Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002087.1

Orthogroup ID

OG0006921

Physical Location & Seq

Genomic Coordinates Forward (+)

29886 .. 35169

Gene Structure 5284 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002087.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2535 bp

atgcagtacttaatccaacccattatgagacttcttcatccaatcacccatgcattctccaaaagccgatcatcagctgatgaactcatgatcatgcaaattgaagaataccatggcatgagcactcataataaagtgttcgaagcttcagagctttacttgcacaacaagatgagcccttccactagactcctcaaaattgtacaaactcagaaagagactaagtttgccatccatttctcaaacaaccaagagtttgaagacatttatgaaggagtccagctgaaatggaaatacaattccaaatccaagaagtccaattatcctagcaaagcagggaaaaagcagcaattctttgagctcagatttgatgtcaaacacaaggaaaaggtcatggatgcttacttgccttatgttgtagagacattcaaggctatgaaagatgcaggaaagattgtcaagctgcatacacttgtaaggtcagaggattacaaagtaagatggagtgcaatcaatttcgaacaccctgcaacattcgagaccatagccatggattctgagcagaagagatcggttttggaggatttggacaggtttgttaagaggaaagagttctatcaaagagtaggaagggcttggaaaagggggtatctactttatggtcctccagggactggtaaatcatcccttataggtgctattgctaattatctgaagtttgatatttatgacttgcaactcacgcatttgatgtcggatatggaattaagaagagtgttgctggcaacaacaaataaatccatacttgtgattgaggatatagattgtagtcaattgaagctgcaagatagaaagaacagcaataagaaaaatgactcagaaagcaatcagctttcgctattgggacgactactgaacttcacagatggcctgtggtatagttgtggagaagagagaatcattatattcactaccagtcacaagagcaaactagaccctgcattgctgcgttcaggaagaatggacatgcacgtccacatgtcgtattgctcatatgagggcttcaaaacattggcctcaaattacctaggcatcaaggaacaccaacctttgtttgatgagattgaaagcctactgcagaagacagaggtcactcctgcacaagtggccgaggagctgatgaagagtgagattgctgatgttgcactccaagctttgatcacagggataaaggaaatgaataaaagggaggaagatgaaaaaaaggccaaagatgaagagaaagttaagaacgataaagagaaggttgatcataaacacagcaatatactagtgcaaggattgaccatcatagctccggtgaggtctccgaacacagatggaattaatccggattcatgcacaaacgtcaagattgaggactgttacattgtctccggcgacgactgcgtggccgtcaagagcggttgggaccagtacggcgtgtcgttgggtatgccaaccaagcaactagtgatcagacgacttacttgtgtttcgccttacagcgccgccattgcattgggcagcgagatgtccggcgggattgaagacgtcagagcagaagacatcgtggccattgatacggaatccggggtgaggatcaagacagctgtagggcgaggagggtacgtgagggacgtgtacttaaggagaatggaaatgcacaccatgaagtgggcgtttaggatgagtggcgattatgggtcacacgctgacgatggctatgacaagaaggcgtttcctgagatcaaagggattcactacagggatgtggtggctgataatgtgacgatggcggcgaaactggaggggattgctggccatccgtttacggggatttgcatgtcgaatgtgacagttggattggttgccaaggcaaagaagcagccgtggagctgtgctgatattgagggggttgcaagcggcgtgacgccgacaccgtgtgatttgctacacggcgatgatccgagtcagggtgatgttgctagtggtggctgtgattttcctgtggatgttgtaccaattgacatggtggagatgaaaagatgtaggtatgatagtaggatgaagtcgcctctttcatctcctagtcgttctaggagtccaagttcgtctgatcaggaccctgcggacaaggatccagctccgagtccatcatcattaggagggcacgagcttgagcactactattcgacaccgccaaaaccagctgatgatgatgatgataacgtgacgtcagaatcaccatcaacaagtttcgctgggcctgatgcaccttatgacattcatggtggacgatcatcatcaaaaggaaagcccaaaaaatggaagccgaagcggtcaccaccacctcctccttctcctgctgctcctgcgccattgcctcctaagaataatgcaagcgccgctgctgagatgggtactgttggggctcggtttggcttcggttttggttgcgttcttctggccatcatgaacaatcacatgtattaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA AAA_assoc

