Rorug05G0142100

Belongs to the ubiquitin-conjugating enzyme family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0003941
Physical Location & Seq
Reverse (-)
12984163 .. 12996697
12535 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0142100.1

Sequence Viewer

Length: 2337 bp
ATGAACAATACTTCTGGGTTGTTGGCGGTTAGTCATTCCAGTGCCGATCCCGATGTTGTTGATGTCGTGGATCACGCTGTCGTTGATGAGATTGAGAGATTAGATTTGAGAGGAGACGATGTAGCGGTGGAGGTAGAGGAGAAGAAAGAGGAAGGGGGAGAGGTTGAGGCGGAGGAGAAGAGTTCTAATGGTGGTGGTGGAGAAATCGAAAACGGAAATGAAAGTGAGAGACAGAGCGAGGAAGAAGAGAGCAATGAAGGAGAAAACAGGAGTGAGAATGGAGGTGAGGGAGAGAAGAAGGGGGGAGAATATAACAGAAGGTATCAGTACCCAGTGAGGCCTGAAGCTGAAGACCGTTCCTTTTACCTCAAGACGGGGAATTGCAAGTTCGGTTCCAATTGCAGGTTTAATCACCCTGTTAGAAGGAAAAACAACCAGCATTTCCAGGTTTTTAAAGACAAGGTGAAGGAAAAGGATGCGTTGTCAGAGAAGCCAAGCCAGACAGAATGCAAGTATTACTTAAGGCCAGGGGGATGTAAGTATGGGAAAGCTTGCAGATACAACCATGGAAAAGGGAAACCTTCGGTTGCTCCAGTTGTGGAACTTAACTTTCTGGGACTACCAATTCGACGGGGGGGGAGAGAGTGTCCCTACTATATGCGAAATGGCTCCTGCAAGTATGGATCAAACTGCAGGTTTAATCACCCTGATCCTACTGCTGCAGGAGGATCTGACCCTCCATCTGGATTTGATAATGGTGGACCTGCATCATTACAAGGTGGATCGCAATCATCATCTTGGTCTGCACCAAGATCATTGAATGAGACCCCGCTTTATATGCCAATGATGATGCCACCATCTCAAGGGGTTCCTTCTCAAAATACAGAATGGAATGGCTATCAGGCACCAGTTTATCTAGAAAGAAGCATGCCTGCACGTCCACCATATGTTATCAACAACTCAGGGACCAAAACCAATGTTTATAAACAATATCCACCGTCAAATCAAGTTGATGAATTTCCAGAACGACCTGGACAACGTTTGTGCAGTTTCTTTTTAAGAACAGGGGACTGTAAGTTTAAATCTAATTGCAAATATCATCAGCCAAAAAGTCAGACTGCAGTATCCCCCTCATTTGCACCGAGTGACAAGGGCCTGCCTTTGAGACCATTGTTTCGACCTGCATACGCTATCATGCTGACACACCTCCGTTCCGAAGCACTTGAAAATTTTAAAATAAGACTGGAGCGATCATTGGTCCAAAAAGAAGGGTTTGCTTCATCCGTTTTTGCCCATACTGAATCTTGCATGCGTGAGTTTGACCAAGCATGTGCAGATGTTGCCATAAATTCCGATGGGAATGCATATGGCGTTGATACGGAAAAAGCCAAAAGGAAACTTAAGTGCGATATAGAAGCATATGCATCATCTCAACTTGACGAACAATTGTCAAGATTGAAACTGGACTGTGAGAGACAACTTTTGGAAGCTTTAAGTCTTAATGATCCTATAGCGGCTCTGCTACTTGATGGTGACGACGACATCTGGAGGAAAAAAAGGGGACTTCTTCTTGATGCCATAGAACTTGTAGATGAACGTTTTTCAAATGAGATTAATGGTTATGCGTTGAACCAAGGAAGAAGTGCCGAAATGTTGCAAATTTTGAGGGACTATGCAAGAAGAGTGGCGGAGGAAAAACCCAGACAGGAGGCTAGTCGTGTTCTGACTCACATGATTAATAGGTTTCTCCAAGCCTTCAATTACGATAGCGATGAAAATGCTAGAACTTGGACTGTGGGGGTTGACATTAGAATTATTACCCAGAATGCTCGCCATGAGTCTCTTAAGATTTTATCTACTCTGGCTGCCATTCGCCTGGATAAGACGCAAGATGATATTGAACGAGTTCTCTCTTCTACTTTAATCGATGGAGAAATAAGTTCTACAAATGTTCTTGACTCAGTTACTTGGGTTATGGTTTCTTCAAATGATACTCTAATTACACCACTGGAGTGCCAGTCGTTGTGGAGACAGTTCAAAGAACAAACCGAGCGTGCTGTCTTTCAAGCTTATGCAACACAGGTGCTTCACCGGCGAAATAACGCTCTAAAAGACGATGCCCCAAATGACCCGGAATTTAGCCCATTTTTATGGATAATTGTGGCTATAGTAGTGTTGTTGTCAACAGCCTATGGAATCCCTAACGCCGCGTCTCTTGTACCTGAAATTCTAGCACTGCTGCCACGCTTCAGAAGTCAAGCTCTTACTCTTTCAGCCATAATTGTAGCTGTGAAGAAAATCGTAGAGGCCTACAGAAATCGTCGCTTGCAAAACTGA

Protein Analysis

778

Amino Acids

87.26

Weight (kDa)

5.85

Isoelectric Point (pI)

53.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CCCH PF00642 121 - 139 3.1e-07 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 214 - 236 3.2e-09 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH_4 PF18044 216 - 236 5.4e-07 CCCH-type zinc finger
Sey1_3HB PF20428 393 - 726 9.4e-51 Sey1 three-helix bundle domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 984
Acc36I ACCTGC 4 cut(s) 393, 684, 772, 1189
AccB1I GGYRCC 1 cut(s) 904
AccII CGCG 1 cut(s) 2210
AciI CCGC 7 cut(s) 26, 125, 170, 830, 1514, 1688, 2208
AclI AACGTT 2 cut(s) 1039, 1597
AclWI GGATC 7 cut(s) 41, 78, 691, 704, 736, 790, 1499
AcsI RAATTY 6 cut(s) 1016, 1228, 1348, 1659, 2135, 2226
AcuI CTGAAG 3 cut(s) 363, 369, 2233
AdeI CACNNNGTG 1 cut(s) 1145
AfaI GTAC 2 cut(s) 329, 2220
AfiI CCNNNNNNNGG 4 cut(s) 373, 402, 743, 863
AflII CTTAAG 3 cut(s) 520, 1400, 1844
AjiI CACGTC 1 cut(s) 938
AjnI CCWGG 4 cut(s) 444, 526, 1030, 1875
AleI CACNNNNGTG 1 cut(s) 2011
AluBI AGCT 6 cut(s) 347, 551, 1490, 2069, 2261, 2288
AluI AGCT 6 cut(s) 347, 551, 1490, 2069, 2261, 2288
Alw26I GTCTC 8 cut(s) 108, 223, 818, 1159, 1468, 1845, 2023, 2217
AlwI GGATC 7 cut(s) 41, 78, 691, 704, 736, 790, 1499
AoxI GGCC 4 cut(s) 338, 524, 1153, 2307
ApeKI GCWGC 3 cut(s) 719, 1865, 2239
ApoI RAATTY 6 cut(s) 1016, 1228, 1348, 1659, 2135, 2226
ArsI GACNNNNNNTTYG 4 cut(s) 609, 641, 1158, 1190
AseI ATTAAT 2 cut(s) 1614, 1737
Asp700I GAANNNNTTC 1 cut(s) 1905
AspS9I GGNCC 4 cut(s) 761, 966, 1153, 1258
AsuC2I CCSGG 1 cut(s) 2132
AsuHPI GGTGA 6 cut(s) 296, 404, 475, 695, 1544, 2081
AvaII GGWCC 3 cut(s) 761, 966, 1258
BaeI ACNNNNGTAYC 2 cut(s) 1107, 1140
BanI GGYRCC 1 cut(s) 904
