RLG00000032514

Belongs to the AAA ATPase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0006921
Physical Location & Seq
Reverse (-)
15995548 .. 16000869
5322 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000032514

Sequence Viewer

Length: 2640 bp
ATGCACAAGTGGCTTTACTTCCACAGTGACAGCAAAAAAGTATTCAAGCTCTCTGAGGAGAAATCCGAATCCGAATCCTCCTTCGAGTATAATGCCATCACCTGCAGAGCCCACAGCGCTTCGCTCACTGATTTTGGAGGAGTAGGAGACGGCAAAACATCAAACACAAAGGCCTTTCAAGCCGCAATCAACCACCTGACCACTTCACTCTTTACCTCCACAAAGAGGCTGTTCTCCTCACTTCTCAAGACCCCCAAGAATGGCCGGTGCTCAAAACCACTCCCGTCTTACGGCAGAGGAAGGGATGCACCAGGTGGACGCTACGCCAGCCTCATATTCGGCACCAACCTCACCGACGTCGTCATCACCGGAGACAACTGCACAATCGACGGTCAAGGTGAATTCTGGTGTAGCAAATTCCATAATAAAAAGTTACAGTACACCCGCCCGTACCTGATAGAGATCATGTTCTCCACCAACGTGCAAATATCTCATCTCACTCTTTTGAACTCTCCGTCATGGAATGTACATCCCATTTACAGCAGCAATATACTAGTGCAAGGATTGACCATCATAGCTCCGGTGAGGTCTTCGAACACAGATGGAATTAATCCGGATTCATGCATAAACGTCAAGATTGAGGACTGTTACATTGTCTCCGGCGACGACTGCGTGGCCGTCAAGAGCGGTTGGGACCAGTACGGCGTGTCGTTTGGTATGCCAACCAAGCAACTAATGATCAGACAACTTACTTGTGTTTCGCCTTACAGCGCCGCCATTGCATTGGGCAGTGAGATGTCCGGCGGGATTGAAGACGTCAGAGCAGAAGACATCGCGGCCGTTGATAGGGAATCCGGGGTGAGGATCAAGACAGCTGTAGGGCGAGGAGGGTACGTGAGGGACGTGTACTTAAGGAGAATGGAAATGCACACCATGAAGTGGGCGTTTAGGATGAGTGGCGATTATGGGTCACACGCTGACGATGGCTGTGACAAGAAGGCGTTTCCTGAGATCAAAGGGATTCACTACAGGGATGTGGTGGCTGATAATGTGACAATGGCAGCGAAACTGGAGGGGATTGCTGGCCATCCGTTTACGGGGATTTGCATGTCGAATGTGACAGTTGGATTGGCTGCTAAAGCAAAGAAGCAGCCGTGGAGCTGTGCTGATATTGAGGGGGTTGCAAGTGGCGTGACGCCGACACCGTGTGATTTGCTACATGGTGATGATCCGAGTCAGGGTGATGTTGCTACCAGTGGCTGTGATTTTCCTATGGATGTTGTACCAATTGACATGGTGGAGATGAAAAGATACTGCAGAAGACTGAAGCTGGGATCAAATGTCCTGAGATTGGTCTTGCTTGGCCTTGTTTTATATCATGGATTCTCTGAAAAGTATACCTGCTTTGACATCAAAATGGTTATCAGCTTGCGTCTCTATGAATACCATGGTATGAGTAGTCGGAATCAACTTTTCGGTGCTTTGGAGCTTTACTTGCAGAACAAGATCAGCCCCTCCACTCGACTTCTCAAAATTGCACAAACTCGGAAAGACGGTATTTTCAGCACCCACTTTTCAGATAGGCAAGAGTTTGAGGATGTGTATGAAGATATTCAGCTCAAGTGGAAGTTCAATATCATATCTAAGGAGTCCAATCATCCTTCTTTAGCATCCAAGAGAAAGCAATACTTCGAGCTTATATTTGACTTAGAACACAAGGAAAAGGTCATGAATTCTTACTTGCCTTATGTTTTGGAGAGATTTAAGGTCATGAAGGAGGAAAGAAAGCTTGTCAAGCTGCATACCCTTGCAAGGTTAGATCCCTTTAAAATCAAATGGGATGCAATCATTCTCGAACACCCTGCAACGTTTGAAACTTTAGCCATGGATTTGGAGCTGAAGACAGCTGTTTTGGAGGATTTGGAAAAGTTTGTTAAGAGGAAAGAGTTCTATCAAAAAGTGGGAAGGGCTTGGAAGCGAGGGTATCTTTTATATGGTCCTCCAGGCACTGGTAAATCGTCGCTAGTAGCTGCCATAGCTAATTACCTCAAGTTTGATATCTATGATTTGCAGCTCACACATTTGAAATCAGATATGGAATTGAGAAAAGCATTGATTGCAACAACAAATAAATCTATACTTGTGATTGAGGATATTGATTGTAGTCAGGCGGAGCTACAAGATCGAAACTATGGTAAGGGCAGTAAGAAAAATGAGTCTGAAGGCCAGCAGATTACGCTATCTGGATTACTAAACTTCACAGATGGCCTGTGGTCTAGTTGTGGAGAAGAAAGAATCTTCATATTCACTACCAATCACAAGAGCAAACTAGACCCTGCATTGCTGCGATCAGGACGAATGGACATGCACATCCACATGTCGTATTGCTCGTATGAGGGCTTCAAAACATTGGCCTCAAATTACTTGGGAATTTGTGGACATCACCCCTTGTTTGAGAAGATTGAAAGCCTACTGAAAAATACTAAGGTCACTCCTGCACAAGTCGCTGAGGCGCTAATGAAGAGTGAGGATGCTGAAGTAGCACTCCAGGGTCTGATCACTCTGCTAAATGAAAAGAGATACAGGGGAGATGAGTACCGAGATGAAGGTGAAGACGAGCATTTAACATATTTTATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA AAA_assoc

Protein Analysis

880

Amino Acids

98.97

Weight (kDa)

7.76

Isoelectric Point (pI)

40.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_28 PF00295 111 - 392 5.4e-35 Glycosyl hydrolases family 28
AAA_assoc PF14363 474 - 544 1.1e-11 Domain associated at C-terminal with AAA
AAA PF00004 662 - 794 1.8e-20 ATPase family associated with various cellular activities (AAA)
AAA_lid_At3g28540 PF25568 796 - 860 4.8e-23 At3g28540-like, AAA+ ATPase lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 110
AatII GACGTC 2 cut(s) 360, 819
Acc36I ACCTGC 2 cut(s) 110, 1409
AccB1I GGYRCC 1 cut(s) 341
AccB7I CCANNNNNTGG 2 cut(s) 939, 2009
AccBSI CCGCTC 1 cut(s) 687
AccI GTMKAC 1 cut(s) 1397
AccII CGCG 1 cut(s) 836
AccIII TCCGGA 1 cut(s) 613
AciI CCGC 7 cut(s) 183, 445, 687, 774, 804, 836, 2171
AclI AACGTT 1 cut(s) 1868
AclWI GGATC 4 cut(s) 872, 1223, 1342, 1814
AcoI YGGCCR 4 cut(s) 262, 675, 837, 1084
AcsI RAATTY 4 cut(s) 401, 416, 1732, 2430
AcuI CTGAAG 4 cut(s) 1346, 1919, 2241, 2556
AcyI GRCGYC 3 cut(s) 357, 816, 1196
AdeI CACNNNGTG 2 cut(s) 314, 1208
AfaI GTAC 8 cut(s) 440, 452, 528, 701, 893, 908, 1284, 2597
AfeI AGCGCT 1 cut(s) 118
AflII CTTAAG 1 cut(s) 910
