Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0006993

Physical Location & Seq

Genomic Coordinates Forward (+)

16242966 .. 16248826

Gene Structure 5861 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000027866

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1554 bp

ATGGAGAATCTGATCTCGCTCGTGAACAAAATACAGAGAGCATGCACAGCCCTCGGCGATCACGGCGACGAGAGCGCAATGCCGACTCTCTGGGACTCCCTCCCCGCCATCGCCGTCGTCGGCGGCCAGAGCTCCGGTAAGTCGTCGGTGCTGGAGAGCATTGTCGGCAAAGACTTCCTACCTCGCGGCTCCGGAATTGTGACTCGGCGTCCGCTTGTGTTGCAGCTGCATAAGATCGACGAGGGAAGAGAATACGCCGAGTTTATGCACCTCCCGAGGAAGAGGTTCACTGATTTTGCTGCTGTTAGACAGGAGATATCTGATGAGACTGATAGAGAGACCGGCCGGACCAAGGCGATTTCGAGTGTGCCTATCCATCTTAGCATCTACTCCCCTAATGTTGTGAACTTGACACTAATAGATCTTCCTGGACTCACAAAGGTAGCTGTAGAGGGTCAGGCAGAGAGCATAGTGCATGAAATTGAGAACATGGTTAGGGGCTTCATTGAGAAGATTTTGGAAGGAAGATCATATAGACTTCAGTTCCCTTGGATTGGTGTTGTGAATCGCTCCCAAGCTGATATAAACAAGAGTGTTGATATGATTGCAGCTAGGCGTAGGGAGCGTGAATATTTTGCTAATAGCCCCGAGTACAAGCATCTTACGAGCAAGATGGGATCTGAGCATTTAGGAAGGGTGCTGTCTAAGGGAAAGTTGTATGTAATAATGGAAATCTCTCGTACTTTCGATCAGATATTCAAAGAACATCTTGATGGCGTGCGCTCTGGTGGTGATAAAGTTTATGGTGTGTTTGACAATCAATTTCCAGCTGCTTTGAAGAGATTGCAATTTGACAAGTATCTTTCAATGGAAAACATTCGAAAGCTAATTACTGAGGCAGATGGATATCAACCTCATTTAATTGCTCCTGAACAGGGATACCGTCGCCTCATTGAATCTTCATTAGTATGCATCAAAGGTCCTGCAGAGGCAGCTGTTGATGCTGTTCATGCCATATTGAAGGAGCTGGCTCAGAAGTCTATCAATGCAACCTCAGAATTAAAGCAGTATCCCACTTTAAGAGTGGAAGTTGGGAATGCAGCATTTGAATCACTGGATAGGATGAAAGAAGAGAGCAAGAAAGCAACTATGCAGCTAGTTGATATGGAGTGTGGTTACCTCACTGTTGAATTTTTCCGCAAGCTTCCTCAGGATATTGAAAAGGGGGGAAATCCAACACACTCACTTTTCGACAGATACAACGATTCCTACCTCCGGCGGGTTGGTAACAATGTGTTAAACTATGTGAACATGGTGTGCTCAAGTCTAAGGATTGCTATTCCAAAGTCTATTGTCTACTGTCAAGTACGAGAAGCCAAACGCAGCTTACTCGATCATTTTTTTGCTGAGCTGGGTTCAAAAGAGACAAGACAGTTGTCTAAGATGTTGGATGAGGATCCAGCAGTCATGCAGCGTCGTACCAGCCTTGCAAAGAGGCTAGAGCTGTACAGAAGTGCTCAGGCAGAGATTGATGCAGTTGCTTGGTCCAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Dynamin_M Dynamin_N GED

Protein Analysis

518

Amino Acids

58.39

Weight (kDa)

8.55

Isoelectric Point (pI)