Protein Analysis

844

Amino Acids

94.21

Weight (kDa)

6.95

Isoelectric Point (pI)

58.2

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006921)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g12400 FvH4_3g12400 FvH4_3g12400 FvH4_3g12400 FvH4_3g12402
malus_domestica	MD05G1250600.v1.1
prunus_persica	Prupe.4G113000_v2.0.a1
pyrus_communis	pycom05g22850
rosa_chinensis	RchiOBHm_Chr5g0020271 RchiOBHm_Chr5g0020291
rosa_laevigata	RLG00000032514 RLG00000032515
rosa_multiflora	Rmu_sc0002087.1_g000006 Rmu_sc0002087.1_g000007
rosa_roxburghii	Rroxscaffold_1G00057930 Rroxscaffold_1G00057940
rosa_rugosa	Rorug05G0058100 Rorug05G0058200 Rorug05G0058300
rosa_samantha	Rh5AG148600 Rh5AG148700 Rh5BG148100 Rh5CG159500 Rh5CG159800
rosa_wichuraiana	Rw5G013150 Rw5G013170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1031
AatII	GACGTC	2 cut(s)	1596, 2279
AccB7I	CCANNNNNTGG	3 cut(s)	674, 1716, 2367
AccBSI	CCGCTC	1 cut(s)	1464
AccIII	TCCGGA	1 cut(s)	1390
AciI	CCGC	9 cut(s)	1464, 1551, 1581, 1838, 1965, 2171, 2240, 2380, 2448
AclWI	GGATC	4 cut(s)	1649, 2000, 2174, 2187
AcoI	YGGCCR	5 cut(s)	1167, 1452, 1614, 1861, 2508
AcuI	CTGAAG	2 cut(s)	132, 734
AcyI	GRCGYC	3 cut(s)	1593, 1973, 2276
AdeI	CACNNNGTG	1 cut(s)	1985
AfaI	GTAC	7 cut(s)	8, 204, 1478, 1670, 1685, 2061, 2464
AfiI	CCNNNNNNNGG	6 cut(s)	674, 1638, 1716, 1874, 2015, 2367
AflII	CTTAAG	1 cut(s)	1687
AflIII	ACRYGT	3 cut(s)	1038, 1680, 2526
AgsI	TTSAA	7 cut(s)	104, 260, 430, 838, 1066, 1127, 1589
AhlI	ACTAGT	2 cut(s)	1330, 1510
AjiI	CACGTC	2 cut(s)	1033, 1681
AjnI	CCWGG	1 cut(s)	667
AloI	GAACNNNNNNTCC	2 cut(s)	2134, 2166
Alw21I	GWGCWC	3 cut(s)	125, 363, 2226
Alw26I	GTCTC	6 cut(s)	22, 212, 416, 533, 1371, 1438
AlwI	GGATC	4 cut(s)	1649, 2000, 2174, 2187
AlwNI	CAGNNNCTG	1 cut(s)	674
Aor13HI	TCCGGA	1 cut(s)	1390
AoxI	GGCC	9 cut(s)	928, 1074, 1167, 1266, 1452, 1614, 1861, 2306, 2508
ApeKI	GCWGC	8 cut(s)	346, 463, 841, 1006, 1566, 1927, 2408, 2450
AseI	ATTAAT	1 cut(s)	1386
Asp700I	GAANNNNTTC	1 cut(s)	611
AspA2I	CCTAGG	1 cut(s)	1087
AspLEI	GCGC	3 cut(s)	1550, 2419, 2447
