Belongs to the ubiquitin-conjugating enzyme family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g20020 FvH4_3g20020 FvH4_3g20020 FvH4_3g20020 FvH4_3g20020 FvH4_3g20020 FvH4_3g20020 FvH4_3g20020 FvH4_3g20020 |
| rosa_chinensis | RchiOBHm_Chr5g0033801 RchiOBHm_Chr5g0033811 |
| rosa_laevigata | RLG00000033502 RLG00000033503 |
| rosa_multiflora | Rmu_co8469003.1_g000001 Rmu_sc0001768.1_g000051 Rmu_sc0001768.1_g000056 Rmu_sc0001768.1_g000059 |
| rosa_roxburghii | Rroxscaffold_1G00046360 Rroxscaffold_1G00046380 |
| rosa_rugosa | Rorug05G0142100 Rorug05G0142100 Rorug05G0142100 Rorug05G0142200 Rorug05G0142400 Rorug05G0142500 |
| rosa_samantha | Rh5AG233300 Rh5AG233400 Rh5BG233800 Rh5BG233900 Rh5CG263700 Rh5CG264000 Rh5DG240700 Rh5DG240800 |
| rosa_wichuraiana | Rw5G021570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 578 |
| Acc36I | ACCTGC | 2 cut(s) | 7, 578 |
| AclI | AACGTT | 2 cut(s) | 195, 473 |
| AclWI | GGATC | 1 cut(s) | 171 |
| AcsI | RAATTY | 1 cut(s) | 224 |
| AfaI | GTAC | 3 cut(s) | 362, 429, 544 |
| AfeI | AGCGCT | 1 cut(s) | 38 |
| AgsI | TTSAA | 3 cut(s) | 229, 487, 499 |
| AjnI | CCWGG | 1 cut(s) | 159 |
| AleI | CACNNNNGTG | 1 cut(s) | 462 |
| AluBI | AGCT | 2 cut(s) | 272, 315 |
| AluI | AGCT | 2 cut(s) | 272, 315 |
| AlwI | GGATC | 1 cut(s) | 171 |
| Aor51HI | AGCGCT | 1 cut(s) | 38 |
| AoxI | GGCC | 1 cut(s) | 3 |
| ApoI | RAATTY | 1 cut(s) | 224 |
| AseI | ATTAAT | 1 cut(s) | 177 |
| AspLEI | GCGC | 2 cut(s) | 39, 437 |
| AspS9I | GGNCC | 1 cut(s) | 157 |
| AsuHPI | GGTGA | 1 cut(s) | 89 |
| AvaII | GGWCC | 1 cut(s) | 157 |
| BbsI | GAAGAC | 1 cut(s) | 549 |
| BbvCI | CCTCAGC | 1 cut(s) | 103 |
| BceAI | ACGGC | 2 cut(s) | 407, 448 |
| BciT130I | CCWGG | 1 cut(s) | 161 |
| BciVI | GTATCC | 1 cut(s) | 346 |
| BfaI | CTAG | 1 cut(s) | 323 |
| BfoI | RGCGCY | 2 cut(s) | 40, 438 |
| BfuAI | ACCTGC | 2 cut(s) | 7, 578 |
| BfuI | GTATCC | 1 cut(s) | 346 |
| Bme1390I | CCNGG | 1 cut(s) | 161 |
| Bme18I | GGWCC | 1 cut(s) | 157 |
| BmgT120I | GGNCC | 1 cut(s) | 157 |
| BmrFI | CCNGG | 1 cut(s) | 161 |
| BmsI | GCATC | 2 cut(s) | 88, 542 |
| BpiI | GAAGAC | 1 cut(s) | 549 |
| Bpu10I | CCTNAGC | 1 cut(s) | 103 |
| Bse1I | ACTGG | 3 cut(s) | 224, 257, 286 |
| BseBI | CCWGG | 1 cut(s) | 161 |
| BseGI | GGATG | 1 cut(s) | 459 |
| BseMII | CTCAG | 2 cut(s) | 20, 117 |
| BseNI | ACTGG | 3 cut(s) | 224, 257, 286 |
| BshFI | GGCC | 1 cut(s) | 5 |
| BslFI | GGGAC | 1 cut(s) | 263 |
| BsmFI | GGGAC | 1 cut(s) | 263 |
| BsnI | GGCC | 1 cut(s) | 5 |
| Bsp143I | GATC | 2 cut(s) | 79, 163 |
| BspANI | GGCC | 1 cut(s) | 5 |
| BspCNI | CTCAG | 2 cut(s) | 21, 116 |