BbsI GAAGAC 1 cut(s) 357
BbvI GCAGC 3 cut(s) 706, 1852, 2226
BccI CCATC 5 cut(s) 748, 865, 1349, 1523, 1922
BcgI CGANNNNNNTGC 4 cut(s) 1343, 1377, 1760, 1794
BciT130I CCWGG 4 cut(s) 446, 528, 1032, 1877
BciVI GTATCC 1 cut(s) 1135
BcnI CCSGG 1 cut(s) 2132
BcoDI GTCTC 8 cut(s) 108, 223, 818, 1159, 1468, 1845, 2023, 2217
BfaI CTAG 4 cut(s) 917, 1713, 1782, 2231
BfmI CTRYAG 6 cut(s) 691, 720, 1119, 1509, 2166, 2311
BfrI CTTAAG 3 cut(s) 520, 1400, 1844
BfuAI ACCTGC 4 cut(s) 393, 684, 772, 1189
BfuI GTATCC 1 cut(s) 1135
BisI GCNGC 5 cut(s) 720, 1515, 1866, 2208, 2240
BlsI GCNGC 5 cut(s) 721, 1516, 1867, 2209, 2241
Bme1390I CCNGG 5 cut(s) 446, 528, 1032, 1877, 2132
Bme18I GGWCC 3 cut(s) 761, 966, 1258
BmgBI CACGTC 1 cut(s) 938
BmgT120I GGNCC 4 cut(s) 761, 966, 1153, 1258
BmiI GGNNCC 5 cut(s) 394, 670, 870, 906, 967
BmrFI CCNGG 5 cut(s) 446, 528, 1032, 1877, 2132
BmrI ACTGGG 1 cut(s) 326
BmsI GCATC 6 cut(s) 466, 776, 840, 1433, 1564, 2107
BmuI ACTGGG 1 cut(s) 326
BpiI GAAGAC 1 cut(s) 357
BpmI CTGGAG 4 cut(s) 576, 1265, 1567, 2030
BpuEI CTTGAG 2 cut(s) 353, 846
BpuMI CCSGG 1 cut(s) 2132
Bsa29I ATCGAT 1 cut(s) 1926
BsaBI GATNNNNATC 1 cut(s) 787
BsaI GGTCTC 2 cut(s) 818, 1159
BsaJI CCNNGG 3 cut(s) 527, 565, 1633
BsaXI ACNNNNNCTCC 6 cut(s) 105, 135, 631, 661, 2003, 2033
Bsc4I CCNNNNNNNGG 4 cut(s) 373, 402, 743, 863
Bse118I RCCGGY 1 cut(s) 2091
Bse1I ACTGG 8 cut(s) 39, 332, 593, 908, 1248, 1467, 2013, 2017
Bse3DI GCAATG 1 cut(s) 259
Bse8I GATNNNNATC 1 cut(s) 787
BseBI CCWGG 4 cut(s) 446, 528, 1032, 1877
BseCI ATCGAT 1 cut(s) 1926
BseDI CCNNGG 3 cut(s) 527, 565, 1633
BseGI GGATG 3 cut(s) 481, 539, 1280
BseJI GATNNNNATC 1 cut(s) 787
BseLI CCNNNNNNNGG 4 cut(s) 373, 402, 743, 863
BseMI GCAATG 1 cut(s) 259
BseMII CTCAG 2 cut(s) 975, 1974
BseNI ACTGG 8 cut(s) 39, 332, 593, 908, 1248, 1467, 2013, 2017
BseRI GAGGAG 3 cut(s) 126, 152, 188
BseXI GCAGC 3 cut(s) 706, 1852, 2226
BsgI GTGCAG 4 cut(s) 789, 918, 1066, 1353
Bsh1236I CGCG 1 cut(s) 2210
BshFI GGCC 4 cut(s) 340, 526, 1155, 2309
BshNI GGYRCC 1 cut(s) 904
BshVI ATCGAT 1 cut(s) 1926
BsiSI CCGG 2 cut(s) 2092, 2132
BslFI GGGAC 6 cut(s) 630, 633, 979, 1082, 1575, 1682
BslI CCNNNNNNNGG 4 cut(s) 373, 402, 743, 863
