Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0003941

Physical Location & Seq

Genomic Coordinates Forward (+)

28172340 .. 28176559

Gene Structure 4220 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000033502

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1938 bp

ATGGAGTCGCTGCCGTCTCTCCAGAATCCCAAGAAGCGACTGTTTTCCGATACTGTGAGCAGTTGTCCGAGCATGGACGACGACGACGTCGTCTTGATCCCCCCTCCGGTTACTCGGACTCGGAAATCACGCAAAGGCAAAGAGGCTATTGTGCTGGATGTGATTGAAATTGATGATGATGAAGATTCTGACACTGCAGTGTTTATGGATAAGAAGAAGGTTCACAGAAGTAATAAAGTGAAGGCCATAAAATACTCTTCTGATGATTACCTTGATCATCGGGCTAAGGGAGCTGTGGCCAATAGTTTTATTAGTTCTGGTAAGAGTTCTTCCTCAGCATCACACAAGGTTGACTATGGTGATCTTTTTTTGGATGAGATAATCGATGTCGATGAGTATGCCCGACTGCAATCCCATTTTGATAATGTGGAAATTCCTCCCGGAGTAGAAGCACCTATGCCACCTATCCCCTGGTTGTTGAATCCACCTAAGAGTATTGAAACTGCAGTTTCTGGAAGTAGTTCTTTTGATAGAAACTATCAGCAGGCTGCTATGAGTTTTGCCTCAGCATCGCATAATGTGATGGACTTGGATGGTCCCAGTTGTGATGCATCTAATTCCAATGGTGACTATACTGGTCTTTATTTGAACGAGTTTATAGATATCAATGAGTATGCACAAATGATGGCGTATTTTGATGAAATGGATGTTCCTCCTGGAATGGAAGCACCTATCCCACATATTCTCATGTTGTCAGATTTTAGAAGCAGTGAAAAATCAGTTTCTGGAAGTAGTTCAAGCTTGAAGACCCAAAAGGATAGTGTTAGTCACTCTCTTGGGATATCATCATCTTGGAAACTTCCACAAGTTTCCAGCAGTAAAAAGAAACAATCTTATCTGCAACACCAAGGGAGTGCTTCTAGTCTCCCAGTGGGAGCAGAATCATCAGTATTTCAAACACAAACTCAAAACAATGTCTCTGTGATGCCAGTTTCTAGCATAGGTACAGAAAAAACTATGGGGAAGGTAAATGGTTTCAAACAATTTTATACAGTTGAAGATCATTCAGACCATCATTATACTAAGACGAGTCATTTAACAAAGCAGAAGAACTGGGCAAAGAAAATTCAGGAGGAGTGGAAGATCCTGGAGAATGATTTGCCTGATATGATATTCGTTAGAGTTTATGAGACAAGAATGGACCTCTTGAGAGCAGTAATTGTTGGAGCGGAGGGTACTCCTTACCATGATGGTGTCTTTTTCTTTGATGTTTCCTTTCCCAGTGGTTACCCCAATGTGCCACCGCATGTCTACTACCACTCTGGTGGCCTTCGACTAAATCCAAATTTGTATAATTGTGGAAAAGTATGCCTCAGCCTTCTCAACACCTGGTCTGGGGGCAAGCAAGAGATGTGGATCCCTGGTAAGTCAACGATCCTTCAGGTTTTGGTCTCTATACAAGGGCTGATCTTGAATACAGAGCCCTACTTCAATGAGCCTGGATTGGCATCTATGAAGGGTACACCAGGCGTTGAAATGGAATCGAAGAAGTACAATGAGGACACGTTCATCCTATCTCTAAGGACAATGGTGTACATGATGAAGAAGCCTCCAAAGTATTTTGAGGAGTTTGTTATCGGGCATTTCCGCAGTCGTGCTCATGACATTCTAAGTGCATGTAAAGCATATATGGATGGAGCTCAAGTGGGGTGTCTAGTCAAAGGTCAGATTCAGGGCGTTAATGGTAACAAGAGCTGCTCACAGGCGTTTAAAAATTCTGTAGCTGGGTTTTTGCCTACTCTTGTCGAACAGTTTACACAGATTGGTGCCACGGACTGTGAGAAATTTTTACCGCCAACAACAGTCGGGTATAAGCAGAATGGTAGCATGCCTCGGGCTGCAAGACCAACTGTTTCAAAGTGGAAGAAACATTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019899 GO:0031625 GO:0032446 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044389 GO:0044424 GO:0044464 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

