Transposase family tnp2
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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom11g14990 pycom16g04840 |
| rosa_laevigata | RLG00000015505 RLG00000015509 |
| rosa_multiflora | Rmu_co8359351.1_g000001 Rmu_sc0002500.1_g000004 Rmu_sc0004178.1_g000006 Rmu_sc0020641.1_g000001 Rmu_ssc0000144.1_g000008 |
| rosa_roxburghii | Rroxscaffold_2G00116500 |
| rosa_samantha | Rh1AG103200 Rh2AG206200 Rh4DG231600 Rh6BG154700 Rh6DG139900 |
| rosa_wichuraiana | Rw1G014030 Rw2G017010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 112 |
| AciI | CCGC | 1 cut(s) | 233 |
| AcsI | RAATTY | 1 cut(s) | 145 |
| AfaI | GTAC | 1 cut(s) | 321 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 238 |
| AflII | CTTAAG | 1 cut(s) | 323 |
| AgsI | TTSAA | 1 cut(s) | 301 |
| AluBI | AGCT | 4 cut(s) | 95, 286, 343, 440 |
| AluI | AGCT | 4 cut(s) | 95, 286, 343, 440 |
| AoxI | GGCC | 1 cut(s) | 23 |
| ApoI | RAATTY | 1 cut(s) | 145 |
| AsuHPI | GGTGA | 3 cut(s) | 172, 253, 413 |
| BccI | CCATC | 2 cut(s) | 32, 125 |
| BfaI | CTAG | 1 cut(s) | 27 |
| BfrI | CTTAAG | 1 cut(s) | 323 |
| BfuAI | ACCTGC | 1 cut(s) | 112 |
| BglII | AGATCT | 1 cut(s) | 327 |
| BmcAI | AGTACT | 1 cut(s) | 321 |
| BmiI | GGNNCC | 1 cut(s) | 126 |
| BpmI | CTGGAG | 1 cut(s) | 189 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 238 |
| Bse1I | ACTGG | 2 cut(s) | 47, 351 |
| BseGI | GGATG | 1 cut(s) | 43 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 238 |
| BseNI | ACTGG | 2 cut(s) | 47, 351 |
| BseYI | CCCAGC | 1 cut(s) | 58 |
| BshFI | GGCC | 1 cut(s) | 25 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 238 |
| BsnI | GGCC | 1 cut(s) | 25 |
| Bsp143I | GATC | 1 cut(s) | 327 |
| BspACI | CCGC | 1 cut(s) | 233 |
| BspANI | GGCC | 1 cut(s) | 25 |
| BspHI | TCATGA | 1 cut(s) | 199 |
| BspLI | GGNNCC | 1 cut(s) | 126 |
| BspMI | ACCTGC | 1 cut(s) | 112 |
| BspTI | CTTAAG | 1 cut(s) | 323 |
| BsrI | ACTGG | 2 cut(s) | 47, 351 |
| BssMI | GATC | 1 cut(s) | 327 |
| BstAFI | CTTAAG | 1 cut(s) | 323 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 68 |
| BstDEI | CTNAG | 2 cut(s) | 217, 436 |
| BstF5I | GGATG | 1 cut(s) | 43 |
| BstKTI | GATC | 1 cut(s) | 330 |
| BstMBI | GATC | 1 cut(s) | 327 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 68, 446 |
| BstX2I | RGATCY | 1 cut(s) | 327 |
| BstYI | RGATCY | 1 cut(s) | 327 |
| BsuRI | GGCC | 1 cut(s) | 25 |
| BtsCI | GGATG | 1 cut(s) | 43 |
| BveI | ACCTGC | 1 cut(s) | 112 |
| CciI | TCATGA | 1 cut(s) | 199 |
| Csp6I | GTAC | 1 cut(s) | 320 |
| CviAII | CATG | 5 cut(s) | 190, 200, 209, 267, 415 |
| CviJI | RGCY | 6 cut(s) | 25, 95, 275, 286, 343, 440 |