AspS9I	GGNCC	4 cut(s)	662, 1471, 2164, 2306
AsuC2I	CCSGG	1 cut(s)	1633
AsuHPI	GGTGA	6 cut(s)	37, 1372, 1648, 2030, 2277, 2376
AsuII	TTCGAA	2 cut(s)	141, 519
AvaII	GGWCC	3 cut(s)	662, 1471, 2164
AvrII	CCTAGG	1 cut(s)	1087
BaeGI	GKGCMC	1 cut(s)	2214
BalI	TGGCCA	3 cut(s)	1616, 1863, 2510
BamHI	GGATCC	1 cut(s)	2179
BanII	GRGCYC	3 cut(s)	179, 363, 2476
BauI	CACGAG	1 cut(s)	2213
BbsI	GAAGAC	4 cut(s)	267, 1148, 1596, 1611
Bbv12I	GWGCWC	3 cut(s)	125, 363, 2226
BbvI	GCAGC	8 cut(s)	358, 450, 828, 993, 1578, 1939, 2395, 2437
BceAI	ACGGC	4 cut(s)	1439, 1495, 1915, 2014
BcgI	CGANNNNNNTGC	2 cut(s)	509, 543
BciT130I	CCWGG	1 cut(s)	669
BclI	TGATCA	5 cut(s)	90, 1218, 1309, 1515, 2158
BcnI	CCSGG	1 cut(s)	1633
BcoDI	GTCTC	6 cut(s)	22, 212, 416, 533, 1371, 1438
BcuI	ACTAGT	2 cut(s)	1330, 1510
BfaI	CTAG	9 cut(s)	186, 327, 992, 1088, 1331, 1511, 2028, 2130, 2139
BfmI	CTRYAG	3 cut(s)	1136, 1653, 1804
BfoI	RGCGCY	2 cut(s)	1551, 2448
BfrI	CTTAAG	1 cut(s)	1687
BlnI	CCTAGG	1 cut(s)	1087
BmcAI	AGTACT	1 cut(s)	8
Bme1390I	CCNGG	2 cut(s)	669, 1633
Bme18I	GGWCC	3 cut(s)	662, 1471, 2164
BmgBI	CACGTC	2 cut(s)	1033, 1681
BmgT120I	GGNCC	4 cut(s)	662, 1471, 2164, 2306
BmiI	GGNNCC	3 cut(s)	1472, 2166, 2181
BmrFI	CCNGG	2 cut(s)	669, 1633
BmsI	GCATC	4 cut(s)	388, 433, 1101, 2302
BoxI	GACNNNNGTC	1 cut(s)	1148
BpiI	GAAGAC	4 cut(s)	267, 1148, 1596, 1611
BpmI	CTGGAG	2 cut(s)	651, 1868
Bpu14I	TTCGAA	2 cut(s)	141, 519
BpuEI	CTTGAG	1 cut(s)	2240
BpuMI	CCSGG	1 cut(s)	1633
BsaAI	YACGTR	1 cut(s)	1672
BsaBI	GATNNNNATC	1 cut(s)	2344
BsaHI	GRCGYC	3 cut(s)	1593, 1973, 2276
BsaI	GGTCTC	2 cut(s)	533, 1371
BsaJI	CCNNGG	8 cut(s)	112, 549, 668, 1087, 1170, 1632, 1914, 1931
BsaWI	WCCGGW	2 cut(s)	1357, 1390
BsaXI	ACNNNNNCTCC	6 cut(s)	1418, 1448, 1656, 1686, 2134, 2164
Bsc4I	CCNNNNNNNGG	6 cut(s)	674, 1638, 1716, 1874, 2015, 2367
Bse1I	ACTGG	4 cut(s)	679, 975, 1474, 1851
Bse3DI	GCAATG	3 cut(s)	1001, 1554, 2420
Bse8I	GATNNNNATC	1 cut(s)	2344
BseAI	TCCGGA	1 cut(s)	1390
BseBI	CCWGG	1 cut(s)	669
BseDI	CCNNGG	8 cut(s)	112, 549, 668, 1087, 1170, 1632, 1914, 1931
BseGI	GGATG	9 cut(s)	37, 231, 403, 683, 1734, 1816, 1864, 2059, 2112