49.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Dynamin_N	PF00350	37 - 170	5.3e-37	Dynamin family
Dynamin_M	PF01031	171 - 236	2.9e-18	Dynamin central region
Dynamin_M	PF01031	238 - 395	3.5e-25	Dynamin central region
GED	PF02212	421 - 513	9.6e-21	Dynamin GTPase effector domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006993)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G61760 AT3G61760 AT3G61760
fragaria_vesca	FvH4_7g16440
malus_domestica	MD01G1080800.v1.1 MD07G1149800.v1.1
prunus_persica	Prupe.2G188500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0359481 RchiOBHm_Chr4g0423491 RchiOBHm_Chr5g0037431 RchiOBHm_Chr6g0269891
rosa_laevigata	RLG00000012393 RLG00000023120 RLG00000027866
rosa_multiflora	Rmu_sc0002556.1_g000007 Rmu_sc0006895.1_g000006
rosa_roxburghii	Rroxscaffold_4G00296970
rosa_rugosa	Rorug01G0271500
rosa_samantha	Rh1AG285000 Rh1BG251100 Rh1CG268900 Rh1DG280200 Rh2BG207000 Rh4DG017500
rosa_wichuraiana	Rw1G025340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	1356
AccII	CGCG	1 cut(s)	186
AccIII	TCCGGA	1 cut(s)	191
AciI	CCGC	6 cut(s)	105, 123, 186, 212, 1198, 1279
AclWI	GGATC	3 cut(s)	685, 1451, 1464
AcoI	YGGCCR	2 cut(s)	124, 343
AcsI	RAATTY	1 cut(s)	1190
AcuI	CTGAAG	1 cut(s)	524
AcyI	GRCGYC	1 cut(s)	208
AfaI	GTAC	5 cut(s)	653, 742, 1368, 1480, 1508
AfiI	CCNNNNNNNGG	5 cut(s)	352, 554, 935, 1275, 1279
AgsI	TTSAA	9 cut(s)	760, 838, 867, 956, 1021, 1109, 1190, 1220, 1419
AhdI	GACNNNNNGTC	1 cut(s)	207
AjnI	CCWGG	1 cut(s)	427
Alw21I	GWGCWC	3 cut(s)	134, 1322, 1519
Alw26I	GTCTC	3 cut(s)	320, 332, 1418
AlwI	GGATC	3 cut(s)	685, 1451, 1464
Ama87I	CYCGRG	2 cut(s)	274, 647
Aor13HI	TCCGGA	1 cut(s)	191
AoxI	GGCC	2 cut(s)	124, 343
ApoI	RAATTY	1 cut(s)	1190
Asp700I	GAANNNNTTC	2 cut(s)	284, 876
AspLEI	GCGC	2 cut(s)	77, 783
AspS9I	GGNCC	3 cut(s)	348, 980, 1545
AsuHPI	GGTGA	1 cut(s)	803
AsuII	TTCGAA	1 cut(s)	880
AvaI	CYCGRG	2 cut(s)	274, 647
AvaII	GGWCC	3 cut(s)	348, 980, 1545
AxyI	CCTNAGG	1 cut(s)	1209
BamHI	GGATCC	1 cut(s)	1456
BanII	GRGCYC	1 cut(s)	134
BauI	CACGAG	1 cut(s)	20
