Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0003941

Physical Location & Seq

Genomic Coordinates Reverse (-)

29119887 .. 29124862

Gene Structure 4976 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G021570.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1875 bp

ATGGAGTCGCTGCCGTCTTCCCAGAATCCCAAGAAGCGACTGTTTTCGGATACTGTGAGCAGTTCTCCGAGCATGGACGAGGACGACGTCGTCTTGATTCCCCCTCCGGTTACTCGGACTCGGAAATCACGCAAAGGCAAAGAGGCTATTGTGCCGGATGTGATTGAAATTGATGATGATGAAGATTCTGAAACTGCAGTGTTTATGGATAAGAAGAAGGTTCACAGAAGTAATAAAGTGAAGGCCATAAAATACTCTTCCGATGATTACCTTGATCATCGGGCTAAGGGAGCTGTGGCCAATAGTTTTATTAGTTCTGGTAAGAGTTCTTCCTCAGCATCACACAAGGTTGACTATGGTGATCTTTTTTTGGATGAGATAATCGATGTCGATGAGTATGCCCGACTGCAATCCCATTTTGATAATGTGGAAATTCCTCCTGGAGTAGAAGCACCTATGCCACCTATCCCCTGGTTGTTGAATCCACCTAAGAGTATTGAAACTGCAGTTTCTGGAAGTATTTCTTTTGATAGAAACTATCAGCAGGCTGCTAAGAGTTTTTACTCAGCATCGCATAATGTGATGGACTTAGATGGTCCCAGTTGTGATGCATCTAGTTCCAAGGGTGACTATATTGGTCTTTATTTGAACGAGTTTATAGAAATCAATGAGTATACCCAAATGGCGGCTTATTTTGATGAAATGGATGTTCCTCCTGGAATAGAAGCACCTATCCCACATAGTCTCATGTTGTCAGATTTTAGAAGCAGTGTAAAATCAGTTTCTGGAAGTAGTTCAAGCTTGAAGACCCAAAAGGATAGTGTTAGTCACTCTCTTGGGATATCATCATCTTGGAAACTTCCACAAGTTTCCAGCAGTAAAAAGAAACAATCTTATCTGCAACACCAAGGGAGTGCTTCTAGTCTCCCAGTGGGAGCAGAATCATCAGTATTTCAAACACAAACTCAAAACAATGTCTATGTGAAGCCAGTTTCTAGCATGGATACAGAAAAAACTATGGGGAAGGTAAATGGTTTCAAACAATTTGATACAGTTGAAGATCATTCAGACCATCATTATACTAAGACGAGTCATTTAACAAAGCAGAAGAACTGGGCAAAGAAAATTCAGGAGGAGTGGAAGATCCTGGAGAATGATTTGCCTGATATGATATTCGTTAGAGTTTATGAGACAAGAATGGACCTCTTGAGAGCAGTAATTGTTGGAGCGGAGGGTACTCCTTACCATGATGGTCTCTTTTTCTTTGATATTTCCTTCCCCAGTGTTTATCCCAATGGGCCACCGCATGTCTACTACCACTCTGGTGGCCTTCGACTAAATCCAAATTTGTATGATTGTGGAAAAGTATGCCTCAGCCTTCTCAACACCTGGTCTGGGGGCAAGCAAGAGAAGTGGATCCCTGGTAAGTCAACGATGCTTCAGGTTTTGGTCTCTATACAAGGGCTGATCTTGAATACAGAGCCCTACTTCAATGAGCCTGGATGGGCACCTATGAAGGGTACACCAAGCGGTGAAATGCAATCGAAGAAGTACAATGAGGACACGTTCATCCTATCTCTAAGGACGATGGTGTACATGATGAAGAAGCCTCCAAAGTATTTTGAGGAGTTTGTTATCGGGCATTTCCGCAATCGTGCTCATGACATTCTAAGTGCATGTAAAGCATATATGGATGGAGCTCAAGTGGGGTGTCTAGTCAAAGCTTGCCGCACTATCCTCAAATTGAACCTAGTTCACTTTGATCTTGAGGAGAGTTTGTTGTTGTTGATTATCCTTGGTGTTGTCGCTTTTGATGTAGCCTTGCTTCATTTGTTCAAAACAAGCAACAAGCAACATTATCCTAAATGCTCGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019899 GO:0031625 GO:0032446 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044389 GO:0044424 GO:0044464 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

