RNA recognition motif
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G20930 AT3G20930 |
| fragaria_vesca | FvH4_7g05760 FvH4_7g05760 |
| malus_domestica | MD02G1255600.v1.1 |
| prunus_persica | Prupe.2G080000_v2.0.a1 Prupe.2G080400_v2.0.a1 |
| pyrus_communis | pycom02g21650 |
| rosa_chinensis | RchiOBHm_Chr1g0332801 |
| rosa_laevigata | RLG00000029643 |
| rosa_multiflora | Rmu_ssc0000157.1_g000008 |
| rosa_roxburghii | Rroxscaffold_4G00317970 |
| rosa_rugosa | Rorug01G0103600 |
| rosa_samantha | Rh1AG128400 Rh1BG097600 Rh1CG122200 Rh1DG134000 |
| rosa_wichuraiana | Rw1G010500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 1290 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 229, 458, 540 |
| AccII | CGCG | 1 cut(s) | 1230 |
| AciI | CCGC | 3 cut(s) | 21, 220, 1228 |
| AcyI | GRCGYC | 1 cut(s) | 1291 |
| AfaI | GTAC | 2 cut(s) | 88, 508 |
| AfeI | AGCGCT | 1 cut(s) | 1422 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 225, 229, 254, 458, 540, 569, 1140, 1348, 1488 |
| AgsI | TTSAA | 9 cut(s) | 189, 195, 213, 284, 305, 489, 497, 935, 956 |
| AhlI | ACTAGT | 1 cut(s) | 274 |
| AjnI | CCWGG | 4 cut(s) | 1217, 1286, 1360, 1500 |
| AleI | CACNNNNGTG | 1 cut(s) | 652 |
| AluBI | AGCT | 8 cut(s) | 45, 59, 185, 209, 412, 877, 949, 1031 |
| AluI | AGCT | 8 cut(s) | 45, 59, 185, 209, 412, 877, 949, 1031 |
| Alw21I | GWGCWC | 1 cut(s) | 237 |
| Alw26I | GTCTC | 2 cut(s) | 12, 146 |
| Aor51HI | AGCGCT | 1 cut(s) | 1422 |
| AoxI | GGCC | 5 cut(s) | 1199, 1220, 1363, 1405, 1503 |
| ApaI | GGGCCC | 1 cut(s) | 1203 |
| ApeKI | GCWGC | 5 cut(s) | 182, 1031, 1034, 1037, 1040 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 440, 472 |
| AseI | ATTAAT | 1 cut(s) | 1071 |
| AspLEI | GCGC | 9 cut(s) | 589, 1211, 1252, 1293, 1324, 1354, 1423, 1464, 1494 |
| AspS9I | GGNCC | 9 cut(s) | 990, 1199, 1200, 1221, 1329, 1364, 1406, 1469, 1504 |
| AsuC2I | CCSGG | 3 cut(s) | 426, 564, 1141 |
| AsuHPI | GGTGA | 1 cut(s) | 22 |
| AsuII | TTCGAA | 1 cut(s) | 550 |
| AvaII | GGWCC | 3 cut(s) | 990, 1329, 1469 |
| BaeGI | GKGCMC | 1 cut(s) | 1203 |
| BanI | GGYRCC | 1 cut(s) | 1290 |
| BanII | GRGCYC | 1 cut(s) | 1203 |
| Bbv12I | GWGCWC | 1 cut(s) | 237 |
| BbvCI | CCTCAGC | 1 cut(s) | 205 |
| BbvI | GCAGC | 5 cut(s) | 194, 1018, 1021, 1024, 1027 |
| BccI | CCATC | 4 cut(s) | 113, 136, 223, 1154 |
| BceAI | ACGGC | 1 cut(s) | 1143 |
| BciT130I | CCWGG | 4 cut(s) | 1219, 1288, 1362, 1502 |