Bbv12I	GWGCWC	3 cut(s)	134, 1322, 1519
BccI	CCATC	5 cut(s)	116, 384, 667, 767, 896
BceAI	ACGGC	2 cut(s)	79, 98
BcgI	CGANNNNNNTGC	4 cut(s)	34, 68, 1372, 1406
BciT130I	CCWGG	1 cut(s)	429
BciVI	GTATCC	2 cut(s)	932, 1080
BcoDI	GTCTC	3 cut(s)	320, 332, 1418
BfaI	CTAG	3 cut(s)	612, 1157, 1499
BfmI	CTRYAG	2 cut(s)	447, 984
BfuI	GTATCC	2 cut(s)	932, 1080
BglII	AGATCT	1 cut(s)	421
BlpI	GCTNAGC	1 cut(s)	1407
Bme1390I	CCNGG	1 cut(s)	429
Bme18I	GGWCC	3 cut(s)	348, 980, 1545
BmeRI	GACNNNNNGTC	1 cut(s)	207
BmeT110I	CYCGRG	2 cut(s)	274, 647
BmgT120I	GGNCC	3 cut(s)	348, 980, 1545
BmiI	GGNNCC	2 cut(s)	190, 1458
BmrFI	CCNGG	1 cut(s)	429
BmsI	GCATC	5 cut(s)	393, 667, 981, 991, 1522
BoxI	GACNNNNGTC	1 cut(s)	1435
BpmI	CTGGAG	1 cut(s)	173
Bpu10I	CCTNAGC	1 cut(s)	1518
Bpu1102I	GCTNAGC	1 cut(s)	1407
Bpu14I	TTCGAA	1 cut(s)	880
BpuEI	CTTGAG	1 cut(s)	1306
BsaBI	GATNNNNATC	2 cut(s)	906, 1455
BsaHI	GRCGYC	1 cut(s)	208
BsaI	GGTCTC	1 cut(s)	332
BsaJI	CCNNGG	4 cut(s)	52, 275, 351, 548
BsaWI	WCCGGW	2 cut(s)	134, 191
Bsc4I	CCNNNNNNNGG	5 cut(s)	352, 554, 935, 1275, 1279
Bse118I	RCCGGY	1 cut(s)	341
Bse1I	ACTGG	1 cut(s)	1119
Bse21I	CCTNAGG	1 cut(s)	1209
Bse3DI	GCAATG	1 cut(s)	84
Bse8I	GATNNNNATC	2 cut(s)	906, 1455
BseAI	TCCGGA	1 cut(s)	191
BseBI	CCWGG	1 cut(s)	429
BseDI	CCNNGG	4 cut(s)	52, 275, 351, 548
BseGI	GGATG	2 cut(s)	1128, 1456
BseJI	GATNNNNATC	2 cut(s)	906, 1455
BseLI	CCNNNNNNNGG	5 cut(s)	352, 554, 935, 1275, 1279
BseMI	GCAATG	1 cut(s)	84
BseMII	CTCAG	7 cut(s)	672, 885, 1046, 1068, 1223, 1398, 1532
BseNI	ACTGG	1 cut(s)	1119
BseX3I	CGGCCG	1 cut(s)	343
BseYI	CCCAGC	1 cut(s)	1411
Bsh1236I	CGCG	1 cut(s)	186
Bsh1285I	CGRYCG	1 cut(s)	346
BshFI	GGCC	2 cut(s)	126, 345
BsiEI	CGRYCG	1 cut(s)	346
BsiHKAI	GWGCWC	3 cut(s)	134, 1322, 1519
BsiHKCI	CYCGRG	2 cut(s)	274, 647
BsiSI	CCGG	5 cut(s)	135, 192, 342, 346, 1276
BslFI	GGGAC	1 cut(s)	107
BslI	CCNNNNNNNGG	5 cut(s)	352, 554, 935, 1275, 1279
BsmAI	GTCTC	3 cut(s)	320, 332, 1418
BsmFI	GGGAC	1 cut(s)	107
BsmI	GAATGC	1 cut(s)	1102
BsnI	GGCC	2 cut(s)	126, 345
Bso31I	GGTCTC	1 cut(s)	332
BsoBI	CYCGRG	2 cut(s)	274, 647
