTCAAGCTTGCTTCTGAGCTTTTATCTCTTGCAAGGAATCAAATAGCTGAACAAACTGAAGTCACTATAGTTCATAGTTTGACAGAGTTGGCGAAATTGCAGAAGCTCTGGAGCACCGTTGTTCTGTGCTTATATGAAGCTGGGAAGTGTAACAAAACTCGATTGATAGACTTATTTTGTGAGGCACTTGATCCAGATACTTACAACTTATTGGCTTCTGATGGTCTTACCGGAACTGGAAAAGGTTTTGTTCAATCTTTGTCAAGTGATCACTGTATGCTTGAGCAGAACTTGAGCTACAGAAAGGGACGCCTTATTTGCCAATTATTAGGTAGAGTGAGGGATCTTCCTGCAGCATTGCTTTGTCGGCTGCTGAATAGTTGGAAAAATCTCACTGTGGATGTTCTTGAGATTCATGACAAGGTAAAGGAGCTACAGTCAATATTAAAATTAGACGAAGGAAGTTGTAAACCAGATTTGAAGGAGATATCCAGAAGACATACATCTCGGAGTCCCTTAAAGATCGGTGAATCACAATCAATAAATGAAAAAGCCGCTATACTAATGGATTGCATGGTTAGGGATTTCATGAAGCCGATTGAGTGTACAGCTTTTCACGAAATTGTTTGCTATAGAAATGTTGAAAACCTTCAATCGGCATTAATTGGAGACTCACGGAAAATGATTCAAGTTGATCTTTTGGAGTTTCATAAAACCCTACAATGCAGTTGCTGCAGGAGGAGTGGCAACATACCATTGCCATCAATGCCTGATACGTCTATTATGTACACCCTGGCTCAGGAGCATGGCGATCTTATCAATCTTCATGACTGGTTCCAGTCTTTTAAAACCATTGTCATTCAGTACAGCAAAAAAGGGACAAGCAAACTGAAAAAGTCCCCACTTAAGAAAAGAAAGGAAAGGAATGAATCTGAAAACAAGAGTGAAGCATCCATTCAAGCCAGATTTTGCAGGTCAATCACAGAACTACAGATTACAGGTCTCATTCGGATGCCCAGCAAAAAACGTCGTGATTGTGTGCAGAGAGTGGCCTTTGGGCTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000781 GO:0000784 GO:0000808 GO:0003674 GO:0003676 GO:0003677 GO:0003688 GO:0003690 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005656 GO:0005664 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006267 GO:0006270 GO:0006725 GO:0006807 GO:0007049 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009743 GO:0009744 GO:0009791 GO:0009987 GO:0010033 GO:0016043 GO:0022402 GO:0022607 GO:0022622 GO:0031261 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0032993 GO:0033260 GO:0034285 GO:0034622 GO:0034641 GO:0034645 GO:0036387 GO:0036388 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0044786 GO:0046483 GO:0048364 GO:0048527 GO:0048528 GO:0048731 GO:0048856 GO:0050896 GO:0065003 GO:0065004 GO:0070013 GO:0071704 GO:0071824 GO:0071840 GO:0090304 GO:0090696 GO:0097159 GO:0098687 GO:0099402 GO:1901360 GO:1901363 GO:1901576 GO:1901700 GO:1902299 GO:1990837

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 ko04113 map04110 map04111 map04113

Pfam Domains

Protein Families

ORC3_N

Protein Analysis

717

Amino Acids

80.52

Weight (kDa)

8.75

Isoelectric Point (pI)