| BciVI | GTATCC | 1 cut(s) | 355 |
| BcnI | CCSGG | 3 cut(s) | 426, 564, 1141 |
| BcoDI | GTCTC | 2 cut(s) | 12, 146 |
| BcuI | ACTAGT | 1 cut(s) | 274 |
| BfaI | CTAG | 7 cut(s) | 275, 728, 1107, 1253, 1382, 1424, 1522 |
| BfmI | CTRYAG | 2 cut(s) | 837, 1020 |
| BfoI | RGCGCY | 6 cut(s) | 1212, 1253, 1294, 1355, 1424, 1495 |
| BfuI | GTATCC | 1 cut(s) | 355 |
| BglI | GCCNNNNNGGC | 7 cut(s) | 1144, 1247, 1268, 1299, 1342, 1439, 1482 |
| BisI | GCNGC | 5 cut(s) | 183, 1032, 1035, 1038, 1041 |
| BlsI | GCNGC | 5 cut(s) | 184, 1033, 1036, 1039, 1042 |
| BmcAI | AGTACT | 1 cut(s) | 508 |
| Bme1390I | CCNGG | 7 cut(s) | 426, 564, 1141, 1219, 1288, 1362, 1502 |
| Bme18I | GGWCC | 3 cut(s) | 990, 1329, 1469 |
| BmgT120I | GGNCC | 9 cut(s) | 990, 1199, 1200, 1221, 1329, 1364, 1406, 1469, 1504 |
| BmiI | GGNNCC | 4 cut(s) | 1201, 1292, 1331, 1471 |
| BmrFI | CCNGG | 7 cut(s) | 426, 564, 1141, 1219, 1288, 1362, 1502 |
| BmsI | GCATC | 3 cut(s) | 319, 340, 634 |
| BpmI | CTGGAG | 1 cut(s) | 1401 |
| Bpu10I | CCTNAGC | 2 cut(s) | 205, 1154 |
| Bpu14I | TTCGAA | 1 cut(s) | 550 |
| BpuEI | CTTGAG | 1 cut(s) | 237 |
| BpuMI | CCSGG | 3 cut(s) | 426, 564, 1141 |
| BsaHI | GRCGYC | 1 cut(s) | 1291 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1096, 1126 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 225, 229, 254, 458, 540, 569, 1140, 1348, 1488 |
| Bse1I | ACTGG | 5 cut(s) | 230, 545, 892, 1331, 1471 |
| Bse3DI | GCAATG | 1 cut(s) | 325 |
| BseBI | CCWGG | 4 cut(s) | 1219, 1288, 1362, 1502 |
| BseGI | GGATG | 4 cut(s) | 234, 334, 829, 1086 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 225, 229, 254, 458, 540, 569, 1140, 1348, 1488 |
| BseMI | GCAATG | 1 cut(s) | 325 |
| BseMII | CTCAG | 7 cut(s) | 109, 157, 219, 347, 792, 900, 1145 |
| BseNI | ACTGG | 5 cut(s) | 230, 545, 892, 1331, 1471 |
| BseRI | GAGGAG | 2 cut(s) | 237, 240 |
| BseSI | GKGCMC | 1 cut(s) | 1203 |
| BseXI | GCAGC | 5 cut(s) | 194, 1018, 1021, 1024, 1027 |
| BseYI | CCCAGC | 6 cut(s) | 1237, 1258, 1332, 1408, 1429, 1472 |
| BsgI | GTGCAG | 2 cut(s) | 201, 1026 |
| Bsh1236I | CGCG | 1 cut(s) | 1230 |
| BshFI | GGCC | 5 cut(s) | 1201, 1222, 1365, 1407, 1505 |
| BshNI | GGYRCC | 1 cut(s) | 1290 |
| BsiHKAI | GWGCWC | 1 cut(s) | 237 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 225, 229, 254, 458, 540, 569, 1140, 1348, 1488 |
| BsmAI | GTCTC | 2 cut(s) | 12, 146 |
| BsmI | GAATGC | 1 cut(s) | 1004 |
| BsnI | GGCC | 5 cut(s) | 1201, 1222, 1365, 1407, 1505 |
