Rmu_sc0000577.1_g000007

No description available

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000577.1
Physical Location & Seq
Forward (+)
13907 .. 16950
3044 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000577.1_g000007.1.cds

Sequence Viewer

Length: 1506 bp
atgtctcggtgttttccttaccctcctcccgggtatgtgaagaaggggatctgcgatgaggctttgatcgaaccgattaagctccaaggagaagctgagaaggccaagaaagaaaagaagagagagaaaaaacgagagaagaaagaaaagaaggctagagaaaatggggaggttgaagacaagaagcaccatcacaaaaaagggaacaaagatgaaaggcagcaagaagatgagaaagtcagggaacatggcaagaagagagaacgtgaagaagctgaaattctggacatgagtaccctaacggaagagcatccagttggttcccagaattcttctgacagtacccttaacagcaataacagcaacaaaaggcagaagcagaacttgtctcctgagtgcaggcaaaataccgggagcattcttcgtatccggttgcctctccaaaggcacaaagatcaagaagtgctactgagagaggaattgccttcccggttgcctccccacaggaacaatgctccagaggaacagctttttcggttgcctctccaaaggaccaatgctccagaagtttctcctagagagaaactgcctagccggttgcctcttcaaagaaacaaagattcagcattgttacccaaagaggtacagccttgcaggttgcctctacaaaggaacaaacatctggaagtgttacccaaagaggaacgaccctgcaggttgcctctacaaaggaacaaacatctggaagtattgcccaaagaggaacaacccagcaggttgcctcttaagacacagaaagaaccaccagtgctagctcgagagaaacagcattctcttaaaaggcaaaaggatcaagatgttctacccaaagagaaaaagacttgcctgttgtctctccaaaggaccaaggattcagaagtattacccagggagaaacaacagcctagccagctgcctctccaagcgaacaaagatcgaaaaatagtacccagggagaaacagcttagccagttacctctccaaaggaacaaggatcctgcagtgccatctagagaggaacagcccagccagttgcttctccaaaagcagaaagttccacaagtgctgctcagagaagaacagccgtgttctgtctctggaaggactgctgatgcctctgttcaaggtaggtgtgaacctgctcctgtacttggaagggatgagggagaaaaaccctgttctacttctggaattgagggcacagaaaaccgaaaaagcaagcgaagagcatcacaatacatagagctatttgagaaatgggttgagcctccgcttttattaagtttaccacccacagatattgatgatgatcagggatggttgcttaagacgaataagaacccaaaccttgagaaatgtgttgttgccggtgacagtttgagctgtggagactcggtgtcctggccacgtgctcgcctcttgcctgaggttgatatatatgctttgccatataccgtaccattttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

501

Amino Acids

57.77

Weight (kDa)

9.4

Isoelectric Point (pI)