BseJI	GATNNNNATC	1 cut(s)	2344
BseLI	CCNNNNNNNGG	6 cut(s)	674, 1638, 1716, 1874, 2015, 2367
BseMI	GCAATG	3 cut(s)	1001, 1554, 2420
BseMII	CTCAG	6 cut(s)	224, 376, 549, 891, 1776, 2445
BseNI	ACTGG	4 cut(s)	679, 975, 1474, 1851
BseRI	GAGGAG	4 cut(s)	182, 1187, 1677, 2385
BseSI	GKGCMC	1 cut(s)	2214
BseXI	GCAGC	8 cut(s)	358, 450, 828, 993, 1578, 1939, 2395, 2437
BseYI	CCCAGC	1 cut(s)	2303
BsgI	GTGCAG	1 cut(s)	1143
BshFI	GGCC	9 cut(s)	930, 1076, 1169, 1268, 1454, 1616, 1863, 2308, 2510
BsiHKAI	GWGCWC	3 cut(s)	125, 363, 2226
BsiSI	CCGG	5 cut(s)	1358, 1391, 1437, 1578, 1632
BslFI	GGGAC	4 cut(s)	685, 918, 1484, 1691
BslI	CCNNNNNNNGG	6 cut(s)	674, 1638, 1716, 1874, 2015, 2367
BsmAI	GTCTC	6 cut(s)	22, 212, 416, 533, 1371, 1438
BsmFI	GGGAC	4 cut(s)	685, 918, 1484, 1691
BsmI	GAATGC	1 cut(s)	53
BsnI	GGCC	9 cut(s)	930, 1076, 1169, 1268, 1454, 1616, 1863, 2308, 2510
Bso31I	GGTCTC	2 cut(s)	533, 1371
Bsp119I	TTCGAA	2 cut(s)	141, 519
Bsp1286I	GDGCHC	6 cut(s)	125, 179, 363, 2214, 2226, 2476
Bsp13I	TCCGGA	1 cut(s)	1390
Bsp1407I	TGTACA	1 cut(s)	202
Bsp19I	CCATGG	2 cut(s)	112, 549
BspACI	CCGC	9 cut(s)	1464, 1551, 1581, 1838, 1965, 2171, 2240, 2380, 2448
BspANI	GGCC	9 cut(s)	930, 1076, 1169, 1268, 1454, 1616, 1863, 2308, 2510
BspCNI	CTCAG	6 cut(s)	223, 375, 550, 890, 1777, 2446
BspEI	TCCGGA	1 cut(s)	1390
BspHI	TCATGA	2 cut(s)	87, 2514
BspLI	GGNNCC	3 cut(s)	1472, 2166, 2181
BspMAI	CTGCAG	1 cut(s)	1140
BspPI	GGATC	4 cut(s)	1649, 2000, 2174, 2187
BspT104I	TTCGAA	2 cut(s)	141, 519
BspTI	CTTAAG	1 cut(s)	1687
BspTNI	GGTCTC	2 cut(s)	533, 1371
BsrBI	CCGCTC	1 cut(s)	1464
BsrDI	GCAATG	3 cut(s)	1001, 1554, 2420
BsrGI	TGTACA	1 cut(s)	202
BsrI	ACTGG	4 cut(s)	679, 975, 1474, 1851
BssECI	CCNNGG	8 cut(s)	112, 549, 668, 1087, 1170, 1632, 1914, 1931
BssNI	GRCGYC	3 cut(s)	1593, 1973, 2276
BssSI	CACGAG	1 cut(s)	2213
BssT1I	CCWWGG	4 cut(s)	112, 549, 1087, 1914
Bst2BI	CACGAG	1 cut(s)	2213
Bst2UI	CCWGG	1 cut(s)	669
Bst4CI	ACNGT	4 cut(s)	1424, 1900, 1983, 2467
Bst6I	CTCTTC	5 cut(s)	560, 766, 945, 1178, 1272
BstACI	GRCGYC	3 cut(s)	1593, 1973, 2276