| Bsp119I | TTCGAA | 1 cut(s) | 550 |
| Bsp120I | GGGCCC | 1 cut(s) | 1199 |
| Bsp1286I | GDGCHC | 2 cut(s) | 237, 1203 |
| Bsp143I | GATC | 3 cut(s) | 1065, 1378, 1518 |
| BspACI | CCGC | 3 cut(s) | 21, 220, 1228 |
| BspANI | GGCC | 5 cut(s) | 1201, 1222, 1365, 1407, 1505 |
| BspCNI | CTCAG | 7 cut(s) | 108, 156, 218, 346, 791, 901, 1146 |
| BspFNI | CGCG | 1 cut(s) | 1230 |
| BspLI | GGNNCC | 4 cut(s) | 1201, 1292, 1331, 1471 |
| BspMAI | CTGCAG | 1 cut(s) | 841 |
| BspT104I | TTCGAA | 1 cut(s) | 550 |
| BspT107I | GGYRCC | 1 cut(s) | 1290 |
| BsrDI | GCAATG | 1 cut(s) | 325 |
| BsrI | ACTGG | 5 cut(s) | 230, 545, 892, 1331, 1471 |
| BssMI | GATC | 3 cut(s) | 1065, 1378, 1518 |
| BssNI | GRCGYC | 1 cut(s) | 1291 |
| BssT1I | CCWWGG | 4 cut(s) | 1115, 1317, 1402, 1457 |
| Bst2UI | CCWGG | 4 cut(s) | 1219, 1288, 1362, 1502 |
| Bst4CI | ACNGT | 2 cut(s) | 28, 482 |
| BstACI | GRCGYC | 1 cut(s) | 1291 |
| BstBI | TTCGAA | 1 cut(s) | 550 |
| BstC8I | GCNNGC | 2 cut(s) | 414, 721 |
| BstDEI | CTNAG | 8 cut(s) | 95, 143, 205, 333, 778, 819, 909, 1154 |
| BstDSI | CCRYGG | 1 cut(s) | 1125 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 252 |
| BstF5I | GGATG | 4 cut(s) | 234, 334, 829, 1086 |
| BstFNI | CGCG | 1 cut(s) | 1230 |
| BstH2I | RGCGCY | 6 cut(s) | 1212, 1253, 1294, 1355, 1424, 1495 |
| BstHHI | GCGC | 9 cut(s) | 589, 1211, 1252, 1293, 1324, 1354, 1423, 1464, 1494 |
| BstKTI | GATC | 3 cut(s) | 1068, 1381, 1521 |
| BstMAI | GTCTC | 2 cut(s) | 12, 146 |
| BstMBI | GATC | 3 cut(s) | 1065, 1378, 1518 |
| BstNI | CCWGG | 4 cut(s) | 1219, 1288, 1362, 1502 |
| BstNSI | RCATGY | 1 cut(s) | 180 |
| BstSCI | CCNGG | 7 cut(s) | 424, 562, 1139, 1217, 1286, 1360, 1500 |
| BstSFI | CTRYAG | 2 cut(s) | 837, 1020 |
| BstSLI | GKGCMC | 1 cut(s) | 1203 |
| BstUI | CGCG | 1 cut(s) | 1230 |
| BstV1I | GCAGC | 5 cut(s) | 194, 1018, 1021, 1024, 1027 |
| BsuI | GTATCC | 1 cut(s) | 355 |
| BsuRI | GGCC | 5 cut(s) | 1201, 1222, 1365, 1407, 1505 |
| BtgI | CCRYGG | 1 cut(s) | 1125 |
| BtgZI | GCGATG | 1 cut(s) | 1173 |
| BtsCI | GGATG | 4 cut(s) | 234, 334, 829, 1086 |
| BtsIMutI | CAGTG | 4 cut(s) | 223, 538, 1324, 1464 |
| Cac8I | GCNNGC | 2 cut(s) | 414, 721 |
| CfoI | GCGC | 9 cut(s) | 589, 1211, 1252, 1293, 1324, 1354, 1423, 1464, 1494 |
| Cfr13I | GGNCC | 9 cut(s) | 990, 1199, 1200, 1221, 1329, 1364, 1406, 1469, 1504 |
| CseI | GACGC | 1 cut(s) | 1381 |
| Csp6I | GTAC | 2 cut(s) | 87, 507 |