AflIII ACRYGT 2 cut(s) 903, 2376
AgsI TTSAA 9 cut(s) 46, 179, 508, 812, 1633, 1874, 2086, 2404, 2465
AhlI ACTAGT 1 cut(s) 553
AjiI CACGTC 1 cut(s) 904
AjnI CCWGG 3 cut(s) 310, 2002, 2547
AleI CACNNNNGTG 1 cut(s) 479
Alw21I GWGCWC 1 cut(s) 272
Alw26I GTCTC 4 cut(s) 141, 366, 661, 1439
AlwI GGATC 4 cut(s) 872, 1223, 1342, 1814
AlwNI CAGNNNCTG 3 cut(s) 1260, 2009, 2554
Aor13HI TCCGGA 1 cut(s) 613
Aor51HI AGCGCT 1 cut(s) 118
AoxI GGCC 9 cut(s) 171, 262, 675, 837, 1084, 1363, 2224, 2266, 2412
ApeKI GCWGC 8 cut(s) 543, 1061, 1133, 1150, 1798, 2030, 2071, 2344
ApoI RAATTY 4 cut(s) 401, 416, 1732, 2430
ArsI GACNNNNNNTTYG 2 cut(s) 1894, 1926
AseI ATTAAT 1 cut(s) 609
Asp700I GAANNNNTTC 2 cut(s) 1611, 1946
AspLEI GCGC 3 cut(s) 119, 773, 2515
AspS9I GGNCC 2 cut(s) 694, 1997
AsuC2I CCSGG 1 cut(s) 856
AsuII TTCGAA 1 cut(s) 593
AvaII GGWCC 2 cut(s) 694, 1997
BalI TGGCCA 1 cut(s) 1086
BanI GGYRCC 1 cut(s) 341
BanII GRGCYC 1 cut(s) 112
BarI GAAGNNNNNNTAC 2 cut(s) 2384, 2416
BbsI GAAGAC 6 cut(s) 582, 819, 834, 1327, 1907, 2619
Bbv12I GWGCWC 1 cut(s) 272
BbvCI CCTCAGC 1 cut(s) 2508
BbvI GCAGC 8 cut(s) 555, 1073, 1120, 1162, 1785, 2017, 2083, 2331
BccI CCATC 6 cut(s) 104, 578, 596, 977, 1095, 2258
BceAI ACGGC 6 cut(s) 166, 307, 662, 718, 824, 1138
BcgI CGANNNNNNTGC 4 cut(s) 74, 108, 1844, 1878
BciT130I CCWGG 3 cut(s) 312, 2004, 2549
BclI TGATCA 2 cut(s) 738, 2556
BcnI CCSGG 1 cut(s) 856
BcoDI GTCTC 4 cut(s) 141, 366, 661, 1439
BcuI ACTAGT 1 cut(s) 553
BfaI CTAG 4 cut(s) 554, 2024, 2277, 2330
BfmI CTRYAG 4 cut(s) 103, 876, 1027, 1315
BfoI RGCGCY 3 cut(s) 120, 774, 2516
BfrI CTTAAG 1 cut(s) 910
BfuAI ACCTGC 2 cut(s) 110, 1409
Bme1390I CCNGG 4 cut(s) 312, 856, 2004, 2549
Bme18I GGWCC 2 cut(s) 694, 1997
BmgBI CACGTC 1 cut(s) 904
BmgT120I GGNCC 2 cut(s) 694, 1997
BmiI GGNNCC 2 cut(s) 343, 695
BmrFI CCNGG 4 cut(s) 312, 856, 2004, 2549
BmsI GCATC 4 cut(s) 295, 1679, 1831, 2521
BpiI GAAGAC 6 cut(s) 582, 819, 834, 1327, 1907, 2619
BpmI CTGGAG 3 cut(s) 1091, 1986, 2531
Bpu10I CCTNAGC 1 cut(s) 2508
Bpu14I TTCGAA 1 cut(s) 593
BpuEI CTTGAG 3 cut(s) 230, 1604, 2033
BpuMI CCSGG 1 cut(s) 856