BstAFI	CTTAAG	1 cut(s)	1687
BstAUI	TGTACA	1 cut(s)	202
BstBAI	YACGTR	1 cut(s)	1672
BstBI	TTCGAA	2 cut(s)	141, 519
BstC8I	GCNNGC	4 cut(s)	783, 1861, 1963, 2443
BstDEI	CTNAG	8 cut(s)	210, 222, 362, 558, 877, 1785, 2430, 2454
BstDSI	CCRYGG	3 cut(s)	112, 549, 1931
BstEII	GGTNACC	1 cut(s)	2382
BstF5I	GGATG	9 cut(s)	37, 231, 403, 683, 1734, 1816, 1864, 2059, 2112
BstH2I	RGCGCY	2 cut(s)	1551, 2448
BstHHI	GCGC	3 cut(s)	1550, 2419, 2447
BstMAI	GTCTC	6 cut(s)	22, 212, 416, 533, 1371, 1438
BstNI	CCWGG	1 cut(s)	669
BstNSI	RCATGY	4 cut(s)	1030, 1042, 1888, 2530
BstPAI	GACNNNNGTC	1 cut(s)	1148
BstPI	GGTNACC	1 cut(s)	2382
BstSCI	CCNGG	2 cut(s)	667, 1631
BstSFI	CTRYAG	3 cut(s)	1136, 1653, 1804
BstSLI	GKGCMC	1 cut(s)	2214
BstV1I	GCAGC	8 cut(s)	358, 450, 828, 993, 1578, 1939, 2395, 2437
BstV2I	GAAGAC	4 cut(s)	267, 1148, 1596, 1611
BstX2I	RGATCY	1 cut(s)	2179
BstXI	CCANNNNNNTGG	2 cut(s)	550, 1561
BstYI	RGATCY	1 cut(s)	2179
BsuRI	GGCC	9 cut(s)	930, 1076, 1169, 1268, 1454, 1616, 1863, 2308, 2510
BtgI	CCRYGG	3 cut(s)	112, 549, 1931
BtgZI	GCGATG	1 cut(s)	2016
BtrI	CACGTC	2 cut(s)	1033, 1681
BtsCI	GGATG	9 cut(s)	37, 231, 403, 683, 1734, 1816, 1864, 2059, 2112
Cac8I	GCNNGC	4 cut(s)	783, 1861, 1963, 2443
CaiI	CAGNNNCTG	1 cut(s)	674
CciI	TCATGA	2 cut(s)	87, 2514
CfoI	GCGC	3 cut(s)	1550, 2419, 2447
Cfr13I	GGNCC	4 cut(s)	662, 1471, 2164, 2306
CseI	GACGC	1 cut(s)	1981
Csp6I	GTAC	7 cut(s)	7, 203, 1477, 1669, 1684, 2060, 2463
CviQI	GTAC	7 cut(s)	7, 203, 1477, 1669, 1684, 2060, 2463
DdeI	CTNAG	8 cut(s)	210, 222, 362, 558, 877, 1785, 2430, 2454
DraIII	CACNNNGTG	1 cut(s)	1985
DrdI	GACNNNNNNGTC	1 cut(s)	1031
DseDI	GACNNNNNNGTC	1 cut(s)	1031
EaeI	YGGCCR	5 cut(s)	1167, 1452, 1614, 1861, 2508
Eam1104I	CTCTTC	5 cut(s)	560, 766, 945, 1178, 1272
EarI	CTCTTC	5 cut(s)	560, 766, 945, 1178, 1272
Ecl136II	GAGCTC	1 cut(s)	361
Eco130I	CCWWGG	4 cut(s)	112, 549, 1087, 1914
Eco24I	GRGCYC	3 cut(s)	179, 363, 2476
Eco31I	GGTCTC	2 cut(s)	533, 1371
Eco47I	GGWCC	3 cut(s)	662, 1471, 2164
Eco53kI	GAGCTC	1 cut(s)	361
Eco57I	CTGAAG	2 cut(s)	132, 734
Eco91I	GGTNACC	1 cut(s)	2382
