Rmu_sc0000295.1_g000007
NAC Family

inactive purple acid phosphatase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000295.1
OG0007682
Physical Location & Seq
Reverse (-)
31470 .. 39841
8372 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1812 bp
atgatgatgggaagaagggtgagggtgttgtgctgcttcactacctttacatatgtgtatatctactcccttgtcgtggcggctttgccaaccataccggacggtgatcaccatctgctactgcccggtgctggccagtcattcaagatcgctctctttgccgacctgcatttcggagaggccgcctccaccgactggggtccactccaagacgtcaactccctcagagtcatgtccactgtgcttgatcatgaaatcccagattttgttatctatcttggagatgtcatcacagccaacaatatagcaattaaaaatgcaagcttgtattgggatcaagcaatttctccaacaagagccagaggaattccttgggccagtgtttttggaaaccatgatgatgcggcatttgagtggccgatggagtggttttcaggtcctggaattcctgaaatttgttgccctgtagccaattcctcatgctcaggagaagaagactgtagcttcaaaggcacacatcgtctggagttaatgaaaaatgagattgcacttagctctctttcatattctcgatatggtcctaaagaactttggcctagtgtatctaactatgtcctgcaagtttcttcgtcaaacaatcccgggtcacctgtagcatttttatatttcctagattctggtggtggttcctacccagaagttttatcaagtgcccaagcagaatggttccgtcggaaagctctagagatcaaccctgattcaagggtgcctgagctaatcttttggcatataccaagtcgtgcttacaagaaagcggctccaaggtttggtatacacaagccttgtgtcggttcaattaataaggagagagtagcaactcaagatgctgaaaatggcatcatgaaacttttggctgaaagggtttctgtcaaggcaatatttgtaggacacaaccatggattagactggtgctgcccttataagaaactgtggctatgctttgctcggcatactggttatggtggctatggaaactgggctagaggagctagaatcatagaaatcacccagcagcctttctctattaaatcttggattagaatggaggatggtacatcagaaagagcatttcgtgaagctacagaagagcagaaaaaacatgctttgactgttgcaatagcaacagcggttgcagccaaggcagctgtagctgctgcccaagctgcagctgaggttgtgcgcctaacgggagcttcacaatctttccaccatttcacaaagtttgacaggaacttggctgccattaaaattcaaagtgcttatcgctcgcatcttgcaaggaaagcattgcgagccttgcgaggactggtcaggcttcaagccatagttcgtggtcgagctgtgagacgtcaagcactcatatctttgaagcggttgccatctaacagaaaagcgcagacagaggttacgaaaaggagcatttctaccgtagatgcgagatgcaacggtagcgaaaagaagcatcttggcaggccaaaaggggagttggatgagaaagaaataacacttttatgcagcagcagacagataaggtgggatgacagtctaatttcaaaggaggacattgaagcaatatggctaagaaagcaagaggccagaattaaaagagaacggatgaagaaatactcgttctctctccgggaaagccagaatgtgaaaatgttagaagattcaaatggtagtactggtggaacgtttggaactgttaaactgagacatttgagaaatgaatattcagtggaaggtcaatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0003993 GO:0005575 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0042578 GO:0044237
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Metallophos