UQ_con

Protein Analysis

646

Amino Acids

71.59

Weight (kDa)

6.24

Isoelectric Point (pI)

45.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UQ_con	PF00179	376 - 495	9.2e-21	Ubiquitin-conjugating enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003941)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g20020 FvH4_3g20020 FvH4_3g20020 FvH4_3g20020 FvH4_3g20020 FvH4_3g20020 FvH4_3g20020 FvH4_3g20020 FvH4_3g20020
rosa_chinensis	RchiOBHm_Chr5g0033801 RchiOBHm_Chr5g0033811
rosa_laevigata	RLG00000033502 RLG00000033503
rosa_multiflora	Rmu_co8469003.1_g000001 Rmu_sc0001768.1_g000051 Rmu_sc0001768.1_g000056 Rmu_sc0001768.1_g000059
rosa_roxburghii	Rroxscaffold_1G00046360 Rroxscaffold_1G00046380
rosa_rugosa	Rorug05G0142100 Rorug05G0142100 Rorug05G0142100 Rorug05G0142200 Rorug05G0142400 Rorug05G0142500
rosa_samantha	Rh5AG233300 Rh5AG233400 Rh5BG233800 Rh5BG233900 Rh5CG263700 Rh5CG264000 Rh5DG240700 Rh5DG240800
rosa_wichuraiana	Rw5G021570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	86, 89
AatII	GACGTC	1 cut(s)	90
AccB1I	GGYRCC	1 cut(s)	1826
AccBSI	CCGCTC	1 cut(s)	1229
AccI	GTMKAC	1 cut(s)	1311
AciI	CCGC	4 cut(s)	1229, 1304, 1648, 1853
AclWI	GGATC	5 cut(s)	91, 1138, 1411, 1424, 1429
AcoI	YGGCCR	1 cut(s)	297
AcsI	RAATTY	5 cut(s)	432, 1125, 1345, 1774, 1844
AcuI	CTGAAG	1 cut(s)	1424
AcyI	GRCGYC	1 cut(s)	87
AfaI	GTAC	5 cut(s)	1006, 1237, 1522, 1553, 1595
AfiI	CCNNNNNNNGG	2 cut(s)	106, 1395
AflIII	ACRYGT	1 cut(s)	1563
AjnI	CCWGG	7 cut(s)	470, 715, 1146, 1388, 1420, 1498, 1525
AleI	CACNNNNGTG	2 cut(s)	197, 1323
AluBI	AGCT	5 cut(s)	293, 801, 1700, 1755, 1784
AluI	AGCT	5 cut(s)	293, 801, 1700, 1755, 1784
Alw21I	GWGCWC	2 cut(s)	1660, 1702
Alw26I	GTCTC	5 cut(s)	21, 929, 982, 1184, 1456
AlwI	GGATC	5 cut(s)	91, 1138, 1411, 1424, 1429
AlwNI	CAGNNNCTG	2 cut(s)	512, 785
Ama87I	CYCGRG	1 cut(s)	1893
AoxI	GGCC	3 cut(s)	243, 297, 1327
ApeKI	GCWGC	4 cut(s)	10, 548, 1755, 1898
ApoI	RAATTY	5 cut(s)	432, 1125, 1345, 1774, 1844