EcoICRI	GAGCTC	1 cut(s)	361
EcoO109I	RGGNCCY	1 cut(s)	2164
EcoO65I	GGTNACC	1 cut(s)	2382
EcoRII	CCWGG	1 cut(s)	667
EcoT14I	CCWWGG	4 cut(s)	112, 549, 1087, 1914
EcoT22I	ATGCAT	1 cut(s)	55
EcoT38I	GRGCYC	3 cut(s)	179, 363, 2476
ErhI	CCWWGG	4 cut(s)	112, 549, 1087, 1914
FaqI	GGGAC	4 cut(s)	685, 918, 1484, 1691
FauI	CCCGC	1 cut(s)	1574
FauNDI	CATATG	1 cut(s)	1054
FbaI	TGATCA	5 cut(s)	90, 1218, 1309, 1515, 2158
FokI	GGATG	9 cut(s)	24, 218, 410, 670, 1741, 1823, 1851, 2066, 2119
FriOI	GRGCYC	3 cut(s)	179, 363, 2476
FspBI	CTAG	9 cut(s)	186, 327, 992, 1088, 1331, 1511, 2028, 2130, 2139
GlaI	GCGC	3 cut(s)	1549, 2418, 2446
GsaI	CCCAGC	1 cut(s)	2307
GsuI	CTGGAG	2 cut(s)	651, 1868
HaeII	RGCGCY	2 cut(s)	1551, 2448
HaeIII	GGCC	9 cut(s)	930, 1076, 1169, 1268, 1454, 1616, 1863, 2308, 2510
HapII	CCGG	5 cut(s)	1358, 1391, 1437, 1578, 1632
HgaI	GACGC	1 cut(s)	1981
HhaI	GCGC	3 cut(s)	1550, 2419, 2447
Hin1I	GRCGYC	3 cut(s)	1593, 1973, 2276
Hin6I	GCGC	3 cut(s)	1548, 2417, 2445
HinP1I	GCGC	3 cut(s)	1548, 2417, 2445
HindIII	AAGCTT	2 cut(s)	144, 1212
HpaII	CCGG	5 cut(s)	1358, 1391, 1437, 1578, 1632
HphI	GGTGA	6 cut(s)	37, 1372, 1648, 2030, 2277, 2376
Hpy166II	GTNNAC	4 cut(s)	1036, 1684, 1872, 2336
Hpy8I	GTNNAC	4 cut(s)	1036, 1684, 1872, 2336
Hpy99I	CGWCG	1 cut(s)	1445
HpyAV	CCTTC	6 cut(s)	189, 266, 624, 1297, 1768, 2409
HpyCH4III	ACNGT	4 cut(s)	1424, 1900, 1983, 2467
HpyCH4IV	ACGT	7 cut(s)	1032, 1407, 1593, 1671, 1680, 2271, 2276
HpyF3I	CTNAG	8 cut(s)	210, 222, 362, 558, 877, 1785, 2430, 2454
HpySE526I	ACGT	7 cut(s)	1032, 1407, 1593, 1671, 1680, 2271, 2276
Hsp92I	GRCGYC	3 cut(s)	1593, 1973, 2276
HspAI	GCGC	3 cut(s)	1548, 2417, 2445
Kpn2I	TCCGGA	1 cut(s)	1390
Ksp22I	TGATCA	5 cut(s)	90, 1218, 1309, 1515, 2158
LmnI	GCTCC	5 cut(s)	1174, 1360, 1935, 2191, 2416
Lsp1109I	GCAGC	8 cut(s)	358, 450, 828, 993, 1578, 1939, 2395, 2437
LweI	GCATC	4 cut(s)	388, 433, 1101, 2302
MaeI	CTAG	9 cut(s)	186, 327, 992, 1088, 1331, 1511, 2028, 2130, 2139
MaeII	ACGT	7 cut(s)	1032, 1407, 1593, 1671, 1680, 2271, 2276
MaeIII	GTNAC	9 cut(s)	977, 1150, 1424, 1746, 1828, 1894, 1969, 2272, 2382