BsmAI GTCTC 8 cut(s) 108, 223, 818, 1159, 1468, 1845, 2023, 2217
BsmBI CGTCTC 2 cut(s) 108, 2217
BsmFI GGGAC 6 cut(s) 630, 633, 979, 1082, 1575, 1682
BsmI GAATGC 3 cut(s) 512, 1366, 1831
BsnI GGCC 4 cut(s) 340, 526, 1155, 2309
Bso31I GGTCTC 2 cut(s) 818, 1159
Bsp143I GATC 9 cut(s) 46, 70, 683, 709, 728, 782, 812, 1250, 1504
Bsp19I CCATGG 1 cut(s) 565
BspACI CCGC 7 cut(s) 26, 125, 170, 830, 1514, 1688, 2208
BspANI GGCC 4 cut(s) 340, 526, 1155, 2309
BspCNI CTCAG 2 cut(s) 974, 1973
BspDI ATCGAT 1 cut(s) 1926
BspFNI CGCG 1 cut(s) 2210
BspLI GGNNCC 5 cut(s) 394, 670, 870, 906, 967
BspMAI CTGCAG 3 cut(s) 695, 724, 1123
BspMI ACCTGC 4 cut(s) 393, 684, 772, 1189
BspPI GGATC 7 cut(s) 41, 78, 691, 704, 736, 790, 1499
BspT107I GGYRCC 1 cut(s) 904
BspTI CTTAAG 3 cut(s) 520, 1400, 1844
BspTNI GGTCTC 2 cut(s) 818, 1159
BsrDI GCAATG 1 cut(s) 259
BsrFI RCCGGY 1 cut(s) 2091
BsrI ACTGG 8 cut(s) 39, 332, 593, 908, 1248, 1467, 2013, 2017
BssAI RCCGGY 1 cut(s) 2091
BssECI CCNNGG 3 cut(s) 527, 565, 1633
BssMI GATC 9 cut(s) 46, 70, 683, 709, 728, 782, 812, 1250, 1504
BssT1I CCWWGG 2 cut(s) 565, 1633
Bst2UI CCWGG 4 cut(s) 446, 528, 1032, 1877
Bst4CI ACNGT 6 cut(s) 356, 999, 1073, 1469, 1795, 2034
Bst6I CTCTTC 4 cut(s) 173, 240, 1675, 1918
BstAFI CTTAAG 3 cut(s) 520, 1400, 1844
BstAPI GCANNNNNTGC 1 cut(s) 1340
BstC8I GCNNGC 8 cut(s) 553, 929, 933, 1157, 1310, 1831, 2055, 2327
BstDEI CTNAG 2 cut(s) 961, 1960
BstDSI CCRYGG 1 cut(s) 565
BstF5I GGATG 3 cut(s) 481, 539, 1280
BstFNI CGCG 1 cut(s) 2210
BstKTI GATC 9 cut(s) 49, 73, 686, 712, 731, 785, 815, 1253, 1507
BstMAI GTCTC 8 cut(s) 108, 223, 818, 1159, 1468, 1845, 2023, 2217
BstMBI GATC 9 cut(s) 46, 70, 683, 709, 728, 782, 812, 1250, 1504
BstMWI GCNNNNNNNGC 3 cut(s) 838, 1340, 2092
BstNI CCWGG 4 cut(s) 446, 528, 1032, 1877
BstNSI RCATGY 3 cut(s) 931, 1312, 1332
BstSCI CCNGG 5 cut(s) 444, 526, 1030, 1875, 2130
BstSFI CTRYAG 6 cut(s) 691, 720, 1119, 1509, 2166, 2311
BstUI CGCG 1 cut(s) 2210
BstV1I GCAGC 3 cut(s) 706, 1852, 2226
BstV2I GAAGAC 1 cut(s) 357
BstX2I RGATCY 1 cut(s) 728
BstXI CCANNNNNNTGG 2 cut(s) 1876, 2151
BstYI RGATCY 1 cut(s) 728
Bsu15I ATCGAT 1 cut(s) 1926
BsuI GTATCC 1 cut(s) 1135
BsuRI GGCC 4 cut(s) 340, 526, 1155, 2309