Asp700I	GAANNNNTTC	2 cut(s)	520, 793
AspS9I	GGNCC	2 cut(s)	596, 1201
AsuC2I	CCSGG	1 cut(s)	441
AsuHPI	GGTGA	2 cut(s)	371, 638
AvaI	CYCGRG	1 cut(s)	1893
AvaII	GGWCC	2 cut(s)	596, 1201
BalI	TGGCCA	1 cut(s)	299
BamHI	GGATCC	1 cut(s)	1416
BanI	GGYRCC	1 cut(s)	1826
BanII	GRGCYC	2 cut(s)	1485, 1702
BarI	GAAGNNNNNNTAC	2 cut(s)	313, 345
BbsI	GAAGAC	1 cut(s)	812
Bbv12I	GWGCWC	2 cut(s)	1660, 1702
BbvCI	CCTCAGC	3 cut(s)	334, 565, 1373
BbvI	GCAGC	3 cut(s)	535, 1742, 1885
BccI	CCATC	6 cut(s)	577, 587, 679, 1080, 1244, 1688
BcgI	CGANNNNNNTGC	2 cut(s)	380, 414
BciT130I	CCWGG	7 cut(s)	472, 717, 1148, 1390, 1422, 1500, 1527
BclI	TGATCA	1 cut(s)	274
BcnI	CCSGG	1 cut(s)	441
BcoDI	GTCTC	5 cut(s)	21, 929, 982, 1184, 1456
BfaI	CTAG	3 cut(s)	921, 996, 1715
BfmI	CTRYAG	3 cut(s)	195, 504, 1779
BisI	GCNGC	4 cut(s)	11, 549, 1756, 1899
BlsI	GCNGC	4 cut(s)	12, 550, 1757, 1900
Bme1390I	CCNGG	8 cut(s)	441, 472, 717, 1148, 1390, 1422, 1500, 1527
Bme18I	GGWCC	2 cut(s)	596, 1201
BmeT110I	CYCGRG	1 cut(s)	1893
BmgT120I	GGNCC	2 cut(s)	596, 1201
BmiI	GGNNCC	3 cut(s)	598, 1418, 1828
BmrFI	CCNGG	8 cut(s)	441, 472, 717, 1148, 1390, 1422, 1500, 1527
BmrI	ACTGGG	4 cut(s)	594, 923, 1123, 1275
BmsI	GCATC	6 cut(s)	347, 578, 598, 620, 975, 1517
BmuI	ACTGGG	4 cut(s)	594, 923, 1123, 1275
BpiI	GAAGAC	1 cut(s)	812
BpmI	CTGGAG	2 cut(s)	5, 1169
Bpu10I	CCTNAGC	4 cut(s)	285, 334, 565, 1373
BpuEI	CTTGAG	2 cut(s)	1228, 1686
BpuMI	CCSGG	1 cut(s)	441
Bsa29I	ATCGAT	1 cut(s)	384
BsaBI	GATNNNNATC	2 cut(s)	1415, 1507
BsaHI	GRCGYC	1 cut(s)	87
BsaI	GGTCTC	1 cut(s)	1456
BsaJI	CCNNGG	5 cut(s)	470, 907, 1420, 1830, 1892
BsaWI	WCCGGW	1 cut(s)	106
BsaXI	ACNNNNNCTCC	2 cut(s)	1689, 1719
Bsc4I	CCNNNNNNNGG	2 cut(s)	106, 1395
Bse1I	ACTGG	6 cut(s)	600, 640, 929, 989, 1118, 1281
Bse8I	GATNNNNATC	2 cut(s)	1415, 1507
BseBI	CCWGG	7 cut(s)	472, 717, 1148, 1390, 1422, 1500, 1527
BseCI	ATCGAT	1 cut(s)	384
BseDI	CCNNGG	5 cut(s)	470, 907, 1420, 1830, 1892
BseGI	GGATG	6 cut(s)	163, 379, 598, 712, 1569, 1699