54.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ORC3_N	PF07034	35 - 345	6.1e-64	Origin recognition complex (ORC) subunit 3 N-terminus
WHD_ORC	PF18137	589 - 715	4.6e-28	Origin recognition complex winged helix C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003655)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G16690 AT5G16690
fragaria_vesca	FvH4_7g34260 FvH4_7g34260 FvH4_7g34260 FvH4_7g34260 FvH4_7g34260 FvH4_7g34260 FvH4_7g34260 FvH4_7g34260 FvH4_7g34260 FvH4_7g34260 FvH4_7g34260 FvH4_7g34260
malus_domestica	MD01G1239300.v1.1 MD07G1032700.v1.1
prunus_persica	Prupe.2G329300_v2.0.a1
pyrus_communis	pycom07g02310
rosa_chinensis	RchiOBHm_Chr1g0384611 RchiOBHm_Chr6g0290011
rosa_laevigata	RLG00000000745 RLG00000026027
rosa_multiflora	Rmu_co8125142.1_g000001 Rmu_co8285713.1_g000001 Rmu_sc0012136.1_g000030
rosa_roxburghii	Rroxscaffold_4G00276520
rosa_rugosa	Rorug01G0450000 Rorug01G0450100
rosa_samantha	Rh1AG348300 Rh1AG474600 Rh1BG432700 Rh1CG445900 Rh1DG465300 Rh5DG247400
rosa_wichuraiana	Rw1G039800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	853
Acc36I	ACCTGC	2 cut(s)	853, 2052
AccB1I	GGYRCC	1 cut(s)	4
AccI	GTMKAC	1 cut(s)	575
AciI	CCGC	5 cut(s)	262, 298, 934, 1088, 1644
AclWI	GGATC	5 cut(s)	539, 727, 847, 1274, 1440
AcuI	CTGAAG	1 cut(s)	1167
AcyI	GRCGYC	2 cut(s)	5, 1399
AfaI	GTAC	7 cut(s)	385, 617, 804, 961, 1696, 1877, 1955
AfiI	CCNNNNNNNGG	4 cut(s)	132, 528, 1744, 1888
AflII	CTTAAG	1 cut(s)	1994
AjnI	CCWGG	2 cut(s)	349, 1881
Alw21I	GWGCWC	1 cut(s)	1205
Alw26I	GTCTC	4 cut(s)	548, 553, 1752, 2096
AlwI	GGATC	5 cut(s)	539, 727, 847, 1274, 1440
AlwNI	CAGNNNCTG	1 cut(s)	1821
Ama87I	CYCGRG	1 cut(s)	276
AoxI	GGCC	3 cut(s)	352, 460, 2139
ApeKI	GCWGC	6 cut(s)	587, 825, 875, 1442, 1459, 1821
ArsI	GACNNNNNNTTYG	2 cut(s)	1389, 1421
AseI	ATTAAT	2 cut(s)	107, 1751
Asp700I	GAANNNNTTC	4 cut(s)	179, 213, 941, 1737
AspLEI	GCGC	1 cut(s)	7
AspS9I	GGNCC	2 cut(s)	353, 460
AsuC2I	CCSGG	2 cut(s)	47, 127
AsuHPI	GGTGA	4 cut(s)	41, 403, 834, 1628
AvaI	CYCGRG	1 cut(s)	276
BaeGI	GKGCMC	1 cut(s)	821
BanI	GGYRCC	1 cut(s)	4
BanII	GRGCYC	1 cut(s)	405
BbsI	GAAGAC	2 cut(s)	1065, 1591
Bbv12I	GWGCWC	1 cut(s)	1205
BbvI	GCAGC	6 cut(s)	574, 837, 862, 1446, 1454, 1808
BccI	CCATC	5 cut(s)	850, 950, 1035, 1304, 1858
BciT130I	CCWGG	2 cut(s)	351, 1883
BclI	TGATCA	1 cut(s)	1357
BcnI	CCSGG	2 cut(s)	47, 127
BcoDI	GTCTC	4 cut(s)	548, 553, 1752, 2096