Protein Analysis

603

Amino Acids

67.45

Weight (kDa)

9.39

Isoelectric Point (pI)

41.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Metallophos PF00149 48 - 319 1e-09 Calcineurin-like phosphoesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 981
AatII GACGTC 2 cut(s) 216, 1411
Acc36I ACCTGC 1 cut(s) 174
AccB1I GGYRCC 1 cut(s) 766
AccB7I CCANNNNNTGG 2 cut(s) 195, 827
AccI GTMKAC 1 cut(s) 832
AciI CCGC 6 cut(s) 80, 183, 404, 815, 1187, 1432
AclI AACGTT 1 cut(s) 1754
AclWI GGATC 1 cut(s) 342
AcoI YGGCCR 2 cut(s) 133, 416
AcsI RAATTY 4 cut(s) 366, 444, 453, 1308
AcyI GRCGYC 2 cut(s) 213, 1408
AfaI GTAC 2 cut(s) 1114, 1744
AfiI CCNNNNNNNGG 5 cut(s) 76, 131, 195, 827, 848
AjnI CCWGG 1 cut(s) 439
Alw26I GTCTC 2 cut(s) 1399, 1768
AlwI GGATC 1 cut(s) 342
AlwNI CAGNNNCTG 1 cut(s) 440
Ama87I CYCGRG 1 cut(s) 641
AoxI GGCC 7 cut(s) 133, 180, 375, 416, 593, 1532, 1653
ApoI RAATTY 4 cut(s) 366, 444, 453, 1308
ArsI GACNNNNNNTTYG 2 cut(s) 155, 187
AseI ATTAAT 1 cut(s) 858
AspLEI GCGC 2 cut(s) 1242, 1456
AspS9I GGNCC 4 cut(s) 200, 375, 437, 578
AsuC2I CCSGG 4 cut(s) 126, 642, 643, 1700
AsuHPI GGTGA 5 cut(s) 31, 101, 116, 639, 1057
AvaI CYCGRG 1 cut(s) 641
AvaII GGWCC 3 cut(s) 200, 437, 578
BaeGI GKGCMC 1 cut(s) 715
BalI TGGCCA 1 cut(s) 135
BanI GGYRCC 1 cut(s) 766
BbsI GAAGAC 1 cut(s) 501
BbvCI CCTCAGC 1 cut(s) 1230
BccI CCATC 4 cut(s) 120, 415, 1103, 1447
BciT130I CCWGG 1 cut(s) 441
BclI TGATCA 2 cut(s) 106, 247
BcnI CCSGG 4 cut(s) 126, 642, 643, 1700
BcoDI GTCTC 2 cut(s) 1399, 1768
BfaI CTAG 5 cut(s) 597, 671, 743, 1041, 1050
BfmI CTRYAG 6 cut(s) 465, 499, 651, 1140, 1206, 1224
BfuAI ACCTGC 1 cut(s) 174
BmcAI AGTACT 1 cut(s) 1744
Bme1390I CCNGG 5 cut(s) 126, 441, 642, 643, 1700
Bme18I GGWCC 3 cut(s) 200, 437, 578
BmeT110I CYCGRG 1 cut(s) 641
BmgT120I GGNCC 4 cut(s) 200, 375, 437, 578
BmiI GGNNCC 5 cut(s) 201, 688, 728, 768, 819
BmrFI CCNGG 5 cut(s) 126, 441, 642, 643, 1700
BmrI ACTGGG 2 cut(s) 205, 1045
BmsI GCATC 7 cut(s) 391, 874, 906, 1339, 1483, 1490, 1531
BmuI ACTGGG 2 cut(s) 205, 1045
BoxI GACNNNNGTC 1 cut(s) 198
BpiI GAAGAC 1 cut(s) 501
BplI GAGNNNNNCTC 2 cut(s) 170, 202
BpmI CTGGAG 1 cut(s) 545
Bpu10I CCTNAGC 3 cut(s) 484, 771, 1230
BpuEI CTTGAG 1 cut(s) 864
BpuMI CCSGG 4 cut(s) 126, 642, 643, 1700