BseJI	GATNNNNATC	2 cut(s)	1415, 1507
BseLI	CCNNNNNNNGG	2 cut(s)	106, 1395
BseMII	CTCAG	3 cut(s)	348, 579, 1387
BseNI	ACTGG	6 cut(s)	600, 640, 929, 989, 1118, 1281
BseRI	GAGGAG	2 cut(s)	1148, 1640
BseXI	GCAGC	3 cut(s)	535, 1742, 1885
BseYI	CCCAGC	1 cut(s)	1784
BshFI	GGCC	3 cut(s)	245, 299, 1329
BshNI	GGYRCC	1 cut(s)	1826
BshVI	ATCGAT	1 cut(s)	384
BsiHKAI	GWGCWC	2 cut(s)	1660, 1702
BsiHKCI	CYCGRG	1 cut(s)	1893
BsiSI	CCGG	2 cut(s)	107, 441
BslFI	GGGAC	1 cut(s)	582
BslI	CCNNNNNNNGG	2 cut(s)	106, 1395
BsmAI	GTCTC	5 cut(s)	21, 929, 982, 1184, 1456
BsmBI	CGTCTC	1 cut(s)	21
BsmFI	GGGAC	1 cut(s)	582
BsnI	GGCC	3 cut(s)	245, 299, 1329
Bso31I	GGTCTC	1 cut(s)	1456
BsoBI	CYCGRG	1 cut(s)	1893
Bsp1286I	GDGCHC	3 cut(s)	1485, 1660, 1702
Bsp1407I	TGTACA	1 cut(s)	1593
Bsp143I	GATC	8 cut(s)	96, 274, 361, 1060, 1143, 1416, 1434, 1467
BspACI	CCGC	4 cut(s)	1229, 1304, 1648, 1853
BspANI	GGCC	3 cut(s)	245, 299, 1329
BspCNI	CTCAG	3 cut(s)	347, 578, 1386
BspDI	ATCGAT	1 cut(s)	384
BspHI	TCATGA	1 cut(s)	1660
BspLI	GGNNCC	3 cut(s)	598, 1418, 1828
BspMAI	CTGCAG	2 cut(s)	199, 508
BspPI	GGATC	5 cut(s)	91, 1138, 1411, 1424, 1429
BspT107I	GGYRCC	1 cut(s)	1826
BspTNI	GGTCTC	1 cut(s)	1456
BsrBI	CCGCTC	1 cut(s)	1229
BsrGI	TGTACA	1 cut(s)	1593
BsrI	ACTGG	6 cut(s)	600, 640, 929, 989, 1118, 1281
BssECI	CCNNGG	5 cut(s)	470, 907, 1420, 1830, 1892
BssMI	GATC	8 cut(s)	96, 274, 361, 1060, 1143, 1416, 1434, 1467
BssNI	GRCGYC	1 cut(s)	87
BssT1I	CCWWGG	1 cut(s)	907
Bst2UI	CCWGG	7 cut(s)	472, 717, 1148, 1390, 1422, 1500, 1527
Bst4CI	ACNGT	7 cut(s)	42, 55, 1054, 1812, 1838, 1864, 1912
Bst6I	CTCTTC	1 cut(s)	262
BstACI	GRCGYC	1 cut(s)	87
BstAUI	TGTACA	1 cut(s)	1593
BstC8I	GCNNGC	3 cut(s)	546, 1403, 1889
BstDEI	CTNAG	8 cut(s)	285, 334, 489, 565, 1083, 1373, 1580, 1670
BstDSI	CCRYGG	1 cut(s)	1830
BstEII	GGTNACC	1 cut(s)	1286
BstF5I	GGATG	6 cut(s)	163, 379, 598, 712, 1569, 1699
BstKTI	GATC	8 cut(s)	99, 277, 364, 1063, 1146, 1419, 1437, 1470
BstMAI	GTCTC	5 cut(s)	21, 929, 982, 1184, 1456