UQ_con

Protein Analysis

624

Amino Acids

69.78

Weight (kDa)

6.14

Isoelectric Point (pI)

46.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UQ_con	PF00179	376 - 494	1.7e-20	Ubiquitin-conjugating enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003941)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g20020 FvH4_3g20020 FvH4_3g20020 FvH4_3g20020 FvH4_3g20020 FvH4_3g20020 FvH4_3g20020 FvH4_3g20020 FvH4_3g20020
rosa_chinensis	RchiOBHm_Chr5g0033801 RchiOBHm_Chr5g0033811
rosa_laevigata	RLG00000033502 RLG00000033503
rosa_multiflora	Rmu_co8469003.1_g000001 Rmu_sc0001768.1_g000051 Rmu_sc0001768.1_g000056 Rmu_sc0001768.1_g000059
rosa_roxburghii	Rroxscaffold_1G00046360 Rroxscaffold_1G00046380
rosa_rugosa	Rorug05G0142100 Rorug05G0142100 Rorug05G0142100 Rorug05G0142200 Rorug05G0142400 Rorug05G0142500
rosa_samantha	Rh5AG233300 Rh5AG233400 Rh5BG233800 Rh5BG233900 Rh5CG263700 Rh5CG264000 Rh5DG240700 Rh5DG240800
rosa_wichuraiana	Rw5G021570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	89
AatII	GACGTC	1 cut(s)	90
AccB1I	GGYRCC	1 cut(s)	1507
AccBSI	CCGCTC	1 cut(s)	1229
AccI	GTMKAC	2 cut(s)	674, 1311
AciI	CCGC	6 cut(s)	686, 1229, 1304, 1530, 1648, 1729
AclWI	GGATC	3 cut(s)	1138, 1411, 1424
AcoI	YGGCCR	1 cut(s)	297
AcsI	RAATTY	3 cut(s)	432, 1125, 1345
AcuI	CTGAAG	1 cut(s)	1424
AcyI	GRCGYC	1 cut(s)	87
AfaI	GTAC	4 cut(s)	1237, 1522, 1553, 1595
AfiI	CCNNNNNNNGG	3 cut(s)	685, 1395, 1517
AflIII	ACRYGT	1 cut(s)	1563
AjnI	CCWGG	7 cut(s)	439, 470, 715, 1146, 1388, 1420, 1498
AleI	CACNNNNGTG	1 cut(s)	1323
AluBI	AGCT	4 cut(s)	293, 801, 1700, 1724
AluI	AGCT	4 cut(s)	293, 801, 1700, 1724
Alw21I	GWGCWC	2 cut(s)	1660, 1702
Alw26I	GTCTC	5 cut(s)	749, 929, 1184, 1259, 1456
AlwI	GGATC	3 cut(s)	1138, 1411, 1424
AlwNI	CAGNNNCTG	2 cut(s)	512, 785
AoxI	GGCC	4 cut(s)	243, 297, 1298, 1327
ApeKI	GCWGC	2 cut(s)	10, 548
ApoI	RAATTY	3 cut(s)	432, 1125, 1345
Asp700I	GAANNNNTTC	2 cut(s)	520, 793
AspS9I	GGNCC	3 cut(s)	596, 1201, 1298
AsuHPI	GGTGA	3 cut(s)	371, 638, 1544
AvaII	GGWCC	2 cut(s)	596, 1201
BaeGI	GKGCMC	1 cut(s)	1510
BalI	TGGCCA	1 cut(s)	299
BamHI	GGATCC	1 cut(s)	1416
BanI	GGYRCC	1 cut(s)	1507
BanII	GRGCYC	2 cut(s)	1485, 1702