BsaBI GATNNNNATC 1 cut(s) 111
BsaHI GRCGYC 2 cut(s) 213, 1408
BsaJI CCNNGG 5 cut(s) 371, 641, 821, 955, 1197
BsaWI WCCGGW 1 cut(s) 97
BsaXI ACNNNNNCTCC 2 cut(s) 203, 233
Bsc4I CCNNNNNNNGG 5 cut(s) 76, 131, 195, 827, 848
Bse1I ACTGG 8 cut(s) 136, 200, 378, 971, 1018, 1040, 1371, 1750
Bse3DI GCAATG 1 cut(s) 1346
Bse8I GATNNNNATC 1 cut(s) 111
BseBI CCWGG 1 cut(s) 441
BseDI CCNNGG 5 cut(s) 371, 641, 821, 955, 1197
BseGI GGATG 4 cut(s) 1114, 1555, 1603, 1680
BseJI GATNNNNATC 1 cut(s) 111
BseLI CCNNNNNNNGG 5 cut(s) 76, 131, 195, 827, 848
BseMI GCAATG 1 cut(s) 1346
BseMII CTCAG 5 cut(s) 238, 498, 762, 1221, 1763
BseNI ACTGG 8 cut(s) 136, 200, 378, 971, 1018, 1040, 1371, 1750
BseRI GAGGAG 1 cut(s) 1059
BseSI GKGCMC 1 cut(s) 715
BseYI CCCAGC 1 cut(s) 1068
BshFI GGCC 7 cut(s) 135, 182, 377, 418, 595, 1534, 1655
BshNI GGYRCC 1 cut(s) 766
BsiHKCI CYCGRG 1 cut(s) 641
BsiSI CCGG 4 cut(s) 98, 126, 642, 1699
BslI CCNNNNNNNGG 5 cut(s) 76, 131, 195, 827, 848
BsmAI GTCTC 2 cut(s) 1399, 1768
BsmBI CGTCTC 1 cut(s) 1399
BsnI GGCC 7 cut(s) 135, 182, 377, 418, 595, 1534, 1655
BsoBI CYCGRG 1 cut(s) 641
Bsp1286I GDGCHC 1 cut(s) 715
Bsp143I GATC 5 cut(s) 106, 147, 247, 334, 747
Bsp19I CCATGG 1 cut(s) 955
BspACI CCGC 6 cut(s) 80, 183, 404, 815, 1187, 1432
BspANI GGCC 7 cut(s) 135, 182, 377, 418, 595, 1534, 1655
BspCNI CTCAG 5 cut(s) 237, 497, 763, 1222, 1764
BspHI TCATGA 2 cut(s) 250, 900
BspLI GGNNCC 5 cut(s) 201, 688, 728, 768, 819
BspMAI CTGCAG 1 cut(s) 1228
BspMI ACCTGC 1 cut(s) 174
BspPI GGATC 1 cut(s) 342
BspQI GCTCTTC 1 cut(s) 1140
BspT107I GGYRCC 1 cut(s) 766
BsrDI GCAATG 1 cut(s) 1346
BsrI ACTGG 8 cut(s) 136, 200, 378, 971, 1018, 1040, 1371, 1750
BssECI CCNNGG 5 cut(s) 371, 641, 821, 955, 1197
BssMI GATC 5 cut(s) 106, 147, 247, 334, 747
BssNAI GTATAC 1 cut(s) 833
BssNI GRCGYC 2 cut(s) 213, 1408
BssT1I CCWWGG 4 cut(s) 371, 821, 955, 1197
Bst1107I GTATAC 1 cut(s) 833
Bst2UI CCWGG 1 cut(s) 441
Bst4CI ACNGT 9 cut(s) 104, 241, 500, 990, 1171, 1489, 1508, 1604, 1765
Bst6I CTCTTC 1 cut(s) 1140
BstACI GRCGYC 2 cut(s) 213, 1408
BstC8I GCNNGC 5 cut(s) 133, 322, 1328, 1353, 1532
BstDEI CTNAG 7 cut(s) 224, 484, 551, 771, 1230, 1640, 1772
BstDSI CCRYGG 1 cut(s) 955
BstEII GGTNACC 1 cut(s) 645
BstF5I GGATG 4 cut(s) 1114, 1555, 1603, 1680