BsaAI YACGTR 1 cut(s) 895
BsaBI GATNNNNATC 1 cut(s) 461
BsaHI GRCGYC 3 cut(s) 357, 816, 1196
BsaJI CCNNGG 5 cut(s) 855, 1154, 1447, 1884, 2548
BsaWI WCCGGW 3 cut(s) 368, 580, 613
BsaXI ACNNNNNCTCC 4 cut(s) 641, 671, 879, 909
Bse118I RCCGGY 1 cut(s) 264
Bse1I ACTGG 4 cut(s) 697, 1074, 1254, 2014
Bse3DI GCAATG 2 cut(s) 777, 2339
Bse8I GATNNNNATC 1 cut(s) 461
BseAI TCCGGA 1 cut(s) 613
BseBI CCWGG 3 cut(s) 312, 2004, 2549
BseDI CCNNGG 5 cut(s) 855, 1154, 1447, 1884, 2548
BseJI GATNNNNATC 1 cut(s) 461
BseMI GCAATG 2 cut(s) 777, 2339
BseMII CTCAG 4 cut(s) 45, 999, 1337, 2499
BseNI ACTGG 4 cut(s) 697, 1074, 1254, 2014
BseRI GAGGAG 4 cut(s) 71, 153, 226, 900
BseX3I CGGCCG 1 cut(s) 837
BseXI GCAGC 8 cut(s) 555, 1073, 1120, 1162, 1785, 2017, 2083, 2331
BseYI CCCAGC 1 cut(s) 1330
BsgI GTGCAG 2 cut(s) 364, 2481
Bsh1236I CGCG 1 cut(s) 836
Bsh1285I CGRYCG 1 cut(s) 840
BshFI GGCC 9 cut(s) 173, 264, 677, 839, 1086, 1365, 2226, 2268, 2414
BshNI GGYRCC 1 cut(s) 341
BsiEI CGRYCG 1 cut(s) 840
BsiHKAI GWGCWC 1 cut(s) 272
BsiSI CCGG 7 cut(s) 265, 369, 581, 614, 660, 801, 855
BslFI GGGAC 2 cut(s) 707, 914
BsmAI GTCTC 4 cut(s) 141, 366, 661, 1439
BsmBI CGTCTC 2 cut(s) 141, 1439
BsmFI GGGAC 2 cut(s) 707, 914
BsnI GGCC 9 cut(s) 173, 264, 677, 839, 1086, 1365, 2226, 2268, 2414
Bsp119I TTCGAA 1 cut(s) 593
Bsp1286I GDGCHC 2 cut(s) 112, 272
Bsp13I TCCGGA 1 cut(s) 613
Bsp1407I TGTACA 1 cut(s) 526
Bsp19I CCATGG 2 cut(s) 1447, 1884
BspACI CCGC 7 cut(s) 183, 445, 687, 774, 804, 836, 2171
BspANI GGCC 9 cut(s) 173, 264, 677, 839, 1086, 1365, 2226, 2268, 2414
BspCNI CTCAG 4 cut(s) 46, 1000, 1338, 2500
BspEI TCCGGA 1 cut(s) 613
BspFNI CGCG 1 cut(s) 836
BspHI TCATGA 2 cut(s) 1728, 1770
BspLI GGNNCC 2 cut(s) 343, 695
BspMAI CTGCAG 2 cut(s) 107, 1319
BspMI ACCTGC 2 cut(s) 110, 1409
BspPI GGATC 4 cut(s) 872, 1223, 1342, 1814
BspT104I TTCGAA 1 cut(s) 593
BspT107I GGYRCC 1 cut(s) 341
BspTI CTTAAG 1 cut(s) 910
BsrBI CCGCTC 1 cut(s) 687
BsrDI GCAATG 2 cut(s) 777, 2339
BsrFI RCCGGY 1 cut(s) 264
BsrGI TGTACA 1 cut(s) 526
BsrI ACTGG 4 cut(s) 697, 1074, 1254, 2014
BssAI RCCGGY 1 cut(s) 264
