SpoU rRNA Methylase family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G38020 |
| fragaria_vesca | FvH4_1g19321 FvH4_1g19321 FvH4_1g19321 FvH4_1g19321 |
| malus_domestica | MD01G1041100.v1.1 |
| prunus_persica | Prupe.6G204900_v2.0.a1 Prupe.6G204900_v2.0.a1 Prupe.6G204900_v2.0.a1 |
| pyrus_communis | pycom01g06880 |
| rosa_chinensis | RchiOBHm_Chr6g0269301 |
| rosa_laevigata | RLG00000017832 |
| rosa_multiflora | Rmu_co8055466.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00133020 |
| rosa_rugosa | Rorug02G0168800 Rorug02G0168900 |
| rosa_samantha | Rh2AG221100 Rh2BG231200 Rh2CG223500 Rh2DG227300 |
| rosa_wichuraiana | Rw2G017060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 292 |
| AcsI | RAATTY | 1 cut(s) | 152 |
| AgsI | TTSAA | 3 cut(s) | 110, 171, 298 |
| AluBI | AGCT | 3 cut(s) | 49, 130, 199 |
| AluI | AGCT | 3 cut(s) | 49, 130, 199 |
| ApoI | RAATTY | 1 cut(s) | 152 |
| BaeGI | GKGCMC | 1 cut(s) | 30 |
| BauI | CACGAG | 1 cut(s) | 10 |
| BbsI | GAAGAC | 2 cut(s) | 117, 201 |
| BccI | CCATC | 1 cut(s) | 269 |
| BpiI | GAAGAC | 2 cut(s) | 117, 201 |
| BpmI | CTGGAG | 1 cut(s) | 25 |
| Bse3DI | GCAATG | 1 cut(s) | 11 |
| BseGI | GGATG | 1 cut(s) | 91 |
| BseMI | GCAATG | 1 cut(s) | 11 |
| BseMII | CTCAG | 2 cut(s) | 36, 110 |
| BseSI | GKGCMC | 1 cut(s) | 30 |
| Bsp1286I | GDGCHC | 1 cut(s) | 30 |
| BspACI | CCGC | 1 cut(s) | 292 |
| BspCNI | CTCAG | 2 cut(s) | 35, 109 |
| BsrDI | GCAATG | 1 cut(s) | 11 |
| BssSI | CACGAG | 1 cut(s) | 10 |
| Bst2BI | CACGAG | 1 cut(s) | 10 |
| BstDEI | CTNAG | 3 cut(s) | 22, 56, 96 |
| BstF5I | GGATG | 1 cut(s) | 91 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 136 |
| BstSLI | GKGCMC | 1 cut(s) | 30 |
| BstV2I | GAAGAC | 2 cut(s) | 117, 201 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 230 |
| BtsCI | GGATG | 1 cut(s) | 91 |
| BtsI | GCAGTG | 1 cut(s) | 187 |
| BtsIMutI | CAGTG | 2 cut(s) | 30, 187 |
| CviAII | CATG | 3 cut(s) | 146, 230, 272 |
| CviJI | RGCY | 3 cut(s) | 49, 130, 199 |
| CviKI_1 | RGCY | 3 cut(s) | 49, 130, 199 |
| DdeI | CTNAG | 3 cut(s) | 22, 56, 96 |
| FaeI | CATG | 3 cut(s) | 149, 233, 275 |
| FaiI | YATR | 6 cut(s) | 117, 147, 158, 231, 257, 273 |
| FatI | CATG | 3 cut(s) | 145, 229, 271 |
| FokI | GGATG | 1 cut(s) | 78 |
| GsuI | CTGGAG | 1 cut(s) | 25 |
| Hin1II | CATG | 3 cut(s) | 149, 233, 275 |
| HindIII | AAGCTT | 2 cut(s) | 128, 197 |
| Hpy166II | GTNNAC | 1 cut(s) | 277 |
| Hpy188I | TCNGA | 1 cut(s) | 99 |
| Hpy188III | TCNNGA | 1 cut(s) | 42 |
| Hpy8I | GTNNAC | 1 cut(s) | 277 |
| HpyAV | CCTTC | 2 cut(s) | 150, 291 |
| HpyCH4V | TGCA | 2 cut(s) | 4, 9 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 136 |
| HpyF3I | CTNAG | 3 cut(s) | 22, 56, 96 |
| Hsp92II | CATG | 3 cut(s) | 149, 233, 275 |
| LpnPI | CCDG | 5 cut(s) | 55, 175, 218, 250, 291 |
| MboII | GAAGA | 3 cut(s) | 122, 201, 204 |
| MhlI | GDGCHC | 1 cut(s) | 30 |
| MluCI | AATT | 3 cut(s) | 77, 152, 298 |
| MnlI | CCTC | 3 cut(s) | 54, 105, 144 |
| MslI | CAYNNNNRTG | 2 cut(s) | 23, 228 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 136 |
| NlaIII | CATG | 3 cut(s) | 149, 233, 275 |
| RseI | CAYNNNNRTG | 2 cut(s) | 23, 228 |
| SduI | GDGCHC | 1 cut(s) | 30 |
| SetI | ASST | 4 cut(s) | 51, 132, 201, 269 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 23, 228 |
| Sse9I | AATT | 3 cut(s) | 77, 152, 298 |
| SsiI | CCGC | 1 cut(s) | 292 |
| TasI | AATT | 3 cut(s) | 77, 152, 298 |
| TscAI | CASTG | 2 cut(s) | 30, 194 |
| TspDTI | ATGAA | 2 cut(s) | 145, 260 |
| TspRI | CASTG | 2 cut(s) | 30, 194 |
| XapI | RAATTY | 1 cut(s) | 152 |