BstHHI GCGC 2 cut(s) 1242, 1456
BstKTI GATC 5 cut(s) 109, 150, 250, 337, 750
BstMAI GTCTC 2 cut(s) 1399, 1768
BstMBI GATC 5 cut(s) 106, 147, 247, 334, 747
BstNI CCWGG 1 cut(s) 441
BstNSI RCATGY 1 cut(s) 1163
BstPAI GACNNNNGTC 1 cut(s) 198
BstPI GGTNACC 1 cut(s) 645
BstSCI CCNGG 5 cut(s) 124, 439, 640, 641, 1698
BstSFI CTRYAG 6 cut(s) 465, 499, 651, 1140, 1206, 1224
BstSLI GKGCMC 1 cut(s) 715
BstV2I GAAGAC 1 cut(s) 501
BstZ17I GTATAC 1 cut(s) 833
BsuRI GGCC 7 cut(s) 135, 182, 377, 418, 595, 1534, 1655
BtgI CCRYGG 1 cut(s) 955
BtsCI GGATG 4 cut(s) 1114, 1555, 1603, 1680
BtsIMutI CAGTG 3 cut(s) 237, 385, 1803
BveI ACCTGC 1 cut(s) 174
Cac8I GCNNGC 5 cut(s) 133, 322, 1328, 1353, 1532
CaiI CAGNNNCTG 1 cut(s) 440
CciI TCATGA 2 cut(s) 250, 900
CfoI GCGC 2 cut(s) 1242, 1456
Cfr13I GGNCC 4 cut(s) 200, 375, 437, 578
Cfr9I CCCGGG 1 cut(s) 641
Csp6I GTAC 2 cut(s) 1113, 1743
CspCI CAANNNNNGTGG 2 cut(s) 226, 261
CviAII CATG 7 cut(s) 232, 251, 395, 480, 901, 956, 1160
CviQI GTAC 2 cut(s) 1113, 1743
DdeI CTNAG 7 cut(s) 224, 484, 551, 771, 1230, 1640, 1772
DpnI GATC 5 cut(s) 108, 149, 249, 336, 749
DpnII GATC 5 cut(s) 106, 147, 247, 334, 747
EaeI YGGCCR 2 cut(s) 133, 416
Eam1104I CTCTTC 1 cut(s) 1140
EarI CTCTTC 1 cut(s) 1140
Eco130I CCWWGG 4 cut(s) 371, 821, 955, 1197
Eco47I GGWCC 3 cut(s) 200, 437, 578
Eco88I CYCGRG 1 cut(s) 641
Eco91I GGTNACC 1 cut(s) 645
EcoO109I RGGNCCY 1 cut(s) 437
EcoO65I GGTNACC 1 cut(s) 645
EcoRI GAATTC 2 cut(s) 366, 444
EcoRII CCWGG 1 cut(s) 439
EcoT14I CCWWGG 4 cut(s) 371, 821, 955, 1197
ErhI CCWWGG 4 cut(s) 371, 821, 955, 1197
Esp3I CGTCTC 1 cut(s) 1399
FaeI CATG 7 cut(s) 235, 254, 398, 483, 904, 959, 1163
FalI AAGNNNNNCTT 2 cut(s) 787, 819
FatI CATG 7 cut(s) 231, 250, 394, 479, 900, 955, 1159
FauNDI CATATG 1 cut(s) 52
FbaI TGATCA 2 cut(s) 106, 247
FblI GTMKAC 1 cut(s) 832
FokI GGATG 4 cut(s) 1121, 1562, 1610, 1687
FspBI CTAG 5 cut(s) 597, 671, 743, 1041, 1050
GlaI GCGC 2 cut(s) 1241, 1455
GsaI CCCAGC 1 cut(s) 1072
GsuI CTGGAG 1 cut(s) 545
HaeIII GGCC 7 cut(s) 135, 182, 377, 418, 595, 1534, 1655
HapII CCGG 4 cut(s) 98, 126, 642, 1699
HhaI GCGC 2 cut(s) 1242, 1456
Hin1I GRCGYC 2 cut(s) 213, 1408
Hin1II CATG 7 cut(s) 235, 254, 398, 483, 904, 959, 1163
Hin6I GCGC 2 cut(s) 1240, 1454
HinP1I GCGC 2 cut(s) 1240, 1454