74.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 4 cut(s) 645, 705, 765, 1186
AciI CCGC 1 cut(s) 1310
AclWI GGATC 4 cut(s) 56, 858, 1028, 1041
AcoI YGGCCR 1 cut(s) 1442
AcsI RAATTY 2 cut(s) 279, 328
AcvI CACGTG 1 cut(s) 1448
AfaI GTAC 6 cut(s) 295, 343, 645, 987, 1188, 1497
AfiI CCNNNNNNNGG 2 cut(s) 29, 1190
AflII CTTAAG 2 cut(s) 785, 1364
AgsI TTSAA 3 cut(s) 176, 608, 1163
AhdI GACNNNNNGTC 1 cut(s) 1435
AjnI CCWGG 3 cut(s) 926, 989, 1439
AluBI AGCT 9 cut(s) 82, 95, 275, 529, 815, 952, 1003, 1285, 1422
AluI AGCT 9 cut(s) 82, 95, 275, 529, 815, 952, 1003, 1285, 1422
Alw21I GWGCWC 1 cut(s) 1453
Alw26I GTCTC 5 cut(s) 9, 393, 897, 1138, 1422
AlwI GGATC 4 cut(s) 56, 858, 1028, 1041
Ama87I CYCGRG 2 cut(s) 29, 816
AoxI GGCC 2 cut(s) 102, 1442
ApeKI GCWGC 3 cut(s) 220, 952, 1105
ApoI RAATTY 2 cut(s) 279, 328
AspS9I GGNCC 2 cut(s) 552, 903
AsuC2I CCSGG 4 cut(s) 30, 31, 412, 490
AsuHPI GGTGA 1 cut(s) 1421
AsuNHI GCTAGC 1 cut(s) 811
AvaI CYCGRG 2 cut(s) 29, 816
AvaII GGWCC 2 cut(s) 552, 903
AxyI CCTNAGG 1 cut(s) 1464
BaeGI GKGCMC 1 cut(s) 1241
BaeI ACNNNNGTAYC 2 cut(s) 277, 310
BalI TGGCCA 1 cut(s) 1444
BamHI GGATCC 1 cut(s) 1033
BbrPI CACGTG 1 cut(s) 1448
BbsI GAAGAC 1 cut(s) 183
Bbv12I GWGCWC 1 cut(s) 1453
BbvI GCAGC 3 cut(s) 232, 939, 1092
BccI CCATC 3 cut(s) 198, 1054, 1350
BceAI ACGGC 1 cut(s) 1108
BciT130I CCWGG 3 cut(s) 928, 991, 1441
BciVI GTATCC 1 cut(s) 437
BclI TGATCA 1 cut(s) 1348
BcnI CCSGG 4 cut(s) 30, 31, 412, 490
BcoDI GTCTC 5 cut(s) 9, 393, 897, 1138, 1422
BfaI CTAG 6 cut(s) 156, 576, 591, 812, 945, 1050
BfmI CTRYAG 2 cut(s) 712, 1038
BfrI CTTAAG 2 cut(s) 785, 1364
BfuAI ACCTGC 4 cut(s) 645, 705, 765, 1186
BfuI GTATCC 1 cut(s) 437
BisI GCNGC 3 cut(s) 221, 953, 1106
BlpI GCTNAGC 1 cut(s) 1004
BlsI GCNGC 3 cut(s) 222, 954, 1107
Bme1390I CCNGG 7 cut(s) 30, 31, 412, 490, 928, 991, 1441
Bme18I GGWCC 2 cut(s) 552, 903
BmeRI GACNNNNNGTC 1 cut(s) 1435
BmeT110I CYCGRG 2 cut(s) 29, 816
BmgT120I GGNCC 2 cut(s) 552, 903
BmiI GGNNCC 2 cut(s) 322, 1035
BmrFI CCNGG 7 cut(s) 30, 31, 412, 490, 928, 991, 1441
BmsI GCATC 3 cut(s) 319, 1141, 1277
BmtI GCTAGC 1 cut(s) 815
BpiI GAAGAC 1 cut(s) 183
BpmI CTGGAG 2 cut(s) 501, 546