BsuTUI ATCGAT 1 cut(s) 1926
BtgI CCRYGG 1 cut(s) 565
BtgZI GCGATG 1 cut(s) 1785
BtrI CACGTC 1 cut(s) 938
BtsCI GGATG 3 cut(s) 481, 539, 1280
BtsI GCAGTG 1 cut(s) 2234
BtsIMutI CAGTG 4 cut(s) 46, 339, 2006, 2234
BveI ACCTGC 4 cut(s) 393, 684, 772, 1189
Cac8I GCNNGC 8 cut(s) 553, 929, 933, 1157, 1310, 1831, 2055, 2327
Cfr10I RCCGGY 1 cut(s) 2091
Cfr13I GGNCC 4 cut(s) 761, 966, 1153, 1258
ClaI ATCGAT 1 cut(s) 1926
CseI GACGC 2 cut(s) 1894, 2199
Csp6I GTAC 2 cut(s) 328, 2219
CspCI CAANNNNNGTGG 2 cut(s) 1665, 1700
CviAII CATG 7 cut(s) 566, 928, 1195, 1309, 1329, 1732, 1835
CviQI GTAC 2 cut(s) 328, 2219
DdeI CTNAG 2 cut(s) 961, 1960
DpnI GATC 9 cut(s) 48, 72, 685, 711, 730, 784, 814, 1252, 1506
DpnII GATC 9 cut(s) 46, 70, 683, 709, 728, 782, 812, 1250, 1504
DraI TTTAAA 3 cut(s) 454, 1081, 1234
DraIII CACNNNGTG 1 cut(s) 1145
Eam1104I CTCTTC 4 cut(s) 173, 240, 1675, 1918
EarI CTCTTC 4 cut(s) 173, 240, 1675, 1918
EciI GGCGGA 2 cut(s) 185, 1703
Eco130I CCWWGG 2 cut(s) 565, 1633
Eco147I AGGCCT 2 cut(s) 340, 2309
Eco31I GGTCTC 2 cut(s) 818, 1159
Eco47I GGWCC 3 cut(s) 761, 966, 1258
Eco57I CTGAAG 3 cut(s) 363, 369, 2233
EcoO109I RGGNCCY 1 cut(s) 1153
EcoRII CCWGG 4 cut(s) 444, 526, 1030, 1875
EcoT14I CCWWGG 2 cut(s) 565, 1633
EcoT22I ATGCAT 2 cut(s) 1366, 1426
ErhI CCWWGG 2 cut(s) 565, 1633
Esp3I CGTCTC 2 cut(s) 108, 2217
FaeI CATG 7 cut(s) 569, 931, 1198, 1312, 1332, 1735, 1838
FalI AAGNNNNNCTT 2 cut(s) 503, 535
FaqI GGGAC 6 cut(s) 630, 633, 979, 1082, 1575, 1682
FatI CATG 7 cut(s) 565, 927, 1194, 1308, 1328, 1731, 1834
FauI CCCGC 1 cut(s) 837
FauNDI CATATG 3 cut(s) 946, 1366, 1420
Fnu4HI GCNGC 5 cut(s) 720, 1515, 1866, 2208, 2240
FokI GGATG 3 cut(s) 488, 546, 1267
Fsp4HI GCNGC 5 cut(s) 720, 1515, 1866, 2208, 2240
FspBI CTAG 4 cut(s) 917, 1713, 1782, 2231
GluI GCNGC 5 cut(s) 720, 1515, 1866, 2208, 2240
GsuI CTGGAG 4 cut(s) 576, 1265, 1567, 2030
HaeIII GGCC 4 cut(s) 340, 526, 1155, 2309
HapII CCGG 2 cut(s) 2092, 2132
HgaI GACGC 2 cut(s) 1894, 2199
Hin1II CATG 7 cut(s) 569, 931, 1198, 1312, 1332, 1735, 1838
HincII GTYRAC 2 cut(s) 1804, 2184
HindII GTYRAC 2 cut(s) 1804, 2184
HindIII AAGCTT 3 cut(s) 549, 1488, 2067