BssECI CCNNGG 5 cut(s) 855, 1154, 1447, 1884, 2548
BssNAI GTATAC 1 cut(s) 1398
BssNI GRCGYC 3 cut(s) 357, 816, 1196
BssT1I CCWWGG 2 cut(s) 1447, 1884
Bst1107I GTATAC 1 cut(s) 1398
Bst2UI CCWGG 3 cut(s) 312, 2004, 2549
Bst4CI ACNGT 7 cut(s) 26, 392, 438, 647, 1123, 1206, 1556
Bst6I CTCTTC 1 cut(s) 2516
BstACI GRCGYC 3 cut(s) 357, 816, 1196
BstAFI CTTAAG 1 cut(s) 910
BstAPI GCANNNNNTGC 1 cut(s) 2117
BstAUI TGTACA 1 cut(s) 526
BstBAI YACGTR 1 cut(s) 895
BstBI TTCGAA 1 cut(s) 593
BstC8I GCNNGC 4 cut(s) 328, 1084, 1430, 2228
BstDEI CTNAG 7 cut(s) 54, 1008, 1346, 1644, 1708, 2484, 2508
BstDSI CCRYGG 3 cut(s) 1154, 1447, 1884
BstFNI CGCG 1 cut(s) 836
BstH2I RGCGCY 3 cut(s) 120, 774, 2516
BstHHI GCGC 3 cut(s) 119, 773, 2515
BstMAI GTCTC 4 cut(s) 141, 366, 661, 1439
BstMCI CGRYCG 1 cut(s) 840
BstNI CCWGG 3 cut(s) 312, 2004, 2549
BstNSI RCATGY 3 cut(s) 1111, 2368, 2380
BstSCI CCNGG 4 cut(s) 310, 854, 2002, 2547
BstSFI CTRYAG 4 cut(s) 103, 876, 1027, 1315
BstUI CGCG 1 cut(s) 836
BstV1I GCAGC 8 cut(s) 555, 1073, 1120, 1162, 1785, 2017, 2083, 2331
BstV2I GAAGAC 6 cut(s) 582, 819, 834, 1327, 1907, 2619
BstX2I RGATCY 1 cut(s) 1819
BstXI CCANNNNNNTGG 2 cut(s) 784, 1891
BstYI RGATCY 1 cut(s) 1819
BstZ17I GTATAC 1 cut(s) 1398
BstZI CGGCCG 1 cut(s) 837
BsuRI GGCC 9 cut(s) 173, 264, 677, 839, 1086, 1365, 2226, 2268, 2414
BtgI CCRYGG 3 cut(s) 1154, 1447, 1884
BtgZI GCGATG 1 cut(s) 817
BtrI CACGTC 1 cut(s) 904
BtsI GCAGTG 1 cut(s) 796
BtsIMutI CAGTG 5 cut(s) 31, 126, 796, 1261, 2007
BveI ACCTGC 2 cut(s) 110, 1409
Cac8I GCNNGC 4 cut(s) 328, 1084, 1430, 2228
CaiI CAGNNNCTG 3 cut(s) 1260, 2009, 2554
CciI TCATGA 2 cut(s) 1728, 1770
CfoI GCGC 3 cut(s) 119, 773, 2515
Cfr10I RCCGGY 1 cut(s) 264
Cfr13I GGNCC 2 cut(s) 694, 1997
CseI GACGC 3 cut(s) 327, 1204, 1421
CsiI ACCWGGT 1 cut(s) 310
Csp6I GTAC 8 cut(s) 439, 451, 527, 700, 892, 907, 1283, 2596
CviQI GTAC 8 cut(s) 439, 451, 527, 700, 892, 907, 1283, 2596
DdeI CTNAG 7 cut(s) 54, 1008, 1346, 1644, 1708, 2484, 2508
DraI TTTAAA 1 cut(s) 1828
DraIII CACNNNGTG 2 cut(s) 314, 1208
EaeI YGGCCR 4 cut(s) 262, 675, 837, 1084