HincII GTYRAC 1 cut(s) 217
HindII GTYRAC 1 cut(s) 217
HindIII AAGCTT 1 cut(s) 322
HinfI GANTC 5 cut(s) 228, 674, 758, 1053, 1730
HpaII CCGG 4 cut(s) 98, 126, 642, 1699
HphI GGTGA 5 cut(s) 31, 101, 116, 639, 1057
Hpy166II GTNNAC 4 cut(s) 203, 217, 237, 833
Hpy188I TCNGA 4 cut(s) 176, 227, 735, 1120
Hpy8I GTNNAC 4 cut(s) 203, 217, 237, 833
Hpy99I CGWCG 1 cut(s) 735
HpyAV CCTTC 2 cut(s) 9, 1796
HpyCH4III ACNGT 9 cut(s) 104, 241, 500, 990, 1171, 1489, 1508, 1604, 1765
HpyCH4IV ACGT 3 cut(s) 213, 1408, 1754
HpyF3I CTNAG 7 cut(s) 224, 484, 551, 771, 1230, 1640, 1772
HpySE526I ACGT 3 cut(s) 213, 1408, 1754
Hsp92I GRCGYC 2 cut(s) 213, 1408
Hsp92II CATG 7 cut(s) 235, 254, 398, 483, 904, 959, 1163
HspAI GCGC 2 cut(s) 1240, 1454
Ksp22I TGATCA 2 cut(s) 106, 247
Kzo9I GATC 5 cut(s) 106, 147, 247, 334, 747
LguI GCTCTTC 1 cut(s) 1140
LmnI GCTCC 4 cut(s) 823, 1046, 1250, 1476
LweI GCATC 7 cut(s) 391, 874, 906, 1339, 1483, 1490, 1531
MaeI CTAG 5 cut(s) 597, 671, 743, 1041, 1050
MaeII ACGT 3 cut(s) 213, 1408, 1754
MaeIII GTNAC 2 cut(s) 645, 1465
MalI GATC 5 cut(s) 108, 149, 249, 336, 749
MboI GATC 5 cut(s) 106, 147, 247, 334, 747
MboII GAAGA 7 cut(s) 24, 503, 506, 618, 1157, 1690, 1739
MhlI GDGCHC 1 cut(s) 715
MlsI TGGCCA 1 cut(s) 135
MluNI TGGCCA 1 cut(s) 135
MlyI GAGTC 1 cut(s) 237
MmeI TCCRAC 3 cut(s) 374, 713, 1527
Mox20I TGGCCA 1 cut(s) 135
MscI TGGCCA 1 cut(s) 135
MseI TTAA 7 cut(s) 312, 530, 858, 1086, 1305, 1662, 1767
MslI CAYNNNNRTG 4 cut(s) 399, 412, 954, 1570
Msp20I TGGCCA 1 cut(s) 135
MspA1I CMGCKG 3 cut(s) 1187, 1205, 1229
MspI CCGG 4 cut(s) 98, 126, 642, 1699
MspR9I CCNGG 5 cut(s) 126, 441, 642, 643, 1700
MvaI CCWGG 1 cut(s) 441
NciI CCSGG 4 cut(s) 126, 642, 643, 1700
NcoI CCATGG 1 cut(s) 955
NdeI CATATG 1 cut(s) 52
NdeII GATC 5 cut(s) 106, 147, 247, 334, 747
NlaIII CATG 7 cut(s) 235, 254, 398, 483, 904, 959, 1163
NlaIV GGNNCC 5 cut(s) 201, 688, 728, 768, 819
NmeAIII GCCGAG 1 cut(s) 985
NmuCI GTSAC 1 cut(s) 645
NspI RCATGY 1 cut(s) 1163
PagI TCATGA 2 cut(s) 250, 900
PciSI GCTCTTC 1 cut(s) 1140
PfeI GAWTC 4 cut(s) 674, 758, 1053, 1730
PflMI CCANNNNNTGG 2 cut(s) 195, 827
PfoI TCCNGGA 2 cut(s) 439, 1698
PleI GAGTC 1 cut(s) 236
PpsI GAGTC 1 cut(s) 236
PpuMI RGGWCCY 1 cut(s) 437
PshAI GACNNNNGTC 1 cut(s) 198
PshBI ATTAAT 1 cut(s) 858