BstMBI	GATC	8 cut(s)	96, 274, 361, 1060, 1143, 1416, 1434, 1467
BstMWI	GCNNNNNNNGC	2 cut(s)	290, 1682
BstNI	CCWGG	7 cut(s)	472, 717, 1148, 1390, 1422, 1500, 1527
BstNSI	RCATGY	3 cut(s)	1310, 1680, 1891
BstPI	GGTNACC	1 cut(s)	1286
BstSCI	CCNGG	8 cut(s)	439, 470, 715, 1146, 1388, 1420, 1498, 1525
BstSFI	CTRYAG	3 cut(s)	195, 504, 1779
BstV1I	GCAGC	3 cut(s)	535, 1742, 1885
BstV2I	GAAGAC	1 cut(s)	812
BstX2I	RGATCY	2 cut(s)	1143, 1416
BstXI	CCANNNNNNTGG	1 cut(s)	1325
BstYI	RGATCY	2 cut(s)	1143, 1416
Bsu15I	ATCGAT	1 cut(s)	384
BsuRI	GGCC	3 cut(s)	245, 299, 1329
BsuTUI	ATCGAT	1 cut(s)	384
BtgI	CCRYGG	1 cut(s)	1830
BtgZI	GCGATG	1 cut(s)	555
BtsCI	GGATG	6 cut(s)	163, 379, 598, 712, 1569, 1699
BtsI	GCAGTG	3 cut(s)	192, 204, 775
BtsIMutI	CAGTG	5 cut(s)	192, 204, 775, 936, 1288
Cac8I	GCNNGC	3 cut(s)	546, 1403, 1889
CaiI	CAGNNNCTG	2 cut(s)	512, 785
CciI	TCATGA	1 cut(s)	1660
Cfr13I	GGNCC	2 cut(s)	596, 1201
ClaI	ATCGAT	1 cut(s)	384
CsiI	ACCWGGT	1 cut(s)	1388
Csp6I	GTAC	5 cut(s)	1005, 1236, 1521, 1552, 1594
CspCI	CAANNNNNGTGG	2 cut(s)	1394, 1429
CviAII	CATG	8 cut(s)	73, 748, 1247, 1307, 1597, 1661, 1677, 1888
CviQI	GTAC	5 cut(s)	1005, 1236, 1521, 1552, 1594
DdeI	CTNAG	8 cut(s)	285, 334, 489, 565, 1083, 1373, 1580, 1670
DpnI	GATC	8 cut(s)	98, 276, 363, 1062, 1145, 1418, 1436, 1469
DpnII	GATC	8 cut(s)	96, 274, 361, 1060, 1143, 1416, 1434, 1467
DraI	TTTAAA	1 cut(s)	1771
DrdI	GACNNNNNNGTC	2 cut(s)	86, 89
DseDI	GACNNNNNNGTC	2 cut(s)	86, 89
EaeI	YGGCCR	1 cut(s)	297
Eam1104I	CTCTTC	1 cut(s)	262
EarI	CTCTTC	1 cut(s)	262
Ecl136II	GAGCTC	1 cut(s)	1700
Eco130I	CCWWGG	1 cut(s)	907
Eco24I	GRGCYC	2 cut(s)	1485, 1702
Eco31I	GGTCTC	1 cut(s)	1456
Eco32I	GATATC	2 cut(s)	664, 843
Eco47I	GGWCC	2 cut(s)	596, 1201
Eco53kI	GAGCTC	1 cut(s)	1700
Eco57I	CTGAAG	1 cut(s)	1424
Eco88I	CYCGRG	1 cut(s)	1893
Eco91I	GGTNACC	1 cut(s)	1286
EcoICRI	GAGCTC	1 cut(s)	1700
EcoO65I	GGTNACC	1 cut(s)	1286
EcoRII	CCWGG	7 cut(s)	470, 715, 1146, 1388, 1420, 1498, 1525
