Rmu_sc0000367.1_g000014

P-loop NTPase domain-containing protein LPA1 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000367.1
OG0004419
Physical Location & Seq
Reverse (-)
62383 .. 73791
11409 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2532 bp
atgccgagtcagactgagtggaaccgccaactaccaagctctccggtaaagccagtcgttcgttccagggttcgagatggacccggttgtctatcattatctgatggtggggtgtgcgaggaattcggattgggatggggtgtttcggcggcggcgtcatggtcgacgatgagagggacggcggagaactgtgttggaggggaacaaacttcgccagacagccccgctgatgccgacaccgacgatgttgttgagattggacaagtattagatttgaaggagaaggggaaggttgcagaggagatggagggagatttgaaggagaaggggaaggttgcagaggagatggagggagtgttatcccagacacaaaacacacgcacggacacaacagtcaatcccacaccgattttcagagagatgagtgagtcggcgaaggttttgtacatagtggtggtggatggcgaggaagcgagagagaaagggaaagagtcttttcgatatacgcgtccggttttgcagagctctctgcaactcatgggatgcaaacctcgacacgccttcaagattagtcaacgagtttttgaattgataagaaacgtaagttcatgtaatgccttgcttccggacgggacagagaatgtttcccccagtaaagctgaggcttgcaagcatatggtttcagggaaagatcatagaagtaagagtgtaccatttgaaatgtacaaaacacgtacgactgttgtagttaggagagaaacttacttggatgttgtttgtgatgctctggctgagtacaagtatgttggtccaaatcagagggcagacttagttttggcatgcagaattcgagaacggaaggaatctgtaacagtactgttgtgcggcaccagtggctgtggaaaatctactttgtcttcattgctgggtagtaggttgggaatcacaactgtgatatctaccgactcgattcggcatatgatgaggagtttcgcagatgagaagcaaaatcctttactatgggcttcaacctatcatgcaggggagtgtttagatccagtggcagttgcagaagcaaaagccaaaaagaaagccaaaaaatcagctggaagttcacattcactttctaaagatggaatagttgatggctctatgtcagacgctggttcgagtactgctgaattgattggtccaaagcagatggccattgaaggattcaaggcacaaagtgagatggtaattgacagtcttgaccgtcttattactgcatgggaggaaagaaaagaatcagttattgtagaaggtgttcacttaagccttaattttgtgatggggcttatgaagaaacacccttcgatcataccattcatgatatttatcacaaatgaggataagcacttggagagatttgcagtacgtgcaaagtatatgacactggacccagcaaagaacaaatatgtgaagtacatccgaaacatcagaacaattcaagaatatctctgccagagggctgacaagcatcttgtccccaaaattaacaacactaatgttgacaagagtgtggctgcaatccatgcaacagtctttagctgcctccgtaggcgtgaagcaggggaacaactttatgatcccacgagaaatacagtaaccgtagtggatgaggagtataggaaccagcgtgcagccaattctttgagttcaaaggggatgtttcaacttatccagagaaaagggtcatctaggcatctgatggctcttgtaaatactgatggatctgtagcaaaggcttggcctgttgattcagtcgatcgtaatgggaagcctatattctgccatgggactgagatggagattggcagtgcagagcaagtgaatcttcagtttggtctctatggtttaagcgcttggcccaaagatggtggcccaagctgtgctggaagtgttgatgggtcaagggctgatgatactgagactgtaagtaggcatttctcttcttgctgcagctcaccacgatcggagggacctgccaaggagctgaaggaggacaactcggtgcatggcagcgatgaagaggttgatgaatcagctgatataggcagtgatgaggaattaagtgatgatgatgacaaacaagttgaagaagagatagggtcagtggatgaggagtctacgaaatcagatgaagagtatgaagacctggcaatgcaggacgttcaggggaatggatactggtcagatgatggtgctacggagcgcaagcttaagatattccctgttgctgagcacccatcagccaataaggatgtggataagtatcgccagaacctggatcttttccttagaactagaaacgagtcattttctgaaccactatgttcatatacttctctctttatggagaagaatgagatgacaatgccgtgctctggcaatatgaaaattagaaaacgccggtcccttagcattccagcattgggaaggcatgggtcaaaaacaaggggtcccatactttctggtgcccctcagtgctaa

Protein Analysis

843

Amino Acids

92.95

Weight (kDa)

5.7

Isoelectric Point (pI)

42.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA_33 PF13671 292 - 338 9e-06 AAA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 87, 392
Acc36I ACCTGC 1 cut(s) 2032
AccB1I GGYRCC 2 cut(s) 887, 2516
AccB7I CCANNNNNTGG 1 cut(s) 2326
AccI GTMKAC 2 cut(s) 164, 2168
AccII CGCG 1 cut(s) 508
AccIII TCCGGA 1 cut(s) 625
AciI CCGC 6 cut(s) 25, 149, 152, 182, 225, 885
AclWI GGATC 4 cut(s) 1049, 1622, 1780, 2337
AcoI YGGCCR 1 cut(s) 1203
AcsI RAATTY 2 cut(s) 122, 846
AcuI CTGAAG 2 cut(s) 1862, 2057
AcyI GRCGYC 1 cut(s) 155
AdeI CACNNNGTG 1 cut(s) 1229
AfaI GTAC 9 cut(s) 446, 711, 725, 736, 797, 876, 1174, 1416, 1466
AfeI AGCGCT 1 cut(s) 1903
AfiI CCNNNNNNNGG 4 cut(s) 1916, 2326, 2426, 2474
AflII CTTAAG 2 cut(s) 1312, 2261
AflIII ACRYGT 2 cut(s) 506, 731
AjnI CCWGG 3 cut(s) 65, 2196, 2325
AleI CACNNNNGTG 1 cut(s) 950
Alw21I GWGCWC 3 cut(s) 527, 2286, 2426
Alw26I GTCTC 2 cut(s) 1892, 1964
AlwI GGATC 4 cut(s) 1049, 1622, 1780, 2337
AlwNI CAGNNNCTG 3 cut(s) 897, 1163, 2326
Aor13HI TCCGGA 1 cut(s) 625
Aor51HI AGCGCT 1 cut(s) 1903
AoxI GGCC 4 cut(s) 1203, 1790, 1907, 1921
ApeKI GCWGC 6 cut(s) 1565, 1590, 1682, 1998, 2001, 2061
ApoI RAATTY 2 cut(s) 122, 846
Asp700I GAANNNNTTC 1 cut(s) 1305
AspLEI GCGC 2 cut(s) 1904, 2256
AspS9I GGNCC 9 cut(s) 80, 809, 1190, 1438, 1908, 1922, 2021, 2454, 2501
AsuC2I CCSGG 1 cut(s) 84
AsuHPI GGTGA 1 cut(s) 1998