MbiI	CCGCTC	1 cut(s)	1464
MfeI	CAATTG	2 cut(s)	833, 2064
MflI	RGATCY	1 cut(s)	2179
MhlI	GDGCHC	6 cut(s)	125, 179, 363, 2214, 2226, 2476
MlsI	TGGCCA	3 cut(s)	1616, 1863, 2510
MluNI	TGGCCA	3 cut(s)	1616, 1863, 2510
MlyI	GAGTC	6 cut(s)	183, 285, 869, 2020, 2152, 2200
MmeI	TCCRAC	3 cut(s)	40, 735, 1882
Mox20I	TGGCCA	3 cut(s)	1616, 1863, 2510
Mph1103I	ATGCAT	1 cut(s)	55
MroI	TCCGGA	1 cut(s)	1390
MroXI	GAANNNNTTC	1 cut(s)	611
MscI	TGGCCA	3 cut(s)	1616, 1863, 2510
MseI	TTAA	7 cut(s)	11, 600, 767, 1287, 1386, 1688, 2533
MslI	CAYNNNNRTG	4 cut(s)	92, 548, 806, 2001
Msp20I	TGGCCA	3 cut(s)	1616, 1863, 2510
MspA1I	CMGCKG	5 cut(s)	77, 283, 1652, 2252, 2450
MspCI	CTTAAG	1 cut(s)	1687
MspI	CCGG	5 cut(s)	1358, 1391, 1437, 1578, 1632
MspR9I	CCNGG	2 cut(s)	669, 1633
MunI	CAATTG	2 cut(s)	833, 2064
Mva1269I	GAATGC	1 cut(s)	53
MvaI	CCWGG	1 cut(s)	669
NciI	CCSGG	1 cut(s)	1633
NcoI	CCATGG	2 cut(s)	112, 549
NdeI	CATATG	1 cut(s)	1054
NlaIV	GGNNCC	3 cut(s)	1472, 2166, 2181
NmeAIII	GCCGAG	1 cut(s)	1195
NmuCI	GTSAC	8 cut(s)	977, 1150, 1746, 1828, 1894, 1969, 2272, 2382
NsiI	ATGCAT	1 cut(s)	55
NspI	RCATGY	4 cut(s)	1030, 1042, 1888, 2530
NspV	TTCGAA	2 cut(s)	141, 519
PagI	TCATGA	2 cut(s)	87, 2514
PciI	ACATGT	2 cut(s)	1038, 2526
PcsI	WCGNNNNNNNCGW	3 cut(s)	1677, 1838, 1979
PctI	GAATGC	1 cut(s)	53
PdmI	GAANNNNTTC	1 cut(s)	611
PfeI	GAWTC	6 cut(s)	554, 957, 1394, 1628, 1798, 2282
PflMI	CCANNNNNTGG	3 cut(s)	674, 1716, 2367
PleI	GAGTC	6 cut(s)	183, 284, 869, 2019, 2151, 2199
PpsI	GAGTC	6 cut(s)	183, 284, 869, 2019, 2151, 2199
Ppu21I	YACGTR	1 cut(s)	1672
PpuMI	RGGWCCY	1 cut(s)	2164
PscI	ACATGT	2 cut(s)	1038, 2526
PshAI	GACNNNNGTC	1 cut(s)	1148
PshBI	ATTAAT	1 cut(s)	1386
Psp124BI	GAGCTC	1 cut(s)	363
Psp5II	RGGWCCY	1 cut(s)	2164
Psp6I	CCWGG	1 cut(s)	667
PspEI	GGTNACC	1 cut(s)	2382
PspFI	CCCAGC	1 cut(s)	2303
PspGI	CCWGG	1 cut(s)	667
PspN4I	GGNNCC	3 cut(s)	1472, 2166, 2181
PspPI	GGNCC	4 cut(s)	662, 1471, 2164, 2306
PspPPI	RGGWCCY	1 cut(s)	2164
PstI	CTGCAG	1 cut(s)	1140
PstNI	CAGNNNCTG	1 cut(s)	674
PsuI	RGATCY	1 cut(s)	2179
PvuII	CAGCTG	4 cut(s)	77, 283, 1652, 2252