BfaI	CTAG	1 cut(s)	780
BfmI	CTRYAG	8 cut(s)	806, 1155, 1387, 1440, 1523, 1720, 1822, 2078
BfoI	RGCGCY	1 cut(s)	8
BfrI	CTTAAG	1 cut(s)	1994
BfuAI	ACCTGC	2 cut(s)	853, 2052
BisI	GCNGC	8 cut(s)	298, 588, 826, 876, 1443, 1460, 1644, 1822
BlsI	GCNGC	8 cut(s)	299, 589, 827, 877, 1444, 1461, 1645, 1823
Bme1390I	CCNGG	4 cut(s)	47, 127, 351, 1883
BmeT110I	CYCGRG	1 cut(s)	276
BmgT120I	GGNCC	2 cut(s)	353, 460
BmiI	GGNNCC	5 cut(s)	6, 404, 640, 1020, 1925
BmrFI	CCNGG	4 cut(s)	47, 127, 351, 1883
BmrI	ACTGGG	2 cut(s)	408, 731
BmsI	GCATC	8 cut(s)	104, 473, 574, 617, 763, 850, 2048, 2091
BmuI	ACTGGG	2 cut(s)	408, 731
BpiI	GAAGAC	2 cut(s)	1065, 1591
BpmI	CTGGAG	2 cut(s)	53, 1219
Bpu10I	CCTNAGC	1 cut(s)	1887
BpuEI	CTTGAG	3 cut(s)	1391, 1402, 1517
BpuMI	CCSGG	2 cut(s)	47, 127
BsaHI	GRCGYC	2 cut(s)	5, 1399
BsaI	GGTCTC	1 cut(s)	2096
BsaJI	CCNNGG	4 cut(s)	45, 478, 1014, 1881
BsaWI	WCCGGW	1 cut(s)	1319
BsaXI	ACNNNNNCTCC	6 cut(s)	331, 361, 488, 518, 1511, 1541
Bsc4I	CCNNNNNNNGG	4 cut(s)	132, 528, 1744, 1888
Bse1I	ACTGG	6 cut(s)	403, 609, 737, 1330, 1925, 1927
Bse3DI	GCAATG	2 cut(s)	1445, 1844
BseBI	CCWGG	2 cut(s)	351, 1883
BseDI	CCNNGG	4 cut(s)	45, 478, 1014, 1881
BseLI	CCNNNNNNNGG	4 cut(s)	132, 528, 1744, 1888
BseMI	GCAATG	2 cut(s)	1445, 1844
BseMII	CTCAG	3 cut(s)	840, 1095, 1901
BseNI	ACTGG	6 cut(s)	403, 609, 737, 1330, 1925, 1927
BseRI	GAGGAG	3 cut(s)	145, 148, 1843
BseSI	GKGCMC	1 cut(s)	821
BseXI	GCAGC	6 cut(s)	574, 837, 862, 1446, 1454, 1808
BseYI	CCCAGC	4 cut(s)	300, 457, 1229, 2105
BsgI	GTGCAG	1 cut(s)	2150
BshFI	GGCC	3 cut(s)	354, 462, 2141
BshNI	GGYRCC	1 cut(s)	4
BsiHKAI	GWGCWC	1 cut(s)	1205
BsiHKCI	CYCGRG	1 cut(s)	276
BsiSI	CCGG	3 cut(s)	47, 127, 1320
BslFI	GGGAC	5 cut(s)	133, 1410, 1587, 1972, 1981
BslI	CCNNNNNNNGG	4 cut(s)	132, 528, 1744, 1888
BsmAI	GTCTC	4 cut(s)	548, 553, 1752, 2096
BsmFI	GGGAC	5 cut(s)	133, 1410, 1587, 1972, 1981
BsnI	GGCC	3 cut(s)	354, 462, 2141
Bso31I	GGTCTC	1 cut(s)	2096
BsoBI	CYCGRG	1 cut(s)	276
Bsp1286I	GDGCHC	3 cut(s)	405, 821, 1205
Bsp1407I	TGTACA	3 cut(s)	383, 1694, 1875
Bsp19I	CCATGG	1 cut(s)	478
BspACI	CCGC	5 cut(s)	262, 298, 934, 1088, 1644
BspANI	GGCC	3 cut(s)	354, 462, 2141
BspCNI	CTCAG	3 cut(s)	841, 1096, 1900
BspHI	TCATGA	3 cut(s)	1504, 1677, 1915
BspLI	GGNNCC	5 cut(s)	6, 404, 640, 1020, 1925
BspMAI	CTGCAG	3 cut(s)	810, 1444, 1826
BspMI	ACCTGC	2 cut(s)	853, 2052
BspPI	GGATC	5 cut(s)	539, 727, 847, 1274, 1440