Bsp119I	TTCGAA	1 cut(s)	880
Bsp1286I	GDGCHC	3 cut(s)	134, 1322, 1519
Bsp13I	TCCGGA	1 cut(s)	191
Bsp1407I	TGTACA	1 cut(s)	1506
Bsp143I	GATC	9 cut(s)	12, 58, 234, 421, 527, 677, 748, 1393, 1456
Bsp1720I	GCTNAGC	1 cut(s)	1407
BspACI	CCGC	6 cut(s)	105, 123, 186, 212, 1198, 1279
BspANI	GGCC	2 cut(s)	126, 345
BspCNI	CTCAG	7 cut(s)	673, 886, 1045, 1067, 1222, 1399, 1531
BspEI	TCCGGA	1 cut(s)	191
BspFNI	CGCG	1 cut(s)	186
BspLI	GGNNCC	2 cut(s)	190, 1458
BspMAI	CTGCAG	1 cut(s)	988
BspPI	GGATC	3 cut(s)	685, 1451, 1464
BspT104I	TTCGAA	1 cut(s)	880
BspTNI	GGTCTC	1 cut(s)	332
BsrDI	GCAATG	1 cut(s)	84
BsrFI	RCCGGY	1 cut(s)	341
BsrGI	TGTACA	1 cut(s)	1506
BsrI	ACTGG	1 cut(s)	1119
BssAI	RCCGGY	1 cut(s)	341
BssECI	CCNNGG	4 cut(s)	52, 275, 351, 548
BssMI	GATC	9 cut(s)	12, 58, 234, 421, 527, 677, 748, 1393, 1456
BssNI	GRCGYC	1 cut(s)	208
BssSI	CACGAG	1 cut(s)	20
BssT1I	CCWWGG	2 cut(s)	351, 548
Bst2BI	CACGAG	1 cut(s)	20
Bst2UI	CCWGG	1 cut(s)	429
Bst4CI	ACNGT	4 cut(s)	944, 1186, 1361, 1434
Bst6I	CTCTTC	4 cut(s)	241, 275, 833, 1125
BstACI	GRCGYC	1 cut(s)	208
BstAUI	TGTACA	1 cut(s)	1506
BstBI	TTCGAA	1 cut(s)	880
BstC8I	GCNNGC	4 cut(s)	43, 779, 1029, 1202
BstEII	GGTNACC	1 cut(s)	1175
BstF5I	GGATG	2 cut(s)	1128, 1456
BstFNI	CGCG	1 cut(s)	186
BstHHI	GCGC	2 cut(s)	77, 783
BstKTI	GATC	9 cut(s)	15, 61, 237, 424, 530, 680, 751, 1396, 1459
BstMAI	GTCTC	3 cut(s)	320, 332, 1418
BstMBI	GATC	9 cut(s)	12, 58, 234, 421, 527, 677, 748, 1393, 1456
BstMCI	CGRYCG	1 cut(s)	346
BstNI	CCWGG	1 cut(s)	429
BstNSI	RCATGY	1 cut(s)	45
BstPAI	GACNNNNGTC	1 cut(s)	1435
BstPI	GGTNACC	1 cut(s)	1175
BstSCI	CCNGG	1 cut(s)	427
BstSFI	CTRYAG	2 cut(s)	447, 984
BstUI	CGCG	1 cut(s)	186
BstX2I	RGATCY	3 cut(s)	421, 677, 1456
BstYI	RGATCY	3 cut(s)	421, 677, 1456
BstZI	CGGCCG	1 cut(s)	343
Bsu36I	CCTNAGG	1 cut(s)	1209
BsuI	GTATCC	2 cut(s)	932, 1080
BsuRI	GGCC	2 cut(s)	126, 345
BtgZI	GCGATG	1 cut(s)	94
BtsCI	GGATG	2 cut(s)	1128, 1456
BtsIMutI	CAGTG	3 cut(s)	288, 1112, 1182
Cac8I	GCNNGC	4 cut(s)	43, 779, 1029, 1202
CfoI	GCGC	2 cut(s)	77, 783
Cfr10I	RCCGGY	1 cut(s)	341