AvaII GGWCC 7 cut(s) 80, 809, 1190, 1438, 2021, 2454, 2501
BaeGI GKGCMC 1 cut(s) 2521
BalI TGGCCA 1 cut(s) 1205
BanI GGYRCC 2 cut(s) 887, 2516
BanII GRGCYC 1 cut(s) 527
BarI GAAGNNNNNNTAC 2 cut(s) 428, 460
BauI CACGAG 1 cut(s) 1633
BbsI GAAGAC 2 cut(s) 909, 2199
Bbv12I GWGCWC 3 cut(s) 527, 2286, 2426
BbvCI CCTCAGC 1 cut(s) 660
BbvI GCAGC 6 cut(s) 1552, 1577, 1694, 1985, 2013, 2073
BceAI ACGGC 2 cut(s) 195, 2404
BciT130I CCWGG 3 cut(s) 67, 2198, 2327
BciVI GTATCC 1 cut(s) 2219
BcnI CCSGG 1 cut(s) 84
BcoDI GTCTC 2 cut(s) 1892, 1964
BfaI CTAG 2 cut(s) 1740, 2346
BfmI CTRYAG 2 cut(s) 1776, 1999
BfoI RGCGCY 1 cut(s) 1905
BfrI CTTAAG 2 cut(s) 1312, 2261
BfuAI ACCTGC 1 cut(s) 2032
BfuI GTATCC 1 cut(s) 2219
BisI GCNGC 9 cut(s) 150, 153, 886, 1566, 1591, 1683, 1999, 2002, 2062
BlpI GCTNAGC 1 cut(s) 2280
BlsI GCNGC 9 cut(s) 151, 154, 887, 1567, 1592, 1684, 2000, 2003, 2063
BmcAI AGTACT 2 cut(s) 876, 1174
Bme1390I CCNGG 4 cut(s) 67, 84, 2198, 2327
Bme18I GGWCC 7 cut(s) 80, 809, 1190, 1438, 2021, 2454, 2501
BmgT120I GGNCC 9 cut(s) 80, 809, 1190, 1438, 1908, 1922, 2021, 2454, 2501
BmrFI CCNGG 4 cut(s) 67, 84, 2198, 2327
BmrI ACTGGG 1 cut(s) 645
BmsI GCATC 5 cut(s) 220, 533, 772, 1528, 1753
BmuI ACTGGG 1 cut(s) 645
BpiI GAAGAC 2 cut(s) 909, 2199
BplI GAGNNNNNCTC 2 cut(s) 2033, 2065
Bpu10I CCTNAGC 2 cut(s) 660, 2459
Bpu1102I GCTNAGC 1 cut(s) 2280
BpuMI CCSGG 1 cut(s) 84
BsaAI YACGTR 2 cut(s) 734, 1418
BsaBI GATNNNNATC 2 cut(s) 1376, 2313
BsaHI GRCGYC 1 cut(s) 155
BsaI GGTCTC 1 cut(s) 1892
BsaJI CCNNGG 3 cut(s) 66, 1834, 2028
BsaWI WCCGGW 3 cut(s) 43, 511, 625
BsaXI ACNNNNNCTCC 2 cut(s) 341, 371
Bsc4I CCNNNNNNNGG 4 cut(s) 1916, 2326, 2426, 2474
Bse118I RCCGGY 1 cut(s) 2451
Bse1I ACTGG 6 cut(s) 53, 651, 891, 1058, 1440, 2234
Bse3DI GCAATG 2 cut(s) 920, 2208
Bse8I GATNNNNATC 2 cut(s) 1376, 2313
BseAI TCCGGA 1 cut(s) 625
BseBI CCWGG 3 cut(s) 67, 2198, 2327
BseDI CCNNGG 3 cut(s) 66, 1834, 2028
BseGI GGATG 9 cut(s) 140, 466, 548, 775, 1467, 1663, 1713, 2164, 2308
BseJI GATNNNNATC 2 cut(s) 1376, 2313
BseLI CCNNNNNNNGG 4 cut(s) 1916, 2326, 2426, 2474
BseMI GCAATG 2 cut(s) 920, 2208
BseMII CTCAG 6 cut(s) 6, 651, 783, 1833, 1959, 2271