BspQI	GCTCTTC	1 cut(s)	398
BspT107I	GGYRCC	1 cut(s)	4
BspTI	CTTAAG	1 cut(s)	1994
BspTNI	GGTCTC	1 cut(s)	2096
BsrDI	GCAATG	2 cut(s)	1445, 1844
BsrGI	TGTACA	3 cut(s)	383, 1694, 1875
BsrI	ACTGG	6 cut(s)	403, 609, 737, 1330, 1925, 1927
BssECI	CCNNGG	4 cut(s)	45, 478, 1014, 1881
BssNI	GRCGYC	2 cut(s)	5, 1399
BssT1I	CCWWGG	1 cut(s)	478
Bst2UI	CCWGG	2 cut(s)	351, 1883
Bst4CI	ACNGT	7 cut(s)	564, 620, 1064, 1207, 1364, 1486, 1527
Bst6I	CTCTTC	1 cut(s)	398
BstACI	GRCGYC	2 cut(s)	5, 1399
BstAFI	CTTAAG	1 cut(s)	1994
BstAPI	GCANNNNNTGC	1 cut(s)	1821
BstAUI	TGTACA	3 cut(s)	383, 1694, 1875
BstC8I	GCNNGC	2 cut(s)	538, 1098
BstDEI	CTNAG	3 cut(s)	849, 1104, 1887
BstDSI	CCRYGG	2 cut(s)	478, 1014
BstENI	CCTNNNNNAGG	1 cut(s)	1886
BstH2I	RGCGCY	1 cut(s)	8
BstHHI	GCGC	1 cut(s)	7
BstMAI	GTCTC	4 cut(s)	548, 553, 1752, 2096
BstMWI	GCNNNNNNNGC	5 cut(s)	825, 1407, 1456, 1821, 1855
BstNI	CCWGG	2 cut(s)	351, 1883
BstNSI	RCATGY	1 cut(s)	999
BstSCI	CCNGG	4 cut(s)	45, 125, 349, 1881
BstSFI	CTRYAG	8 cut(s)	806, 1155, 1387, 1440, 1523, 1720, 1822, 2078
BstSLI	GKGCMC	1 cut(s)	821
BstV1I	GCAGC	6 cut(s)	574, 837, 862, 1446, 1454, 1808
BstV2I	GAAGAC	2 cut(s)	1065, 1591
BstX2I	RGATCY	2 cut(s)	732, 1432
BstXI	CCANNNNNNTGG	1 cut(s)	421
BstYI	RGATCY	2 cut(s)	732, 1432
BsuRI	GGCC	3 cut(s)	354, 462, 2141
BtgI	CCRYGG	2 cut(s)	478, 1014
BtsI	GCAGTG	1 cut(s)	896
BtsIMutI	CAGTG	4 cut(s)	396, 896, 1360, 1482
BveI	ACCTGC	2 cut(s)	853, 2052
Cac8I	GCNNGC	2 cut(s)	538, 1098
CaiI	CAGNNNCTG	1 cut(s)	1821
CciI	TCATGA	3 cut(s)	1504, 1677, 1915
CfoI	GCGC	1 cut(s)	7
Cfr13I	GGNCC	2 cut(s)	353, 460
CseI	GACGC	1 cut(s)	1407
Csp6I	GTAC	7 cut(s)	384, 616, 803, 960, 1695, 1876, 1954
CviQI	GTAC	7 cut(s)	384, 616, 803, 960, 1695, 1876, 1954
DdeI	CTNAG	3 cut(s)	849, 1104, 1887
DinI	GGCGCC	1 cut(s)	6
DraI	TTTAAA	1 cut(s)	1936
Eam1104I	CTCTTC	1 cut(s)	398
EarI	CTCTTC	1 cut(s)	398
Eco130I	CCWWGG	1 cut(s)	478
Eco24I	GRGCYC	1 cut(s)	405
Eco31I	GGTCTC	1 cut(s)	2096
Eco32I	GATATC	1 cut(s)	1578
Eco57I	CTGAAG	1 cut(s)	1167
Eco88I	CYCGRG	1 cut(s)	276
EcoNI	CCTNNNNNAGG	1 cut(s)	1886
EcoRII	CCWGG	2 cut(s)	349, 1881
EcoRV	GATATC	1 cut(s)	1578
EcoT14I	CCWWGG	1 cut(s)	478
EcoT38I	GRGCYC	1 cut(s)	405
EgeI	GGCGCC	1 cut(s)	6
EheI	GGCGCC	1 cut(s)	6
ErhI	CCWWGG	1 cut(s)	478
FalI	AAGNNNNNCTT	2 cut(s)	1770, 1802
FaqI	GGGAC	5 cut(s)	133, 1410, 1587, 1972, 1981
FbaI	TGATCA	1 cut(s)	1357