EcoRV	GATATC	2 cut(s)	664, 843
EcoT14I	CCWWGG	1 cut(s)	907
EcoT22I	ATGCAT	1 cut(s)	613
EcoT38I	GRGCYC	2 cut(s)	1485, 1702
ErhI	CCWWGG	1 cut(s)	907
Esp3I	CGTCTC	1 cut(s)	21
FaeI	CATG	8 cut(s)	76, 751, 1250, 1310, 1600, 1664, 1680, 1891
FalI	AAGNNNNNCTT	2 cut(s)	508, 540
FaqI	GGGAC	1 cut(s)	582
FatI	CATG	8 cut(s)	72, 747, 1246, 1306, 1596, 1660, 1676, 1887
FbaI	TGATCA	1 cut(s)	274
FblI	GTMKAC	1 cut(s)	1311
Fnu4HI	GCNGC	4 cut(s)	11, 549, 1756, 1899
FokI	GGATG	6 cut(s)	170, 386, 605, 719, 1556, 1706
FriOI	GRGCYC	2 cut(s)	1485, 1702
Fsp4HI	GCNGC	4 cut(s)	11, 549, 1756, 1899
FspBI	CTAG	3 cut(s)	921, 996, 1715
GluI	GCNGC	4 cut(s)	11, 549, 1756, 1899
GsaI	CCCAGC	1 cut(s)	1788
GsuI	CTGGAG	2 cut(s)	5, 1169
HaeIII	GGCC	3 cut(s)	245, 299, 1329
HapII	CCGG	2 cut(s)	107, 441
Hin1I	GRCGYC	1 cut(s)	87
Hin1II	CATG	8 cut(s)	76, 751, 1250, 1310, 1600, 1664, 1680, 1891
HincII	GTYRAC	2 cut(s)	352, 1431
HindII	GTYRAC	2 cut(s)	352, 1431
HindIII	AAGCTT	1 cut(s)	799
HinfI	GANTC	9 cut(s)	5, 25, 118, 185, 481, 941, 1090, 1541, 1729
HpaII	CCGG	2 cut(s)	107, 441
HphI	GGTGA	2 cut(s)	371, 638
Hpy166II	GTNNAC	7 cut(s)	223, 352, 1312, 1431, 1523, 1594, 1815
Hpy188I	TCNGA	9 cut(s)	49, 69, 117, 123, 190, 262, 757, 1069, 1728
Hpy188III	TCNNGA	8 cut(s)	22, 94, 513, 786, 1130, 1207, 1471, 1661
Hpy8I	GTNNAC	7 cut(s)	223, 352, 1312, 1431, 1523, 1594, 1815
Hpy99I	CGWCG	4 cut(s)	83, 86, 89, 92
HpyAV	CCTTC	7 cut(s)	211, 235, 1018, 1340, 1388, 1448, 1510
HpyCH4III	ACNGT	7 cut(s)	42, 55, 1054, 1812, 1838, 1864, 1912
HpyCH4IV	ACGT	2 cut(s)	87, 1565
HpyCH4V	TGCA	8 cut(s)	197, 409, 506, 611, 677, 901, 1676, 1901
HpyF10VI	GCNNNNNNNGC	2 cut(s)	290, 1682
HpyF3I	CTNAG	8 cut(s)	285, 334, 489, 565, 1083, 1373, 1580, 1670
HpySE526I	ACGT	2 cut(s)	87, 1565
Hsp92I	GRCGYC	1 cut(s)	87
Hsp92II	CATG	8 cut(s)	76, 751, 1250, 1310, 1600, 1664, 1680, 1891
Ksp22I	TGATCA	1 cut(s)	274
Kzo9I	GATC	8 cut(s)	96, 274, 361, 1060, 1143, 1416, 1434, 1467
LmnI	GCTCC	4 cut(s)	290, 935, 1226, 1697