EagI CGGCCG 1 cut(s) 837
Eam1104I CTCTTC 1 cut(s) 2516
EarI CTCTTC 1 cut(s) 2516
EciI GGCGGA 1 cut(s) 2186
EclXI CGGCCG 1 cut(s) 837
Eco130I CCWWGG 2 cut(s) 1447, 1884
Eco147I AGGCCT 1 cut(s) 173
Eco24I GRGCYC 1 cut(s) 112
Eco32I GATATC 1 cut(s) 2059
Eco47I GGWCC 2 cut(s) 694, 1997
Eco47III AGCGCT 1 cut(s) 118
Eco52I CGGCCG 1 cut(s) 837
Eco57I CTGAAG 4 cut(s) 1346, 1919, 2241, 2556
EcoRI GAATTC 2 cut(s) 401, 1732
EcoRII CCWGG 3 cut(s) 310, 2002, 2547
EcoRV GATATC 1 cut(s) 2059
EcoT14I CCWWGG 2 cut(s) 1447, 1884
EcoT22I ATGCAT 1 cut(s) 626
EcoT38I GRGCYC 1 cut(s) 112
ErhI CCWWGG 2 cut(s) 1447, 1884
Esp3I CGTCTC 2 cut(s) 141, 1439
FalI AAGNNNNNCTT 2 cut(s) 1673, 1705
FaqI GGGAC 2 cut(s) 707, 914
FauI CCCGC 2 cut(s) 452, 797
FbaI TGATCA 2 cut(s) 738, 2556
FblI GTMKAC 1 cut(s) 1397
FriOI GRGCYC 1 cut(s) 112
FspBI CTAG 4 cut(s) 554, 2024, 2277, 2330
GlaI GCGC 3 cut(s) 118, 772, 2514
GsaI CCCAGC 1 cut(s) 1334
GsuI CTGGAG 3 cut(s) 1091, 1986, 2531
HaeII RGCGCY 3 cut(s) 120, 774, 2516
HaeIII GGCC 9 cut(s) 173, 264, 677, 839, 1086, 1365, 2226, 2268, 2414
HapII CCGG 7 cut(s) 265, 369, 581, 614, 660, 801, 855
HgaI GACGC 3 cut(s) 327, 1204, 1421
HhaI GCGC 3 cut(s) 119, 773, 2515
Hin1I GRCGYC 3 cut(s) 357, 816, 1196
Hin6I GCGC 3 cut(s) 117, 771, 2513
HinP1I GCGC 3 cut(s) 117, 771, 2513
HindIII AAGCTT 1 cut(s) 1787
HpaII CCGG 7 cut(s) 265, 369, 581, 614, 660, 801, 855
Hpy166II GTNNAC 6 cut(s) 317, 441, 907, 1095, 1398, 2438
Hpy8I GTNNAC 6 cut(s) 317, 441, 907, 1095, 1398, 2438
Hpy99I CGWCG 5 cut(s) 359, 362, 392, 668, 2023
HpyAV CCTTC 8 cut(s) 91, 294, 991, 1671, 1768, 1959, 2216, 2600
HpyCH4III ACNGT 7 cut(s) 26, 392, 438, 647, 1123, 1206, 1556
HpyCH4IV ACGT 7 cut(s) 357, 480, 630, 816, 894, 903, 1868
HpyF3I CTNAG 7 cut(s) 54, 1008, 1346, 1644, 1708, 2484, 2508
HpySE526I ACGT 7 cut(s) 357, 480, 630, 816, 894, 903, 1868
Hsp92I GRCGYC 3 cut(s) 357, 816, 1196
HspAI GCGC 3 cut(s) 117, 771, 2513
Kpn2I TCCGGA 1 cut(s) 613
Ksp22I TGATCA 2 cut(s) 738, 2556
LmnI GCTCC 5 cut(s) 583, 1158, 1486, 1894, 2173
Lsp1109I GCAGC 8 cut(s) 555, 1073, 1120, 1162, 1785, 2017, 2083, 2331