BarI	GAAGNNNNNNTAC	4 cut(s)	313, 345, 1809, 1841
BbsI	GAAGAC	2 cut(s)	9, 812
Bbv12I	GWGCWC	2 cut(s)	1660, 1702
BbvCI	CCTCAGC	2 cut(s)	334, 1373
BbvI	GCAGC	1 cut(s)	535
BccI	CCATC	7 cut(s)	577, 587, 1080, 1244, 1497, 1582, 1688
BcgI	CGANNNNNNTGC	2 cut(s)	380, 414
BciT130I	CCWGG	7 cut(s)	441, 472, 717, 1148, 1390, 1422, 1500
BciVI	GTATCC	2 cut(s)	43, 997
BclI	TGATCA	1 cut(s)	274
BcoDI	GTCTC	5 cut(s)	749, 929, 1184, 1259, 1456
BfaI	CTAG	5 cut(s)	615, 921, 996, 1715, 1751
BfmI	CTRYAG	2 cut(s)	195, 504
BfuI	GTATCC	2 cut(s)	43, 997
BisI	GCNGC	4 cut(s)	11, 549, 687, 1729
BlsI	GCNGC	4 cut(s)	12, 550, 688, 1730
Bme1390I	CCNGG	7 cut(s)	441, 472, 717, 1148, 1390, 1422, 1500
Bme18I	GGWCC	2 cut(s)	596, 1201
BmgT120I	GGNCC	3 cut(s)	596, 1201, 1298
BmiI	GGNNCC	3 cut(s)	598, 1418, 1509
BmrFI	CCNGG	7 cut(s)	441, 472, 717, 1148, 1390, 1422, 1500
BmrI	ACTGGG	4 cut(s)	594, 923, 1123, 1275
BmsI	GCATC	5 cut(s)	347, 578, 598, 620, 1425
BmuI	ACTGGG	4 cut(s)	594, 923, 1123, 1275
BpiI	GAAGAC	2 cut(s)	9, 812
BplI	GAGNNNNNCTC	2 cut(s)	49, 81
BpmI	CTGGAG	2 cut(s)	462, 1169
Bpu10I	CCTNAGC	3 cut(s)	285, 334, 1373
BpuEI	CTTGAG	3 cut(s)	1228, 1686, 1787
Bsa29I	ATCGAT	1 cut(s)	384
BsaHI	GRCGYC	1 cut(s)	87
BsaI	GGTCTC	2 cut(s)	1259, 1456
BsaJI	CCNNGG	5 cut(s)	470, 621, 907, 1420, 1795
BsaWI	WCCGGW	1 cut(s)	106
BsaXI	ACNNNNNCTCC	4 cut(s)	1689, 1719, 1763, 1793
Bsc4I	CCNNNNNNNGG	3 cut(s)	685, 1395, 1517
Bse1I	ACTGG	5 cut(s)	600, 929, 989, 1118, 1281
BseBI	CCWGG	7 cut(s)	441, 472, 717, 1148, 1390, 1422, 1500
BseCI	ATCGAT	1 cut(s)	384
BseDI	CCNNGG	5 cut(s)	470, 621, 907, 1420, 1795
BseGI	GGATG	6 cut(s)	163, 379, 712, 1508, 1569, 1699
BseLI	CCNNNNNNNGG	3 cut(s)	685, 1395, 1517
BseMII	CTCAG	3 cut(s)	348, 579, 1387
BseNI	ACTGG	5 cut(s)	600, 929, 989, 1118, 1281
BseRI	GAGGAG	3 cut(s)	1148, 1640, 1784
BseSI	GKGCMC	1 cut(s)	1510
BseXI	GCAGC	1 cut(s)	535
BshFI	GGCC	4 cut(s)	245, 299, 1300, 1329
BshNI	GGYRCC	1 cut(s)	1507
BshVI	ATCGAT	1 cut(s)	384
BsiHKAI	GWGCWC	2 cut(s)	1660, 1702
BsiSI	CCGG	2 cut(s)	107, 155
BslFI	GGGAC	1 cut(s)	582
BslI	CCNNNNNNNGG	3 cut(s)	685, 1395, 1517
BsmAI	GTCTC	5 cut(s)	749, 929, 1184, 1259, 1456
BsmFI	GGGAC	1 cut(s)	582
BsnI	GGCC	4 cut(s)	245, 299, 1300, 1329