Cfr13I	GGNCC	3 cut(s)	348, 980, 1545
CseI	GACGC	2 cut(s)	197, 1463
Csp6I	GTAC	5 cut(s)	652, 741, 1367, 1479, 1507
CviAII	CATG	6 cut(s)	42, 476, 490, 1010, 1312, 1468
CviQI	GTAC	5 cut(s)	652, 741, 1367, 1479, 1507
DpnI	GATC	9 cut(s)	14, 60, 236, 423, 529, 679, 750, 1395, 1458
DpnII	GATC	9 cut(s)	12, 58, 234, 421, 527, 677, 748, 1393, 1456
DriI	GACNNNNNGTC	1 cut(s)	207
EaeI	YGGCCR	2 cut(s)	124, 343
EagI	CGGCCG	1 cut(s)	343
Eam1104I	CTCTTC	4 cut(s)	241, 275, 833, 1125
Eam1105I	GACNNNNNGTC	1 cut(s)	207
EarI	CTCTTC	4 cut(s)	241, 275, 833, 1125
Ecl136II	GAGCTC	1 cut(s)	132
EclXI	CGGCCG	1 cut(s)	343
Eco130I	CCWWGG	2 cut(s)	351, 548
Eco24I	GRGCYC	1 cut(s)	134
Eco31I	GGTCTC	1 cut(s)	332
Eco32I	GATATC	2 cut(s)	318, 908
Eco47I	GGWCC	3 cut(s)	348, 980, 1545
Eco52I	CGGCCG	1 cut(s)	343
Eco53kI	GAGCTC	1 cut(s)	132
Eco57I	CTGAAG	1 cut(s)	524
Eco81I	CCTNAGG	1 cut(s)	1209
Eco88I	CYCGRG	2 cut(s)	274, 647
Eco91I	GGTNACC	1 cut(s)	1175
EcoICRI	GAGCTC	1 cut(s)	132
EcoO109I	RGGNCCY	1 cut(s)	980
EcoO65I	GGTNACC	1 cut(s)	1175
EcoRII	CCWGG	1 cut(s)	427
EcoRV	GATATC	2 cut(s)	318, 908
EcoT14I	CCWWGG	2 cut(s)	351, 548
EcoT22I	ATGCAT	1 cut(s)	974
EcoT38I	GRGCYC	1 cut(s)	134
ErhI	CCWWGG	2 cut(s)	351, 548
FaeI	CATG	6 cut(s)	45, 479, 493, 1013, 1315, 1471
FalI	AAGNNNNNCTT	2 cut(s)	753, 785
FaqI	GGGAC	1 cut(s)	107
FatI	CATG	6 cut(s)	41, 475, 489, 1009, 1311, 1467
FauI	CCCGC	2 cut(s)	112, 1272
FblI	GTMKAC	1 cut(s)	1356
FokI	GGATG	2 cut(s)	1135, 1463
FriOI	GRGCYC	1 cut(s)	134
FspBI	CTAG	3 cut(s)	612, 1157, 1499
GlaI	GCGC	2 cut(s)	76, 782
GsaI	CCCAGC	1 cut(s)	1415
GsuI	CTGGAG	1 cut(s)	173
HaeIII	GGCC	2 cut(s)	126, 345
HapII	CCGG	5 cut(s)	135, 192, 342, 346, 1276
HgaI	GACGC	2 cut(s)	197, 1463
HhaI	GCGC	2 cut(s)	77, 783
Hin1I	GRCGYC	1 cut(s)	208
Hin1II	CATG	6 cut(s)	45, 479, 493, 1013, 1315, 1471
Hin6I	GCGC	2 cut(s)	75, 781
HinP1I	GCGC	2 cut(s)	75, 781
HindIII	AAGCTT	1 cut(s)	1202
HinfI	GANTC	9 cut(s)	7, 85, 95, 202, 432, 565, 956, 1109, 1265
HpaII	CCGG	5 cut(s)	135, 192, 342, 346, 1276
HphI	GGTGA	1 cut(s)	803
Hpy166II	GTNNAC	5 cut(s)	25, 288, 406, 1309, 1357