LweI GCATC 4 cut(s) 295, 1679, 1831, 2521
MabI ACCWGGT 1 cut(s) 310
MaeI CTAG 4 cut(s) 554, 2024, 2277, 2330
MaeII ACGT 7 cut(s) 357, 480, 630, 816, 894, 903, 1868
MaeIII GTNAC 9 cut(s) 26, 432, 647, 969, 989, 1051, 1117, 1192, 2488
MbiI CCGCTC 1 cut(s) 687
MfeI CAATTG 1 cut(s) 1287
MflI RGATCY 1 cut(s) 1819
MhlI GDGCHC 2 cut(s) 112, 272
MlsI TGGCCA 1 cut(s) 1086
MluNI TGGCCA 1 cut(s) 1086
MlyI GAGTC 3 cut(s) 1243, 1658, 2225
MmeI TCCRAC 2 cut(s) 1105, 1442
Mox20I TGGCCA 1 cut(s) 1086
Mph1103I ATGCAT 1 cut(s) 626
MroI TCCGGA 1 cut(s) 613
MroXI GAANNNNTTC 2 cut(s) 1611, 1946
MscI TGGCCA 1 cut(s) 1086
MseI TTAA 6 cut(s) 609, 911, 1764, 1827, 1935, 2624
MslI CAYNNNNRTG 4 cut(s) 479, 1224, 1415, 2375
Msp20I TGGCCA 1 cut(s) 1086
MspA1I CMGCKG 2 cut(s) 875, 1907
MspCI CTTAAG 1 cut(s) 910
MspI CCGG 7 cut(s) 265, 369, 581, 614, 660, 801, 855
MspR9I CCNGG 4 cut(s) 312, 856, 2004, 2549
MunI CAATTG 1 cut(s) 1287
MvaI CCWGG 3 cut(s) 312, 2004, 2549
MvnI CGCG 1 cut(s) 836
NciI CCSGG 1 cut(s) 856
NcoI CCATGG 2 cut(s) 1447, 1884
NlaIV GGNNCC 2 cut(s) 343, 695
NmuCI GTSAC 7 cut(s) 26, 969, 989, 1051, 1117, 1192, 2488
NsiI ATGCAT 1 cut(s) 626
NspI RCATGY 3 cut(s) 1111, 2368, 2380
NspV TTCGAA 1 cut(s) 593
OliI CACNNNNGTG 1 cut(s) 479
PagI TCATGA 2 cut(s) 1728, 1770
PaqCI CACCTGC 1 cut(s) 110
PceI AGGCCT 1 cut(s) 173
PciI ACATGT 1 cut(s) 2376
PcsI WCGNNNNNNNCGW 3 cut(s) 900, 1202, 2387
PdmI GAANNNNTTC 2 cut(s) 1611, 1946
PfeI GAWTC 8 cut(s) 68, 74, 617, 851, 1021, 1383, 1465, 2295
PflFI GACNNNGTC 1 cut(s) 359
PflMI CCANNNNNTGG 2 cut(s) 939, 2009
PleI GAGTC 3 cut(s) 1242, 1657, 2224
PpsI GAGTC 3 cut(s) 1242, 1657, 2224
Ppu21I YACGTR 1 cut(s) 895
PscI ACATGT 1 cut(s) 2376
PshBI ATTAAT 1 cut(s) 609
Psp1406I AACGTT 1 cut(s) 1868
Psp6I CCWGG 3 cut(s) 310, 2002, 2547
PspFI CCCAGC 1 cut(s) 1330
PspGI CCWGG 3 cut(s) 310, 2002, 2547
PspN4I GGNNCC 2 cut(s) 343, 695
PspPI GGNCC 2 cut(s) 694, 1997
PstI CTGCAG 2 cut(s) 107, 1319
PstNI CAGNNNCTG 3 cut(s) 1260, 2009, 2554
PsuI RGATCY 1 cut(s) 1819
PsyI GACNNNGTC 1 cut(s) 359
PvuII CAGCTG 2 cut(s) 875, 1907