Bso31I	GGTCTC	2 cut(s)	1259, 1456
Bsp1286I	GDGCHC	4 cut(s)	1485, 1510, 1660, 1702
Bsp1407I	TGTACA	1 cut(s)	1593
Bsp143I	GATC	7 cut(s)	274, 361, 1060, 1143, 1416, 1467, 1762
BspACI	CCGC	6 cut(s)	686, 1229, 1304, 1530, 1648, 1729
BspANI	GGCC	4 cut(s)	245, 299, 1300, 1329
BspCNI	CTCAG	3 cut(s)	347, 578, 1386
BspDI	ATCGAT	1 cut(s)	384
BspHI	TCATGA	1 cut(s)	1660
BspLI	GGNNCC	3 cut(s)	598, 1418, 1509
BspMAI	CTGCAG	2 cut(s)	199, 508
BspPI	GGATC	3 cut(s)	1138, 1411, 1424
BspT107I	GGYRCC	1 cut(s)	1507
BspTNI	GGTCTC	2 cut(s)	1259, 1456
BsrBI	CCGCTC	1 cut(s)	1229
BsrGI	TGTACA	1 cut(s)	1593
BsrI	ACTGG	5 cut(s)	600, 929, 989, 1118, 1281
BssECI	CCNNGG	5 cut(s)	470, 621, 907, 1420, 1795
BssMI	GATC	7 cut(s)	274, 361, 1060, 1143, 1416, 1467, 1762
BssNAI	GTATAC	1 cut(s)	675
BssNI	GRCGYC	1 cut(s)	87
BssT1I	CCWWGG	3 cut(s)	621, 907, 1795
Bst1107I	GTATAC	1 cut(s)	675
Bst2UI	CCWGG	7 cut(s)	441, 472, 717, 1148, 1390, 1422, 1500
Bst4CI	ACNGT	3 cut(s)	42, 55, 1054
Bst6I	CTCTTC	1 cut(s)	262
BstACI	GRCGYC	1 cut(s)	87
BstAUI	TGTACA	1 cut(s)	1593
BstC8I	GCNNGC	3 cut(s)	546, 1403, 1726
BstF5I	GGATG	6 cut(s)	163, 379, 712, 1508, 1569, 1699
BstKTI	GATC	7 cut(s)	277, 364, 1063, 1146, 1419, 1470, 1765
BstMAI	GTCTC	5 cut(s)	749, 929, 1184, 1259, 1456
BstMBI	GATC	7 cut(s)	274, 361, 1060, 1143, 1416, 1467, 1762
BstMWI	GCNNNNNNNGC	2 cut(s)	290, 1682
BstNI	CCWGG	7 cut(s)	441, 472, 717, 1148, 1390, 1422, 1500
BstNSI	RCATGY	2 cut(s)	1310, 1680
BstSCI	CCNGG	7 cut(s)	439, 470, 715, 1146, 1388, 1420, 1498
BstSFI	CTRYAG	2 cut(s)	195, 504
BstSLI	GKGCMC	1 cut(s)	1510
BstV1I	GCAGC	1 cut(s)	535
BstV2I	GAAGAC	2 cut(s)	9, 812
BstX2I	RGATCY	2 cut(s)	1143, 1416
BstXI	CCANNNNNNTGG	1 cut(s)	1325
BstYI	RGATCY	2 cut(s)	1143, 1416
BstZ17I	GTATAC	1 cut(s)	675
Bsu15I	ATCGAT	1 cut(s)	384
BsuI	GTATCC	2 cut(s)	43, 997
BsuRI	GGCC	4 cut(s)	245, 299, 1300, 1329
BsuTUI	ATCGAT	1 cut(s)	384
BtgZI	GCGATG	1 cut(s)	555
BtsCI	GGATG	6 cut(s)	163, 379, 712, 1508, 1569, 1699
BtsI	GCAGTG	2 cut(s)	204, 775
BtsIMutI	CAGTG	4 cut(s)	204, 775, 936, 1288
Cac8I	GCNNGC	3 cut(s)	546, 1403, 1726
CaiI	CAGNNNCTG	2 cut(s)	512, 785
CciI	TCATGA	1 cut(s)	1660
Cfr13I	GGNCC	3 cut(s)	596, 1201, 1298