HinfI GANTC 5 cut(s) 1301, 1726, 1838, 1958, 2196
HpaII CCGG 2 cut(s) 2092, 2132
HphI GGTGA 6 cut(s) 296, 404, 475, 695, 1544, 2081
Hpy166II GTNNAC 4 cut(s) 761, 941, 1804, 2184
Hpy188I TCNGA 7 cut(s) 487, 733, 1116, 1216, 1354, 1725, 2252
Hpy188III TCNNGA 9 cut(s) 50, 370, 744, 917, 1022, 1452, 1546, 1571, 1955
Hpy8I GTNNAC 4 cut(s) 761, 941, 1804, 2184
Hpy99I CGWCG 3 cut(s) 633, 1541, 2325
HpyCH4III ACNGT 6 cut(s) 356, 999, 1073, 1469, 1795, 2034
HpyCH4IV ACGT 3 cut(s) 937, 1039, 1597
HpyF10VI GCNNNNNNNGC 3 cut(s) 838, 1340, 2092
HpyF3I CTNAG 2 cut(s) 961, 1960
HpySE526I ACGT 3 cut(s) 937, 1039, 1597
Hsp92II CATG 7 cut(s) 569, 931, 1198, 1312, 1332, 1735, 1838
Kzo9I GATC 9 cut(s) 46, 70, 683, 709, 728, 782, 812, 1250, 1504
LmnI GCTCC 3 cut(s) 595, 674, 1246
Lsp1109I GCAGC 3 cut(s) 706, 1852, 2226
LweI GCATC 6 cut(s) 466, 776, 840, 1433, 1564, 2107
MaeI CTAG 4 cut(s) 917, 1713, 1782, 2231
MaeII ACGT 3 cut(s) 937, 1039, 1597
MaeIII GTNAC 3 cut(s) 1145, 1532, 1963
MalI GATC 9 cut(s) 48, 72, 685, 711, 730, 784, 814, 1252, 1506
MboI GATC 9 cut(s) 46, 70, 683, 709, 728, 782, 812, 1250, 1504
MfeI CAATTG 2 cut(s) 397, 1445
MflI RGATCY 1 cut(s) 728
MlyI GAGTC 3 cut(s) 1720, 1847, 1952
Mph1103I ATGCAT 2 cut(s) 1366, 1426
MroXI GAANNNNTTC 1 cut(s) 1905
MslI CAYNNNNRTG 3 cut(s) 39, 2011, 2149
MspCI CTTAAG 3 cut(s) 520, 1400, 1844
MspI CCGG 2 cut(s) 2092, 2132
MspR9I CCNGG 5 cut(s) 446, 528, 1032, 1877, 2132
MunI CAATTG 2 cut(s) 397, 1445
Mva1269I GAATGC 3 cut(s) 512, 1366, 1831
MvaI CCWGG 4 cut(s) 446, 528, 1032, 1877
MvnI CGCG 1 cut(s) 2210
MwoI GCNNNNNNNGC 3 cut(s) 838, 1340, 2092
NciI CCSGG 1 cut(s) 2132
NcoI CCATGG 1 cut(s) 565
NdeI CATATG 3 cut(s) 946, 1366, 1420
NdeII GATC 9 cut(s) 46, 70, 683, 709, 728, 782, 812, 1250, 1504
NlaIII CATG 7 cut(s) 569, 931, 1198, 1312, 1332, 1735, 1838
NlaIV GGNNCC 5 cut(s) 394, 670, 870, 906, 967
NmuCI GTSAC 2 cut(s) 1145, 1532
NsiI ATGCAT 2 cut(s) 1366, 1426
NspI RCATGY 3 cut(s) 931, 1312, 1332
OliI CACNNNNGTG 1 cut(s) 2011
PaeI GCATGC 2 cut(s) 931, 1312
PceI AGGCCT 2 cut(s) 340, 2309
PctI GAATGC 3 cut(s) 512, 1366, 1831
PdmI GAANNNNTTC 1 cut(s) 1905
PfeI GAWTC 2 cut(s) 1301, 2196
PkrI GCNGC 5 cut(s) 721, 1516, 1867, 2209, 2241