| BspMI | ACCTGC | 2 cut(s) | 7, 578 |
| BspPI | GGATC | 1 cut(s) | 171 |
| BsrI | ACTGG | 3 cut(s) | 224, 257, 286 |
| BssMI | GATC | 2 cut(s) | 79, 163 |
| Bst2UI | CCWGG | 1 cut(s) | 161 |
| Bst4CI | ACNGT | 5 cut(s) | 245, 310, 528, 555, 568 |
| BstC8I | GCNNGC | 1 cut(s) | 69 |
| BstDEI | CTNAG | 2 cut(s) | 29, 103 |
| BstF5I | GGATG | 1 cut(s) | 459 |
| BstH2I | RGCGCY | 2 cut(s) | 40, 438 |
| BstHHI | GCGC | 2 cut(s) | 39, 437 |
| BstKTI | GATC | 2 cut(s) | 82, 166 |
| BstMBI | GATC | 2 cut(s) | 79, 163 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 432 |
| BstNI | CCWGG | 1 cut(s) | 161 |
| BstSCI | CCNGG | 1 cut(s) | 159 |
| BstV2I | GAAGAC | 1 cut(s) | 549 |
| BstX2I | RGATCY | 1 cut(s) | 163 |
| BstYI | RGATCY | 1 cut(s) | 163 |
| BsuI | GTATCC | 1 cut(s) | 346 |
| BsuRI | GGCC | 1 cut(s) | 5 |
| BtsCI | GGATG | 1 cut(s) | 459 |
| BveI | ACCTGC | 2 cut(s) | 7, 578 |
| Cac8I | GCNNGC | 1 cut(s) | 69 |
| CfoI | GCGC | 2 cut(s) | 39, 437 |
| Cfr13I | GGNCC | 1 cut(s) | 157 |
| Csp6I | GTAC | 3 cut(s) | 361, 428, 543 |
| CviAII | CATG | 4 cut(s) | 13, 358, 395, 448 |
| CviJI | RGCY | 5 cut(s) | 5, 67, 272, 285, 315 |
| CviKI_1 | RGCY | 5 cut(s) | 5, 67, 272, 285, 315 |
| CviQI | GTAC | 3 cut(s) | 361, 428, 543 |
| DdeI | CTNAG | 2 cut(s) | 29, 103 |
| DpnI | GATC | 2 cut(s) | 81, 165 |
| DpnII | GATC | 2 cut(s) | 79, 163 |
| Eco47I | GGWCC | 1 cut(s) | 157 |
| Eco47III | AGCGCT | 1 cut(s) | 38 |
| EcoO109I | RGGNCCY | 1 cut(s) | 157 |
| EcoRII | CCWGG | 1 cut(s) | 159 |
| FaeI | CATG | 4 cut(s) | 16, 361, 398, 451 |
| FaiI | YATR | 6 cut(s) | 14, 185, 345, 359, 396, 449 |
| FaqI | GGGAC | 1 cut(s) | 263 |
| FatI | CATG | 4 cut(s) | 12, 357, 394, 447 |
| FokI | GGATG | 1 cut(s) | 446 |
| FspBI | CTAG | 1 cut(s) | 323 |
| GlaI | GCGC | 2 cut(s) | 38, 436 |
| HaeII | RGCGCY | 2 cut(s) | 40, 438 |
| HaeIII | GGCC | 1 cut(s) | 5 |
| HhaI | GCGC | 2 cut(s) | 39, 437 |
| Hin1II | CATG | 4 cut(s) | 16, 361, 398, 451 |
| Hin6I | GCGC | 2 cut(s) | 37, 435 |
| HinP1I | GCGC | 2 cut(s) | 37, 435 |
| HinfI | GANTC | 1 cut(s) | 326 |
| HphI | GGTGA | 1 cut(s) | 89 |
| Hpy166II | GTNNAC | 1 cut(s) | 430 |
| Hpy188I | TCNGA | 2 cut(s) | 278, 340 |
| Hpy188III | TCNNGA | 2 cut(s) | 248, 323 |
| Hpy8I | GTNNAC | 1 cut(s) | 430 |
| Hpy99I | CGWCG | 1 cut(s) | 87 |
| HpyAV | CCTTC | 3 cut(s) | 180, 287, 365 |
| HpyCH4III | ACNGT | 5 cut(s) | 245, 310, 528, 555, 568 |
| HpyCH4IV | ACGT | 3 cut(s) | 195, 399, 473 |
| HpyCH4V | TGCA | 4 cut(s) | 16, 191, 215, 533 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 432 |
| HpyF3I | CTNAG | 2 cut(s) | 29, 103 |