ClaI	ATCGAT	1 cut(s)	384
CsiI	ACCWGGT	1 cut(s)	1388
Csp6I	GTAC	4 cut(s)	1236, 1521, 1552, 1594
CspCI	CAANNNNNGTGG	2 cut(s)	1394, 1429
CviAII	CATG	8 cut(s)	73, 748, 1000, 1247, 1307, 1597, 1661, 1677
CviQI	GTAC	4 cut(s)	1236, 1521, 1552, 1594
DpnI	GATC	7 cut(s)	276, 363, 1062, 1145, 1418, 1469, 1764
DpnII	GATC	7 cut(s)	274, 361, 1060, 1143, 1416, 1467, 1762
DrdI	GACNNNNNNGTC	1 cut(s)	89
DseDI	GACNNNNNNGTC	1 cut(s)	89
EaeI	YGGCCR	1 cut(s)	297
Eam1104I	CTCTTC	1 cut(s)	262
EarI	CTCTTC	1 cut(s)	262
Ecl136II	GAGCTC	1 cut(s)	1700
Eco130I	CCWWGG	3 cut(s)	621, 907, 1795
Eco24I	GRGCYC	2 cut(s)	1485, 1702
Eco31I	GGTCTC	2 cut(s)	1259, 1456
Eco32I	GATATC	1 cut(s)	843
Eco47I	GGWCC	2 cut(s)	596, 1201
Eco53kI	GAGCTC	1 cut(s)	1700
Eco57I	CTGAAG	1 cut(s)	1424
EcoICRI	GAGCTC	1 cut(s)	1700
EcoRII	CCWGG	7 cut(s)	439, 470, 715, 1146, 1388, 1420, 1498
EcoRV	GATATC	1 cut(s)	843
EcoT14I	CCWWGG	3 cut(s)	621, 907, 1795
EcoT22I	ATGCAT	1 cut(s)	613
EcoT38I	GRGCYC	2 cut(s)	1485, 1702
ErhI	CCWWGG	3 cut(s)	621, 907, 1795
FaeI	CATG	8 cut(s)	76, 751, 1003, 1250, 1310, 1600, 1664, 1680
FalI	AAGNNNNNCTT	2 cut(s)	508, 540
FaqI	GGGAC	1 cut(s)	582
FatI	CATG	8 cut(s)	72, 747, 999, 1246, 1306, 1596, 1660, 1676
FbaI	TGATCA	1 cut(s)	274
FblI	GTMKAC	2 cut(s)	674, 1311
Fnu4HI	GCNGC	4 cut(s)	11, 549, 687, 1729
FokI	GGATG	6 cut(s)	170, 386, 719, 1515, 1556, 1706
FriOI	GRGCYC	2 cut(s)	1485, 1702
Fsp4HI	GCNGC	4 cut(s)	11, 549, 687, 1729
FspBI	CTAG	5 cut(s)	615, 921, 996, 1715, 1751
GluI	GCNGC	4 cut(s)	11, 549, 687, 1729
GsuI	CTGGAG	2 cut(s)	462, 1169
HaeIII	GGCC	4 cut(s)	245, 299, 1300, 1329
HapII	CCGG	2 cut(s)	107, 155
Hin1I	GRCGYC	1 cut(s)	87
Hin1II	CATG	8 cut(s)	76, 751, 1003, 1250, 1310, 1600, 1664, 1680
HincII	GTYRAC	2 cut(s)	352, 1431
HindII	GTYRAC	2 cut(s)	352, 1431
HindIII	AAGCTT	2 cut(s)	799, 1722
HinfI	GANTC	8 cut(s)	5, 25, 97, 118, 185, 481, 941, 1090
HpaII	CCGG	2 cut(s)	107, 155
HphI	GGTGA	3 cut(s)	371, 638, 1544
Hpy166II	GTNNAC	8 cut(s)	223, 352, 675, 1312, 1431, 1523, 1594, 1756
Hpy188I	TCNGA	8 cut(s)	49, 69, 117, 123, 190, 262, 757, 1069
Hpy188III	TCNNGA	8 cut(s)	94, 513, 786, 1130, 1207, 1471, 1661, 1766
Hpy8I	GTNNAC	8 cut(s)	223, 352, 675, 1312, 1431, 1523, 1594, 1756