Bpu1102I GCTNAGC 1 cut(s) 1004
BpuEI CTTGAG 1 cut(s) 1409
BpuMI CCSGG 4 cut(s) 30, 31, 412, 490
BsaAI YACGTR 1 cut(s) 1448
BsaBI GATNNNNATC 1 cut(s) 1347
BsaJI CCNNGG 7 cut(s) 29, 85, 906, 926, 927, 989, 990
BsaWI WCCGGW 1 cut(s) 429
BsaXI ACNNNNNCTCC 4 cut(s) 544, 574, 1419, 1449
Bsc4I CCNNNNNNNGG 2 cut(s) 29, 1190
Bse118I RCCGGY 2 cut(s) 594, 1406
Bse1I ACTGG 4 cut(s) 314, 806, 1009, 1069
Bse21I CCTNAGG 1 cut(s) 1464
Bse8I GATNNNNATC 1 cut(s) 1347
BseBI CCWGG 3 cut(s) 928, 991, 1441
BseDI CCNNGG 7 cut(s) 29, 85, 906, 926, 927, 989, 990
BseGI GGATG 3 cut(s) 310, 1204, 1361
BseJI GATNNNNATC 1 cut(s) 1347
BseLI CCNNNNNNNGG 2 cut(s) 29, 1190
BseMII CTCAG 5 cut(s) 87, 384, 461, 1123, 1455
BseNI ACTGG 4 cut(s) 314, 806, 1009, 1069
BseRI GAGGAG 1 cut(s) 15
BseSI GKGCMC 1 cut(s) 1241
BseXI GCAGC 3 cut(s) 232, 939, 1092
BseYI CCCAGC 2 cut(s) 770, 1064
BsgI GTGCAG 1 cut(s) 418
BshFI GGCC 2 cut(s) 104, 1444
BsiHKAI GWGCWC 1 cut(s) 1453
BsiHKCI CYCGRG 2 cut(s) 29, 816
BsiSI CCGG 6 cut(s) 30, 411, 430, 490, 595, 1407
BslI CCNNNNNNNGG 2 cut(s) 29, 1190
BsmAI GTCTC 5 cut(s) 9, 393, 897, 1138, 1422
BsmI GAATGC 2 cut(s) 417, 829
BsnI GGCC 2 cut(s) 104, 1444
BsoBI CYCGRG 2 cut(s) 29, 816
Bsp1286I GDGCHC 2 cut(s) 1241, 1453
Bsp143I GATC 7 cut(s) 48, 66, 454, 850, 973, 1033, 1348
Bsp1720I GCTNAGC 1 cut(s) 1004
BspACI CCGC 1 cut(s) 1310
BspANI GGCC 2 cut(s) 104, 1444
BspCNI CTCAG 5 cut(s) 88, 385, 462, 1122, 1456
BspLI GGNNCC 2 cut(s) 322, 1035
BspMAI CTGCAG 2 cut(s) 716, 1042
BspMI ACCTGC 4 cut(s) 645, 705, 765, 1186
BspOI GCTAGC 1 cut(s) 815
BspPI GGATC 4 cut(s) 56, 858, 1028, 1041
BspQI GCTCTTC 2 cut(s) 300, 1258
BspTI CTTAAG 2 cut(s) 785, 1364
BsrFI RCCGGY 2 cut(s) 594, 1406
BsrI ACTGG 4 cut(s) 314, 806, 1009, 1069
BssAI RCCGGY 2 cut(s) 594, 1406
BssECI CCNNGG 7 cut(s) 29, 85, 906, 926, 927, 989, 990
BssMI GATC 7 cut(s) 48, 66, 454, 850, 973, 1033, 1348
BssT1I CCWWGG 2 cut(s) 85, 906
Bst2UI CCWGG 3 cut(s) 928, 991, 1441
Bst4CI ACNGT 3 cut(s) 341, 1415, 1495
Bst6I CTCTTC 5 cut(s) 113, 251, 300, 609, 1258
BstAFI CTTAAG 2 cut(s) 785, 1364
BstBAI YACGTR 1 cut(s) 1448
BstC8I GCNNGC 5 cut(s) 401, 813, 950, 1259, 1453