RsaI	GTAC	7 cut(s)	8, 204, 1478, 1670, 1685, 2061, 2464
RsaNI	GTAC	7 cut(s)	7, 203, 1477, 1669, 1684, 2060, 2463
RseI	CAYNNNNRTG	4 cut(s)	92, 548, 806, 2001
SacI	GAGCTC	1 cut(s)	363
SaqAI	TTAA	7 cut(s)	11, 600, 767, 1287, 1386, 1688, 2533
Sau96I	GGNCC	4 cut(s)	662, 1471, 2164, 2306
ScaI	AGTACT	1 cut(s)	8
SchI	GAGTC	6 cut(s)	183, 285, 869, 2020, 2152, 2200
ScrFI	CCNGG	2 cut(s)	669, 1633
SduI	GDGCHC	6 cut(s)	125, 179, 363, 2214, 2226, 2476
SfaNI	GCATC	4 cut(s)	388, 433, 1101, 2302
SfcI	CTRYAG	3 cut(s)	1136, 1653, 1804
SfuI	TTCGAA	2 cut(s)	141, 519
SinI	GGWCC	3 cut(s)	662, 1471, 2164
SmiMI	CAYNNNNRTG	4 cut(s)	92, 548, 806, 2001
SmlI	CTYRAG	2 cut(s)	1687, 2219
SmoI	CTYRAG	2 cut(s)	1687, 2219
SpeI	ACTAGT	2 cut(s)	1330, 1510
SsiI	CCGC	9 cut(s)	1464, 1551, 1581, 1838, 1965, 2171, 2240, 2380, 2448
SspMI	CTAG	9 cut(s)	186, 327, 992, 1088, 1331, 1511, 2028, 2130, 2139
SstI	GAGCTC	1 cut(s)	363
StyD4I	CCNGG	2 cut(s)	667, 1631
StyI	CCWWGG	4 cut(s)	112, 549, 1087, 1914
TaaI	ACNGT	4 cut(s)	1424, 1900, 1983, 2467
TaiI	ACGT	7 cut(s)	1035, 1410, 1596, 1674, 1683, 2274, 2279
TaqI	TCGA	5 cut(s)	141, 519, 537, 1889, 2234
TatI	WGTACW	3 cut(s)	6, 202, 1683
TauI	GCSGC	4 cut(s)	1553, 1841, 1968, 2450
TfiI	GAWTC	6 cut(s)	554, 957, 1394, 1628, 1798, 2282
Tru1I	TTAA	7 cut(s)	11, 600, 767, 1287, 1386, 1688, 2533
Tru9I	TTAA	7 cut(s)	11, 600, 767, 1287, 1386, 1688, 2533
TseFI	GTSAC	8 cut(s)	977, 1150, 1746, 1828, 1894, 1969, 2272, 2382
TseI	GCWGC	8 cut(s)	346, 463, 841, 1006, 1566, 1927, 2408, 2450
Tsp45I	GTSAC	8 cut(s)	977, 1150, 1746, 1828, 1894, 1969, 2272, 2382
TspGWI	ACGGA	2 cut(s)	1640, 1857
Van91I	CCANNNNNTGG	3 cut(s)	674, 1716, 2367
Vha464I	CTTAAG	1 cut(s)	1687
VpaK11BI	GGWCC	3 cut(s)	662, 1471, 2164
VspI	ATTAAT	1 cut(s)	1386
XceI	RCATGY	4 cut(s)	1030, 1042, 1888, 2530
XmaJI	CCTAGG	1 cut(s)	1087
XmnI	GAANNNNTTC	1 cut(s)	611
XspI	CTAG	9 cut(s)	186, 327, 992, 1088, 1331, 1511, 2028, 2130, 2139
ZraI	GACGTC	2 cut(s)	1594, 2277
ZrmI	AGTACT	1 cut(s)	8
Zsp2I	ATGCAT	1 cut(s)	55

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.