Hpy99I	CGWCG	2 cut(s)	89, 92
HpyAV	CCTTC	7 cut(s)	211, 235, 1018, 1285, 1340, 1388, 1510
HpyCH4III	ACNGT	3 cut(s)	42, 55, 1054
HpyCH4IV	ACGT	2 cut(s)	87, 1565
HpyCH4V	TGCA	7 cut(s)	197, 409, 506, 611, 901, 1540, 1676
HpyF10VI	GCNNNNNNNGC	2 cut(s)	290, 1682
HpySE526I	ACGT	2 cut(s)	87, 1565
Hsp92I	GRCGYC	1 cut(s)	87
Hsp92II	CATG	8 cut(s)	76, 751, 1003, 1250, 1310, 1600, 1664, 1680
Ksp22I	TGATCA	1 cut(s)	274
Kzo9I	GATC	7 cut(s)	274, 361, 1060, 1143, 1416, 1467, 1762
LmnI	GCTCC	4 cut(s)	290, 935, 1226, 1697
Lsp1109I	GCAGC	1 cut(s)	535
LweI	GCATC	5 cut(s)	347, 578, 598, 620, 1425
MabI	ACCWGGT	1 cut(s)	1388
MaeI	CTAG	5 cut(s)	615, 921, 996, 1715, 1751
MaeII	ACGT	2 cut(s)	87, 1565
MaeIII	GTNAC	3 cut(s)	109, 626, 827
MalI	GATC	7 cut(s)	276, 363, 1062, 1145, 1418, 1469, 1764
MbiI	CCGCTC	1 cut(s)	1229
MboI	GATC	7 cut(s)	274, 361, 1060, 1143, 1416, 1467, 1762
MflI	RGATCY	2 cut(s)	1143, 1416
MhlI	GDGCHC	4 cut(s)	1485, 1510, 1660, 1702
MlsI	TGGCCA	1 cut(s)	299
MluCI	AATT	7 cut(s)	168, 432, 1043, 1125, 1218, 1345, 1742
MluNI	TGGCCA	1 cut(s)	299
MlyI	GAGTC	3 cut(s)	14, 112, 1099
MmeI	TCCRAC	1 cut(s)	1204
Mox20I	TGGCCA	1 cut(s)	299
Mph1103I	ATGCAT	1 cut(s)	613
MroXI	GAANNNNTTC	2 cut(s)	520, 793
MscI	TGGCCA	1 cut(s)	299
MseI	TTAA	1 cut(s)	1097
MslI	CAYNNNNRTG	1 cut(s)	1323
Msp20I	TGGCCA	1 cut(s)	299
MspI	CCGG	2 cut(s)	107, 155
MspR9I	CCNGG	7 cut(s)	441, 472, 717, 1148, 1390, 1422, 1500
MvaI	CCWGG	7 cut(s)	441, 472, 717, 1148, 1390, 1422, 1500
MwoI	GCNNNNNNNGC	2 cut(s)	290, 1682
NdeII	GATC	7 cut(s)	274, 361, 1060, 1143, 1416, 1467, 1762
NlaIII	CATG	8 cut(s)	76, 751, 1003, 1250, 1310, 1600, 1664, 1680
NlaIV	GGNNCC	3 cut(s)	598, 1418, 1509
NmuCI	GTSAC	2 cut(s)	626, 827
NsiI	ATGCAT	1 cut(s)	613
NspI	RCATGY	2 cut(s)	1310, 1680
OliI	CACNNNNGTG	1 cut(s)	1323
PagI	TCATGA	1 cut(s)	1660
PcsI	WCGNNNNNNNCGW	1 cut(s)	84
PdmI	GAANNNNTTC	2 cut(s)	520, 793
PfeI	GAWTC	5 cut(s)	25, 97, 185, 481, 941
PflFI	GACNNNGTC	2 cut(s)	86, 89
PfoI	TCCNGGA	3 cut(s)	439, 715, 1146
PkrI	GCNGC	4 cut(s)	12, 550, 688, 1730
PleI	GAGTC	3 cut(s)	13, 112, 1098
PpsI	GAGTC	3 cut(s)	13, 112, 1098
Psp124BI	GAGCTC	1 cut(s)	1702
Psp6I	CCWGG	7 cut(s)	439, 470, 715, 1146, 1388, 1420, 1498