BseNI ACTGG 6 cut(s) 53, 651, 891, 1058, 1440, 2234
BseRI GAGGAG 5 cut(s) 314, 356, 1000, 1676, 2177
BseSI GKGCMC 1 cut(s) 2521
BseXI GCAGC 6 cut(s) 1552, 1577, 1694, 1985, 2013, 2073
BseYI CCCAGC 2 cut(s) 925, 1441
BsgI GTGCAG 2 cut(s) 1701, 1881
Bsh1236I CGCG 1 cut(s) 508
Bsh1285I CGRYCG 2 cut(s) 1810, 2015
BshFI GGCC 4 cut(s) 1205, 1792, 1909, 1923
BshNI GGYRCC 2 cut(s) 887, 2516
BsiEI CGRYCG 2 cut(s) 1810, 2015
BsiHKAI GWGCWC 3 cut(s) 527, 2286, 2426
BsiSI CCGG 5 cut(s) 44, 84, 512, 626, 2452
BsiWI CGTACG 1 cut(s) 734
BslFI GGGAC 7 cut(s) 190, 646, 1511, 1852, 2034, 2440, 2487
BslI CCNNNNNNNGG 4 cut(s) 1916, 2326, 2426, 2474
BsmAI GTCTC 2 cut(s) 1892, 1964
BsmFI GGGAC 7 cut(s) 190, 646, 1511, 1852, 2034, 2440, 2487
BsmI GAATGC 1 cut(s) 2463
BsnI GGCC 4 cut(s) 1205, 1792, 1909, 1923
Bso31I GGTCTC 1 cut(s) 1892
Bsp1286I GDGCHC 4 cut(s) 527, 2286, 2426, 2521
Bsp13I TCCGGA 1 cut(s) 625
Bsp1407I TGTACA 2 cut(s) 444, 723
Bsp143I GATC 8 cut(s) 691, 1054, 1356, 1627, 1772, 1807, 2012, 2329
Bsp1720I GCTNAGC 1 cut(s) 2280
Bsp19I CCATGG 1 cut(s) 1834
BspACI CCGC 6 cut(s) 25, 149, 152, 182, 225, 885
BspANI GGCC 4 cut(s) 1205, 1792, 1909, 1923
BspCNI CTCAG 6 cut(s) 7, 652, 784, 1834, 1960, 2272
BspEI TCCGGA 1 cut(s) 625
BspFNI CGCG 1 cut(s) 508
BspHI TCATGA 1 cut(s) 1368
BspMAI CTGCAG 1 cut(s) 2003
BspMI ACCTGC 1 cut(s) 2032
BspPI GGATC 4 cut(s) 1049, 1622, 1780, 2337
BspT107I GGYRCC 2 cut(s) 887, 2516
BspTI CTTAAG 2 cut(s) 1312, 2261
BspTNI GGTCTC 1 cut(s) 1892
BsrDI GCAATG 2 cut(s) 920, 2208
BsrFI RCCGGY 1 cut(s) 2451
BsrGI TGTACA 2 cut(s) 444, 723
BsrI ACTGG 6 cut(s) 53, 651, 891, 1058, 1440, 2234
BssAI RCCGGY 1 cut(s) 2451
BssECI CCNNGG 3 cut(s) 66, 1834, 2028
BssMI GATC 8 cut(s) 691, 1054, 1356, 1627, 1772, 1807, 2012, 2329
BssNI GRCGYC 1 cut(s) 155
BssSI CACGAG 1 cut(s) 1633
BssT1I CCWWGG 2 cut(s) 1834, 2028
Bst2BI CACGAG 1 cut(s) 1633
Bst2UI CCWGG 3 cut(s) 67, 2198, 2327
Bst6I CTCTTC 4 cut(s) 1996, 2064, 2136, 2178
BstACI GRCGYC 1 cut(s) 155
BstAFI CTTAAG 2 cut(s) 1312, 2261
BstAPI GCANNNNNTGC 2 cut(s) 1418, 1574
BstAUI TGTACA 2 cut(s) 444, 723
BstBAI YACGTR 2 cut(s) 734, 1418