| CviAII | CATG | 4 cut(s) | 177, 238, 665, 1135 |
| CviQI | GTAC | 2 cut(s) | 87, 507 |
| DdeI | CTNAG | 8 cut(s) | 95, 143, 205, 333, 778, 819, 909, 1154 |
| DinI | GGCGCC | 1 cut(s) | 1292 |
| DpnI | GATC | 3 cut(s) | 1067, 1380, 1520 |
| DpnII | GATC | 3 cut(s) | 1065, 1378, 1518 |
| Eco130I | CCWWGG | 4 cut(s) | 1115, 1317, 1402, 1457 |
| Eco24I | GRGCYC | 1 cut(s) | 1203 |
| Eco47I | GGWCC | 3 cut(s) | 990, 1329, 1469 |
| Eco47III | AGCGCT | 1 cut(s) | 1422 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 252 |
| EcoO109I | RGGNCCY | 4 cut(s) | 1200, 1221, 1364, 1504 |
| EcoRII | CCWGG | 4 cut(s) | 1217, 1286, 1360, 1500 |
| EcoT14I | CCWWGG | 4 cut(s) | 1115, 1317, 1402, 1457 |
| EcoT22I | ATGCAT | 1 cut(s) | 1006 |
| EcoT38I | GRGCYC | 1 cut(s) | 1203 |
| EgeI | GGCGCC | 1 cut(s) | 1292 |
| EheI | GGCGCC | 1 cut(s) | 1292 |
| ErhI | CCWWGG | 4 cut(s) | 1115, 1317, 1402, 1457 |
| FaeI | CATG | 4 cut(s) | 180, 241, 668, 1138 |
| FatI | CATG | 4 cut(s) | 176, 237, 664, 1134 |
| FauI | CCCGC | 2 cut(s) | 227, 1235 |
| Fnu4HI | GCNGC | 5 cut(s) | 183, 1032, 1035, 1038, 1041 |
| FokI | GGATG | 4 cut(s) | 241, 341, 836, 1093 |
| FriOI | GRGCYC | 1 cut(s) | 1203 |
| Fsp4HI | GCNGC | 5 cut(s) | 183, 1032, 1035, 1038, 1041 |
| FspBI | CTAG | 7 cut(s) | 275, 728, 1107, 1253, 1382, 1424, 1522 |
| GlaI | GCGC | 9 cut(s) | 588, 1210, 1251, 1292, 1323, 1353, 1422, 1463, 1493 |
| GluI | GCNGC | 5 cut(s) | 183, 1032, 1035, 1038, 1041 |
| GsaI | CCCAGC | 6 cut(s) | 1241, 1262, 1336, 1412, 1433, 1476 |
| GsuI | CTGGAG | 1 cut(s) | 1401 |
| HaeII | RGCGCY | 6 cut(s) | 1212, 1253, 1294, 1355, 1424, 1495 |
| HaeIII | GGCC | 5 cut(s) | 1201, 1222, 1365, 1407, 1505 |
| HgaI | GACGC | 1 cut(s) | 1381 |
| HhaI | GCGC | 9 cut(s) | 589, 1211, 1252, 1293, 1324, 1354, 1423, 1464, 1494 |
| Hin1I | GRCGYC | 1 cut(s) | 1291 |
| Hin1II | CATG | 4 cut(s) | 180, 241, 668, 1138 |
| Hin6I | GCGC | 9 cut(s) | 587, 1209, 1250, 1291, 1322, 1352, 1421, 1462, 1492 |
| HinP1I | GCGC | 9 cut(s) | 587, 1209, 1250, 1291, 1322, 1352, 1421, 1462, 1492 |
| HindIII | AAGCTT | 2 cut(s) | 410, 875 |
| HinfI | GANTC | 4 cut(s) | 99, 244, 713, 776 |
| HphI | GGTGA | 1 cut(s) | 22 |
| Hpy166II | GTNNAC | 2 cut(s) | 422, 701 |
| Hpy188I | TCNGA | 8 cut(s) | 56, 98, 336, 781, 910, 923, 1371, 1511 |
| Hpy8I | GTNNAC | 2 cut(s) | 422, 701 |
| Hpy99I | CGWCG | 3 cut(s) | 1375, 1451, 1515 |
| HpyAV | CCTTC | 3 cut(s) | 311, 319, 929 |