PspGI	CCWGG	7 cut(s)	439, 470, 715, 1146, 1388, 1420, 1498
PspN4I	GGNNCC	3 cut(s)	598, 1418, 1509
PspPI	GGNCC	3 cut(s)	596, 1201, 1298
PstI	CTGCAG	2 cut(s)	199, 508
PstNI	CAGNNNCTG	2 cut(s)	512, 785
PsuI	RGATCY	2 cut(s)	1143, 1416
PsyI	GACNNNGTC	2 cut(s)	86, 89
RsaI	GTAC	4 cut(s)	1237, 1522, 1553, 1595
RsaNI	GTAC	4 cut(s)	1236, 1521, 1552, 1594
RseI	CAYNNNNRTG	1 cut(s)	1323
SacI	GAGCTC	1 cut(s)	1702
SaqAI	TTAA	1 cut(s)	1097
SatI	GCNGC	4 cut(s)	11, 549, 687, 1729
Sau3AI	GATC	7 cut(s)	274, 361, 1060, 1143, 1416, 1467, 1762
Sau96I	GGNCC	3 cut(s)	596, 1201, 1298
SchI	GAGTC	3 cut(s)	14, 112, 1099
ScrFI	CCNGG	7 cut(s)	441, 472, 717, 1148, 1390, 1422, 1500
SduI	GDGCHC	4 cut(s)	1485, 1510, 1660, 1702
SexAI	ACCWGGT	1 cut(s)	1388
SfaNI	GCATC	5 cut(s)	347, 578, 598, 620, 1425
SfcI	CTRYAG	2 cut(s)	195, 504
SinI	GGWCC	2 cut(s)	596, 1201
SmiMI	CAYNNNNRTG	1 cut(s)	1323
SmlI	CTYRAG	3 cut(s)	1207, 1701, 1766
SmoI	CTYRAG	3 cut(s)	1207, 1701, 1766
Sse9I	AATT	7 cut(s)	168, 432, 1043, 1125, 1218, 1345, 1742
SsiI	CCGC	6 cut(s)	686, 1229, 1304, 1530, 1648, 1729
SspMI	CTAG	5 cut(s)	615, 921, 996, 1715, 1751
SstI	GAGCTC	1 cut(s)	1702
StyD4I	CCNGG	7 cut(s)	439, 470, 715, 1146, 1388, 1420, 1498
StyI	CCWWGG	3 cut(s)	621, 907, 1795
TaaI	ACNGT	3 cut(s)	42, 55, 1054
TaiI	ACGT	2 cut(s)	90, 1568
TaqI	TCGA	4 cut(s)	384, 390, 1333, 1544
TasI	AATT	7 cut(s)	168, 432, 1043, 1125, 1218, 1345, 1742
TatI	WGTACW	2 cut(s)	1551, 1593
TauI	GCSGC	2 cut(s)	689, 1731
TfiI	GAWTC	5 cut(s)	25, 97, 185, 481, 941
Tru1I	TTAA	1 cut(s)	1097
Tru9I	TTAA	1 cut(s)	1097
TscAI	CASTG	4 cut(s)	204, 775, 936, 1288
TseFI	GTSAC	2 cut(s)	626, 827
TseI	GCWGC	2 cut(s)	10, 548
Tsp45I	GTSAC	2 cut(s)	626, 827
TspDTI	ATGAA	6 cut(s)	195, 714, 1529, 1558, 1616, 1817
TspRI	CASTG	4 cut(s)	204, 775, 936, 1288
Tth111I	GACNNNGTC	2 cut(s)	86, 89
VpaK11BI	GGWCC	2 cut(s)	596, 1201
XapI	RAATTY	3 cut(s)	432, 1125, 1345
XceI	RCATGY	2 cut(s)	1310, 1680
XcmI	CCANNNNNNNNNTGG	1 cut(s)	468
XmiI	GTMKAC	2 cut(s)	674, 1311
XmnI	GAANNNNTTC	2 cut(s)	520, 793
XspI	CTAG	5 cut(s)	615, 921, 996, 1715, 1751
ZraI	GACGTC	1 cut(s)	88
Zsp2I	ATGCAT	1 cut(s)	613

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.