BstDEI CTNAG 6 cut(s) 96, 393, 470, 1004, 1109, 1464
BstF5I GGATG 3 cut(s) 310, 1204, 1361
BstKTI GATC 7 cut(s) 51, 69, 457, 853, 976, 1036, 1351
BstMAI GTCTC 5 cut(s) 9, 393, 897, 1138, 1422
BstMBI GATC 7 cut(s) 48, 66, 454, 850, 973, 1033, 1348
BstMWI GCNNNNNNNGC 3 cut(s) 101, 360, 949
BstNI CCWGG 3 cut(s) 928, 991, 1441
BstSCI CCNGG 7 cut(s) 28, 29, 410, 488, 926, 989, 1439
BstSFI CTRYAG 2 cut(s) 712, 1038
BstSLI GKGCMC 1 cut(s) 1241
BstV1I GCAGC 3 cut(s) 232, 939, 1092
BstV2I GAAGAC 1 cut(s) 183
BstX2I RGATCY 2 cut(s) 48, 1033
BstYI RGATCY 2 cut(s) 48, 1033
Bsu36I CCTNAGG 1 cut(s) 1464
BsuI GTATCC 1 cut(s) 437
BsuRI GGCC 2 cut(s) 104, 1444
BtgZI GCGATG 1 cut(s) 69
BtsCI GGATG 3 cut(s) 310, 1204, 1361
BtsI GCAGTG 1 cut(s) 1047
BtsIMutI CAGTG 2 cut(s) 813, 1047
BveI ACCTGC 4 cut(s) 645, 705, 765, 1186
Cac8I GCNNGC 5 cut(s) 401, 813, 950, 1259, 1453
Cfr10I RCCGGY 2 cut(s) 594, 1406
Cfr13I GGNCC 2 cut(s) 552, 903
Cfr9I CCCGGG 1 cut(s) 29
Csp6I GTAC 6 cut(s) 294, 342, 644, 986, 1187, 1496
CspCI CAANNNNNGTGG 2 cut(s) 1321, 1356
CviAII CATG 2 cut(s) 248, 289
CviQI GTAC 6 cut(s) 294, 342, 644, 986, 1187, 1496
DdeI CTNAG 6 cut(s) 96, 393, 470, 1004, 1109, 1464
DpnI GATC 7 cut(s) 50, 68, 456, 852, 975, 1035, 1350
DpnII GATC 7 cut(s) 48, 66, 454, 850, 973, 1033, 1348
DriI GACNNNNNGTC 1 cut(s) 1435
EaeI YGGCCR 1 cut(s) 1442
Eam1104I CTCTTC 5 cut(s) 113, 251, 300, 609, 1258
Eam1105I GACNNNNNGTC 1 cut(s) 1435
EarI CTCTTC 5 cut(s) 113, 251, 300, 609, 1258
Eco130I CCWWGG 2 cut(s) 85, 906
Eco47I GGWCC 2 cut(s) 552, 903
Eco72I CACGTG 1 cut(s) 1448
Eco81I CCTNAGG 1 cut(s) 1464
Eco88I CYCGRG 2 cut(s) 29, 816
EcoRI GAATTC 1 cut(s) 328
EcoRII CCWGG 3 cut(s) 926, 989, 1439
EcoT14I CCWWGG 2 cut(s) 85, 906
ErhI CCWWGG 2 cut(s) 85, 906
FaeI CATG 2 cut(s) 251, 292
FaiI YATR 9 cut(s) 36, 249, 290, 1280, 1475, 1477, 1479, 1489, 1491
FalI AAGNNNNNCTT 2 cut(s) 368, 400
FatI CATG 2 cut(s) 247, 288
FbaI TGATCA 1 cut(s) 1348
Fnu4HI GCNGC 3 cut(s) 221, 953, 1106
FokI GGATG 3 cut(s) 297, 1211, 1368
Fsp4HI GCNGC 3 cut(s) 221, 953, 1106
FspBI CTAG 6 cut(s) 156, 576, 591, 812, 945, 1050
GluI GCNGC 3 cut(s) 221, 953, 1106
GsaI CCCAGC 2 cut(s) 774, 1068