Lsp1109I	GCAGC	3 cut(s)	535, 1742, 1885
LweI	GCATC	6 cut(s)	347, 578, 598, 620, 975, 1517
MabI	ACCWGGT	1 cut(s)	1388
MaeI	CTAG	3 cut(s)	921, 996, 1715
MaeII	ACGT	2 cut(s)	87, 1565
MaeIII	GTNAC	5 cut(s)	109, 626, 827, 1286, 1745
MalI	GATC	8 cut(s)	98, 276, 363, 1062, 1145, 1418, 1436, 1469
MbiI	CCGCTC	1 cut(s)	1229
MboI	GATC	8 cut(s)	96, 274, 361, 1060, 1143, 1416, 1434, 1467
MflI	RGATCY	2 cut(s)	1143, 1416
MhlI	GDGCHC	3 cut(s)	1485, 1660, 1702
MlsI	TGGCCA	1 cut(s)	299
MluNI	TGGCCA	1 cut(s)	299
MlyI	GAGTC	3 cut(s)	14, 112, 1099
MmeI	TCCRAC	1 cut(s)	1204
Mox20I	TGGCCA	1 cut(s)	299
Mph1103I	ATGCAT	1 cut(s)	613
MroXI	GAANNNNTTC	2 cut(s)	520, 793
MscI	TGGCCA	1 cut(s)	299
MseI	TTAA	3 cut(s)	1097, 1740, 1770
MslI	CAYNNNNRTG	3 cut(s)	197, 1251, 1323
Msp20I	TGGCCA	1 cut(s)	299
MspI	CCGG	2 cut(s)	107, 441
MspR9I	CCNGG	8 cut(s)	441, 472, 717, 1148, 1390, 1422, 1500, 1527
MvaI	CCWGG	7 cut(s)	472, 717, 1148, 1390, 1422, 1500, 1527
MwoI	GCNNNNNNNGC	2 cut(s)	290, 1682
NciI	CCSGG	1 cut(s)	441
NdeII	GATC	8 cut(s)	96, 274, 361, 1060, 1143, 1416, 1434, 1467
NlaIII	CATG	8 cut(s)	76, 751, 1250, 1310, 1600, 1664, 1680, 1891
NlaIV	GGNNCC	3 cut(s)	598, 1418, 1828
NmuCI	GTSAC	2 cut(s)	626, 827
NsiI	ATGCAT	1 cut(s)	613
NspI	RCATGY	3 cut(s)	1310, 1680, 1891
OliI	CACNNNNGTG	2 cut(s)	197, 1323
PaeI	GCATGC	1 cut(s)	1891
PagI	TCATGA	1 cut(s)	1660
PcsI	WCGNNNNNNNCGW	2 cut(s)	84, 87
PdmI	GAANNNNTTC	2 cut(s)	520, 793
PfeI	GAWTC	6 cut(s)	25, 185, 481, 941, 1541, 1729
PflFI	GACNNNGTC	2 cut(s)	86, 89
PfoI	TCCNGGA	3 cut(s)	439, 715, 1146
PkrI	GCNGC	4 cut(s)	12, 550, 1757, 1900
PleI	GAGTC	3 cut(s)	13, 112, 1098
PpsI	GAGTC	3 cut(s)	13, 112, 1098
Psp124BI	GAGCTC	1 cut(s)	1702
Psp6I	CCWGG	7 cut(s)	470, 715, 1146, 1388, 1420, 1498, 1525
PspEI	GGTNACC	1 cut(s)	1286
PspFI	CCCAGC	1 cut(s)	1784
PspGI	CCWGG	7 cut(s)	470, 715, 1146, 1388, 1420, 1498, 1525
PspN4I	GGNNCC	3 cut(s)	598, 1418, 1828
PspPI	GGNCC	2 cut(s)	596, 1201
PstI	CTGCAG	2 cut(s)	199, 508
PstNI	CAGNNNCTG	2 cut(s)	512, 785