PleI GAGTC 3 cut(s) 1720, 1846, 1952
PpsI GAGTC 3 cut(s) 1720, 1846, 1952
PshBI ATTAAT 2 cut(s) 1614, 1737
PsiI TTATAA 1 cut(s) 984
Psp1406I AACGTT 2 cut(s) 1039, 1597
Psp6I CCWGG 4 cut(s) 444, 526, 1030, 1875
PspGI CCWGG 4 cut(s) 444, 526, 1030, 1875
PspN4I GGNNCC 5 cut(s) 394, 670, 870, 906, 967
PspPI GGNCC 4 cut(s) 761, 966, 1153, 1258
PstI CTGCAG 3 cut(s) 695, 724, 1123
PsuI RGATCY 1 cut(s) 728
RsaI GTAC 2 cut(s) 329, 2220
RsaNI GTAC 2 cut(s) 328, 2219
RseI CAYNNNNRTG 3 cut(s) 39, 2011, 2149
SatI GCNGC 5 cut(s) 720, 1515, 1866, 2208, 2240
Sau3AI GATC 9 cut(s) 46, 70, 683, 709, 728, 782, 812, 1250, 1504
Sau96I GGNCC 4 cut(s) 761, 966, 1153, 1258
SchI GAGTC 3 cut(s) 1720, 1847, 1952
ScrFI CCNGG 5 cut(s) 446, 528, 1032, 1877, 2132
SfaNI GCATC 6 cut(s) 466, 776, 840, 1433, 1564, 2107
SfcI CTRYAG 6 cut(s) 691, 720, 1119, 1509, 2166, 2311
SgrAI CRCCGGYG 1 cut(s) 2091
SinI GGWCC 3 cut(s) 761, 966, 1258
SmiMI CAYNNNNRTG 3 cut(s) 39, 2011, 2149
SmlI CTYRAG 5 cut(s) 368, 520, 861, 1400, 1844
SmoI CTYRAG 5 cut(s) 368, 520, 861, 1400, 1844
SphI GCATGC 2 cut(s) 931, 1312
SseBI AGGCCT 2 cut(s) 340, 2309
SsiI CCGC 7 cut(s) 26, 125, 170, 830, 1514, 1688, 2208
SspMI CTAG 4 cut(s) 917, 1713, 1782, 2231
StuI AGGCCT 2 cut(s) 340, 2309
StyD4I CCNGG 5 cut(s) 444, 526, 1030, 1875, 2130
StyI CCWWGG 2 cut(s) 565, 1633
TaaI ACNGT 6 cut(s) 356, 999, 1073, 1469, 1795, 2034
TaiI ACGT 3 cut(s) 940, 1042, 1600
TaqI TCGA 4 cut(s) 207, 628, 1177, 1926
TauI GCSGC 2 cut(s) 1517, 2210
TfiI GAWTC 2 cut(s) 1301, 2196
TscAI CASTG 4 cut(s) 46, 339, 2013, 2241
TseFI GTSAC 2 cut(s) 1145, 1532
TseI GCWGC 3 cut(s) 719, 1865, 2239
Tsp45I GTSAC 2 cut(s) 1145, 1532
TspDTI ATGAA 7 cut(s) 17, 234, 270, 1029, 1269, 1608, 1788
TspGWI ACGGA 4 cut(s) 228, 1199, 1273, 1394
TspRI CASTG 4 cut(s) 46, 339, 2013, 2241
Vha464I CTTAAG 3 cut(s) 520, 1400, 1844
VpaK11BI GGWCC 3 cut(s) 761, 966, 1258
VspI ATTAAT 2 cut(s) 1614, 1737
XapI RAATTY 6 cut(s) 1016, 1228, 1348, 1659, 2135, 2226
XbaI TCTAGA 1 cut(s) 916
XceI RCATGY 3 cut(s) 931, 1312, 1332
XmnI GAANNNNTTC 1 cut(s) 1905
XspI CTAG 4 cut(s) 917, 1713, 1782, 2231
Zsp2I ATGCAT 2 cut(s) 1366, 1426
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.