GsuI CTGGAG 2 cut(s) 501, 546
HaeIII GGCC 2 cut(s) 104, 1444
HapII CCGG 6 cut(s) 30, 411, 430, 490, 595, 1407
Hin1II CATG 2 cut(s) 251, 292
HinfI GANTC 3 cut(s) 620, 911, 1430
HpaII CCGG 6 cut(s) 30, 411, 430, 490, 595, 1407
HphI GGTGA 1 cut(s) 1421
Hpy166II GTNNAC 2 cut(s) 1175, 1325
Hpy188I TCNGA 3 cut(s) 337, 916, 1112
Hpy8I GTNNAC 2 cut(s) 1175, 1325
HpyAV CCTTC 6 cut(s) 37, 94, 145, 495, 1134, 1188
HpyCH4III ACNGT 3 cut(s) 341, 1415, 1495
HpyCH4IV ACGT 2 cut(s) 265, 1447
HpyCH4V TGCA 4 cut(s) 399, 654, 714, 1040
HpyF10VI GCNNNNNNNGC 3 cut(s) 101, 360, 949
HpyF3I CTNAG 6 cut(s) 96, 393, 470, 1004, 1109, 1464
HpySE526I ACGT 2 cut(s) 265, 1447
Hsp92II CATG 2 cut(s) 251, 292
Ksp22I TGATCA 1 cut(s) 1348
Kzo9I GATC 7 cut(s) 48, 66, 454, 850, 973, 1033, 1348
LguI GCTCTTC 2 cut(s) 300, 1258
LmnI GCTCC 5 cut(s) 87, 414, 520, 565, 1186
Lsp1109I GCAGC 3 cut(s) 232, 939, 1092
LweI GCATC 3 cut(s) 319, 1141, 1277
MaeI CTAG 6 cut(s) 156, 576, 591, 812, 945, 1050
MaeII ACGT 2 cut(s) 265, 1447
MaeIII GTNAC 4 cut(s) 630, 690, 1011, 1409
MalI GATC 7 cut(s) 50, 68, 456, 852, 975, 1035, 1350
MboI GATC 7 cut(s) 48, 66, 454, 850, 973, 1033, 1348
MflI RGATCY 2 cut(s) 48, 1033
MhlI GDGCHC 2 cut(s) 1241, 1453
MlsI TGGCCA 1 cut(s) 1444
MluCI AATT 4 cut(s) 279, 328, 479, 1230
MluNI TGGCCA 1 cut(s) 1444
MlyI GAGTC 1 cut(s) 1424
Mox20I TGGCCA 1 cut(s) 1444
MscI TGGCCA 1 cut(s) 1444
MseI TTAA 7 cut(s) 78, 348, 786, 837, 1319, 1365, 1504
Msp20I TGGCCA 1 cut(s) 1444
MspA1I CMGCKG 1 cut(s) 952
MspCI CTTAAG 2 cut(s) 785, 1364
MspI CCGG 6 cut(s) 30, 411, 430, 490, 595, 1407
MspR9I CCNGG 7 cut(s) 30, 31, 412, 490, 928, 991, 1441
Mva1269I GAATGC 2 cut(s) 417, 829
MvaI CCWGG 3 cut(s) 928, 991, 1441
MwoI GCNNNNNNNGC 3 cut(s) 101, 360, 949
NciI CCSGG 4 cut(s) 30, 31, 412, 490
NdeII GATC 7 cut(s) 48, 66, 454, 850, 973, 1033, 1348
NheI GCTAGC 1 cut(s) 811
NlaIII CATG 2 cut(s) 251, 292
NlaIV GGNNCC 2 cut(s) 322, 1035
NmuCI GTSAC 1 cut(s) 1409
PaeR7I CTCGAG 1 cut(s) 816
PasI CCCWGGG 2 cut(s) 927, 990
PciSI GCTCTTC 2 cut(s) 300, 1258
PctI GAATGC 2 cut(s) 417, 829
PfeI GAWTC 2 cut(s) 620, 911
PkrI GCNGC 3 cut(s) 222, 954, 1107
PleI GAGTC 1 cut(s) 1424