| HpyCH4III | ACNGT | 2 cut(s) | 28, 482 |
| HpyCH4IV | ACGT | 2 cut(s) | 418, 1449 |
| HpyCH4V | TGCA | 9 cut(s) | 153, 182, 416, 503, 647, 719, 839, 1004, 1043 |
| HpyF3I | CTNAG | 8 cut(s) | 95, 143, 205, 333, 778, 819, 909, 1154 |
| HpySE526I | ACGT | 2 cut(s) | 418, 1449 |
| Hsp92I | GRCGYC | 1 cut(s) | 1291 |
| Hsp92II | CATG | 4 cut(s) | 180, 241, 668, 1138 |
| HspAI | GCGC | 9 cut(s) | 587, 1209, 1250, 1291, 1322, 1352, 1421, 1462, 1492 |
| KasI | GGCGCC | 1 cut(s) | 1290 |
| Kzo9I | GATC | 3 cut(s) | 1065, 1378, 1518 |
| LmnI | GCTCC | 1 cut(s) | 1216 |
| Lsp1109I | GCAGC | 5 cut(s) | 194, 1018, 1021, 1024, 1027 |
| LweI | GCATC | 3 cut(s) | 319, 340, 634 |
| MaeI | CTAG | 7 cut(s) | 275, 728, 1107, 1253, 1382, 1424, 1522 |
| MaeII | ACGT | 2 cut(s) | 418, 1449 |
| MaeIII | GTNAC | 4 cut(s) | 28, 577, 848, 883 |
| MalI | GATC | 3 cut(s) | 1067, 1380, 1520 |
| MboI | GATC | 3 cut(s) | 1065, 1378, 1518 |
| MboII | GAAGA | 1 cut(s) | 722 |
| MhlI | GDGCHC | 2 cut(s) | 237, 1203 |
| Mly113I | GGCGCC | 1 cut(s) | 1291 |
| MlyI | GAGTC | 3 cut(s) | 93, 238, 770 |
| MmeI | TCCRAC | 3 cut(s) | 63, 1171, 1394 |
| Mph1103I | ATGCAT | 1 cut(s) | 1006 |
| MseI | TTAA | 5 cut(s) | 171, 294, 441, 468, 1071 |
| MslI | CAYNNNNRTG | 1 cut(s) | 652 |
| MspR9I | CCNGG | 7 cut(s) | 426, 564, 1141, 1219, 1288, 1362, 1502 |
| Mva1269I | GAATGC | 1 cut(s) | 1004 |
| MvaI | CCWGG | 4 cut(s) | 1219, 1288, 1362, 1502 |
| MvnI | CGCG | 1 cut(s) | 1230 |
| NarI | GGCGCC | 1 cut(s) | 1291 |
| NciI | CCSGG | 3 cut(s) | 426, 564, 1141 |
| NdeII | GATC | 3 cut(s) | 1065, 1378, 1518 |
| NlaIII | CATG | 4 cut(s) | 180, 241, 668, 1138 |
| NlaIV | GGNNCC | 4 cut(s) | 1201, 1292, 1331, 1471 |
| NmuCI | GTSAC | 3 cut(s) | 28, 848, 883 |
| NsiI | ATGCAT | 1 cut(s) | 1006 |
| NspI | RCATGY | 1 cut(s) | 180 |
| NspV | TTCGAA | 1 cut(s) | 550 |
| OliI | CACNNNNGTG | 1 cut(s) | 652 |
| PctI | GAATGC | 1 cut(s) | 1004 |
| PfeI | GAWTC | 1 cut(s) | 713 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 229, 458, 540 |
| PkrI | GCNGC | 5 cut(s) | 184, 1033, 1036, 1039, 1042 |
| PleI | GAGTC | 3 cut(s) | 93, 238, 770 |
| PluTI | GGCGCC | 1 cut(s) | 1294 |
| PpsI | GAGTC | 3 cut(s) | 93, 238, 770 |
| PshBI | ATTAAT | 1 cut(s) | 1071 |
| Psp6I | CCWGG | 4 cut(s) | 1217, 1286, 1360, 1500 |
| PspFI | CCCAGC | 6 cut(s) | 1237, 1258, 1332, 1408, 1429, 1472 |
| PspGI | CCWGG | 4 cut(s) | 1217, 1286, 1360, 1500 |