BstC8I GCNNGC 5 cut(s) 667, 671, 841, 1680, 2258
BstDSI CCRYGG 1 cut(s) 1834
BstF5I GGATG 9 cut(s) 140, 466, 548, 775, 1467, 1663, 1713, 2164, 2308
BstFNI CGCG 1 cut(s) 508
BstH2I RGCGCY 1 cut(s) 1905
BstHHI GCGC 2 cut(s) 1904, 2256
BstKTI GATC 8 cut(s) 694, 1057, 1359, 1630, 1775, 1810, 2015, 2332
BstMAI GTCTC 2 cut(s) 1892, 1964
BstMBI GATC 8 cut(s) 691, 1054, 1356, 1627, 1772, 1807, 2012, 2329
BstMCI CGRYCG 2 cut(s) 1810, 2015
BstMWI GCNNNNNNNGC 3 cut(s) 894, 1418, 1574
BstNI CCWGG 3 cut(s) 67, 2198, 2327
BstNSI RCATGY 1 cut(s) 843
BstSCI CCNGG 4 cut(s) 65, 82, 2196, 2325
BstSFI CTRYAG 2 cut(s) 1776, 1999
BstSLI GKGCMC 1 cut(s) 2521
BstUI CGCG 1 cut(s) 508
BstV1I GCAGC 6 cut(s) 1552, 1577, 1694, 1985, 2013, 2073
BstV2I GAAGAC 2 cut(s) 909, 2199
BstX2I RGATCY 3 cut(s) 1054, 1772, 2329
BstYI RGATCY 3 cut(s) 1054, 1772, 2329
BsuI GTATCC 1 cut(s) 2219
BsuRI GGCC 4 cut(s) 1205, 1792, 1909, 1923
BtgI CCRYGG 1 cut(s) 1834
BtgZI GCGATG 1 cut(s) 2079
BtsCI GGATG 9 cut(s) 140, 466, 548, 775, 1467, 1663, 1713, 2164, 2308
BtsI GCAGTG 2 cut(s) 1864, 2104
BtsIMutI CAGTG 7 cut(s) 898, 1065, 1433, 1864, 2104, 2160, 2531
BveI ACCTGC 1 cut(s) 2032
Cac8I GCNNGC 5 cut(s) 667, 671, 841, 1680, 2258
CaiI CAGNNNCTG 3 cut(s) 897, 1163, 2326
CciI TCATGA 1 cut(s) 1368
CfoI GCGC 2 cut(s) 1904, 2256
Cfr10I RCCGGY 1 cut(s) 2451
Cfr13I GGNCC 9 cut(s) 80, 809, 1190, 1438, 1908, 1922, 2021, 2454, 2501
CseI GACGC 3 cut(s) 144, 497, 1169
Csp6I GTAC 9 cut(s) 445, 710, 724, 735, 796, 875, 1173, 1415, 1465
CspCI CAANNNNNGTGG 2 cut(s) 1900, 1935
CviQI GTAC 9 cut(s) 445, 710, 724, 735, 796, 875, 1173, 1415, 1465
DpnI GATC 8 cut(s) 693, 1056, 1358, 1629, 1774, 1809, 2014, 2331
DpnII GATC 8 cut(s) 691, 1054, 1356, 1627, 1772, 1807, 2012, 2329
DraIII CACNNNGTG 1 cut(s) 1229
DrdI GACNNNNNNGTC 2 cut(s) 87, 392
DseDI GACNNNNNNGTC 2 cut(s) 87, 392
EaeI YGGCCR 1 cut(s) 1203
Eam1104I CTCTTC 4 cut(s) 1996, 2064, 2136, 2178
EarI CTCTTC 4 cut(s) 1996, 2064, 2136, 2178
EciI GGCGGA 1 cut(s) 197
Ecl136II GAGCTC 1 cut(s) 525
Eco130I CCWWGG 2 cut(s) 1834, 2028
Eco24I GRGCYC 1 cut(s) 527
Eco31I GGTCTC 1 cut(s) 1892
Eco32I GATATC 1 cut(s) 957