PmaCI CACGTG 1 cut(s) 1448
PmlI CACGTG 1 cut(s) 1448
PpsI GAGTC 1 cut(s) 1424
Ppu21I YACGTR 1 cut(s) 1448
Psp6I CCWGG 3 cut(s) 926, 989, 1439
PspCI CACGTG 1 cut(s) 1448
PspFI CCCAGC 2 cut(s) 770, 1064
PspGI CCWGG 3 cut(s) 926, 989, 1439
PspN4I GGNNCC 2 cut(s) 322, 1035
PspPI GGNCC 2 cut(s) 552, 903
PstI CTGCAG 2 cut(s) 716, 1042
PsuI RGATCY 2 cut(s) 48, 1033
PvuII CAGCTG 1 cut(s) 952
RsaI GTAC 6 cut(s) 295, 343, 645, 987, 1188, 1497
RsaNI GTAC 6 cut(s) 294, 342, 644, 986, 1187, 1496
SapI GCTCTTC 2 cut(s) 300, 1258
SaqAI TTAA 7 cut(s) 78, 348, 786, 837, 1319, 1365, 1504
SatI GCNGC 3 cut(s) 221, 953, 1106
Sau3AI GATC 7 cut(s) 48, 66, 454, 850, 973, 1033, 1348
Sau96I GGNCC 2 cut(s) 552, 903
SbfI CCTGCAGG 1 cut(s) 716
SchI GAGTC 1 cut(s) 1424
ScrFI CCNGG 7 cut(s) 30, 31, 412, 490, 928, 991, 1441
SdaI CCTGCAGG 1 cut(s) 716
SduI GDGCHC 2 cut(s) 1241, 1453
SfaNI GCATC 3 cut(s) 319, 1141, 1277
SfcI CTRYAG 2 cut(s) 712, 1038
Sfr274I CTCGAG 1 cut(s) 816
SinI GGWCC 2 cut(s) 552, 903
SlaI CTCGAG 1 cut(s) 816
SmaI CCCGGG 1 cut(s) 31
SmlI CTYRAG 4 cut(s) 785, 816, 1364, 1388
SmoI CTYRAG 4 cut(s) 785, 816, 1364, 1388
Sse8387I CCTGCAGG 1 cut(s) 716
Sse9I AATT 4 cut(s) 279, 328, 479, 1230
SsiI CCGC 1 cut(s) 1310
SspMI CTAG 6 cut(s) 156, 576, 591, 812, 945, 1050
StyD4I CCNGG 7 cut(s) 28, 29, 410, 488, 926, 989, 1439
StyI CCWWGG 2 cut(s) 85, 906
TaaI ACNGT 3 cut(s) 341, 1415, 1495
TaiI ACGT 2 cut(s) 268, 1450
TaqI TCGA 3 cut(s) 69, 817, 976
TasI AATT 4 cut(s) 279, 328, 479, 1230
TatI WGTACW 1 cut(s) 1186
TfiI GAWTC 2 cut(s) 620, 911
Tru1I TTAA 7 cut(s) 78, 348, 786, 837, 1319, 1365, 1504
Tru9I TTAA 7 cut(s) 78, 348, 786, 837, 1319, 1365, 1504
TscAI CASTG 2 cut(s) 813, 1047
TseFI GTSAC 1 cut(s) 1409
TseI GCWGC 3 cut(s) 220, 952, 1105
Tsp45I GTSAC 1 cut(s) 1409
TspDTI ATGAA 1 cut(s) 228
TspGWI ACGGA 1 cut(s) 317
TspMI CCCGGG 1 cut(s) 29
TspRI CASTG 2 cut(s) 813, 1047
Vha464I CTTAAG 2 cut(s) 785, 1364
VpaK11BI GGWCC 2 cut(s) 552, 903
XapI RAATTY 2 cut(s) 279, 328
XbaI TCTAGA 1 cut(s) 1049
XhoI CTCGAG 1 cut(s) 816
XmaI CCCGGG 1 cut(s) 29
XspI CTAG 6 cut(s) 156, 576, 591, 812, 945, 1050
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.