| PspN4I | GGNNCC | 4 cut(s) | 1201, 1292, 1331, 1471 |
| PspOMI | GGGCCC | 1 cut(s) | 1199 |
| PspPI | GGNCC | 9 cut(s) | 990, 1199, 1200, 1221, 1329, 1364, 1406, 1469, 1504 |
| PstI | CTGCAG | 1 cut(s) | 841 |
| RsaI | GTAC | 2 cut(s) | 88, 508 |
| RsaNI | GTAC | 2 cut(s) | 87, 507 |
| RseI | CAYNNNNRTG | 1 cut(s) | 652 |
| SaqAI | TTAA | 5 cut(s) | 171, 294, 441, 468, 1071 |
| SatI | GCNGC | 5 cut(s) | 183, 1032, 1035, 1038, 1041 |
| Sau3AI | GATC | 3 cut(s) | 1065, 1378, 1518 |
| Sau96I | GGNCC | 9 cut(s) | 990, 1199, 1200, 1221, 1329, 1364, 1406, 1469, 1504 |
| ScaI | AGTACT | 1 cut(s) | 508 |
| SchI | GAGTC | 3 cut(s) | 93, 238, 770 |
| ScrFI | CCNGG | 7 cut(s) | 426, 564, 1141, 1219, 1288, 1362, 1502 |
| SduI | GDGCHC | 2 cut(s) | 237, 1203 |
| SfaNI | GCATC | 3 cut(s) | 319, 340, 634 |
| SfcI | CTRYAG | 2 cut(s) | 837, 1020 |
| SfoI | GGCGCC | 1 cut(s) | 1292 |
| SfuI | TTCGAA | 1 cut(s) | 550 |
| SinI | GGWCC | 3 cut(s) | 990, 1329, 1469 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 652 |
| SmlI | CTYRAG | 1 cut(s) | 252 |
| SmoI | CTYRAG | 1 cut(s) | 252 |
| SpeI | ACTAGT | 1 cut(s) | 274 |
| SsiI | CCGC | 3 cut(s) | 21, 220, 1228 |
| SspDI | GGCGCC | 1 cut(s) | 1290 |
| SspMI | CTAG | 7 cut(s) | 275, 728, 1107, 1253, 1382, 1424, 1522 |
| StyD4I | CCNGG | 7 cut(s) | 424, 562, 1139, 1217, 1286, 1360, 1500 |
| StyI | CCWWGG | 4 cut(s) | 1115, 1317, 1402, 1457 |
| TaaI | ACNGT | 2 cut(s) | 28, 482 |
| TaiI | ACGT | 2 cut(s) | 421, 1452 |
| TaqI | TCGA | 9 cut(s) | 550, 1275, 1282, 1306, 1313, 1377, 1446, 1453, 1517 |
| TatI | WGTACW | 1 cut(s) | 506 |
| TfiI | GAWTC | 1 cut(s) | 713 |
| Tru1I | TTAA | 5 cut(s) | 171, 294, 441, 468, 1071 |
| Tru9I | TTAA | 5 cut(s) | 171, 294, 441, 468, 1071 |
| TscAI | CASTG | 4 cut(s) | 230, 545, 1331, 1471 |
| TseFI | GTSAC | 3 cut(s) | 28, 848, 883 |
| TseI | GCWGC | 5 cut(s) | 182, 1031, 1034, 1037, 1040 |
| Tsp45I | GTSAC | 3 cut(s) | 28, 848, 883 |
| TspDTI | ATGAA | 5 cut(s) | 17, 411, 723, 997, 1070 |
| TspGWI | ACGGA | 1 cut(s) | 1380 |
| TspRI | CASTG | 4 cut(s) | 230, 545, 1331, 1471 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 229, 458, 540 |
| VpaK11BI | GGWCC | 3 cut(s) | 990, 1329, 1469 |
| VspI | ATTAAT | 1 cut(s) | 1071 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 252 |
| XceI | RCATGY | 1 cut(s) | 180 |
| XspI | CTAG | 7 cut(s) | 275, 728, 1107, 1253, 1382, 1424, 1522 |
| ZrmI | AGTACT | 1 cut(s) | 508 |
| Zsp2I | ATGCAT | 1 cut(s) | 1006 |