Hpy188I	TCNGA	6 cut(s)	12, 322, 682, 753, 1035, 1057
Hpy188III	TCNNGA	6 cut(s)	22, 192, 274, 770, 929, 1211
Hpy8I	GTNNAC	5 cut(s)	25, 288, 406, 1309, 1357
Hpy99I	CGWCG	7 cut(s)	71, 119, 122, 148, 242, 948, 1479
HpyAV	CCTTC	3 cut(s)	515, 687, 1015
HpyCH4III	ACNGT	4 cut(s)	944, 1186, 1361, 1434
Hsp92I	GRCGYC	1 cut(s)	208
Hsp92II	CATG	6 cut(s)	45, 479, 493, 1013, 1315, 1471
HspAI	GCGC	2 cut(s)	75, 781
Kpn2I	TCCGGA	1 cut(s)	191
Kzo9I	GATC	9 cut(s)	12, 58, 234, 421, 527, 677, 748, 1393, 1456
LmnI	GCTCC	6 cut(s)	137, 194, 575, 622, 931, 1024
LweI	GCATC	5 cut(s)	393, 667, 981, 991, 1522
MaeI	CTAG	3 cut(s)	612, 1157, 1499
MaeIII	GTNAC	3 cut(s)	199, 1175, 1286
MalI	GATC	9 cut(s)	14, 60, 236, 423, 529, 679, 750, 1395, 1458
MboI	GATC	9 cut(s)	12, 58, 234, 421, 527, 677, 748, 1393, 1456
MboII	GAAGA	8 cut(s)	258, 292, 416, 523, 537, 850, 951, 1142
MflI	RGATCY	3 cut(s)	421, 677, 1456
MhlI	GDGCHC	3 cut(s)	134, 1322, 1519
MluCI	AATT	8 cut(s)	195, 480, 821, 848, 888, 921, 1058, 1190
MlyI	GAGTC	4 cut(s)	79, 89, 196, 426
MmeI	TCCRAC	2 cut(s)	1259, 1428
Mph1103I	ATGCAT	1 cut(s)	974
MroI	TCCGGA	1 cut(s)	191
MroXI	GAANNNNTTC	2 cut(s)	284, 876
MseI	TTAA	4 cut(s)	920, 1061, 1079, 1298
MslI	CAYNNNNRTG	2 cut(s)	771, 967
MspA1I	CMGCKG	3 cut(s)	226, 830, 995
MspI	CCGG	5 cut(s)	135, 192, 342, 346, 1276
MspR9I	CCNGG	1 cut(s)	429
Mva1269I	GAATGC	1 cut(s)	1102
MvaI	CCWGG	1 cut(s)	429
MvnI	CGCG	1 cut(s)	186
NdeII	GATC	9 cut(s)	12, 58, 234, 421, 527, 677, 748, 1393, 1456
NlaIII	CATG	6 cut(s)	45, 479, 493, 1013, 1315, 1471
NlaIV	GGNNCC	2 cut(s)	190, 1458
NmeAIII	GCCGAG	3 cut(s)	33, 184, 283
NmuCI	GTSAC	1 cut(s)	199
NsiI	ATGCAT	1 cut(s)	974
NspI	RCATGY	1 cut(s)	45
NspV	TTCGAA	1 cut(s)	880
PaeI	GCATGC	1 cut(s)	45
PctI	GAATGC	1 cut(s)	1102
PdmI	GAANNNNTTC	2 cut(s)	284, 876
PfeI	GAWTC	5 cut(s)	7, 565, 956, 1109, 1265
PfoI	TCCNGGA	1 cut(s)	427
PleI	GAGTC	4 cut(s)	79, 89, 196, 426
PpsI	GAGTC	4 cut(s)	79, 89, 196, 426
PpuMI	RGGWCCY	1 cut(s)	980
PshAI	GACNNNNGTC	1 cut(s)	1435
Psp124BI	GAGCTC	1 cut(s)	134
Psp5II	RGGWCCY	1 cut(s)	980