Eco47I GGWCC 7 cut(s) 80, 809, 1190, 1438, 2021, 2454, 2501
Eco47III AGCGCT 1 cut(s) 1903
Eco53kI GAGCTC 1 cut(s) 525
Eco57I CTGAAG 2 cut(s) 1862, 2057
EcoICRI GAGCTC 1 cut(s) 525
EcoO109I RGGNCCY 2 cut(s) 2021, 2501
EcoRI GAATTC 2 cut(s) 122, 846
EcoRII CCWGG 3 cut(s) 65, 2196, 2325
EcoRV GATATC 1 cut(s) 957
EcoT14I CCWWGG 2 cut(s) 1834, 2028
EcoT38I GRGCYC 1 cut(s) 527
ErhI CCWWGG 2 cut(s) 1834, 2028
FalI AAGNNNNNCTT 2 cut(s) 1860, 1892
FaqI GGGAC 7 cut(s) 190, 646, 1511, 1852, 2034, 2440, 2487
FauI CCCGC 1 cut(s) 232
FauNDI CATATG 2 cut(s) 675, 978
FblI GTMKAC 2 cut(s) 164, 2168
Fnu4HI GCNGC 9 cut(s) 150, 153, 886, 1566, 1591, 1683, 1999, 2002, 2062
FokI GGATG 9 cut(s) 147, 473, 555, 782, 1454, 1670, 1720, 2171, 2315
FriOI GRGCYC 1 cut(s) 527
Fsp4HI GCNGC 9 cut(s) 150, 153, 886, 1566, 1591, 1683, 1999, 2002, 2062
FspBI CTAG 2 cut(s) 1740, 2346
GlaI GCGC 2 cut(s) 1903, 2255
GluI GCNGC 9 cut(s) 150, 153, 886, 1566, 1591, 1683, 1999, 2002, 2062
GsaI CCCAGC 2 cut(s) 929, 1445
HaeII RGCGCY 1 cut(s) 1905
HaeIII GGCC 4 cut(s) 1205, 1792, 1909, 1923
HapII CCGG 5 cut(s) 44, 84, 512, 626, 2452
HgaI GACGC 3 cut(s) 144, 497, 1169
HhaI GCGC 2 cut(s) 1904, 2256
Hin1I GRCGYC 1 cut(s) 155
Hin6I GCGC 2 cut(s) 1902, 2254
HinP1I GCGC 2 cut(s) 1902, 2254
HincII GTYRAC 3 cut(s) 165, 575, 1552
HindII GTYRAC 3 cut(s) 165, 575, 1552
HindIII AAGCTT 1 cut(s) 2258
HpaII CCGG 5 cut(s) 44, 84, 512, 626, 2452
HphI GGTGA 1 cut(s) 1998
Hpy166II GTNNAC 7 cut(s) 165, 575, 710, 1115, 1309, 1552, 2169
Hpy188III TCNNGA 8 cut(s) 74, 565, 626, 851, 1250, 1369, 1490, 1723
Hpy8I GTNNAC 7 cut(s) 165, 575, 710, 1115, 1309, 1552, 2169
Hpy99I CGWCG 2 cut(s) 169, 245
HpyCH4IV ACGT 4 cut(s) 600, 733, 1417, 2211
HpyF10VI GCNNNNNNNGC 3 cut(s) 894, 1418, 1574
HpySE526I ACGT 4 cut(s) 600, 733, 1417, 2211
Hsp92I GRCGYC 1 cut(s) 155
HspAI GCGC 2 cut(s) 1902, 2254
KflI GGGWCCC 1 cut(s) 2501
Kpn2I TCCGGA 1 cut(s) 625
Kzo9I GATC 8 cut(s) 691, 1054, 1356, 1627, 1772, 1807, 2012, 2329
LmnI GCTCC 2 cut(s) 2032, 2251
Lsp1109I GCAGC 6 cut(s) 1552, 1577, 1694, 1985, 2013, 2073
LweI GCATC 5 cut(s) 220, 533, 772, 1528, 1753
MaeI CTAG 2 cut(s) 1740, 2346
MaeII ACGT 4 cut(s) 600, 733, 1417, 2211