FblI	GTMKAC	1 cut(s)	575
Fnu4HI	GCNGC	8 cut(s)	298, 588, 826, 876, 1443, 1460, 1644, 1822
FriOI	GRGCYC	1 cut(s)	405
Fsp4HI	GCNGC	8 cut(s)	298, 588, 826, 876, 1443, 1460, 1644, 1822
FspBI	CTAG	1 cut(s)	780
GlaI	GCGC	1 cut(s)	6
GluI	GCNGC	8 cut(s)	298, 588, 826, 876, 1443, 1460, 1644, 1822
GsaI	CCCAGC	4 cut(s)	304, 461, 1233, 2109
GsuI	CTGGAG	2 cut(s)	53, 1219
HaeII	RGCGCY	1 cut(s)	8
HaeIII	GGCC	3 cut(s)	354, 462, 2141
HapII	CCGG	3 cut(s)	47, 127, 1320
HgaI	GACGC	1 cut(s)	1407
HhaI	GCGC	1 cut(s)	7
Hin1I	GRCGYC	2 cut(s)	5, 1399
Hin6I	GCGC	1 cut(s)	5
HinP1I	GCGC	1 cut(s)	5
HindIII	AAGCTT	3 cut(s)	210, 1027, 1094
HpaII	CCGG	3 cut(s)	47, 127, 1320
HphI	GGTGA	4 cut(s)	41, 403, 834, 1628
Hpy166II	GTNNAC	5 cut(s)	386, 576, 1559, 1695, 1878
Hpy188I	TCNGA	8 cut(s)	100, 697, 1077, 1105, 1309, 1599, 2023, 2100
Hpy8I	GTNNAC	5 cut(s)	386, 576, 1559, 1695, 1878
Hpy99I	CGWCG	3 cut(s)	167, 170, 2121
HpyAV	CCTTC	8 cut(s)	18, 92, 325, 416, 517, 1541, 1564, 1748
HpyCH4III	ACNGT	7 cut(s)	564, 620, 1064, 1207, 1364, 1486, 1527
HpyCH4IV	ACGT	2 cut(s)	1865, 2116
HpyF10VI	GCNNNNNNNGC	5 cut(s)	825, 1407, 1456, 1821, 1855
HpyF3I	CTNAG	3 cut(s)	849, 1104, 1887
HpySE526I	ACGT	2 cut(s)	1865, 2116
Hsp92I	GRCGYC	2 cut(s)	5, 1399
HspAI	GCGC	1 cut(s)	5
KasI	GGCGCC	1 cut(s)	4
Ksp22I	TGATCA	1 cut(s)	1357
LguI	GCTCTTC	1 cut(s)	398
LmnI	GCTCC	5 cut(s)	408, 1018, 1200, 1519, 1891
Lsp1109I	GCAGC	6 cut(s)	574, 837, 862, 1446, 1454, 1808
LweI	GCATC	8 cut(s)	104, 473, 574, 617, 763, 850, 2048, 2091
MaeI	CTAG	1 cut(s)	780
MaeII	ACGT	2 cut(s)	1865, 2116
MaeIII	GTNAC	3 cut(s)	376, 1150, 1238
MflI	RGATCY	2 cut(s)	732, 1432
MhlI	GDGCHC	3 cut(s)	405, 821, 1205
MluCI	AATT	9 cut(s)	104, 108, 179, 234, 1184, 1412, 1538, 1710, 1752
Mly113I	GGCGCC	1 cut(s)	5
MlyI	GAGTC	2 cut(s)	1609, 1754
MmeI	TCCRAC	1 cut(s)	1451
MroXI	GAANNNNTTC	4 cut(s)	179, 213, 941, 1737
MslI	CAYNNNNRTG	2 cut(s)	707, 2099
MspA1I	CMGCKG	1 cut(s)	300
MspCI	CTTAAG	1 cut(s)	1994
MspI	CCGG	3 cut(s)	47, 127, 1320
MspR9I	CCNGG	4 cut(s)	47, 127, 351, 1883
MvaI	CCWGG	2 cut(s)	351, 1883
MwoI	GCNNNNNNNGC	5 cut(s)	825, 1407, 1456, 1821, 1855
NarI	GGCGCC	1 cut(s)	5
NciI	CCSGG	2 cut(s)	47, 127
NcoI	CCATGG	1 cut(s)	478
NlaIV	GGNNCC	5 cut(s)	6, 404, 640, 1020, 1925
NmuCI	GTSAC	1 cut(s)	1150
NspI	RCATGY	1 cut(s)	999
PagI	TCATGA	3 cut(s)	1504, 1677, 1915
PaqCI	CACCTGC	1 cut(s)	853
PciSI	GCTCTTC	1 cut(s)	398