PsuI	RGATCY	2 cut(s)	1143, 1416
PsyI	GACNNNGTC	2 cut(s)	86, 89
RsaI	GTAC	5 cut(s)	1006, 1237, 1522, 1553, 1595
RsaNI	GTAC	5 cut(s)	1005, 1236, 1521, 1552, 1594
RseI	CAYNNNNRTG	3 cut(s)	197, 1251, 1323
SacI	GAGCTC	1 cut(s)	1702
SaqAI	TTAA	3 cut(s)	1097, 1740, 1770
SatI	GCNGC	4 cut(s)	11, 549, 1756, 1899
Sau3AI	GATC	8 cut(s)	96, 274, 361, 1060, 1143, 1416, 1434, 1467
Sau96I	GGNCC	2 cut(s)	596, 1201
SchI	GAGTC	3 cut(s)	14, 112, 1099
ScrFI	CCNGG	8 cut(s)	441, 472, 717, 1148, 1390, 1422, 1500, 1527
SduI	GDGCHC	3 cut(s)	1485, 1660, 1702
SexAI	ACCWGGT	1 cut(s)	1388
SfaNI	GCATC	6 cut(s)	347, 578, 598, 620, 975, 1517
SfcI	CTRYAG	3 cut(s)	195, 504, 1779
SinI	GGWCC	2 cut(s)	596, 1201
SmiMI	CAYNNNNRTG	3 cut(s)	197, 1251, 1323
SmlI	CTYRAG	2 cut(s)	1207, 1701
SmoI	CTYRAG	2 cut(s)	1207, 1701
SphI	GCATGC	1 cut(s)	1891
SsiI	CCGC	4 cut(s)	1229, 1304, 1648, 1853
SspMI	CTAG	3 cut(s)	921, 996, 1715
SstI	GAGCTC	1 cut(s)	1702
StyD4I	CCNGG	8 cut(s)	439, 470, 715, 1146, 1388, 1420, 1498, 1525
StyI	CCWWGG	1 cut(s)	907
TaaI	ACNGT	7 cut(s)	42, 55, 1054, 1812, 1838, 1864, 1912
TaiI	ACGT	2 cut(s)	90, 1568
TaqI	TCGA	5 cut(s)	384, 390, 1333, 1544, 1806
TatI	WGTACW	2 cut(s)	1551, 1593
TfiI	GAWTC	6 cut(s)	25, 185, 481, 941, 1541, 1729
Tru1I	TTAA	3 cut(s)	1097, 1740, 1770
Tru9I	TTAA	3 cut(s)	1097, 1740, 1770
TscAI	CASTG	5 cut(s)	199, 204, 775, 936, 1288
TseFI	GTSAC	2 cut(s)	626, 827
TseI	GCWGC	4 cut(s)	10, 548, 1755, 1898
Tsp45I	GTSAC	2 cut(s)	626, 827
TspDTI	ATGAA	5 cut(s)	195, 714, 1529, 1558, 1616
TspGWI	ACGGA	1 cut(s)	1847
TspRI	CASTG	5 cut(s)	199, 204, 775, 936, 1288
Tth111I	GACNNNGTC	2 cut(s)	86, 89
VpaK11BI	GGWCC	2 cut(s)	596, 1201
XapI	RAATTY	5 cut(s)	432, 1125, 1345, 1774, 1844
XceI	RCATGY	3 cut(s)	1310, 1680, 1891
XcmI	CCANNNNNNNNNTGG	1 cut(s)	468
XmiI	GTMKAC	1 cut(s)	1311
XmnI	GAANNNNTTC	2 cut(s)	520, 793
XspI	CTAG	3 cut(s)	921, 996, 1715
ZraI	GACGTC	1 cut(s)	88
Zsp2I	ATGCAT	1 cut(s)	613

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.