MaeIII GTNAC 2 cut(s) 868, 1645
MalI GATC 8 cut(s) 693, 1056, 1358, 1629, 1774, 1809, 2014, 2331
MboI GATC 8 cut(s) 691, 1054, 1356, 1627, 1772, 1807, 2012, 2329
MflI RGATCY 3 cut(s) 1054, 1772, 2329
MhlI GDGCHC 4 cut(s) 527, 2286, 2426, 2521
MlsI TGGCCA 1 cut(s) 1205
MluI ACGCGT 1 cut(s) 506
MluNI TGGCCA 1 cut(s) 1205
MlyI GAGTC 6 cut(s) 16, 437, 500, 959, 2174, 2363
MmeI TCCRAC 1 cut(s) 175
Mox20I TGGCCA 1 cut(s) 1205
MroI TCCGGA 1 cut(s) 625
MroXI GAANNNNTTC 1 cut(s) 1305
MscI TGGCCA 1 cut(s) 1205
MseI TTAA 6 cut(s) 1313, 1320, 1536, 1898, 2111, 2262
MslI CAYNNNNRTG 2 cut(s) 452, 950
Msp20I TGGCCA 1 cut(s) 1205
MspA1I CMGCKG 3 cut(s) 227, 1106, 2087
MspCI CTTAAG 2 cut(s) 1312, 2261
MspI CCGG 5 cut(s) 44, 84, 512, 626, 2452
MspR9I CCNGG 4 cut(s) 67, 84, 2198, 2327
Mva1269I GAATGC 1 cut(s) 2463
MvaI CCWGG 3 cut(s) 67, 2198, 2327
MvnI CGCG 1 cut(s) 508
MwoI GCNNNNNNNGC 3 cut(s) 894, 1418, 1574
NciI CCSGG 1 cut(s) 84
NcoI CCATGG 1 cut(s) 1834
NdeI CATATG 2 cut(s) 675, 978
NdeII GATC 8 cut(s) 691, 1054, 1356, 1627, 1772, 1807, 2012, 2329
NmeAIII GCCGAG 1 cut(s) 30
NspI RCATGY 1 cut(s) 843
OliI CACNNNNGTG 1 cut(s) 950
PaeI GCATGC 1 cut(s) 843
PagI TCATGA 1 cut(s) 1368
PcsI WCGNNNNNNNCGW 2 cut(s) 152, 505
PctI GAATGC 1 cut(s) 2463
PdmI GAANNNNTTC 1 cut(s) 1305
PfeI GAWTC 8 cut(s) 863, 942, 970, 1215, 1286, 1799, 1873, 2081
Pfl23II CGTACG 1 cut(s) 734
PflMI CCANNNNNTGG 1 cut(s) 2326
PkrI GCNGC 9 cut(s) 151, 154, 887, 1567, 1592, 1684, 2000, 2003, 2063
Ple19I CGATCG 2 cut(s) 1810, 2015
PleI GAGTC 6 cut(s) 15, 436, 499, 959, 2173, 2362
PpsI GAGTC 6 cut(s) 15, 436, 499, 959, 2173, 2362
Ppu21I YACGTR 2 cut(s) 734, 1418
PpuMI RGGWCCY 2 cut(s) 2021, 2501
Psp124BI GAGCTC 1 cut(s) 527
Psp5II RGGWCCY 2 cut(s) 2021, 2501
Psp6I CCWGG 3 cut(s) 65, 2196, 2325
PspFI CCCAGC 2 cut(s) 925, 1441
PspGI CCWGG 3 cut(s) 65, 2196, 2325
PspLI CGTACG 1 cut(s) 734
PspPI GGNCC 9 cut(s) 80, 809, 1190, 1438, 1908, 1922, 2021, 2454, 2501
PspPPI RGGWCCY 2 cut(s) 2021, 2501
PsrI GAACNNNNNNTAC 2 cut(s) 1290, 1322
PstI CTGCAG 1 cut(s) 2003
PstNI CAGNNNCTG 3 cut(s) 897, 1163, 2326
PsuI RGATCY 3 cut(s) 1054, 1772, 2329