PsiI TTATAA 1 cut(s) 981
Psp1406I AACGTT 1 cut(s) 1754
Psp5II RGGWCCY 1 cut(s) 437
Psp6I CCWGG 1 cut(s) 439
PspEI GGTNACC 1 cut(s) 645
PspFI CCCAGC 1 cut(s) 1068
PspGI CCWGG 1 cut(s) 439
PspN4I GGNNCC 5 cut(s) 201, 688, 728, 768, 819
PspPI GGNCC 4 cut(s) 200, 375, 437, 578
PspPPI RGGWCCY 1 cut(s) 437
PstI CTGCAG 1 cut(s) 1228
PstNI CAGNNNCTG 1 cut(s) 440
PvuII CAGCTG 2 cut(s) 1205, 1229
RsaI GTAC 2 cut(s) 1114, 1744
RsaNI GTAC 2 cut(s) 1113, 1743
RseI CAYNNNNRTG 4 cut(s) 399, 412, 954, 1570
SapI GCTCTTC 1 cut(s) 1140
SaqAI TTAA 7 cut(s) 312, 530, 858, 1086, 1305, 1662, 1767
Sau3AI GATC 5 cut(s) 106, 147, 247, 334, 747
Sau96I GGNCC 4 cut(s) 200, 375, 437, 578
ScaI AGTACT 1 cut(s) 1744
SchI GAGTC 1 cut(s) 237
ScrFI CCNGG 5 cut(s) 126, 441, 642, 643, 1700
SduI GDGCHC 1 cut(s) 715
SfaNI GCATC 7 cut(s) 391, 874, 906, 1339, 1483, 1490, 1531
SfcI CTRYAG 6 cut(s) 465, 499, 651, 1140, 1206, 1224
SinI GGWCC 3 cut(s) 200, 437, 578
SmaI CCCGGG 1 cut(s) 643
SmiMI CAYNNNNRTG 4 cut(s) 399, 412, 954, 1570
SmlI CTYRAG 1 cut(s) 879
SmoI CTYRAG 1 cut(s) 879
SsiI CCGC 6 cut(s) 80, 183, 404, 815, 1187, 1432
SspI AATATT 2 cut(s) 939, 1793
SspMI CTAG 5 cut(s) 597, 671, 743, 1041, 1050
StyD4I CCNGG 5 cut(s) 124, 439, 640, 641, 1698
StyI CCWWGG 4 cut(s) 371, 821, 955, 1197
TaaI ACNGT 9 cut(s) 104, 241, 500, 990, 1171, 1489, 1508, 1604, 1765
TaiI ACGT 3 cut(s) 216, 1411, 1757
TaqI TCGA 2 cut(s) 571, 1396
TatI WGTACW 1 cut(s) 1742
TauI GCSGC 4 cut(s) 83, 185, 407, 818
TfiI GAWTC 4 cut(s) 674, 758, 1053, 1730
Tru1I TTAA 7 cut(s) 312, 530, 858, 1086, 1305, 1662, 1767
Tru9I TTAA 7 cut(s) 312, 530, 858, 1086, 1305, 1662, 1767
TscAI CASTG 3 cut(s) 244, 385, 1803
TseFI GTSAC 1 cut(s) 645
Tsp45I GTSAC 1 cut(s) 645
TspDTI ATGAA 6 cut(s) 267, 548, 552, 917, 1691, 1803
TspGWI ACGGA 2 cut(s) 719, 1687
TspMI CCCGGG 1 cut(s) 641
TspRI CASTG 3 cut(s) 244, 385, 1803
Van91I CCANNNNNTGG 2 cut(s) 195, 827
VpaK11BI GGWCC 3 cut(s) 200, 437, 578
VspI ATTAAT 1 cut(s) 858
XapI RAATTY 4 cut(s) 366, 444, 453, 1308
XbaI TCTAGA 1 cut(s) 742
XceI RCATGY 1 cut(s) 1163
XmaI CCCGGG 1 cut(s) 641
XmiI GTMKAC 1 cut(s) 832
XspI CTAG 5 cut(s) 597, 671, 743, 1041, 1050
ZraI GACGTC 2 cut(s) 214, 1409
ZrmI AGTACT 1 cut(s) 1744
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.