| CviKI_1 | RGCY | 6 cut(s) | 25, 95, 275, 286, 343, 440 |
| CviQI | GTAC | 1 cut(s) | 320 |
| DdeI | CTNAG | 2 cut(s) | 217, 436 |
| DpnI | GATC | 1 cut(s) | 329 |
| DpnII | GATC | 1 cut(s) | 327 |
| Eco32I | GATATC | 1 cut(s) | 88 |
| EcoRV | GATATC | 1 cut(s) | 88 |
| FaeI | CATG | 5 cut(s) | 193, 203, 212, 270, 418 |
| FatI | CATG | 5 cut(s) | 189, 199, 208, 266, 414 |
| FauI | CCCGC | 1 cut(s) | 240 |
| FokI | GGATG | 1 cut(s) | 50 |
| FspBI | CTAG | 1 cut(s) | 27 |
| GsaI | CCCAGC | 1 cut(s) | 62 |
| GsuI | CTGGAG | 1 cut(s) | 189 |
| HaeIII | GGCC | 1 cut(s) | 25 |
| Hin1II | CATG | 5 cut(s) | 193, 203, 212, 270, 418 |
| HphI | GGTGA | 3 cut(s) | 172, 253, 413 |
| Hpy166II | GTNNAC | 2 cut(s) | 44, 421 |
| Hpy188I | TCNGA | 1 cut(s) | 334 |
| Hpy188III | TCNNGA | 2 cut(s) | 128, 200 |
| Hpy8I | GTNNAC | 2 cut(s) | 44, 421 |
| HpyCH4V | TGCA | 4 cut(s) | 71, 121, 143, 375 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 68, 446 |
| HpyF3I | CTNAG | 2 cut(s) | 217, 436 |
| Hsp92II | CATG | 5 cut(s) | 193, 203, 212, 270, 418 |
| Kzo9I | GATC | 1 cut(s) | 327 |
| LpnPI | CCDG | 9 cut(s) | 60, 72, 107, 138, 141, 153, 171, 332, 411 |
| MaeI | CTAG | 1 cut(s) | 27 |
| MaeIII | GTNAC | 1 cut(s) | 108 |
| MalI | GATC | 1 cut(s) | 329 |
| MboI | GATC | 1 cut(s) | 327 |
| MflI | RGATCY | 1 cut(s) | 327 |
| MluCI | AATT | 5 cut(s) | 116, 145, 279, 305, 357 |
| MmeI | TCCRAC | 1 cut(s) | 360 |
| MnlI | CCTC | 4 cut(s) | 3, 25, 164, 405 |
| MseI | TTAA | 1 cut(s) | 324 |
| MspCI | CTTAAG | 1 cut(s) | 323 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 68, 446 |
| NdeII | GATC | 1 cut(s) | 327 |
| NlaIII | CATG | 5 cut(s) | 193, 203, 212, 270, 418 |
| NlaIV | GGNNCC | 1 cut(s) | 126 |
| PagI | TCATGA | 1 cut(s) | 199 |
| PspFI | CCCAGC | 1 cut(s) | 58 |
| PspN4I | GGNNCC | 1 cut(s) | 126 |
| PsuI | RGATCY | 1 cut(s) | 327 |
| RsaI | GTAC | 1 cut(s) | 321 |
| RsaNI | GTAC | 1 cut(s) | 320 |
| SaqAI | TTAA | 1 cut(s) | 324 |
| Sau3AI | GATC | 1 cut(s) | 327 |
| ScaI | AGTACT | 1 cut(s) | 321 |
| SetI | ASST | 9 cut(s) | 36, 67, 97, 126, 157, 288, 345, 426, 442 |
| SmlI | CTYRAG | 1 cut(s) | 323 |
| SmoI | CTYRAG | 1 cut(s) | 323 |
| Sse9I | AATT | 5 cut(s) | 116, 145, 279, 305, 357 |
| SsiI | CCGC | 1 cut(s) | 233 |
| SspI | AATATT | 1 cut(s) | 390 |
| SspMI | CTAG | 1 cut(s) | 27 |
| TaqI | TCGA | 1 cut(s) | 408 |
| TasI | AATT | 5 cut(s) | 116, 145, 279, 305, 357 |
| TatI | WGTACW | 1 cut(s) | 319 |
| Tru1I | TTAA | 1 cut(s) | 324 |
| Tru9I | TTAA | 1 cut(s) | 324 |
| TspDTI | ATGAA | 1 cut(s) | 206 |
| Vha464I | CTTAAG | 1 cut(s) | 323 |
| XapI | RAATTY | 1 cut(s) | 145 |
| XspI | CTAG | 1 cut(s) | 27 |
| ZrmI | AGTACT | 1 cut(s) | 321 |