PdmI	GAANNNNTTC	4 cut(s)	179, 213, 941, 1737
PfeI	GAWTC	8 cut(s)	35, 239, 311, 1126, 1501, 1619, 1774, 2018
PkrI	GCNGC	8 cut(s)	299, 589, 827, 877, 1444, 1461, 1645, 1823
PleI	GAGTC	2 cut(s)	1608, 1754
PluTI	GGCGCC	1 cut(s)	8
PpsI	GAGTC	2 cut(s)	1608, 1754
PshBI	ATTAAT	2 cut(s)	107, 1751
Psp6I	CCWGG	2 cut(s)	349, 1881
PspFI	CCCAGC	4 cut(s)	300, 457, 1229, 2105
PspGI	CCWGG	2 cut(s)	349, 1881
PspN4I	GGNNCC	5 cut(s)	6, 404, 640, 1020, 1925
PspPI	GGNCC	2 cut(s)	353, 460
PsrI	GAACNNNNNNTAC	2 cut(s)	1370, 1402
PstI	CTGCAG	3 cut(s)	810, 1444, 1826
PstNI	CAGNNNCTG	1 cut(s)	1821
PsuI	RGATCY	2 cut(s)	732, 1432
RsaI	GTAC	7 cut(s)	385, 617, 804, 961, 1696, 1877, 1955
RsaNI	GTAC	7 cut(s)	384, 616, 803, 960, 1695, 1876, 1954
RseI	CAYNNNNRTG	2 cut(s)	707, 2099
SapI	GCTCTTC	1 cut(s)	398
SatI	GCNGC	8 cut(s)	298, 588, 826, 876, 1443, 1460, 1644, 1822
Sau96I	GGNCC	2 cut(s)	353, 460
SchI	GAGTC	2 cut(s)	1609, 1754
ScrFI	CCNGG	4 cut(s)	47, 127, 351, 1883
SduI	GDGCHC	3 cut(s)	405, 821, 1205
SfaNI	GCATC	8 cut(s)	104, 473, 574, 617, 763, 850, 2048, 2091
SfcI	CTRYAG	8 cut(s)	806, 1155, 1387, 1440, 1523, 1720, 1822, 2078
SfoI	GGCGCC	1 cut(s)	6
SmiMI	CAYNNNNRTG	2 cut(s)	707, 2099
SmlI	CTYRAG	4 cut(s)	1370, 1381, 1496, 1994
SmoI	CTYRAG	4 cut(s)	1370, 1381, 1496, 1994
Sse9I	AATT	9 cut(s)	104, 108, 179, 234, 1184, 1412, 1538, 1710, 1752
SsiI	CCGC	5 cut(s)	262, 298, 934, 1088, 1644
SspDI	GGCGCC	1 cut(s)	4
SspI	AATATT	1 cut(s)	1533
SspMI	CTAG	1 cut(s)	780
StyD4I	CCNGG	4 cut(s)	45, 125, 349, 1881
StyI	CCWWGG	1 cut(s)	478
TaaI	ACNGT	7 cut(s)	564, 620, 1064, 1207, 1364, 1486, 1527
TaiI	ACGT	2 cut(s)	1868, 2119
TaqI	TCGA	5 cut(s)	183, 285, 443, 510, 1249
TaqII	GACCGA	1 cut(s)	176
TasI	AATT	9 cut(s)	104, 108, 179, 234, 1184, 1412, 1538, 1710, 1752
TatI	WGTACW	5 cut(s)	383, 802, 1694, 1875, 1953
TauI	GCSGC	2 cut(s)	300, 1646
TfiI	GAWTC	8 cut(s)	35, 239, 311, 1126, 1501, 1619, 1774, 2018
TscAI	CASTG	4 cut(s)	403, 896, 1367, 1489
TseFI	GTSAC	1 cut(s)	1150
TseI	GCWGC	6 cut(s)	587, 825, 875, 1442, 1459, 1821
Tsp45I	GTSAC	1 cut(s)	1150
TspGWI	ACGGA	2 cut(s)	1031, 1780
TspRI	CASTG	4 cut(s)	403, 896, 1367, 1489
Vha464I	CTTAAG	1 cut(s)	1994
VspI	ATTAAT	2 cut(s)	107, 1751
XagI	CCTNNNNNAGG	1 cut(s)	1886
XceI	RCATGY	1 cut(s)	999
XmiI	GTMKAC	1 cut(s)	575
XmnI	GAANNNNTTC	4 cut(s)	179, 213, 941, 1737
XspI	CTAG	1 cut(s)	780

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.