Psp6I	CCWGG	1 cut(s)	427
PspEI	GGTNACC	1 cut(s)	1175
PspFI	CCCAGC	1 cut(s)	1411
PspGI	CCWGG	1 cut(s)	427
PspN4I	GGNNCC	2 cut(s)	190, 1458
PspPI	GGNCC	3 cut(s)	348, 980, 1545
PspPPI	RGGWCCY	1 cut(s)	980
PstI	CTGCAG	1 cut(s)	988
PsuI	RGATCY	3 cut(s)	421, 677, 1456
PvuII	CAGCTG	3 cut(s)	226, 830, 995
RsaI	GTAC	5 cut(s)	653, 742, 1368, 1480, 1508
RsaNI	GTAC	5 cut(s)	652, 741, 1367, 1479, 1507
RseI	CAYNNNNRTG	2 cut(s)	771, 967
SacI	GAGCTC	1 cut(s)	134
SaqAI	TTAA	4 cut(s)	920, 1061, 1079, 1298
Sau3AI	GATC	9 cut(s)	12, 58, 234, 421, 527, 677, 748, 1393, 1456
Sau96I	GGNCC	3 cut(s)	348, 980, 1545
SchI	GAGTC	4 cut(s)	79, 89, 196, 426
ScrFI	CCNGG	1 cut(s)	429
SduI	GDGCHC	3 cut(s)	134, 1322, 1519
SfaNI	GCATC	5 cut(s)	393, 667, 981, 991, 1522
SfcI	CTRYAG	2 cut(s)	447, 984
SfuI	TTCGAA	1 cut(s)	880
SinI	GGWCC	3 cut(s)	348, 980, 1545
SmiMI	CAYNNNNRTG	2 cut(s)	771, 967
SmlI	CTYRAG	1 cut(s)	1321
SmoI	CTYRAG	1 cut(s)	1321
SphI	GCATGC	1 cut(s)	45
Sse9I	AATT	8 cut(s)	195, 480, 821, 848, 888, 921, 1058, 1190
SsiI	CCGC	6 cut(s)	105, 123, 186, 212, 1198, 1279
SspI	AATATT	1 cut(s)	632
SspMI	CTAG	3 cut(s)	612, 1157, 1499
SstI	GAGCTC	1 cut(s)	134
StyD4I	CCNGG	1 cut(s)	427
StyI	CCWWGG	2 cut(s)	351, 548
TaaI	ACNGT	4 cut(s)	944, 1186, 1361, 1434
TaqI	TCGA	6 cut(s)	237, 362, 747, 880, 1251, 1392
TasI	AATT	8 cut(s)	195, 480, 821, 848, 888, 921, 1058, 1190
TatI	WGTACW	2 cut(s)	651, 1506
TauI	GCSGC	2 cut(s)	126, 189
TfiI	GAWTC	5 cut(s)	7, 565, 956, 1109, 1265
Tru1I	TTAA	4 cut(s)	920, 1061, 1079, 1298
Tru9I	TTAA	4 cut(s)	920, 1061, 1079, 1298
TscAI	CASTG	3 cut(s)	295, 1119, 1189
TseFI	GTSAC	1 cut(s)	199
Tsp45I	GTSAC	1 cut(s)	199
TspDTI	ATGAA	5 cut(s)	492, 493, 951, 998, 1139
TspRI	CASTG	3 cut(s)	295, 1119, 1189
VpaK11BI	GGWCC	3 cut(s)	348, 980, 1545
XapI	RAATTY	1 cut(s)	1190
XceI	RCATGY	1 cut(s)	45
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1081
XmiI	GTMKAC	1 cut(s)	1356
XmnI	GAANNNNTTC	2 cut(s)	284, 876
XspI	CTAG	3 cut(s)	612, 1157, 1499
Zsp2I	ATGCAT	1 cut(s)	974

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.