RsaI GTAC 8 cut(s) 440, 452, 528, 701, 893, 908, 1284, 2597
RsaNI GTAC 8 cut(s) 439, 451, 527, 700, 892, 907, 1283, 2596
RseI CAYNNNNRTG 4 cut(s) 479, 1224, 1415, 2375
SaqAI TTAA 6 cut(s) 609, 911, 1764, 1827, 1935, 2624
Sau96I GGNCC 2 cut(s) 694, 1997
SchI GAGTC 3 cut(s) 1243, 1658, 2225
ScrFI CCNGG 4 cut(s) 312, 856, 2004, 2549
SduI GDGCHC 2 cut(s) 112, 272
SexAI ACCWGGT 1 cut(s) 310
SfaNI GCATC 4 cut(s) 295, 1679, 1831, 2521
SfcI CTRYAG 4 cut(s) 103, 876, 1027, 1315
SfuI TTCGAA 1 cut(s) 593
SinI GGWCC 2 cut(s) 694, 1997
SmiMI CAYNNNNRTG 4 cut(s) 479, 1224, 1415, 2375
SmlI CTYRAG 4 cut(s) 245, 910, 1619, 2048
SmoI CTYRAG 4 cut(s) 245, 910, 1619, 2048
SpeI ACTAGT 1 cut(s) 553
SseBI AGGCCT 1 cut(s) 173
SsiI CCGC 7 cut(s) 183, 445, 687, 774, 804, 836, 2171
SspMI CTAG 4 cut(s) 554, 2024, 2277, 2330
StuI AGGCCT 1 cut(s) 173
StyD4I CCNGG 4 cut(s) 310, 854, 2002, 2547
StyI CCWWGG 2 cut(s) 1447, 1884
TaaI ACNGT 7 cut(s) 26, 392, 438, 647, 1123, 1206, 1556
TaiI ACGT 7 cut(s) 360, 483, 633, 819, 897, 906, 1871
TaqI TCGA 8 cut(s) 84, 387, 593, 1112, 1522, 1692, 1854, 2185
TatI WGTACW 3 cut(s) 438, 526, 906
TauI GCSGC 3 cut(s) 185, 776, 839
TfiI GAWTC 8 cut(s) 68, 74, 617, 851, 1021, 1383, 1465, 2295
Tru1I TTAA 6 cut(s) 609, 911, 1764, 1827, 1935, 2624
Tru9I TTAA 6 cut(s) 609, 911, 1764, 1827, 1935, 2624
TscAI CASTG 5 cut(s) 31, 133, 796, 1261, 2014
TseFI GTSAC 7 cut(s) 26, 969, 989, 1051, 1117, 1192, 2488
TseI GCWGC 8 cut(s) 543, 1061, 1133, 1150, 1798, 2030, 2071, 2344
Tsp45I GTSAC 7 cut(s) 26, 969, 989, 1051, 1117, 1192, 2488
TspGWI ACGGA 2 cut(s) 504, 1080
TspRI CASTG 5 cut(s) 31, 133, 796, 1261, 2014
Tth111I GACNNNGTC 1 cut(s) 359
Van91I CCANNNNNTGG 2 cut(s) 939, 2009
Vha464I CTTAAG 1 cut(s) 910
VpaK11BI GGWCC 2 cut(s) 694, 1997
VspI ATTAAT 1 cut(s) 609
XapI RAATTY 4 cut(s) 401, 416, 1732, 2430
XceI RCATGY 3 cut(s) 1111, 2368, 2380
XmiI GTMKAC 1 cut(s) 1397
XmnI GAANNNNTTC 2 cut(s) 1611, 1946
XspI CTAG 4 cut(s) 554, 2024, 2277, 2330
ZraI GACGTC 2 cut(s) 358, 817
Zsp2I ATGCAT 1 cut(s) 626
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.