| HpySE526I | ACGT | 3 cut(s) | 195, 399, 473 |
| Hsp92II | CATG | 4 cut(s) | 16, 361, 398, 451 |
| HspAI | GCGC | 2 cut(s) | 37, 435 |
| Kzo9I | GATC | 2 cut(s) | 79, 163 |
| LmnI | GCTCC | 1 cut(s) | 34 |
| LpnPI | CCDG | 9 cut(s) | 2, 57, 146, 173, 205, 238, 267, 343, 573 |
| LweI | GCATC | 2 cut(s) | 88, 542 |
| MaeI | CTAG | 1 cut(s) | 323 |
| MaeII | ACGT | 3 cut(s) | 195, 399, 473 |
| MalI | GATC | 2 cut(s) | 81, 165 |
| MboI | GATC | 2 cut(s) | 79, 163 |
| MboII | GAAGA | 4 cut(s) | 158, 421, 533, 549 |
| MflI | RGATCY | 1 cut(s) | 163 |
| MluCI | AATT | 5 cut(s) | 46, 210, 224, 260, 318 |
| MmeI | TCCRAC | 1 cut(s) | 237 |
| MnlI | CCTC | 6 cut(s) | 16, 24, 56, 112, 361, 484 |
| MseI | TTAA | 4 cut(s) | 117, 177, 509, 595 |
| MslI | CAYNNNNRTG | 1 cut(s) | 462 |
| MspR9I | CCNGG | 1 cut(s) | 161 |
| MvaI | CCWGG | 1 cut(s) | 161 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 432 |
| NdeII | GATC | 2 cut(s) | 79, 163 |
| NlaIII | CATG | 4 cut(s) | 16, 361, 398, 451 |
| OliI | CACNNNNGTG | 1 cut(s) | 462 |
| PaqCI | CACCTGC | 1 cut(s) | 578 |
| PfeI | GAWTC | 1 cut(s) | 326 |
| PpuMI | RGGWCCY | 1 cut(s) | 157 |
| PshBI | ATTAAT | 1 cut(s) | 177 |
| Psp1406I | AACGTT | 2 cut(s) | 195, 473 |
| Psp5II | RGGWCCY | 1 cut(s) | 157 |
| Psp6I | CCWGG | 1 cut(s) | 159 |
| PspGI | CCWGG | 1 cut(s) | 159 |
| PspPI | GGNCC | 1 cut(s) | 157 |
| PspPPI | RGGWCCY | 1 cut(s) | 157 |
| PsuI | RGATCY | 1 cut(s) | 163 |
| RsaI | GTAC | 3 cut(s) | 362, 429, 544 |
| RsaNI | GTAC | 3 cut(s) | 361, 428, 543 |
| RseI | CAYNNNNRTG | 1 cut(s) | 462 |
| SaqAI | TTAA | 4 cut(s) | 117, 177, 509, 595 |
| Sau3AI | GATC | 2 cut(s) | 79, 163 |
| Sau96I | GGNCC | 1 cut(s) | 157 |
| ScrFI | CCNGG | 1 cut(s) | 161 |
| SfaNI | GCATC | 2 cut(s) | 88, 542 |
| SinI | GGWCC | 1 cut(s) | 157 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 462 |
| Sse9I | AATT | 5 cut(s) | 46, 210, 224, 260, 318 |
| SspI | AATATT | 1 cut(s) | 514 |
| SspMI | CTAG | 1 cut(s) | 323 |
| StyD4I | CCNGG | 1 cut(s) | 159 |
| TaaI | ACNGT | 5 cut(s) | 245, 310, 528, 555, 568 |
| TaiI | ACGT | 3 cut(s) | 198, 402, 476 |
| TaqI | TCGA | 3 cut(s) | 82, 96, 453 |
| TasI | AATT | 5 cut(s) | 46, 210, 224, 260, 318 |
| TatI | WGTACW | 1 cut(s) | 360 |
| TfiI | GAWTC | 1 cut(s) | 326 |
| Tru1I | TTAA | 4 cut(s) | 117, 177, 509, 595 |
| Tru9I | TTAA | 4 cut(s) | 117, 177, 509, 595 |
| TspDTI | ATGAA | 1 cut(s) | 222 |
| TspGWI | ACGGA | 2 cut(s) | 100, 452 |
| VpaK11BI | GGWCC | 1 cut(s) | 157 |
| VspI | ATTAAT | 1 cut(s) | 177 |
| XapI | RAATTY | 1 cut(s) | 224 |
| XbaI | TCTAGA | 1 cut(s) | 322 |
| XspI | CTAG | 1 cut(s) | 323 |