PvuI CGATCG 2 cut(s) 1810, 2015
PvuII CAGCTG 2 cut(s) 1106, 2087
RsaI GTAC 9 cut(s) 446, 711, 725, 736, 797, 876, 1174, 1416, 1466
RsaNI GTAC 9 cut(s) 445, 710, 724, 735, 796, 875, 1173, 1415, 1465
RseI CAYNNNNRTG 2 cut(s) 452, 950
SacI GAGCTC 1 cut(s) 527
SalI GTCGAC 1 cut(s) 163
SaqAI TTAA 6 cut(s) 1313, 1320, 1536, 1898, 2111, 2262
SatI GCNGC 9 cut(s) 150, 153, 886, 1566, 1591, 1683, 1999, 2002, 2062
Sau3AI GATC 8 cut(s) 691, 1054, 1356, 1627, 1772, 1807, 2012, 2329
Sau96I GGNCC 9 cut(s) 80, 809, 1190, 1438, 1908, 1922, 2021, 2454, 2501
ScaI AGTACT 2 cut(s) 876, 1174
SchI GAGTC 6 cut(s) 16, 437, 500, 959, 2174, 2363
ScrFI CCNGG 4 cut(s) 67, 84, 2198, 2327
SduI GDGCHC 4 cut(s) 527, 2286, 2426, 2521
SfaNI GCATC 5 cut(s) 220, 533, 772, 1528, 1753
SfcI CTRYAG 2 cut(s) 1776, 1999
SinI GGWCC 7 cut(s) 80, 809, 1190, 1438, 2021, 2454, 2501
SmiMI CAYNNNNRTG 2 cut(s) 452, 950
SmlI CTYRAG 2 cut(s) 1312, 2261
SmoI CTYRAG 2 cut(s) 1312, 2261
SphI GCATGC 1 cut(s) 843
SsiI CCGC 6 cut(s) 25, 149, 152, 182, 225, 885
SspMI CTAG 2 cut(s) 1740, 2346
SstI GAGCTC 1 cut(s) 527
StyD4I CCNGG 4 cut(s) 65, 82, 2196, 2325
StyI CCWWGG 2 cut(s) 1834, 2028
TaiI ACGT 4 cut(s) 603, 736, 1420, 2214
TaqI TCGA 9 cut(s) 73, 164, 499, 553, 850, 968, 1169, 1355, 1806
TatI WGTACW 6 cut(s) 444, 723, 795, 874, 1172, 1464
TauI GCSGC 3 cut(s) 152, 155, 888
TfiI GAWTC 8 cut(s) 863, 942, 970, 1215, 1286, 1799, 1873, 2081
Tru1I TTAA 6 cut(s) 1313, 1320, 1536, 1898, 2111, 2262
Tru9I TTAA 6 cut(s) 1313, 1320, 1536, 1898, 2111, 2262
TscAI CASTG 7 cut(s) 898, 1065, 1440, 1864, 2104, 2160, 2531
TseI GCWGC 6 cut(s) 1565, 1590, 1682, 1998, 2001, 2061
TspGWI ACGGA 4 cut(s) 398, 871, 1586, 2264
TspRI CASTG 7 cut(s) 898, 1065, 1440, 1864, 2104, 2160, 2531
Van91I CCANNNNNTGG 1 cut(s) 2326
Vha464I CTTAAG 2 cut(s) 1312, 2261
VpaK11BI GGWCC 7 cut(s) 80, 809, 1190, 1438, 2021, 2454, 2501
XapI RAATTY 2 cut(s) 122, 846
XceI RCATGY 1 cut(s) 843
XcmI CCANNNNNNNNNTGG 1 cut(s) 2302
XmiI GTMKAC 2 cut(s) 164, 2168
XmnI GAANNNNTTC 1 cut(s) 1305
XspI CTAG 2 cut(s) 1740, 2346
ZrmI AGTACT 2 cut(s) 876, 1174
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.